NO19G00810, NO19G00810 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO19G00810 vs. NCBI_GenBank
Match: OLP88945.1 (hypothetical protein AK812_SmicGene29648 [Symbiodinium microadriaticum]) HSP 1 Score: 118.2 bits (295), Expect = 9.500e-23 Identity = 71/187 (37.97%), Postives = 103/187 (55.08%), Query Frame = 0
Query: 47 QHAAPSSLPAFSSSSRL----AHRLTIILTTSPVRSNPDTLLLRRVVHSFSLVPGLSQCPKIVVCDGFRLASQQSGSRYKKGKILQEEVSNYHAFIENVKQLAEDG----EGGFKDMRVEKLEERMGFAGAVHRACCAWVETPFVLVVQHDRLFMTSVDLAAALDVMEARPTQVRYIGLRTAKTKHY 226
+H + +SS RL A L++I+TTSPV SNP T +L RV+ S LVPGL PKI+VCDG + + +K GK+ EE Y FIE +++ + + + F +V + + GF AV +A A + T +VLVVQHD+ F+ DL A L+ M P V+Y+GL + T +Y
Sbjct: 676 EHGMQMQMRMRTSSLRLNATKATNLSVIVTTSPVPSNPSTEMLDRVLASMQLVPGLGSAPKIIVCDGCKCVPPGHKTNHKAGKVTIEEAQRYEQFIERLREKSAESCKCEDAAFFGTQVLSISDHHGFGFAV-KAALAHITTDYVLVVQHDQEFIAGFDLEALLETMSLHPGVVKYVGLPSVSTLNY 861
BLAST of NO19G00810 vs. NCBI_GenBank
Match: XP_005839582.1 (hypothetical protein GUITHDRAFT_157081 [Guillardia theta CCMP2712] >EKX52602.1 hypothetical protein GUITHDRAFT_157081 [Guillardia theta CCMP2712]) HSP 1 Score: 113.6 bits (283), Expect = 2.300e-21 Identity = 66/186 (35.48%), Postives = 104/186 (55.91%), Query Frame = 0
Query: 50 APSSLPAFSSSS--RLAHRLTIILTTSPVRSNPDTLLLRRVVHSFSLVPGLSQCPKIVVCDGFRLASQQSGSRYKKGKILQEEVSNYHAFIENVKQLAEDGEGGFKDMRVEKLEERMGFAGAVHRACCAWVETPFVLVVQHDRLFMTSVDLAAALDVMEARPTQVRYIGLRTAKTKHYVEEKEEML 234
+P+ P+ S L +LTI++TTSP +P+T L+ V+ SF LV GLS C K++VCDG+R+ ++ G++ + + NY + N+K+++E EG ++ + +L E GF AV ++ V T +V VVQHDR FM VD L ME +V Y+ L T+ T++Y + L
Sbjct: 3 SPTGSPSRDSQDGVDLREKLTIVITTSPASDHPETNLIDLVLKSFELVEGLSDCKKVIVCDGYRI---WKDCNFRNGRVDEIRLRNYEEYKSNIKKMSERSEGLWQHSTIMELTEHHGFGFAV-KSALDLVHTDYVCVVQHDRTFMRPVDFVEILQGMEKEGDRVGYVLLPTSSTRNYAHAQRTRL 184
BLAST of NO19G00810 vs. NCBI_GenBank
Match: XP_005778381.1 (hypothetical protein EMIHUDRAFT_237371 [Emiliania huxleyi CCMP1516] >EOD25952.1 hypothetical protein EMIHUDRAFT_237371 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 109.0 bits (271), Expect = 5.800e-20 Identity = 66/167 (39.52%), Postives = 95/167 (56.89%), Query Frame = 0
