NO19G01000, NO19G01000 (gene) Nannochloropsis oceanica

Overview
NameNO19G01000
Unique NameNO19G01000
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6588
Alignment locationchr19:337919..344506 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:337919..344506 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G01000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004432NSK004432Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01000.1NO19G01000.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598952gene_7495Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_102115g1gene6850Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01000.1NO19G01000.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01000 ID=NO19G01000|Name=NO19G01000|organism=Nannochloropsis oceanica|type=gene|length=6588bp
ATGGTTGGTGAAGGAGGAGCAGGAAGAGGGCCGAGGCAGGATGCCGCAGC
GGCACCGGCGCCGACGGGGATGGACGCCGTAGTGGTGACGATGCCAGCAC
CAATAGCAGCGACACCACCTCCAGCAGCTGCAGCTGCAGCTGCAGCTGCA
GCTTTAGCCGCAGAAGGAGACCAAAAAAGTGTTGGAGGGGCTTTCTCCTC
TTATTTTCCATCTTCCCCTCTTCCTCTGCCTCCCGCGACACCGACGGCCT
CCGTGATGGCGCCACCCGCACCCCAACCATCACCATCATCAGCATCAAAA
ATCATCGTCCGCAGAAGAGGAGACACGGAAGAACGACAAGCTAAAAATGA
CGGCGGCAACGGCGGTAGCAGCAGCAGCATCAGCTGTCCAATGACCCCCA
CGGCAGCAGCTGCAGCAGCCGCAGCCGAGGCTGTGGCTGTCAGACAAAGA
GGGGGAGAAATGTGTGGAGGAGGGGGAGGAAATGGTGAAGGAGGAGCAGG
AGGAGCAGGAGGAGCAGTAGGGAAGTTCGAAAGACGAGGGGAGAGAGAGA
GAGGTGATTATGATGCGTCCTCGGCCGAGGACCAAATAATAGTGAGCGGC
CTGGTCTCCCTCCTCGCCGCCGACACAGCCGAGAAGGAAGTCGACCGGCT
CCTCTCCGACCCCGTCACTCCCTCCCTTCCTCCCCCCGCTCCTCCGTCAT
CGCCTACCTCATTTTCAAATTTTGCTGCTACTGCTGCTGCTGGTGCTGCC
GGTGCGGCGGACCTCTCCACCCTCGCGGCTGCCGTCCTCAGCAGGGCTGC
ACCACTACCCACCCCTCCCTCCAGCCCTCGTTCTTCCTCCGCTACCTCCC
CTTCCTCCTCCTCCTCCTCTTTTTCCTACCATATTTCTTCACCAGCCCTC
AAGGTTTTACGTCGTCGTTTCCAACATCTGAAATCTATTGTCAGAACGCA
GGAGGGGCTAATCACGGAACAGGAGCAGCAGCGACAGTTGCTCCGCACGG
CCCTCGCAAAGGAAGGGAAAATTAAGCGCATGAGACGGACATTGATGGAA
GAAAATGGTGGAGCAGGAGGTTGGAGGATGCGGAGCAGGGAGAGAGGGGG
