NO19G00720, NO19G00720 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00720 vs. NCBI_GenBank
Match: EWM23577.1 (deoxyribodipyrimidine photo-lyase [Nannochloropsis gaditana]) HSP 1 Score: 251.1 bits (640), Expect = 4.100e-63 Identity = 161/305 (52.79%), Postives = 200/305 (65.57%), Query Frame = 0 Query: 6 PALRTRGSRLSSTFSSSSSLAALTRLSA-ATASIQPQAERSIVWFTSGDLRLHDNEALSSSLA-------SSSSCIPLFIFDPSFLSTLAPHLLHLYLLAIADLRNTL------SSNLITRIGPVEQILPAVMEETSASSLWVYEDITENQRALVHRGLSSL-SPSSSPSLKI--KKWTTRLRSSITGGTVGNNWEKDYLPAIKGKPIDPPXXXXXXXXXSFSDAI----TDKGRLPSFEELLELAYGHEEDVSPSSLPSSLXPS-SAAAIKQARVHAAREEYWTPTYYPHEAG-NEGGMEGGGG 288 P+L GS +S ++ + R SA +T+S Q +RS+VWFT GDLRLHDNEAL S + IPL I DP+FL+TL+PH LHLYLLA+ DLR++ SS LI R GPVE++LPA++ + A+SLWVYED+TENQR+LV RGLSSL SPSSS S+ I KWTTRLRSS+ GGTVG+NW KDYLP ++ P+DPP XXXX D GR+PSFEELL+L +G EE PSS PS +A+ ++QAR AAREEYWTP+YYP + G E G EG G Sbjct: 53 PSLSCGGSVQLPRGTSPRLVSLIRRFSAGSTSSSQDSIDRSLVWFTRGDLRLHDNEALFKSTSPXXXXXXXXXHIIPLLILDPAFLATLSPHTLHLYLLAVNDLRDSFQRHPHASSPLIVRTGPVEELLPALVHASQATSLWVYEDVTENQRSLVRRGLSSLPSPSSSSSMPITVHKWTTRLRSSVKGGTVGDNWAKDYLPVVQKLPLDPPFPSFPXXXXXXXXXXXWVPEDVGRIPSFEELLQLTFGGEES------PSSPAPSPTASLLRQARALAAREEYWTPSYYPEDQGEGEEGKEGRVG 351
BLAST of NO19G00720 vs. NCBI_GenBank
Match: XP_021730318.1 (uncharacterized protein LOC110697260 [Chenopodium quinoa]) HSP 1 Score: 69.3 bits (168), Expect = 2.200e-8 Identity = 53/156 (33.97%), Postives = 87/156 (55.77%), Query Frame = 0 Query: 18 TFSSSSSLAALTRLSAATASIQPQAERSIVWFTSGDLRLHDNEALSSSLASSSSCIPLFIFDPSFLSTLAPHLLHLYLLAIADLRNTL---SSNLITRIGPVEQILPAVMEETSASSLWVYEDITENQRALVHRGLSSLS--PSSSPSLKIKKWTT 169 +FS SS +L+A T + ++VWF DLR+ D+ + S+ ++ S+ +P+++FDP LS ++ L LLA+ DLR +L SNL+ R G VE IL +++E A+ L+ E++ + R+LV SL+ P + KI+ W T Sbjct: 26 SFSLSSKTKTKPQLAAQTNN---NGGAAVVWF-KHDLRIDDHPGIVSAASNYSNVVPIYVFDPRILSRFPDEMVELLLLAVEDLRRSLKEHGSNLMIRSGNVESILSELVKEIKATVLFAEEEVEYDMRSLVATVDDSLATDPVLDWNPKIEVWRT 177
BLAST of NO19G00720 vs. NCBI_GenBank
Match: EOY22929.1 (Hydrolase, putative isoform 1 [Theobroma cacao]) HSP 1 Score: 68.2 bits (165), Expect = 4.900e-8 Identity = 42/117 (35.90%), Postives = 68/117 (58.12%), Query Frame = 0 Query: 45 SIVWFTSGDLRLHDNEALSSSLASSSSCIPLFIFDPSFLSTLAPHLLHLYLLAIADLRNTL---SSNLITRIGPVEQILPAVMEETSASSLWVYEDITENQRALVHRGLSSLSPSSS 159 +I+WF DLRL D+ AL ++ + S +PL++FD LS + +L L L A+ DLRN+L SNL+ R G E ++ +++E A+ ++V E++ R +V +L SSS Sbjct: 46 AILWF-KHDLRLDDHPALVAAAETHRSLLPLYVFDHRILSRYSDEMLELVLFALEDLRNSLKEQGSNLMIRFGSAENVITELVKEVKATDVFVEEEVEYEMRQIVGVVKDTLETSSS 161
