NO19G00760, NO19G00760 (gene) Nannochloropsis oceanica

Overview
NameNO19G00760
Unique NameNO19G00760
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3748
Alignment locationchr19:262485..266232 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:262485..266232 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G00760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G00760.1NO19G00760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G00760.1NO19G00760.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G00760 ID=NO19G00760|Name=NO19G00760|organism=Nannochloropsis oceanica|type=gene|length=3748bp
ATGAATGGTGGAGGAGGAGGGGGCCCAAGAGGAGGAGGAGGTGTGGGGGG
AGGGATGATGAATGGAGGTGTACATCATCATTATCAGCAGTACCACCACC
ATCACCAGCAGCAGCAACAGTCACAAGGCAGTCAGTCCTTTCCGTCCCCA
TCCTCCTCCTCGTCCTCATCCTCTTCGTCTTTCCAGCCGTCACACCTCCC
CCCTCACCACTTGGGAGGTGGAGGGAGGGAGGGAGGAGGAGGGCCCTATG
TGTATATGAATGGAGGAGGTGGAGGAGGGATGTACGTGGTGCCGAATGGC
ATGACCCCCGTCTACGGAGGAGGGGGAGGAAGAGGGGGAGGAAGGGGCGG
AGGAAGGGGCGGAGGTGTGTTTCAGTACATGAATTCCGGATATGTAGGAG
GGGGAGGCAGAGGAGCGGGGGGGGGGGGGGAAGAGGAGCAGGAGGACAGC
AGCAGCAGCATCACCATGGGGCGGGTCCAATACCGgtagctgtgtcaggc
agtggagggggagggggaggggggatatatggaggagggtatggaggagg
aggggggtttcgaggagggagaggaggaggagggaatggcggaggggggg
aggaagggggatatgctggtgcagGGCCCGGCCATTTGGCACCTCTGCAT
ATGGCGTACGGAGGCATGGTGCCTCCGCCTATCGTAGTGGGAGGAGGAGG
AGGGGGGAAGGGGGGGGGGGGTTACAGCAGCAGCAGCAGCAGCAGCAAGG
AGGTGGAGGATTCTACCAGCAACAGCAACAGCAGCTCCCGCGGCAGTATT
ATATGCACCCACAGCACCCTCAACAGCAGCATCAGCACCCTCAACAGCAG
CATCAGCATCATCACCAGCAGCAGCAGCAGCAGGGATTGACGCCGACTGT
GGCGCATACCACCTCTCCCTCCTCGTTGTCCTCGTCGTCCTCCTTCCCCT
TGATGAGCAGCAGCGCGAACGGCTCTCAAAAGATGGACGGTGGCAACAAC
AGCAGCAGCAGTAGTAGCGCGACGCCTACTCCCACCGCTACAGCCACAAC
AGGAGTAGGAGGCGGAGTAGGAGGGGGGGAGGGAGGAAACGCTTCCGGAA
CGTCCACTTCGGCGAAGAAAAAGAAGAAGAAGAAGAATAATGCTGCGGCG
GCTGCTGCAGCCGCCGCTGCTTCTGTTCCAGGCGGTAGTGGTCCAGTCTC
TCTACAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGTGGTGGGGGAAG
AAGGGAGGGAGGCGAGGAGCTGGCACCGGCGATGCTTTCCTCGCCGGCTG
CTGCCTCTGCAGCAACAACAACGACGACCAATAGCAACAGCAGCAGCAGC
AGCAGTGGTAGGAGCAACAGTACTAGTGTTGTTGCTGGTGGTGGTGGAAG
TGAGGGGGGAGAGAAGGCGGTTGGGACGGTTAAGGCCAACCTCTCAGCAG
AAGGAAAGAAGAGGGGGGGATCAGAACAACAGCAACAGCACCAGCACCAG
CAGGAGTATCCTGGCCAGGGAAAGAAGGAGAGTGGCGCTGAGAAGGAAAA
GGAAGGAGGAGCGCCGAAGGGCACCAGCAGCAACAGCAGCAGCAGCAGCG
GCAGCAACCATCGAAAGGCGACTTCCGGTATGGCTGGAGGAGGGAAAAAA
GACCGAGGCGACAAGGGTGGTGCGTCTGCCCCTCCTCCTCCCCCTCCTCC
GGTTCCGCCGGTTATGACAGCGGCTCATTTCCCCCCCCTGCCCGGTGGGG
AGGGAGGAAAAGAGGGAGGGATCGCGGTTTCCTCCTCGGCTGCTGCTTCC
ACTGCGTCGTCCACCGTCACCACCAAGGCGGGCGAAAGCAGCAGCTTTGC
GGCCGCTTTGTTGGCGCGAAGCAGCAACAGTGGCAGCAGTGGCAGCAGTG
GCAGCAGTGGCAGCAGCAGCAGCAGCAACGCTGGTCCAGCCCCCTTGCCT
TCCTCTCCCTCCCTCTCACCCTCGACATCGACGGCAGGGAAGTCACGTCC
TCATGTAAAGGGTGAGGAAAAAACAGCGGTGGCGAGGAAAGAGGAGGAGG
GGGGGAAGGAAGAGGGAGGAAGGGAGGGAGGGATGGCTCCGACCACCAGT
AGTGAAGAGAAAGAAGCGGGAGGAGGGTGGGGTGCAGGGACGGGAGCAGC
AGCAGCACTCGCCGCAGCGCGAGAAGGAGGAGGAGAAGGCGGAGAAGGAG
