NO19G00940, NO19G00940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00940 vs. NCBI_GenBank
Match: EWM23588.1 (uncharacterized protein Naga_100139g5 [Nannochloropsis gaditana]) HSP 1 Score: 335.1 bits (858), Expect = 3.800e-88 Identity = 252/405 (62.22%), Postives = 286/405 (70.62%), Query Frame = 0 Query: 1 MGSVVGKSSLQNAPAFTSPVVYNLISTIRNVVNSAKEAQYIAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKL--------------------------------RRAG-KSMPPFAMNMKEVVPIQRMLDQIELQHLGMVAPVHPHLQPPSGNASEIHYLCVVEEDDFHVGIFVLPPNARIPLHDHPGMCVLSRLLAGSLNVKDFDWCDPXXXXXXXXXXXXXXXXXXXXXXXXXXNFKRTRGFAKLTSSTWLEKPTTLALFHTHNNIHEFEAGGEGCAILDVLVPPYDPLRGRPCNYYEVTSSSLPSSSLAGREEDRKGRRRGRDGVVRQGSEGGGKGERGIELEVGKVYKLVPTEAPEEFDVISGTYVGP 373 MGSVVGK S+ N PAFTSP++Y+LIST R+VV +AKEAQ IA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RR G + P FAM M +V PIQ++LDQIEL HLGM+APVHPHLQPP+ SEIHYLC++EE+DFHVG+FVLPP ARIPLHDHPGMCVLSRLL+GSLNVKDFDWC+P XXXXXXXXXXXXXX R RG+A+LTSS WLE+PTTL+LF T NN+HEF AG EGCAILDVL+PPYDP+RGRPCNYY+V P E R+ RR G+ G EG L+VGKVY+L+PTEAPE+FDV+S TY+GP Sbjct: 1 MGSVVGK-SVPNTPAFTSPLIYSLISTTRHVVCTAKEAQLIASIGVVSPVDNGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRRLGRRRAPAFAMGMTQVAPIQKILDQIELHHLGMIAPVHPHLQPPTSRPSEIHYLCLLEEEDFHVGVFVLPPEARIPLHDHPGMCVLSRLLSGSLNVKDFDWCEPPSXXXXXXXXXXXXXXL------------RARGYARLTSSLWLEEPTTLSLFDTRNNLHEFHAGKEGCAILDVLIPPYDPMRGRPCNYYQVLDEGAP-------ERGRRRRREGKGATKAGGREG---------LKVGKVYRLLPTEAPEDFDVVSATYLGP 376
BLAST of NO19G00940 vs. NCBI_GenBank
Match: XP_008616226.1 (hypothetical protein SDRG_11950 [Saprolegnia diclina VS20] >EQC30373.1 hypothetical protein SDRG_11950 [Saprolegnia diclina VS20]) HSP 1 Score: 121.3 bits (303), Expect = 8.600e-24 Identity = 74/194 (38.14%), Postives = 101/194 (52.06%), Query Frame = 0 Query: 116 AMNMKEVVPIQRMLDQIELQHLGMVAPVHPHLQPPSGNASEIHYLCVVEEDDFHVGIFVLPPNARIPLHDHPGMCVLSRLLAGSLNVKDFDWCDPXXXXXXXXXXXXXXXXXXXXXXXXXXNFKRTRGFAKLTSSTWLEKPTTLALFHTHNNIHEFEAGGE-GCAILDVLVPPYDPLRGRPCNYYEVTSSSLPS 309 A++++E+ PI+ + D I H+G+ P + + I Y+ + E+ D +GIFVLPP A IPLH+HP M V+SRLL GSL+V +D XXXXXX R ++ P T L N+HEF +G + GCAILDVL PPYDP RGR C YY V ++ P+ Sbjct: 22 ALSLQEIEPIKALCDAILPIHVGLDVPTPATAETLYRGSKAIRYIHIYEDRDVSIGIFVLPPGATIPLHNHPDMSVVSRLLYGSLHVTAYDLVPAEANDAFWAAHDPGDDPPSIWXXXXXXXXXXXR------QDRTVQAPYTTELLPHKGNLHEFTSGSDIGCAILDVLTPPYDPSRGRDCTYYRVAAALEPT 209
BLAST of NO19G00940 vs. NCBI_GenBank