BLAST of NO19G00720 vs. NCBI_GenBank
Match: EOY22930.1 (Hydrolase, putative isoform 2 [Theobroma cacao]) HSP 1 Score: 68.2 bits (165), Expect = 4.900e-8 Identity = 42/117 (35.90%), Postives = 68/117 (58.12%), Query Frame = 0 Query: 45 SIVWFTSGDLRLHDNEALSSSLASSSSCIPLFIFDPSFLSTLAPHLLHLYLLAIADLRNTL---SSNLITRIGPVEQILPAVMEETSASSLWVYEDITENQRALVHRGLSSLSPSSS 159 +I+WF DLRL D+ AL ++ + S +PL++FD LS + +L L L A+ DLRN+L SNL+ R G E ++ +++E A+ ++V E++ R +V +L SSS Sbjct: 46 AILWF-KHDLRLDDHPALVAAAETHRSLLPLYVFDHRILSRYSDEMLELVLFALEDLRNSLKEQGSNLMIRFGSAENVITELVKEVKATDVFVEEEVEYEMRQIVGVVKDTLETSSS 161
BLAST of NO19G00720 vs. NCBI_GenBank
Match: XP_021725782.1 (uncharacterized protein LOC110692994 [Chenopodium quinoa]) HSP 1 Score: 68.2 bits (165), Expect = 4.900e-8 Identity = 51/157 (32.48%), Postives = 87/157 (55.41%), Query Frame = 0 Query: 18 TFSSSSSLAALTRLSAA-TASIQPQAERSIVWFTSGDLRLHDNEALSSSLASSSSCIPLFIFDPSFLSTLAPHLLHLYLLAIADLRNTL---SSNLITRIGPVEQILPAVMEETSASSLWVYEDITENQRALVHRGLSSLSPSS--SPSLKIKKWTT 169 +F+ + SL++ T+ TA ++VWF DLR+ D+ + S+ ++ S+ +P+++FDP LS ++ L LLA+ DLR +L SNL+ R G VE IL +++E A+ L+ E++ + R+LV SL+ + KI+ W T Sbjct: 38 SFNRTFSLSSKTKTKPQFTAQTNNNGGAAVVWF-KHDLRIDDHPGIVSAASNFSNVVPIYVFDPRILSRFPDEMVELLLLAVEDLRRSLKEHGSNLMIRSGNVESILRELVKEIKATVLFAEEEVEYDMRSLVATVDDSLATDAVLDWKPKIEVWRT 193
BLAST of NO19G00720 vs. NCBI_GenBank
Match: KNA10737.1 (hypothetical protein SOVF_141700 [Spinacia oleracea]) HSP 1 Score: 67.8 bits (164), Expect = 6.400e-8 Identity = 37/105 (35.24%), Postives = 66/105 (62.86%), Query Frame = 0 Query: 45 SIVWFTSGDLRLHDNEALSSSLASSSSCIPLFIFDPSFLSTLAPHLLHLYLLAIADLRNTL---SSNLITRIGPVEQILPAVMEETSASSLWVYEDITENQRALV 147 ++VWF DLR+ D+ + S+ ++ ++ +P+++FDP LS ++ L +LA+ DLR +L SNL+ R G VE IL +++E A+ L+ E++ + R+LV Sbjct: 49 AVVWF-KNDLRIDDHPGIVSAASNHANVVPIYVFDPRILSRFPDEMVELLILAVEDLRRSLKEHGSNLMIRFGNVENILWELVKEIKATVLFAEEEVEYDLRSLV 152
BLAST of NO19G00720 vs. NCBI_GenBank
Match: XP_007038428.2 (PREDICTED: uncharacterized protein LOC18605386 [Theobroma cacao]) HSP 1 Score: 67.8 bits (164), Expect = 6.400e-8 Identity = 41/117 (35.04%), Postives = 68/117 (58.12%), Query Frame = 0 Query: 45 SIVWFTSGDLRLHDNEALSSSLASSSSCIPLFIFDPSFLSTLAPHLLHLYLLAIADLRNTL---SSNLITRIGPVEQILPAVMEETSASSLWVYEDITENQRALVHRGLSSLSPSSS 159 +I+WF DLRL D+ AL ++ + S +PL++FD LS + +L L L A+ DLRN+L SNL+ R G E ++ +++E A+ ++V E++ R ++ +L SSS Sbjct: 46 AILWF-KHDLRLDDHPALVAAAETHRSLLPLYVFDHRILSRYSDEMLELVLFALEDLRNSLKEQGSNLMIRFGSAENVITELVKEVKATDVFVEEEVEYEMRQIIGVVKDTLETSSS 161
