NO19G00870, NO19G00870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00870 vs. NCBI_GenBank
Match: EWM23598.1 (peroxisome biogenesis factor 10 isoform 2 [Nannochloropsis gaditana]) HSP 1 Score: 268.1 bits (684), Expect = 5.000e-68 Identity = 228/383 (59.53%), Postives = 256/383 (66.84%), Query Frame = 0 Query: 6 TPSPYIPNPATTAEACPPQRRGGNASTSILLNNLGLPLAAGPDIMLSWEKDAFYAKQIHTQLKELADAVLGAGRAELLSPEVESIGDLLYYTLTVWLGAGGETLGQEYCHLMLVEGQQARGGRVRGEGRRGGGEGILFLPLSGIRRGIVVLGTVLGNYVWERVLHREGWQGDYTQLIRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLPSSREALLRALHKLHLMSFFFTNQYYTLAMRLAGARTMFIREEGREGRREGGGTGPRRASYVVIGVFILMEMILKATSSIAQRLR 389 +P+P TA+A N ++ L LPLAAGPDIMLSWEKDAFYAKQIHTQLKELA+ VLGAG AEL+ PEV+S+GDLLYYTLT G G ++LGQEYC LMLVE +V G+GR+GG E LFLPLS +R + VLGTVL NYVWERV+ REGWQGDY QL+RQR XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SLLPS R+AL R LH+LHLM FF TN+Y+TLAMR+AGART+F RE G EG EG G+GPRRASYV IGV ILMEM L+A+SS+ LR Sbjct: 8 SPAPSTQENKPTADASTHSSATSNLAS--FRRKLNLPLAAGPDIMLSWEKDAFYAKQIHTQLKELAEVVLGAGIAELVDPEVQSVGDLLYYTLTYCTG-GRQSLGQEYCRLMLVE-------QVNGQGRKGGRE--LFLPLSAVRSVVFVLGTVLTNYVWERVIRREGWQGDYAQLVRQR------------------------------------------------XXXXXXXXXXXXXXXXXXXXXSSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPYLFLASLLPSPRDALFRTLHRLHLMVFFLTNRYFTLAMRVAGARTIFTREMGGEG-PEGEGSGPRRASYVAIGVLILMEMGLRASSSVMSALR 329
BLAST of NO19G00870 vs. NCBI_GenBank
Match: XP_007781107.1 (hypothetical protein W97_05029 [Coniosporium apollinis CBS 100218] >EON65790.1 hypothetical protein W97_05029 [Coniosporium apollinis CBS 100218]) HSP 1 Score: 73.9 bits (180), Expect = 1.400e-9 Identity = 47/128 (36.72%), Postives = 66/128 (51.56%), Query Frame = 0 Query: 42 PLAAGPDIMLSWEKDAFYAKQIHTQLKELADAVLGAGRAELLSPEVESIGDLLYYTLTVWLGAGGETLGQEYCHLMLVEGQQARGGRVRGEGRRGGGEGILFLPLSGIRRGIVVLGTVLGNYVWERVL 170 P A PDI+ + +KDA++A + T L L + LGA A + + + +LLY LT G G TLG+EYC ++L+EG+ GR+ G GRR G +LG+VL Y RVL Sbjct: 7 PFATSPDIIRTHQKDAYFAGTLSTSLSSLLRSALGARFAHAHATDARTAAELLYLALTT--GVGNRTLGEEYCDVVLIEGET---GRLAGVGRRAG----------------YILGSVLVPYGLGRVL 113
BLAST of NO19G00870 vs. NCBI_GenBank
Match: KFH48021.1 (Peroxisome biogenesis factor-like protein [Acremonium chrysogenum ATCC 11550]) HSP 1 Score: 69.7 bits (169), Expect = 2.600e-8 Identity = 43/105 (40.95%), Postives = 58/105 (55.24%), Query Frame = 0 Query: 42 PLAAGPDIMLSWEKDAFYAKQIHTQLKELADAVLGAGRAELLSPEVESIGDLLYYTLTVWLGAGGETLGQEYCHLMLVEGQQARGGRVRGEGRRGGG-EGILFLP 146 P AA PDI+ S +KDA+Y + L +L +LGA A L+PE+ + LLY+ LT G TLG+EYC L+ V+ A GR+ RR G G + LP Sbjct: 13 PFAAAPDIIRSHQKDAYYTGHLTNTLTDLHRRILGARSAHALAPELRTAASLLYFALTTL--PGNRTLGEEYCDLVQVD---AATGRLPSVRRRAGYIAGSILLP 112
