NO19G01070, NO19G01070 (gene) Nannochloropsis oceanica

Overview
NameNO19G01070
Unique NameNO19G01070
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length486
Alignment locationchr19:356136..356621 +

Link to JBrowse

Properties
Property NameValue
DescriptionProtein phosphatase inhibitor
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:356136..356621 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0032515negative regulation of phosphoprotein phosphatase activity
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0004865protein serine/threonine phosphatase inhibitor activity
GO:0030234enzyme regulator activity
Vocabulary: INTERPRO
TermDefinition
IPR011107PPI_Ypi1
Homology
BLAST of NO19G01070 vs. NCBI_GenBank
Match: EWM23608.1 (protein phosphatase inhibitor [Nannochloropsis gaditana])

HSP 1 Score: 131.3 bits (329), Expect = 2.600e-27
Identity = 125/162 (77.16%), Postives = 131/162 (80.86%), Query Frame = 0
Query:    1 MEAKNSGGPTSPNGGGRGSGSIGVVGGRGGHMQAKPSSTGSATVVEDKAAAKEG-EGGVLRLRLHPRPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHVAQPKHPPIKPHETYHA 162
            MEAK+S    S   G  GSG     G  G H QAKP S+GS TVVE+KAAAKEG E  VLRL+L PRPHVKWD+ V+DNEHMNKKSSKRCCIFHKKRAFGES  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AQPKH PIKPHETYHA
Sbjct:    1 MEAKDSTRARSSTDGD-GSG-----GNSGAHSQAKPISSGSRTVVEEKAAAKEGREDRVLRLQLDPRPHVKWDQDVVDNEHMNKKSSKRCCIFHKKRAFGES--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPKHLPIKPHETYHA 154          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: GAX16237.1 (hypothetical protein FisN_3Hu281 [Fistulifera solaris])

HSP 1 Score: 76.6 bits (187), Expect = 7.700e-11
Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 0
Query:   42 ATVVEDKAAAKEGEGGVLRLRLHPRPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGESS 103
            ATV E   A    +  VLRL L   P V+WDE ++DNE + +KSSKRCCIFHK+RAFGESS
Sbjct:   31 ATVTETVTATPSEQTEVLRLTLRAPPSVRWDESIVDNEGLGRKSSKRCCIFHKQRAFGESS 91          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: GAX96313.1 (protein phosphatase inhibitor [Pythium insidiosum])

HSP 1 Score: 76.3 bits (186), Expect = 1.000e-10
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 0
Query:   41 SATVVEDKAAAKEGEGGVLRLRLHPRPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGESS 103
            +AT +E+   A   E  V R++L PRPHV +DE V+D EH+ +K S +CCIFHKKRAFGESS
Sbjct:   12 AATAIEEPPVA-AAEPSVYRVQLQPRPHVTFDESVVDXEHLGRKKSNKCCIFHKKRAFGESS 72          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: OLP85840.1 (Cyclopropane-fatty-acyl-phospholipid synthase [Symbiodinium microadriaticum])

