NO19G00730, NO19G00730 (gene) Nannochloropsis oceanica

Overview
NameNO19G00730
Unique NameNO19G00730
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3765
Alignment locationchr19:258647..262411 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:258647..262411 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G00730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G00730.1NO19G00730.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G00730.1NO19G00730.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G00730 ID=NO19G00730|Name=NO19G00730|organism=Nannochloropsis oceanica|type=gene|length=3765bp
CCTCCCTCCCTCCTCCCTGCCCTCCTCCCCCTCCCGAAAAAAAGGCCTTA
TTGATCACATTTTCGCTCTTCAGGCGGGCCTTCACCACCCCTCCCTCCCA
CAGCATCTCCCTGAGCTTTTCCAGCGCCTTTTTTGCGTCCTTCTCTGTCG
CAAACAAGACGAACCACGTGTTCTCCACATCCTTCTTCAAAGCCCTCACC
TCTGGACACCCATCCCACGAAAACAATTTCTGCTTCAACTCCTCCTCAGG
CGTGTTGCTACTCACCTCTCGGAGGATGATAGTCGTTCTTTCGACGTGGA
TGTTGGGCCGCACGCTGCTTTGGTCCTCGCTCAGGGCAAGGGTGGGATGG
TCCATGAGGGCGGCGACAAGGAGGGGGGGAGAGGGGGGGAGGGAGGCCAG
GGATGGCAGGGAGGAGAGGATGGAGAGCGGGATGAACATTTGCGGATTCA
TATGTGAGACGAGGAAACCGCCATCTGATTGCAGGTAGGAGAGGGAAAGA
TAGTGCTCAAGGGCTTGACGGGCTGCCGCGATCCGGGCGGGGGTCAAGGC
GGAGAAGGACGAGGAGGAGGACGAGGAGGAGGAAGTGGTGGAGGAGGAAC
GGGGAAGGGGGGGGGGGTGGTAATGGAGGAGCTGCGGACATGAGACGGGA
GAGGGCTGGTGCTGCGGGTGGCATTCGTGCCGGTGCTGGGTTTGGTGGAT
GAGGAGGAGGAGGAAAGCGATGTGGACGAGGACAAGGACGAGGACGAGGG
ACGAGCAGCGGCGCTACTTGGCTTGCCTGCTGCCGCTGCTGCTGCTGCTG
GTTTTGTTGCCGCTGGTTCTGCTGTCGTTGTCGTTGCCTTCTTGTCTGGT
GCAGAGTGCTTGCCATTCTGCTTACAAATCTCATTTGATTTGCTGCTGCT
GGTGCTGCTGCTGGCATCACAACTAGCCGGCACTGCTGCTCCTTCTGCTA
CTGCTGCTACAACTGCTGCTACTGCTGCCGGGGCTGTAGGTGCTATGTCG
CTGCTTCTCGTTCCTCCTCCTTCCGCTACTCCGTCTTTATCTCTACTTGG
CGGCATGTCTACGTCGTTGCTGCTGCTATTGCTGCTTCTGACGCTGCTGC
TGCCTTGTGTCTTTTTCTCCGCTGCTGCCGCTGTTTCCACGCTCATAAGC
TCACAGCGCTATTGCTGCTCCTACTGCTACTGCTACTGTTGTTAATCCGG
CTGCTGGTGGCTCGCGAGGAAGGATGAGAATGGAAGAGGATGGATGCTCT
GCACTCCTGGCCTCCTCCGCCGCCTCCTCCAACCTCGATCCTTGCCGTAA
GAAGCTGCTTCTCCTGGTGCACCTCTCTTCCAACTCACTGCCGCGGCGAC
TGATAATGCGCAGAGATGGTGGCGGAAAGCAGGGATTGCTTAGGGCTGGT
TGGGTGCTGTGATAGTGTGGTGGTGGCGTGTATGAGAGGAGGTGTTGAGA
TGATGCTCGTATCCAGCGCAGTGATGATGGGCAAAGGCCCGCGGCCATCA
CAGCCCTCAAAAGCACTAGAGTACTTGTATTGGCTTTAAGTGAAGACTAT
ACAAACACGTGCTTTGGGTAAAGGTGGCTTATTGGGAGCTTTCTTGCGAG
TGCGGTCGTCTTCATGTTGTGTCCGACGGCAAAGACAAGGGTATGGAGAG
AGAACCCGATGTGAGGCTCCCGTGCAGCCGCCCACGACTCTCAGCACCAA
TGCATGGTCAAAAGCACATGCCACGCCTTTCCACATCTCTGCCTTTGTTC
GTTCTCTATCGTCAGAGTATTCATGATGCTTGGGGTGCGTGTGTGGGCTC
TGCGCGTTCAAATTGGGACTTGCAGAGGACTGGTGAACGGTCTCCGTGTT
TGCATCTCTCGCCACACCCTGTGTTCTTGACTGATGTCCCGAACATACTA
GGCCTCCTGCAGCTCGATCTTCATGCACTAGTATGCTGTCTGGCATTGTT
GTTGCCACAGCTGTGGAGTTACTGCACTTCACGTACTGTTTCTTACCGCA