BLAST of NO19G00870 vs. NCBI_GenBank
Match: KXX82057.1 (Peroxisome biogenesis factor 10 [Madurella mycetomatis]) HSP 1 Score: 68.9 bits (167), Expect = 4.500e-8 Identity = 47/130 (36.15%), Postives = 67/130 (51.54%), Query Frame = 0 Query: 42 PLAAGPDIMLSWEKDAFYAKQIHTQLKELADAVLGAGRAELLSPEVESIGDLLYYTLTVWLGAGGETLGQEYCHLMLVEGQQARGGRVRGEGRRGGGEGILFLPLSGIRRGIVVLGTVLGNYVWERVLHR 172 P AA PDI+ + +KDA++ + QL +L + GA A + E + D LY LT L G TLG+EYC L+ VE R+ EG+L LP S RR +L +V+ Y++ R+L R Sbjct: 22 PFAAAPDIIRAHQKDAYFQGVLTNQLSDLHRRLRGARSAHAWATETRTFADALYLCLTTLL--GNRTLGEEYCDLIQVEAPSHAPKTNLAIERKQDEEGVLVLP-SLQRRAGYILTSVILPYIFSRMLPR 148
BLAST of NO19G00870 vs. NCBI_GenBank
Match: XP_018030763.1 (hypothetical protein CC84DRAFT_1209367 [Paraphaeosphaeria sporulosa] >OAG00398.1 hypothetical protein CC84DRAFT_1209367 [Paraphaeosphaeria sporulosa]) HSP 1 Score: 68.2 bits (165), Expect = 7.600e-8 Identity = 45/129 (34.88%), Postives = 62/129 (48.06%), Query Frame = 0 Query: 42 PLAAGPDIMLSWEKDAFYAKQIHTQLKELADAVLGAGRAELLSPEVESIGDLLYYTLTVWLGAGGETLGQEYCHLMLVEGQQARGGRVRGEGRRGGGEGILFLPLSGI-RRGIVVLGTVLGNYVWERVL 170 P A PD++ S +KDA+++ + QL L V GA A + E G+LLY LT + G TLG+EYC ++ VEG+ R L G+ RR +L VLG YV R+L Sbjct: 10 PFATSPDVIRSHQKDAYFSAVLLEQLTTLLRKVKGARYAHTYTSETRVFGELLYLGLTTLI--GNRTLGEEYCDIIQVEGESGR--------------------LPGLARRAAYILSCVLGPYVLGRIL 116
BLAST of NO19G00870 vs. NCBI_GenBank
Match: OPB42943.1 (hypothetical protein A0O28_0085790 [Trichoderma guizhouense]) HSP 1 Score: 68.2 bits (165), Expect = 7.600e-8 Identity = 44/128 (34.38%), Postives = 62/128 (48.44%), Query Frame = 0 Query: 42 PLAAGPDIMLSWEKDAFYAKQIHTQLKELADAVLGAGRAELLSPEVESIGDLLYYTLTVWLGAGGETLGQEYCHLMLVEGQQARGGRVRGEGRRGGGEGILFLPLSGIRRGIVVLGTVLGNYVWERVL 170 P AA PDI+ S +KDA++ Q+ +L + GA A L+PE+ + LLY+ LT G TLG+EYC L+ V+ G L LP R +V GT+L Y+ R+L Sbjct: 25 PFAAAPDIVRSHQKDAYFTGQLSNSFTDLYRRLFGARSAHSLAPELRTAASLLYFGLTTL--PGNRTLGEEYCDLVQVDASSTSG---------------LSLPALPSRAAYIV-GTILLPYLASRIL 134
BLAST of NO19G00870 vs. NCBI_GenBank
Match: CBN76471.1 (peroxisome biogenesis factor 10 [Ectocarpus siliculosus]) HSP 1 Score: 67.8 bits (164), Expect = 1.000e-7 Identity = 52/137 (37.96%), Postives = 70/137 (51.09%), Query Frame = 0 Query: 41 LPLAAGPDIMLSWEKDAFYAKQIHTQ-LKELADAVLGAGRAELLSPEVESIGDLLYYTLTVWLGAGGETLGQEYCHLMLVEGQQARGGRVRGEGRRGGGEGILFLPLSGIRRGIVVLGTVLGNYVWERVLHREGWQG 177 L AA PD++LS E+D +YA + + ELA+ +LGA R +L+PE+ ++ LY+ LT AG +TLGQEYC + LV GR GG E PL V Y+ ER+ REGW G Sbjct: 9 LRYAAQPDVVLSQERDLYYANTLLGEGTSELAETLLGARRVMILAPELRALASCLYFGLTNL--AGKQTLGQEYCGIDLVL-----------SGRGGGRES---SPLPRRPLQAYTFLRVAVPYLQERM--REGWHG 127