BLAST of NO19G00720 vs. NCBI_GenBank
Match: OMO85847.1 (hypothetical protein CCACVL1_09967 [Corchorus capsularis]) HSP 1 Score: 67.4 bits (163), Expect = 8.400e-8 Identity = 41/117 (35.04%), Postives = 69/117 (58.97%), Query Frame = 0 Query: 45 SIVWFTSGDLRLHDNEALSSSLASSSSCIPLFIFDPSFLSTLAPHLLHLYLLAIADLRNTL---SSNLITRIGPVEQILPAVMEETSASSLWVYEDITENQRALVHRGLSSLSPSSS 159 +I+WF DLRL D+ AL+++ + S +PL++FD L+ + +L L L A+ DLRN+L SNL+ R G E ++ +++E A+ ++V E+I R ++ +L SSS Sbjct: 46 AILWF-KHDLRLDDHPALAAAAETHRSVLPLYVFDHRILARYSDEILELVLFALDDLRNSLKEHGSNLMIRFGSAENVITELVKEVKATDVFVEEEIEYEMRQMIGVVKDTLEMSSS 161
BLAST of NO19G00720 vs. NCBI_GenBank
Match: XP_021842220.1 (uncharacterized protein LOC110782386 [Spinacia oleracea]) HSP 1 Score: 66.6 bits (161), Expect = 1.400e-7 Identity = 37/105 (35.24%), Postives = 65/105 (61.90%), Query Frame = 0 Query: 45 SIVWFTSGDLRLHDNEALSSSLASSSSCIPLFIFDPSFLSTLAPHLLHLYLLAIADLRNTL---SSNLITRIGPVEQILPAVMEETSASSLWVYEDITENQRALV 147 ++VWF DLR+ D+ + S+ ++ + +P+++FDP LS ++ L +LA+ DLR +L SNL+ R G VE IL +++E A+ L+ E++ + R+LV Sbjct: 49 AVVWF-KHDLRIDDHPGIVSAASNHTDVVPIYVFDPRILSRFPDEMVELLILAVEDLRRSLKEHGSNLMIRFGNVENILWELVKEIKATVLFAEEEVEYDLRSLV 152
BLAST of NO19G00720 vs. NCBI_GenBank
Match: KPL74503.1 (deoxyribodipyrimidine photolyase [Bellilinea caldifistulae]) HSP 1 Score: 65.9 bits (159), Expect = 2.400e-7 Identity = 40/96 (41.67%), Postives = 52/96 (54.17%), Query Frame = 0 Query: 47 VWFTSGDLRLHDNEALSSSLASSSSCIPLFIFDPSFLSTLAPHLLHLYLLAIADLRNTL---SSNLITRIGPVEQILPAVMEETSASSLWVYEDIT 140 +W+ DLRL DN AL S+L S +PLFI DP L+T A + H + L L S LI R G E++LPAV+ ET A ++ ED T Sbjct: 14 IWWIRRDLRLKDNPALHSALQGGHSVLPLFILDPRLLNTAAENRRHFLFNGLRRLDEDLRSRGSRLIVRSGLPEEVLPAVVAETGADGVFAEEDYT 109 The following BLAST results are available for this feature:
BLAST of NO19G00720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 13
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00720 ID=NO19G00720|Name=NO19G00720|organism=Nannochloropsis oceanica|type=gene|length=876bpback to top protein sequence of NO19G00720.1 >NO19G00720.1-protein ID=NO19G00720.1-protein|Name=NO19G00720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=292bpback to top Synonyms
Publications
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