CAACACACCACAACCACATGAAACGGTGTCGGGGAGGTTTTTGAGTGATG
TGGCGTGGCTTGGGTGTGTCCTGTCCTGTTCTCTCTCCCTCCTCTCTCTT
TGGTGTCACGGCCCGGGCCATATTTACTGCTCTTCTCTGGCCCACACGAC
AGAACATTGCACACCATGCTCCACAGCATTAATATGCAGTCTACTCTTAT
CCCTAACCTTTTGCAATCCCCCACACAGCTTCAGGATATTGCTCTCAAAG
TTCGTGAGGAGGTTGGGCTTACCCTTGTGCCCGGATAGCGCCTTCTCTGC
AACGCAGCAAGTCCCCATCACCATGGCATATGCACAAGAAGCGAAAGGAC
TAGTTCAGGAGAGAGGCCGGACACCGCAGCACGCAGCTCCTCGAGATAAA
AGCCGCCGCTGGCTTATGGATTATCACTCCCCCAAGGATGTGCTTCCCTT
TGCCGGCCGACGCCACCGGCAAGAAGTGCAAGAACAGCGAGAAAGACGAC
AAGGGCAGGCCTCCTCGGGCTCGGGTCGGGGGCAACGACAGACAAGGAGC
CGCACGTGGGGACTTTTGGTTGAAGCGGATGCAGCACGTGACAGCAGCAG
CACCATCAGGACCAGCCGTCGTCGTGAAGGGCAAAAAGAGGGGGCGGTTT
CAGAAACATATTTGAGTGAATATCAGgtgggcctttttcccacctctccg
tctgtgttcccttttctccctctctctatgtctatgtcttcttttgtaga
ccctgtcattcgttctgtctgccgccgtctcttcaacgtttcccgatcat
ggccctctactttactgatacatctgtactcaaattaacgcttgtctctc
ccttcttctatttttcccgcacagAGGAGTTTCCTGTGGCCGGGAGAGCT
GGATGATCCCGGGAAGAAACAGGGCGAGGACGAAGGCGGGGTAAAAATGG
AAGAGCGCAGCGGAGCAGCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTTC
TCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCTGTATTTTCCTCCCT
CAGCAACGGAACATATGCCAGCGAGGAGAAGGCGTTTTATATTTCGGACT
CTGATCTAAGCGTGGCCTCCTCTCCTTCCCTCCTTTCCTCCATCTTCCAC
GTCGGTCCTCATGGGGGGAGGGTGGGAGGGGTTGATGAGTGGGATGAGGA
AGAGGGGGAATGGGAGGTGAATGAAGAGGGAGAGGCGGAGGAAGAGGAGA
GGGGAGATGAAGAAAGAGAAGCAAGTAGTGAGGGAGGTGGCCTGGGAGAG
TTAACGTGGTGGGAAGTGTTGGGGGAGAGCCCGCCCCAGGAGTCAGAGGA
GGAAAGGGAGGGAGGAAAGAAGGAGACGAAAGGTAGGAAGATGCCAGTGA
CGGCACATTACACCCATAGCAGCGTTGGTAGTACTAACAGGAGCTCTTTT
TCTTCTAGAAACAACGTGGACCACTTGTGGGAGATATTCAGCTCTTCGGC
GCCACCTCCTCCCCCTCCTTCTTTCTCTCCGCACCCCTCACTCTCCTCAG
TCTCGTACGTGTCGTCCGGCATTGCCGATGAACAGGGATGCAAACGAGGT
GGAAGGCGACGCTATGGGGGAAAGGGAAGACAAGCTTGCTTGAGGGACGA
AATGTCTCAGATCCTCATCAAAGAGCGGGATCCAGGAGCGGACATTTGGG
ATGTACATATGGGATCGAACGGCACGCTTCAACGGCGCCCACGGTGGTGT
GTGTATGGATGTTGA
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protein sequence of NO19G00730.1

>NO19G00730.1-protein ID=NO19G00730.1-protein|Name=NO19G00730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=545bp
MLSGIVVATAVELLHFTYCFLPHNTPQPHETVSGRFLSDVAWLGCVLSCS
LSLLSLWCHGPGHIYCSSLAHTTEHCTPCSTALICSLLLSLTFCNPPHSF
RILLSKFVRRLGLPLCPDSAFSATQQVPITMAYAQEAKGLVQERGRTPQH
AAPRDKSRRWLMDYHSPKDVLPFAGRRHRQEVQEQRERRQGQASSGSGRG
QRQTRSRTWGLLVEADAARDSSSTIRTSRRREGQKEGAVSETYLSEYQRS
FLWPGELDDPGKKQGEDEGGVKMEERSGAASSSSSSSSSFSPSSSSSSSS
SAVFSSLSNGTYASEEKAFYISDSDLSVASSPSLLSSIFHVGPHGGRVGG
VDEWDEEEGEWEVNEEGEAEEEERGDEEREASSEGGGLGELTWWEVLGES
PPQESEEEREGGKKETKGRKMPVTAHYTHSSVGSTNRSSFSSRNNVDHLW
EIFSSSAPPPPPPSFSPHPSLSSVSYVSSGIADEQGCKRGGRRRYGGKGR
QACLRDEMSQILIKERDPGADIWDVHMGSNGTLQRRPRWCVYGC*
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Synonyms
Publications