GCAGAGAGAGGAGGAGGATGAGGGGGCGGGGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGTGGCCGGCCTTGAAGGGATGGGAGGGATGTTGAGTGATGTG
AATGCATACGACGACGAGGGGAGCGAGGACGAAGTAGCTGAAATCAAAAC
CCTCCTGATTACCTATGCCCTACGGCAGCAGGAGCAGCAGCAGCAGCAGC
AGGAGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGTTGGTGCTG
CCGCTTCGGTGGTTTGGGCTTGCCACGCGGAATGAAGTCCGAGAAGCCTT
GTCGGAGGAAGGACAAGGGCTGCTGAAGAAAGAGAGACTTGACAGCGCGT
GCGCTGCGGTGACTGCCGCGTTACATGACGGGAGGCTTGTTCCCTTTGAG
AGGGATGGAAGGACGGGCGAGGTGGTGGGAGTGAATCGGAAGATGCGGGA
GCTACAGCAGCTTGGGTTGGAGTTTGGAAAAGGTGTTATTGAATTGATCG
TGAGCAAGAAGAGGGAGATGGCGAGGTATAGAGGGAGGAAGGGATGGAAG
GAGGGGTTGGTGCCGGTGCCGGTGATGTGGGTGGAAGGGAGGGGGGAGAT
GGGGGTGGTGGAGGCTCTTGGGAGGGTGTTGGGGTGGAGGGAGGAGCGGC
ATCGAAAGCACAAGTATCAACAGCAGCAGCAGCTGCAGCAGCAGGGTGGA
AATGGAGGAAGAGGCGGAGGCGGAGGTGGAGGTGGAGGTGGGGGGAATGG
AGGGTCCTCCTTTTATCGGCAGCAACAGCAGCGGCGGCGGGGAGGGGGCT
CGTCACGGGGTGGTGGTGATGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGGCACGAATCCTTCCGCTCCACCTCCGCCTC
TTGTCCCAACACTCCTTTCTCTTACTCATGCTCCACTACCTCAACCACAC
TCGGCGCCCCTCTCCCCCTCCCTCCCTCTCCGCCCCTCCTGACCCTCACC
CCTGCGATGCACGATGCCTTCCTCGCGTGGCTGAGAGAGCACACGACGTT
AAAAACACCTGTTATTACCACTGCTGGTGGTCTCATTGATGCCTTCCTCG
CACGGGTCGCTGTTGCTGCCTTGGTGGCAGCAGCAGCAGCAGCAGGAGTG
CGAGACGTCCAGCCTGATGAGGTGGACTTGCCACTCCTACAGgtatgtgg
tgatctccttctctctctccccttccctctctccttcccaccccctttcc
tttcccagctcatttttgtaccaacagctctctttttccttcctcctcgc
cctccctcgctctctccctctcccttttgtatttccctctttaaaagtcg
aggtgagcgcgttaagccccacactcctctctctctctcgttgaccgacc
cttcccgtccatccctccctcccgccctccctccctccccccttccccag
TCGCTCACCGAGCTCAAGTCGTTCGTGGAAACACATGTCTCTCCGTGCCA
ACGCGAGGCTGCCACTGCCAGTAGGACGATGCAGCAGCTGTGGGCTTGTT
TCTTGGCATATCTGGGGTATGCTGAGGGAGGGGGGGAAGGAGGGCAGGCT
CTGGAAAAAGAGCACTGCCACCAGCACCAGCTCCAGCACCAGCAGCAGCA
GCATTCATCCTCTCGGTCACGCAGCGGGAACTCCACCCCTCGAGGAGGTG
GAGAAGGAGGGAGGGAAGGAGGGAGGGAGGGAGGGCGCCAAGCGTCGATA
CTGGATGCTTCGGCAAGACAAGGCTTCCTGGAGTGGATGACGAAGAATAC
ACGAGCCAACAGTAACAGTCAAGCTGGTCTCGTCTCGGCCGTTAATTGCT
GTCTGAGATCGATCGTGGCGGGAGAGGAAGGGAGGGAGGGAGGGGTGGTG