HSP 1 Score: 74.3 bits (181), Expect = 3.800e-10
Identity = 45/86 (52.33%), Postives = 54/86 (62.79%), Query Frame = 0
Query:   19 SGSIGVVGGRGGHMQAKPSSTGSATVVEDKAAAKEGEGGVLRLRLHPRP--HVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGESS 103
            SGS G     GG+     +ST +AT VE + ++     G L L L PRP  +V WD  V+DNEHMNKK SK+CCIF K RAFGESS
Sbjct:  283 SGSNGAPSSSGGY-----NSTQTATEVESQPSS--SSNGPLHLVLEPRPQHNVSWDASVVDNEHMNKKKSKKCCIFSKPRAFGESS 361          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: OEU08804.1 (PPI_Ypi1-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 73.9 bits (180), Expect = 5.000e-10
Identity = 35/45 (77.78%), Postives = 37/45 (82.22%), Query Frame = 0
Query:   58 VLRLRLHPRPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGESS 103
            VLRL L  RP+V WDE VIDNE M +KSSKRCCIFHK RAFGESS
Sbjct:   88 VLRLTLTSRPNVTWDEGVIDNEGMGRKSSKRCCIFHKARAFGESS 132          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: XP_008892129.1 (hypothetical protein PPTG_02662 [Phytophthora parasitica INRA-310] >ETI49804.1 hypothetical protein F443_06561 [Phytophthora parasitica P1569] >ETK89568.1 hypothetical protein L915_06430 [Phytophthora parasitica] >ETL42969.1 hypothetical protein L916_06376 [Phytophthora parasitica] >ETL96145.1 hypothetical protein L917_06244 [Phytophthora parasitica] >ETM49299.1 hypothetical protein L914_06357 [Phytophthora parasitica] >ETN22910.1 hypothetical protein PPTG_02662 [Phytophthora parasitica INRA-310] >ETO78360.1 hypothetical protein F444_06627 [Phytophthora parasitica P1976] >ETP19441.1 hypothetical protein F441_06566 [Phytophthora parasitica CJ01A1] >ETP47360.1 hypothetical protein F442_06605 [Phytophthora parasitica P10297] >KUF79998.1 hypothetical protein AM587_10017659 [Phytophthora nicotianae] >KUF98429.1 hypothetical protein AM588_10011534 [Phytophthora nicotianae])

HSP 1 Score: 71.6 bits (174), Expect = 2.500e-9
Identity = 30/48 (62.50%), Postives = 36/48 (75.00%), Query Frame = 0
Query:   54 GEGGVLRLRLHPRPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGES 102
            G   V R+ L PRPHV +DE V+DNEH+ +K S +CCIFHKKR FGES
Sbjct:   21 GTAPVYRMELQPRPHVTFDESVVDNEHLGRKRSNKCCIFHKKRDFGES 68          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: EOD50110.1 (putative type 1 phosphatase regulator ypi1 protein [Neofusicoccum parvum UCRNP2])

HSP 1 Score: 70.1 bits (170), Expect = 7.200e-9
Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = 0
Query:   37 SSTGSATVVEDKAAAKEGEGGVLRLRLHP--RPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGESS 103
            +S+GS    E  A+      G LRLR  P  R H++W E V+DNE M KKSSK CCI+HK+R FGESS
Sbjct:   16 ASSGSLVTTESGASPLNLPSGTLRLRAEPVQRRHIQWAEDVVDNEGMGKKSSKVCCIYHKQREFGESS 83          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: XP_002177096.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51559.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 68.2 bits (165), Expect = 2.700e-8
Identity = 35/64 (54.69%), Postives = 40/64 (62.50%), Query Frame = 0
Query:   39 TGSATVVEDKAAAKEGEGGVLRLRLHPRPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGESS 103
            TGS T+    AA    E   L L L   P V+W+  VIDNE M +KSSKRCCIFHK+R F ESS
Sbjct:   42 TGSVTMTVTDAATTRHEPEPLVLTLQAHPSVRWENDVIDNEGMGRKSSKRCCIFHKQRPFDESS 105          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: XP_020125053.1 (type 1 phosphatase regulator ypi1 [Diplodia corticola] >OJD28793.1 type 1 phosphatase regulator ypi1 [Diplodia corticola])

HSP 1 Score: 67.8 bits (164), Expect = 3.600e-8
Identity = 35/68 (51.47%), Postives = 42/68 (61.76%), Query Frame = 0
Query:   37 SSTGSATVVEDKAAAKEGEGGVLRLRLHP--RPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGESS 103
            +S GS    E   +      G LRLR  P  R H++W E V+DNE M KKSSK CCI+HK+R FGESS
Sbjct:   17 ASNGSIVTTESGQSPLSLPSGTLRLRAEPVQRRHIQWAEDVVDNEGMGKKSSKVCCIYHKQREFGESS 84          
BLAST of NO19G01070 vs. NCBI_GenBank
Match: XP_009842011.1 (hypothetical protein H257_15559 [Aphanomyces astaci] >ETV68582.1 hypothetical protein H257_15559 [Aphanomyces astaci])