Match: OQR92765.1 (hypothetical protein ACHHYP_03226 [Achlya hypogyna]) HSP 1 Score: 119.4 bits (298), Expect = 3.300e-23 Identity = 67/194 (34.54%), Postives = 95/194 (48.97%), Query Frame = 0 Query: 116 AMNMKEVVPIQRMLDQIELQHLGMVAPVHPHLQPPSGNASEIHYLCVVEEDDFHVGIFVLPPNARIPLHDHPGMCVLSRLLAGSLNVKDFDWCDPXXXXXXXXXXXXXXXXXXXXXXXXXXNFKRTRGFAKLTSSTWLEKPTTLALFHTHNNIHEFEAGGE-GCAILDVLVPPYDPLRGRPCNYYEVTSSSLPS 309 A++ E+ PI+ + D I H+G+ P + + + Y+ + E+ D +GIFVLPP A IPLH+HP M V+SRLL GSL+V +D K+ A+ S + P T L N+HEF +G + GCAILDVL PPYDP GR C YY + ++ P+ Sbjct: 20 ALSASEMEPIKALCDNILPIHVGLEVPTPATAEALYRGSKAVRYIHIYEDCDISIGIFVLPPGATIPLHNHPEMSVVSRLLYGSLHVSSYD------LVPAAANDAFWAAHDPGEDSPSIWRRKKKLHLAQQRVSHVVHAPYTTELLPHRCNLHEFTSGADIGCAILDVLTPPYDPSHGRDCTYYRIAAALEPT 207
BLAST of NO19G00940 vs. NCBI_GenBank
Match: OQS04464.1 (hypothetical protein THRCLA_03304 [Thraustotheca clavata]) HSP 1 Score: 115.2 bits (287), Expect = 6.200e-22 Identity = 65/198 (32.83%), Postives = 98/198 (49.49%), Query Frame = 0 Query: 108 AGKSMPPFAMNMKEVVPIQRMLDQIELQHLGMVAPVHPHLQPPSGNASEIHYLCVVEEDDFHVGIFVLPPNARIPLHDHPGMCVLSRLLAGSLNVKDFDWCDPXXXXXXXXXXXXXXXXXXXXXXXXXXNFKRTRGFAKLTSSTWLEKPTTLALFHTHNNIHEFEAGGE-GCAILDVLVPPYDPLRGRPCNYYEVTSS 305 A +S+ A+ ++E+ PI+ + + I H+G+ P + + I Y+ + E+ +GIFVLPP A IPLH+HP M V+SR+L GSL+V+ FD + + R A +T+ P T L N+HEF + + GCAILDVL PPY+P GR C YY + ++ Sbjct: 14 AVRSVRGRALTIEEIEPIKELCESILPVHVGLEVPTAATAKDAFKGSKAIRYIHIYEDAQVSIGIFVLPPGASIPLHNHPEMSVISRVLYGSLHVRAFDLVPTEANDAFWAQHDQEQDPPSIWKRKRSLHLAQERFNAVVTA------PHTTELLPHRGNLHEFTSDPDIGCAILDVLTPPYNPSHGRDCTYYRIAAA 205
BLAST of NO19G00940 vs. NCBI_GenBank
Match: XP_002909426.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY58240.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 114.8 bits (286), Expect = 8.000e-22 Identity = 66/199 (33.17%), Postives = 96/199 (48.24%), Query Frame = 0 Query: 114 PFAMNMKEVVPIQRMLDQIELQHLGMVAPVHPHLQPPSGNAS------EIHYLCVVEEDDFHVGIFVLPPNARIPLHDHPGMCVLSRLLAGSLNVKDFDWCDPXXXXXXXXXXXXXXXXXXXXXXXXXXNFKRTRGFAKLTSSTWLEKPTTLALFHTHNNIHEFEAGGE-GCAILDVLVPPYDPLRGRPCNYYEVTSSS 306 P A+ ++E+ P++ + DQ+ P + L+ PS S +HY V E++ F +GIF+LPP IPLHDHPGM V+SR+L GSL++K +D + K+ + A+L + P T L H+N+HE + GCA LD++ PPY GR C YY V SS Sbjct: 43 PHALTVEEIAPVKAICDQL--------FPANFQLKVPSAEDSGPERPKRVHYQHVYEDETFSIGIFILPPGVSIPLHDHPGMSVISRVLYGSLHIKSYD----------------------LIKDGAAASGKKHK--ARLRVDKTITAPYTTELLPDHSNLHELVGDDDIGCAFLDIITPPYHSNEGRDCTYYRVIDSS 209