TTGGGGTTACGGGATGTGAAGGGATGGTTGAGGAGCCACCGAGAGGCGGT
GGAGCATCAGGTGGAGAGGAGTACTAGCTGTACGCTAAAAACGGGATTCC
GTTACTTCAAACGTTATTTGGAGTCGTTGGAAGGAGGGATGGAGGGAGGG
AGAGAGGAACAATTTGTGCAGCAGCAGCAACCGCCTGGCGATGATTGGGC
CTCGTCGTCTCCTTCTATGTGTGGGTATGCCGGTCAGCAGCAGCAGCAGC
AGCAGCAGCAGGAGCAGCACCAGCACCAGCACCAGCAACAGCAGCAGCAG
CGTCATTATCCCCACGCTTTCTCCGGTCGTGTTGGTAGTGGTTCTGTGTC
CGCACCAAGGCCACTGACTACAAGTACTGTTGCTGATAAGGATGTTTGTC
GTACTGCTACAGCTGCCGCTGAAGAAAGAAGGAAGGAGACGGCGGGAAAA
AAGGAGGACGAAGAAAAGGACGGGGAGGAGGAAGCAGGCGCCGGCGGTCG
CATCGTCGCTGCCATGGATATATTCACTCCCCTTCCTCCGTCCTCCTCTT
CCCTCTCCTCCTCGTCGTCCTCTTGTTCATCTTCTTCTTTTTCTTCTTCT
TCGTCCCCTTCTTTCTCCCCTTTCGTGTCCCATCACCGCACCTCGCCTCC
TTTTTCCCTGACACCCTCCTCCTCTTTCCACCATAACCCTCACTACTCGC
AAACCATCTTCGGAAGAGGGGACGGGCGGGAGGGAGGAAAGGGGGGGATG
ATGCCTCCCACTCACCAGATGAAGATCCAAGAAAGTTTTGTTTTAGGGGG
GGGAGCAGAAGGGGAAGAAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGAGACGAGA
AGGATATTTCGTGGTGGTCGTGGCCGTCTTCCTTCCATATTAGACTCGAG
GACATTAGAGCGCTTTGTTAATTGGCTGCAAGAACACACCAAGCTGCGAC
AGGAGGCCTCTATTCAAAACGCCTTGAGATCCGTCGACAGATTCTTGCGA
ACGGCCATCGGAGGGCAAGGAAGGGAGGGAGGAAGAGTTGAACGTGGGGG
GTCGTTGAATGAAGAGGCAGCTTGGCAAGTGATGCGGAGGGAAGAGGAGG
AGGAAGGGAGGGACGGGCTGCCTACGAAAGATCCGCCAGCGTATGCCAGG
TACTTCCGGCAATACCTGATGGCCTGGAGGCAGGCAGGGCCGGGAGCAGA
TCAAATGGCATTACTCGACCTCCCTCCCACCTTCCCTTCCACCCACCTCC
CTCCTCCTTCCTTCCCGGCGTCGCATCCTCCTCCCGTGGGATGCTCTCAG
CTAGAGGAACAGCAACATCAACACCAACAGTATAAAGACCACAATCCTTT
TCTATATCATCCACAACAGTCGCAGGTGGAGAGAAAGGAAAGCATCAGCG
CGGCCTCGGGCGTTTCTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAC
CTCCTCCTCCTCCTCCTGCTCGGCTCCTCCTCCAGTCATCAGCTGCATAA
ATGGCAAGAGCAACAGCAAACGGAAGCGCGTTTCGTTGGCATTGGACGAG
TTGACACCCTTTCCATCCTCCCGCCCTGGCCCCCTCCCAACCCCTCTCTC
GCCCACTACCAAAGAGGCCTTTACCTCCTGGCTCCTCCATCAAAATCACC
ACACCCTCTCCTCCTCGCCCTCCGCCGCCTCCTCCTTCTCCTCCGCCGAG
CACCTCCTCATCGAGGCCATCAACCACCTCCTCTCCGAAGTCATGAAGAA
ACTAGGAGGGGTCGCCTCAGTTCATTCCCTTTCCCCAGAGGGTTTGACGA
TCTTTGTCAGGAAGCATTTCAAGGCCTTGGAAGGAGCGGTGGGCCACATC