AAGGACGTGTGACATCACCTGAAGGAGGCCCTTCGATGATAGGGGAAGGA
GTGAAGGAAGGAGGGAAGGAGGGAAGGATTGAGGGAGCAACGACAACGGC
AAACGCGGCAGCTGCGCCTGTGTCTGAGAGGACTGAAGAAGAGATATCAA
AATCTGCTTCTGCAGCTCCCACCATCACCACCACCGCCAGCAGGAGCAGC
AGCAACAGGAGCAGCAGCAGCAGCAGCACTCCTTCCACCACCACCACCAC
AAGCAGCAACATGAGCAACAGCAACACACCTACTCCTGCGGAAGCTTCTG
CCAGCGGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAG
CCCAAAGTCTTCTCTTGGGCTGCTGCTGTCCTTCATGGAGGAGGCGGAGG
GGGTAGCAGCAACAGCACTAGCAGCAACAGCAAGATCACCAGCTCCTCCT
CAGGCGCTATTGCTGTATCTTCTCCTACCACTGCAGCAGCCGCTGCTTCT
ACTGCAGCCACTTCTCCTTCCTCCTCTTCCTCCCTCCCTTCCTCCTCCTC
GTCCGCAGCGCGCCACGGGAAGGAAGGTGGGGCGCGTGAGATACGGGAAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACGAGGACGGGAAGC
AGGAAGAGGAGATCGGGGCGAACGCAGTGAGCGAGGGGGGAAGGAAGGAG
GGAGGAAAGGAGGGAAGGAAGGAGGGAGGGAAGGAGGGAGGGGTGGAGGG
GAGCGTCGTCCTTCCTCGTCCTCCTCATCCTCCCACCGCGGAGCCGAACA
AGAGGATGAAAATCGTAGCGGTGGTGGCAGACAGCAGCAGCAGCAGCAGA
AGGTCATACCTCCCCCTACGTGGGGAAACAAGAAGTCGTTCGTCGATGTA
CTCTTGAAGAAGGACGAGCCTGCCTCGTCCTCTCTCTTGCCCTCCTCCCC
TCCTTCCGCCCCGGTGGCTTCGGAATCTACAACAGGATCCCAGGTgttga
aatctctatagagtcaatgaaaagagggaggaaaagcgggaacaggatgg
gtgtttttttttgtttttttttttttttaaaattaggttgaataaatata
catagaaaagggacgggaagatatatacaagggtctactgagaatgcagg
cagagagaatgagggagagaagaatggagggagggatcttttttagacga
tagtggattgagtgtgataaaagagaaagagagattcaagatgatctctg
aagAGCGGGAAAAGACAAAAGAAGCAGTGGTAGCATAATCAGTAGTAGTA
GCAGCAGTACTTGTAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGC
AGCAGCAGTAGCAGCAGTGGCAGCGGTAGCACTAAAAGCAAAAAATGA
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protein sequence of NO19G00760.1

>NO19G00760.1-protein ID=NO19G00760.1-protein|Name=NO19G00760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1117bp
MNGGGGGGPRGGGGVGGGMMNGGVHHHYQQYHHHHQQQQQSQGSQSFPSP
SSSSSSSSSSFQPSHLPPHHLGGGGREGGGGPYVYMNGGGGGGMYVVPNG
MTPVYGGGGGRGGGRGGGRGGGVFQYMNSGYVGGGGRGAGGGGEEEQEDS
SSSITMGRVQYRARPFGTSAYGVRRHGASAYRSGRRRRGEGGGGLQQQQQ
QQQGGGGFYQQQQQQLPRQYYMHPQHPQQQHQHPQQQHQHHHQQQQQQGL
TPTVAHTTSPSSLSSSSSFPLMSSSANGSQKMDGGNNSSSSSSATPTPTA
TATTGVGGGVGGGEGGNASGTSTSAKKKKKKKNNAAAAAAAAAASVPGGS
GPVSLQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGRREGGEELAPAMLSSPAAASAATTTTTNSNSSSSSSGRSNSTSVVAG
GGGSEGGEKAVGTVKANLSAEGKKRGGSEQQQQHQHQQEYPGQGKKESGA
EKEKEGGAPKGTSSNSSSSSGSNHRKATSGMAGGGKKDRGDKGGASAPPP
PPPPVPPVMTAAHFPPLPGGEGGKEGGIAVSSSAAASTASSTVTTKAGES
SSFAAALLARSSNSGSSGSSGSSGSSSSSNAGPAPLPSSPSLSPSTSTAG
KSRPHVKGEEKTAVARKEEEGGKEEGGREGGMAPTTSSEEKEAGGGWGAG
TGAAAALAAAREGGGEGGEGEGRVTSPEGGPSMIGEGVKEGGKEGRIEGA
TTTANAAAAPVSERTEEEISKSASAAPTITTTASRSSSNRSSSSSSTPST
TTTTSSNMSNSNTPTPAEASASGSSSSSSSSSSSSSKPKVFSWAAAVLHG
GGGGGSSNSTSSNSKITSSSSGAIAVSSPTTAAAAASTAATSPSSSSSLP
SSSSSAARHGKEGGAREIREGGGGGGGGGGGGGGGGGGGGGGGGGGGGGR
GREAGRGDRGERSERGGKEGGRKGGKEGGREGGRGGGERRPSSSSSSSHR
GAEQEDENRSGGGRQQQQQQKVIPPPTWGNKKSFVDVLLKKDEPASSSLL
PSSPPSAPVASESTTGSQVAGKDKRSSGSIISSSSSSTCSSSSSSSNSSS
SSSSSSSGSGSTKSKK*
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Synonyms
Publications