BLAST of NO19G00940 vs. NCBI_GenBank
Match: GAX96866.1 (Hypothetical protein PINS_004740 [Pythium insidiosum]) HSP 1 Score: 114.0 bits (284), Expect = 1.400e-21 Identity = 77/272 (28.31%), Postives = 116/272 (42.65%), Query Frame = 0 Query: 104 KLRRAGKSMPPFAMNMKEVVPIQRMLDQIELQHLGMVAPVHPHLQPP--SGNASEIHYLCVVEEDDFHVGIFVLPPNARIPLHDHPGMCVLSRLLAGSLNVKDFDWCDPXXXXXXXXXXXXXXXXXXXXXXXXXXNFKRTRGFAKLTSSTWLEKPTTLALFHTHNNIHEFEAGGE-GCAILDVLVPPYDPLRGRPCNYYEVTSSSLPSSSLAGREEDRKGRRRGRDGVVRQGSEGGGKGERGIELEVGKVYKLVPTEAPEEFDVISGTYVGP 373 KL R G A+ ++E+ PI+ + D++ H + P + + P +G + + Y + E + F +GIF+LPP + IPLHDHP M V+SR+L G L+VK FD D +R A+L + P T L N+HEF A E GCAI D+L PPY+ GR C Y ++ + + G++ +ELE P+ F+V+S Y+GP Sbjct: 40 KLAREGAD-AALALTVEEIAPIKALCDELTPAHFRLTMPETANSELPRHAGRRNRVRYQHISENELFSMGIFILPPGSSIPLHDHPEMSVISRVLYGGLHVKSFDIVDSKEARDVRTQLERADPSA----------VSESRHIARLFQDDIITAPHTTDLLPDRGNLHEFVAXEELGCAIFDILTPPYESDDGRDCTYXRXVGEAITADN----------------------------GQQYVELEEFN---------PQHFEVVSEPYLGP 263
BLAST of NO19G00940 vs. NCBI_GenBank
Match: XP_008862665.1 (hypothetical protein H310_01358 [Aphanomyces invadans] >ETW08860.1 hypothetical protein H310_01358 [Aphanomyces invadans]) HSP 1 Score: 112.8 bits (281), Expect = 3.100e-21 Identity = 68/185 (36.76%), Postives = 88/185 (47.57%), Query Frame = 0 Query: 116 AMNMKEVVPIQRMLDQIELQHLGMVAPVHPHLQPPSGNASEIHYLCVVEEDDFHVGIFVLPPNARIPLHDHPGMCVLSRLLAGSLNVKDFDWCDPXXXXXXXXXXXXXXXXXXXXXXXXXXNFKRTRGFAKLTSSTWLEKPTTLALFHTHNNIHEFEAGGE-GCAILDVLVPPYDPLRGRPCNYY 300 A NM EVV I+ + D++ LG+ P P I Y+ V E+ D +GIFV+PP IPLH+HP M V+SR+L GS+ V FD P R A ++ + PTT+ L NIHEF A G+ GCAI D+L P Y+PL GR C YY Sbjct: 22 AFNMAEVVEIKELCDRLLPSDLGLEVP-RPVSVDQLPRFRPIRYIEVYEDTDISMGIFVMPPGTSIPLHNHPQMTVISRVLYGSMQVNAFDLVAPEIDEEFWRRKEERIRNAELKHNRFPRFRPRHLKVAVRRNTELVHGPTTIELLPDRCNIHEFVAVGDVGCAIFDILTPGYNPLAGRDCTYY 205
BLAST of NO19G00940 vs. NCBI_GenBank
Match: POM72184.1 (hypothetical protein PHPALM_11144 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 112.8 bits (281), Expect = 3.100e-21 Identity = 65/195 (33.33%), Postives = 91/195 (46.67%), Query Frame = 0 Query: 114 PFAMNMKEVVPIQRMLDQIELQHLGMVAPVHPHLQPPSGNA---SEIHYLCVVEEDDFHVGIFVLPPNARIPLHDHPGMCVLSRLLAGSLNVKDFDWCDPXXXXXXXXXXXXXXXXXXXXXXXXXXNFKRTRGFAKLTSSTWLEKPTTLALFHTHNNIHEFEAGGE-GCAILDVLVPPYDPLRGRPCNYYEVTSS 305 P A+ E+ PI+ + DQ+ P + LQ P +HY V E++ F +GIF+LPP IPLHDHPGM V+SRLL GSL++K +D + A+L + + P T L + N+HE G + GCA +D++ PPYD GR C YY V +S Sbjct: 43 PHALTPDEMAPIKAICDQL--------FPANFQLQVPESGVERPKRVHYKHVYEDETFSIGIFILPPGVSIPLHDHPGMSVISRLLYGSLHIKSYDLVKDGAVPVG------------------------KKHKARLQADEIVVAPHTAELLPDYGNLHELVGGEDIGCAFVDIITPPYDANDGRDCTYYRVIAS 205