HSP 1 Score: 67.4 bits (163), Expect = 4.700e-8
Identity = 38/70 (54.29%), Postives = 44/70 (62.86%), Query Frame = 0
Query:   33 QAKPSSTGSATVVEDKAAAKEGEGGVLRLRLHPRPHVKWDE-KVIDNEHMNKKSSKRCCIFHKKRAFGES 102
            QA P+   +AT    + A  E    V  LRL PRPHV++DE   IDNE   +K SKRCCIFHKKR FGES
Sbjct:   10 QAAPA---TATTTVARVAEPEVRPEVYVLRLDPRPHVRFDEATAIDNEFFGRKKSKRCCIFHKKREFGES 76          
The following BLAST results are available for this feature:
BLAST of NO19G01070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23608.12.600e-2777.16protein phosphatase inhibitor [Nannochloropsis gad... [more]
GAX16237.17.700e-1159.02hypothetical protein FisN_3Hu281 [Fistulifera sola... [more]
GAX96313.11.000e-1056.45protein phosphatase inhibitor [Pythium insidiosum][more]
OLP85840.13.800e-1052.33Cyclopropane-fatty-acyl-phospholipid synthase [Sym... [more]
OEU08804.15.000e-1077.78PPI_Ypi1-domain-containing protein [Fragilariopsis... [more]
XP_008892129.12.500e-962.50hypothetical protein PPTG_02662 [Phytophthora para... [more]
EOD50110.17.200e-952.94putative type 1 phosphatase regulator ypi1 protein... [more]
XP_002177096.12.700e-854.69predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_020125053.13.600e-851.47type 1 phosphatase regulator ypi1 [Diplodia cortic... [more]
XP_009842011.14.700e-854.29hypothetical protein H257_15559 [Aphanomyces astac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004441NSK004441Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01070.1NO19G01070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598983gene_7501Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100550g4gene6845Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01070.1NO19G01070.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01070 ID=NO19G01070|Name=NO19G01070|organism=Nannochloropsis oceanica|type=gene|length=486bp
ATGGAAGCCAAGAACAGCGGTGGCCCCACCAGCCCCAACGGCGGTGGCAG
GGGCAGTGGTAGCATCGGAGTGGTGGGAGGAAGAGGTGGGCATATGCAAG
CAAAACCAAGCTCGACGGGCTCGGCGACGGTGGTGGAAGACAAGGCAGCC
GCCAAGGAAGGGGAGGGAGGAGTGCTGCGATTGCGGCTGCACCCACGGCC
GCACGTGAAGTGGGACGAGAAAGTGATAGACAATGAGCATATGAACAAGA
AGAGCAGTAAAAGATGCTGTATATTTCATAAGAAGCGGGCGTTTGGGGAA
AGTTCGAGTGAGAGCGAGAGTGAGAGTGATGATGGGGATGAGGAGAAGGG
TGGAGAACGAGGAGAGATGGGCAAAGCTGGAGGGAGAGGAGGAAAGGGTA
GGAAGGGAAAGAAAAAGGATAAGCACATGCATGTGGCCCAACCAAAGCAT
CCGCCGATCAAACCGCATGAGACCTATCATGCCTGA
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protein sequence of NO19G01070.1

>NO19G01070.1-protein ID=NO19G01070.1-protein|Name=NO19G01070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=162bp
MEAKNSGGPTSPNGGGRGSGSIGVVGGRGGHMQAKPSSTGSATVVEDKAA
AKEGEGGVLRLRLHPRPHVKWDEKVIDNEHMNKKSSKRCCIFHKKRAFGE
SSSESESESDDGDEEKGGERGEMGKAGGRGGKGRKGKKKDKHMHVAQPKH
PPIKPHETYHA*
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Synonyms
Publications