Query: 58 SSSSRLAHRLTIILTTSPVRSNPDTLLLRRVVHSFSLVPGLSQCPKIVVCDGFRLASQQSGSRYKKGKILQEEVSNYHAFIENVKQLAEDGEGGFKDMRVEKLEERMGFAGAVHRACCAWVETPFVLVVQHDRLFMTSVDLAAALDVMEARPTQVRYIGLRTAKTKH 225
SS S + LT+++T+SPV+SNP T +L + S GL +C K+++CDGF++ S+ S+ K+G I EEV Y AF++ V +L + F R+ +L R G A A+ A A V TPFV+VV HD + V L A M A PT VRY+ L + T +
Sbjct: 73 SSPSGVEQLLTVVVTSSPVQSNPSTRMLLECLASLDRNAGLGRCRKLIMCDGFKVRSR---SQRKQGVITDEEVCRYRAFVQEVARLCR-ADAAFARTRLVRLARRQGSAFAIREAVEAHVRTPFVIVVPHDCIVARPVKLEAVAAAMHASPT-VRYVKLASRTTTY 234
BLAST of NO19G00810 vs. NCBI_GenBank
Match: OLP91846.1 (hypothetical protein AK812_SmicGene26405 [Symbiodinium microadriaticum]) HSP 1 Score: 106.7 bits (265), Expect = 2.900e-19 Identity = 62/160 (38.75%), Postives = 94/160 (58.75%), Query Frame = 0
Query: 66 RLTIILTTSPVRSNPDTLLLRRVVHSFSLVPGLSQCPKIVVCDGFRLASQQSGSRYKKGKILQEEVSNYHAFIENVKQLAEDGEGGFKDMRVEKLEERMGFAGAVHRACCAWVETPFVLVVQHDRLFMTSVDLAAALDVMEARPTQVRYIGLRTAKTKHY 226
RL++++TTSP+ S+P T+LL V+ SF+ V GL+ CP I+VCDGF++ + + +K GK+ +E+ +NY + +K+L ++G ++ LE G A AV +A A VETP V + QHD F DL LDV+ V+Y+GL HY
Sbjct: 78 RLSVVITTSPIPSHPSTMLLEAVIASFTRVQGLADCPLIIVCDGFKVVKK---TTWKAGKVTEEKAANYAEYKAALKRLQDEGRLP-SGTKLVILEGHNGQAFAV-KAALAEVETPLVCIHQHDLEFTFDFDLERVLDVLADPAAGVKYVGLPLLVNLHY 232
BLAST of NO19G00810 vs. NCBI_GenBank
Match: XP_001420639.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO98932.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 105.1 bits (261), Expect = 8.300e-19 Identity = 59/163 (36.20%), Postives = 97/163 (59.51%), Query Frame = 0
Query: 66 RLTIILTTSPVRSNPDTLLLRRVVHSFSLVPGLSQCP---KIVVCDGFRLASQQSGSRYKKGKILQEEVSNYHAFIENVKQLAEDGEGGFKDMRVEKLEERMGFAGAVHRACCAWVETPFVLVVQHDRLFMTSVDLAAALDVMEARPTQVRYIGLRTAKTKHY 226
R+TII+TTSP R++P T L+ V S + GL+ +VVCDG+++ + ++++ G + +E + NY ++ + L+E +G + + +L++R GF A+ RA V T +VLV QHDRLF V ++A LD M+A P Q+ Y+G T T++Y
Sbjct: 24 RVTIIITTSPCRAHPSTWLIEEVAASIAGRSGLATATGTRLLVVCDGYKV---RESNKFRAGAVNEEGLKNYETYLSRLVWLSEQSDGALRGAELIRLKQRHGFGHALKRAMMR-VTTEYVLVAQHDRLFTRVVPMSAVLDAMDADP-QINYVGFPTKTTQNY 181
BLAST of NO19G00810 vs. NCBI_GenBank
Match: KOO34219.1 (hypothetical protein Ctob_013661, partial [Chrysochromulina sp. CCMP291]) HSP 1 Score: 97.4 bits (241), Expect = 1.700e-16 Identity = 63/184 (34.24%), Postives = 98/184 (53.26%), Query Frame = 0