BLAST of NO19G00940 vs. NCBI_GenBank
Match: ETM33954.1 (hypothetical protein L914_18856 [Phytophthora parasitica]) HSP 1 Score: 112.5 bits (280), Expect = 4.000e-21 Identity = 63/192 (32.81%), Postives = 91/192 (47.40%), Query Frame = 0 Query: 114 PFAMNMKEVVPIQRMLDQIELQHLGMVAPVHPHLQPPSGNASEIHYLCVVEEDDFHVGIFVLPPNARIPLHDHPGMCVLSRLLAGSLNVKDFDWCDPXXXXXXXXXXXXXXXXXXXXXXXXXXNFKRTRGFAKLTSSTWLEKPTTLALFHTHNNIHEFEAGGE-GCAILDVLVPPYDPLRGRPCNYYEVTSS 305 P A+ +E+ P++ + D++ + + P P +HY V E++ F +GIF+LPP A IPLHDHPGM V+SR+L GSL++K +D K+ R A+L + P T L + N+HE E GCA LD++ PPYD GR C Y+ V S Sbjct: 43 PHALTAEEIAPVKAICDELFPANFQLTVPGTESSGP--DRPKRVHYQHVYEDETFSIGIFILPPGASIPLHDHPGMSVISRVLYGSLHIKSYD----------------------LIKDSAAPRDKKLR--ARLRVDEVITAPYTTELLPDYGNLHEIVGDDEIGCAFLDIITPPYDSNVGRDCTYFRVVDS 208
BLAST of NO19G00940 vs. NCBI_GenBank
Match: ETI33751.1 (hypothetical protein F443_19618 [Phytophthora parasitica P1569] >ETL80763.1 hypothetical protein L917_18765 [Phytophthora parasitica]) HSP 1 Score: 112.1 bits (279), Expect = 5.200e-21 Identity = 63/192 (32.81%), Postives = 91/192 (47.40%), Query Frame = 0 Query: 114 PFAMNMKEVVPIQRMLDQIELQHLGMVAPVHPHLQPPSGNASEIHYLCVVEEDDFHVGIFVLPPNARIPLHDHPGMCVLSRLLAGSLNVKDFDWCDPXXXXXXXXXXXXXXXXXXXXXXXXXXNFKRTRGFAKLTSSTWLEKPTTLALFHTHNNIHEFEAGGE-GCAILDVLVPPYDPLRGRPCNYYEVTSS 305 P A+ +E+ P++ + D++ + + P P +HY V E++ F +GIF+LPP A IPLHDHPGM V+SR+L GSL++K +D K+ R A+L + P T L + N+HE E GCA LD++ PPYD GR C Y+ V S Sbjct: 43 PHALTAEEIAPVKAICDELFPANFQLTVPGTEGSGP--DRPKRVHYQHVYEDETFSIGIFILPPGASIPLHDHPGMSVISRVLYGSLHIKSYD----------------------LIKDSAAPRDKKLR--ARLRVDEVITAPYTTELLPDYGNLHEIVGDDEIGCAFLDIITPPYDSNVGRDCTYFRVVDS 208 The following BLAST results are available for this feature:
BLAST of NO19G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00940 ID=NO19G00940|Name=NO19G00940|organism=Nannochloropsis oceanica|type=gene|length=2109bpback to top protein sequence of NO19G00940.1 >NO19G00940.1-protein ID=NO19G00940.1-protein|Name=NO19G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=512bpback to top Synonyms
Publications
|