BLAST of NO19G00870 vs. NCBI_GenBank
Match: KFH64176.1 (hypothetical protein MVEG_10001 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 67.8 bits (164), Expect = 1.000e-7 Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 0 Query: 38 NLGLPLAAGPDIMLSWEKDAFYAKQIHTQLKELADAVLGAGRAELLSPEVESIGDLLYYTLTVWLGAGGETLGQEYCHLMLV 120 NL LP A+ PDI+ + +KD++Y + ++ Q+K+ + G+ + EVE DL YY+LT LG +TLG+EYC +M + Sbjct: 45 NLALPSASQPDIIRANQKDSYYQQILNDQVKDAVREIFGSRTQHMYQTEVEVFSDLCYYSLTTLLGM--QTLGEEYCDIMQI 124
BLAST of NO19G00870 vs. NCBI_GenBank
Match: ORY12099.1 (Pex12 amino terminal region-domain-containing protein [Clohesyomyces aquaticus]) HSP 1 Score: 67.8 bits (164), Expect = 1.000e-7 Identity = 45/128 (35.16%), Postives = 63/128 (49.22%), Query Frame = 0 Query: 42 PLAAGPDIMLSWEKDAFYAKQIHTQLKELADAVLGAGRAELLSPEVESIGDLLYYTLTVWLGAGGETLGQEYCHLMLVEGQQARGGRVRGEGRRGGGEGILFLPLSGIRRGIVVLGTVLGNYVWERVL 170 P A PDI+ S +KDA+++ Q+ QL L V GA A + E ++LY LT + G TLG+EYC ++ VEG+ GR+ GRR G +L +LG Y+ RVL Sbjct: 37 PFATSPDIIRSHQKDAYFSGQLLEQLSSLLRKVYGARFAHTYTSETRVFSEILYLGLTTLI--GNRTLGEEYCDIVQVEGE---NGRLPALGRRAG----------------YILSCILGPYLLGRVL 143
BLAST of NO19G00870 vs. NCBI_GenBank
Match: XP_013949916.1 (hypothetical protein TRIVIDRAFT_175416 [Trichoderma virens Gv29-8] >EHK15723.1 hypothetical protein TRIVIDRAFT_175416 [Trichoderma virens Gv29-8]) HSP 1 Score: 66.6 bits (161), Expect = 2.200e-7 Identity = 44/128 (34.38%), Postives = 62/128 (48.44%), Query Frame = 0 Query: 42 PLAAGPDIMLSWEKDAFYAKQIHTQLKELADAVLGAGRAELLSPEVESIGDLLYYTLTVWLGAGGETLGQEYCHLMLVEGQQARGGRVRGEGRRGGGEGILFLPLSGIRRGIVVLGTVLGNYVWERVL 170 P AA PDI+ S +KDA++ Q+ EL + GA A L+PE+ + LLY+ LT G TLG+EYC L+ V+ G + LP R ++GT+L Y+ RVL Sbjct: 23 PFAAAPDIVRSHQKDAYFTGQLANSFSELHRRLFGARSAHSLAPELRTAASLLYFCLTTL--PGNRTLGEEYCDLVQVDA--------------SAGLSLPALP----SRAAYIVGTILLPYLASRVL 130 The following BLAST results are available for this feature:
BLAST of NO19G00870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00870 ID=NO19G00870|Name=NO19G00870|organism=Nannochloropsis oceanica|type=gene|length=2492bpback to top protein sequence of NO19G00870.1 >NO19G00870.1-protein ID=NO19G00870.1-protein|Name=NO19G00870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=452bpback to top Synonyms
Publications
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