Query: 53 SLPAFSSSSRLAHRLTIILTTSPVRSNPDTLLLRRVVHSFSLVPGLSQCPKIVVCDGFRLASQQSGSRYKKGKILQEEVSNYHAFIENVKQLAEDGEG----------GFKDMRVEKLEERMGFAGAVHRAC-CAWVETPFVLVVQHDRLFMTSVDLAAALDVMEARPTQVRYIGLRTAKTKHY 226
S + SS++ L ++T+IL TS + P T L+ + SF+ VPGL C ++VCDG+ +S++ R K G+++ E+ + Y A+I+ +++L + V LE GF AV A V T ++LVVQHDR FM D+A A+ M+A VRY+ L T T+H+
Sbjct: 63 SSASLSSAAELCSKVTVILVTSFTPACPATALIEATLASFAFVPGLELCSTVIVCDGYVASSKR---RTKAGRLISEDEAPYRAYIDALRKLVDTARSSTPAGASLPPALARASVLALESHHGFGWAVKAALESGLVRTHYILVVQHDRAFMRPFDMARAIGCMQA-DEDVRYLLLPTRSTRHH 242
BLAST of NO19G00810 vs. NCBI_GenBank
Match: XP_002503121.1 (predicted protein [Micromonas commoda] >ACO64379.1 predicted protein [Micromonas commoda]) HSP 1 Score: 95.5 bits (236), Expect = 6.600e-16 Identity = 68/209 (32.54%), Postives = 104/209 (49.76%), Query Frame = 0
Query: 58 SSSSRLAHRLTIILTTSPVRSNPDTLLLRRVVHSFSLVPGLSQCPKIVVCDGFRLASQQSGSRYKKGKILQEEVSNYHAFIENVKQLAEDGEGGFKDMRVEKLEERMGFAGAVHRACCAWVETPFVLVVQHDRLFMTSVDLAAALDVMEAR--------PTQVRYIGLRTAKT---KHYVEEKEEMLVHTFNGEDEKRGEEAGSRGRRG 256
S+ S RLTI+LTTSP++++P T L+ V S +++ GL KI+V DG ++ + +++ G E +SNY ++ ++ L + + + L+ER GFA A+ R V TPFVLV QHDR F+ V+++ LDVME +V Y+G T T K YV K + V + + GR G
Sbjct: 13 STPSLHPDRLTIVLTTSPIKTHPSTRLIEEVFESIAVLAGLGDSRKIIVADGVKV---REHDKFRSGICTPEAMSNYRHYLSRLEALTKTEGSPLRGAELLVLDERHGFAHALRRGLMR-VATPFVLVAQHDRSFVRPVEVSHVLDVMETANEHTVCTDSGRVNYVGFPTTTTLSHKTYVASKYGLAVEPVTRDVPDPKVDGSKPGRSG 217
BLAST of NO19G00810 vs. NCBI_GenBank
Match: EJK58176.1 (hypothetical protein THAOC_21723 [Thalassiosira oceanica]) HSP 1 Score: 94.7 bits (234), Expect = 1.100e-15 Identity = 61/187 (32.62%), Postives = 93/187 (49.73%), Query Frame = 0
Query: 67 LTIILTTSPVRSNPDTLLLRRVVHS-FSLVPGLSQCPKIVVCDGFRLA--------SQQSGS---------------RYKKGKILQEEVSNYHAFIENVKQLA--EDGEGGFKDMRVEKLEERMGFAGAVHRACCAWVETPFVLVVQHDRLFMTSVDLAAALDVMEARPTQVRYIGLRTAKTKHYVE 228
LT+I+TTSPVRSNP T LL + + F G +CPK+V+CDG R+ ++SG+ + G ++ SNY F ++++ D F + V +LEER G+ A+ A V TP+V V+QHDR FM + + VM + P V+Y+G+ +YV+
Sbjct: 22 LTVIVTTSPVRSNPSTALLEQTFSTFFHAGKGFLECPKVVICDGCRILEGEEKKDDGEESGAGCPPKVTRKYSNIKQNLRNGIASTDQASNYTEFKRRLREICCEADVSSPFFNTSVVELEERQGYGFALRHALRHCVSTPYVCVIQHDRTFMRETPIDEVIQVMLSNP-GVKYVGINQKSNLNYVD 207