GAGAGGGAGGAGGGGAGAGGAAGAAAGGAAGGAGGAAGGGAAGGAGGGGG
GTTGAAGAAGGCATGGACATTGCTGATGCGGTTTTTGGAAGAGAGAGGAC
CGGCGTGGGGCAGGgtgatgaaggtggaggaggggggggggagggagaaa
aggcgagtcgttggggcccgccgataaagGCGACCGACAGCAGTAACAGG
AAGACCACGACAAATGTGGCTGCTGCTGCTGCTGGTGGTGGTGGTGGTGA
TGGTTGTTGTGGTGGTGGCGCTGTTGCTGCTGCTGCTGCGGCTGCTGCGG
CTGCTGCGGCTGCTTCGGCTGCTGCCCACCCGATGCCCCTCCGTTCCCGC
TCTTCCTCCTCTTCATCCTCTACCTCTGCCTCCGTCTCTCCCTCCCTCCC
TCCCTCCCATCCCCCTTCCTCGATCATAAAACGACGTAACAGCATCAGCA
GTACCACCAGTACGGGGAGTAGGGAGGGAGGGAGGAAATCCCCCCTCCCC
CGAGTCCTCGCCGGCACGGTGCGGAGGAATTTGATGAAGTGGCTTCTGGG
ACAAGGGCAGGGAGGGAGAGAGGGAGGGAGGGAGGGAGGGAGGGCGTTGG
AGCAGTATTGTAATGGAGTCAACCGCCTCTTGCTTTGCTTGCTCGAGGGG
GAGGGAGGGAGGGAAGGAGGGCGGGAGCTAGACATGGAGGGCATACAAAC
GTTGATGGCACGGTGTGAGAAGAGGGGGGGCTTGGAAGCATGTGTGCTAC
CGAAGGACCTAGAGGAGGGGGAGGAAGGGAGGGAGGAAGGGGGGGAGGGA
GGGTTGCGGGTGGCGTGGAATATCCTAGCTGGGTATGTTGCCTCGATGGA
CGAGCTCATGACCCTCTCCGTCCTTCCCGCTCCCCTTCCTCCCGCCCTTC
CTCCTCCTTCCCCTTCTTTTCCCCCAACGGCCACAACGGCCACAACGGCC
CCTCCCCTCATTACTTCCACTGCCATGACTTCTTCCTCTCCCCCGCCCTC
CCCTTTTCCTCCAACACCTCGGGTGAGCACTGCTCCTCCCTCCCTCCCTC
TGTTGCCCAGTCGACCTCCTGTGGATGCAGGTACCAAGGAGGAAGAGGGG
GAGGGCCGGAGGGAGGAGAAGGGCTGAGGGAGGGGGGGGCGGCTGGCAAG
GTCTCCAGTCATCCTACTTCAGAAGAGGGAGGGAGGGAGAGAGGGGTCAT
TAGGCATGAAGCAGTCGATGAAGGAAGGTGAATGTGTGAATGTGTGTGTG
TAGTTGTGTGAAAGTTGTATGTTTATAGATGCATATGAGCGTGTATAACT
GTGCATGTGGGTGTGCCAAGAAACATCGAGAGTGAGAAAGAGAGAAGGGG
GGGAAAGATGGTACTTTCATCAAGAAATTATGTGTGGTTGTGCTGTTAAG
AGGTAAAGATGTGAAGGCGGGAGGCGAGGAAGGGAGATAGAGAAAGACGG
AGAGGGACATATATGTGTACACATATGTGCAGGTGAATGTAATGTCATCA
TCATCATAATGACGTGTATTTGTGACAGCAAGAGCCGAGGAGCGAGGGTG
GGAAGCGAGAAAGGAAAAGAGACAGACGCGCCGACCGACCAACCCTTATA
TATATATATATATATATATATATATATATATATATATA
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protein sequence of NO19G01000.1

>NO19G01000.1-protein ID=NO19G01000.1-protein|Name=NO19G01000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1918bp
MVGEGGAGRGPRQDAAAAPAPTGMDAVVVTMPAPIAATPPPAAAAAAAAA