BLAST of NO19G00810 vs. NCBI_GenBank
Match: EJK76120.1 (hypothetical protein THAOC_02136 [Thalassiosira oceanica]) HSP 1 Score: 94.7 bits (234), Expect = 1.100e-15 Identity = 61/187 (32.62%), Postives = 93/187 (49.73%), Query Frame = 0
Query: 67 LTIILTTSPVRSNPDTLLLRRVVHS-FSLVPGLSQCPKIVVCDGFRLA--------SQQSGS---------------RYKKGKILQEEVSNYHAFIENVKQLA--EDGEGGFKDMRVEKLEERMGFAGAVHRACCAWVETPFVLVVQHDRLFMTSVDLAAALDVMEARPTQVRYIGLRTAKTKHYVE 228
LT+I+TTSPVRSNP T LL + + F G +CPK+V+CDG R+ ++SG+ + G ++ SNY F ++++ D F + V +LEER G+ A+ A V TP+V V+QHDR FM + + VM + P V+Y+G+ +YV+
Sbjct: 278 LTVIVTTSPVRSNPSTALLEQTFSTFFHAGKGFLECPKVVICDGCRILEGEEKKDDGEESGAGCPPKVTRKYSNIKQNLRNGIASTDQASNYTEFKRRLREICCEADVSSPFFNTSVVELEERQGYGFALRHALRHCVSTPYVCVIQHDRTFMRETPIDEVIQVMLSNP-GVKYVGINQKSNLNYVD 463
BLAST of NO19G00810 vs. NCBI_GenBank
Match: OQR97920.1 (hypothetical protein ACHHYP_09436 [Achlya hypogyna]) HSP 1 Score: 94.7 bits (234), Expect = 1.100e-15 Identity = 64/200 (32.00%), Postives = 97/200 (48.50%), Query Frame = 0
Query: 56 AFSSSSRLAHRLTIILTTSPVRSNPDTLLLRRVVHSFSLVPGLSQCPKIVVCDGFRLASQQSGSRYKKGKILQEEVSNYHAFIENVKQ-------LAE-------DGEGGFKDMRVEK-------------------LEERMGFAGAVHRACCAWVETPFVLVVQHDRLFMTSVDLAAALDVMEARPTQVRYIGLRTAKT 223
A +S L LT++ TTSP+ SNP T+++ V+ SFS VP L++C ++ DG+ + S++K +I EEV Y A+ +N + L+E D E K + L +RMGFA AV R V TPFVL+ QHD F+ +D +A M++ P ++Y+G + KT
Sbjct: 17 AAASPQDLRELLTVVFTTSPIPSNPSTVIVEEVLASFSRVPDLARCNVVLTFDGYVTKEGEGSSKFKSVRISAEEVEQYQAYQQNAIEVFRRHLGLSETAVRETFDDEFQIKRRTTARASILREMEPATGATFTAITLSKRMGFALAV-REALKHVHTPFVLIHQHDWTFLHPIDASAICSAMQSLPETIKYVGFHSRKT 215 The following BLAST results are available for this feature:
BLAST of NO19G00810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00810 ID=NO19G00810|Name=NO19G00810|organism=Nannochloropsis oceanica|type=gene|length=2386bpback to top protein sequence of NO19G00810.1 >NO19G00810.1-protein ID=NO19G00810.1-protein|Name=NO19G00810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=670bpback to top Synonyms
Publications
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