ALAAEGDQKSVGGAFSSYFPSSPLPLPPATPTASVMAPPAPQPSPSSASK
IIVRRRGDTEERQAKNDGGNGGSSSSISCPMTPTAAAAAAAAEAVAVRQR
GGEMCGGGGGNGEGGAGGAGGAVGKFERRGERERGDYDASSAEDQIIVSG
LVSLLAADTAEKEVDRLLSDPVTPSLPPPAPPSSPTSFSNFAATAAAGAA
GAADLSTLAAAVLSRAAPLPTPPSSPRSSSATSPSSSSSSFSYHISSPAL
KVLRRRFQHLKSIVRTQEGLITEQEQQRQLLRTALAKEGKIKRMRRTLME
ENGGAGGWRMRSRERGGQREEEDEGAGEEEEEEEEEVAGLEGMGGMLSDV
NAYDDEGSEDEVAEIKTLLITYALRQQEQQQQQQEEEGGREGGREEGLVL
PLRWFGLATRNEVREALSEEGQGLLKKERLDSACAAVTAALHDGRLVPFE
RDGRTGEVVGVNRKMRELQQLGLEFGKGVIELIVSKKREMARYRGRKGWK
EGLVPVPVMWVEGRGEMGVVEALGRVLGWREERHRKHKYQQQQQLQQQGG
NGGRGGGGGGGGGGGNGGSSFYRQQQQRRRGGGSSRGGGDGGGGGGGGGG
GGGGGGGHESFRSTSASCPNTPFSYSCSTTSTTLGAPLPLPPSPPLLTLT
PAMHDAFLAWLREHTTLKTPVITTAGGLIDAFLARVAVAALVAAAAAAGV
RDVQPDEVDLPLLQSLTELKSFVETHVSPCQREAATASRTMQQLWACFLA
YLGYAEGGGEGGQALEKEHCHQHQLQHQQQQHSSSRSRSGNSTPRGGGEG
GREGGREGGRQASILDASARQGFLEWMTKNTRANSNSQAGLVSAVNCCLR
SIVAGEEGREGGVVLGLRDVKGWLRSHREAVEHQVERSTSCTLKTGFRYF
KRYLESLEGGMEGGREEQFVQQQQPPGDDWASSSPSMCGYAGQQQQQQQQ
QEQHQHQHQQQQQQRHYPHAFSGRVGSGSVSAPRPLTTSTVADKDVCRTA
TAAAEERRKETAGKKEDEEKDGEEEAGAGGRIVAAMDIFTPLPPSSSSLS
SSSSSCSSSSFSSSSSPSFSPFVSHHRTSPPFSLTPSSSFHHNPHYSQTI
FGRGDGREGGKGGMMPPTHQMKIQESFVLGGGAEGEETAAAAAAAAAAAA
AAAAAAAAAAGETRRIFRGGRGRLPSILDSRTLERFVNWLQEHTKLRQEA
SIQNALRSVDRFLRTAIGGQGREGGRVERGGSLNEEAAWQVMRREEEEEG
RDGLPTKDPPAYARYFRQYLMAWRQAGPGADQMALLDLPPTFPSTHLPPP
SFPASHPPPVGCSQLEEQQHQHQQYKDHNPFLYHPQQSQVERKESISAAS
GVSPSSSSSSSSSSSSSSSSSSSSSSSSSSTSSSSSCSAPPPVISCINGK
SNSKRKRVSLALDELTPFPSSRPGPLPTPLSPTTKEAFTSWLLHQNHHTL
SSSPSAASSFSSAEHLLIEAINHLLSEVMKKLGGVASVHSLSPEGLTIFV
RKHFKALEGAVGHIEREEGRGRKEGGREGGGLKKAWTLLMRFLEERGPAW
GRATDSSNRKTTTNVAAAAAGGGGGDGCCGGGAVAAAAAAAAAAAAASAA
AHPMPLRSRSSSSSSSTSASVSPSLPPSHPPSSIIKRRNSISSTTSTGSR
EGGRKSPLPRVLAGTVRRNLMKWLLGQGQGGREGGREGGRALEQYCNGVN
RLLLCLLEGEGGREGGRELDMEGIQTLMARCEKRGGLEACVLPKDLEEGE
EGREEGGEGGLRVAWNILAGYVASMDELMTLSVLPAPLPPALPPPSPSFP
PTATTATTAPPLITSTAMTSSSPPPSPFPPTPRVSTAPPSLPLLPSRPPV
DAGTKEEEGEGRREEKG*
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Synonyms
Publications