NO19G00700, NO19G00700 (gene) Nannochloropsis oceanica

Overview
NameNO19G00700
Unique NameNO19G00700
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3224
Alignment locationchr19:251144..254367 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:251144..254367 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004222metalloendopeptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR037219Peptidase_M41-like
Homology
BLAST of NO19G00700 vs. NCBI_GenBank
Match: EWM23573.1 (hypothetical protein Naga_101506g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 339.7 bits (870), Expect = 2.200e-89
Identity = 163/255 (63.92%), Postives = 205/255 (80.39%), Query Frame = 0
Query:  177 VQRDFDAFLTEGKDVLGLIDLLKAHESAITISRTQLTSLLDVLSHTQTFRDNLLDRRARGLLPPNERGSLFLPXXXXXXXXXXFMANPGRAFMYLEEYQQAQLESITYVYSVLKKRGLLKAFACIQEVRGYQENYLPKNVDAEMIETRSEGLPMSALTPGQAQNFWAYGGVALCLLELAICRFYGVDAGAVIPGTIAAFFLDRFVGGGRVFDAFARVLLPRYKERIIRHEAGHFLMAYLLGCPVQDCLLRPVFNG 432
            VQR FDA + EGKD+LGL+D LK+H++ I I+R Q++ +LD L+ TQ  R+NL+DR+A+G++P  E+G +  P          F   PGRAFM LEE+Q+ QLE+IT  Y++LK +GLL+ +ACI + RGY E+YL K+VD ++IE R+ GLPMSALTPGQAQN WAY GVALC+LELAIC+FYGVDAGAVIPGT+  FF+DRF+ GGR FDA ARV+LPRYKERIIRHEAGHFL+A+LLGCPVQDC+LRPVFNG
Sbjct:  135 VQRKFDALVEEGKDLLGLVDYLKSHQTEIHITRPQVSLMLDKLADTQVVRENLMDRQAKGVVPVREKGMVANP--------NDFFQAPGRAFMPLEEFQKVQLEAITDTYAILKSKGLLRGYACISDQRGYSESYLSKSVDGDVIEQRTGGLPMSALTPGQAQNLWAYSGVALCVLELAICKFYGVDAGAVIPGTLLGFFVDRFLLGGRGFDALARVVLPRYKERIIRHEAGHFLLAHLLGCPVQDCVLRPVFNG 381          
BLAST of NO19G00700 vs. NCBI_GenBank
Match: EWM23569.1 (stress regulated protein [Nannochloropsis gaditana])

HSP 1 Score: 294.3 bits (752), Expect = 1.000e-75
Identity = 185/308 (60.06%), Postives = 223/308 (72.40%), Query Frame = 0
Query:  430 NGATFGEAGTIFLDKTLFEQLEKSKISASSIDRYTTIVMGGIAAEALEFKNAQGGASDEQAIILLMSLMNFPVDRISTQARWAALRAVLVLKDNPEAFEALVAALSAGKTVGACVQAIEDAMATTNRPFVPXXXXXXXXXXXRLP-----VKEYTDIQKVLMPSLPPSLLDSVADFSSITPSFTKGEDVIPKMEAKEKRFADAAEQKLKSRQREVNIRLQQVTARLEGKTPEEVLEIGNRTGTGEGGREGGXXXGEMVSDE-DEEK----QIEQQLNALDQRLKELNEKLGNG----GAGRGVRRGRQ 724
            +GATFGEAGTIFLD+TLFEQLEK+K+SASS+DRY+TIVMGGIAAEAL F+NAQGG+SDEQA+ILLMSL+ FP+DRIS QARWAALRAVLV+KD PEA+EALVAAL AGK+VG CV AIEDA+  T+RP VP     XXXXXX         KE+ D+Q+VLMPSLPPSL +  AD S++TPSFTKG DVIP +EA+EK+   A E++LK+RQR VN RL+QVTA+LEGK+PEEV        +G GG E      E+  +E DEEK                  +L  ++G G    G GR  R GR+
Sbjct:   62 SGATFGEAGTIFLDQTLFEQLEKAKVSASSLDRYSTIVMGGIAAEALTFQNAQGGSSDEQALILLMSLLGFPLDRISNQARWAALRAVLVIKDYPEAYEALVAALQAGKSVGQCVLAIEDALEATDRPLVPLPAVGXXXXXXXXXXXXXGAKEFADLQRVLMPSLPPSLAN--ADLSNLTPSFTKGTDVIPAVEAREKKQLAALEEQLKARQRAVNFRLKQVTAQLEGKSPEEV--------SGMGGEEEIQGKIELRGEEMDEEKXXXXXXXXXXXXXXXXXXQLGGRVGEGTWEEGGGRDKRMGRR 359          
BLAST of NO19G00700 vs. NCBI_GenBank
Match: CBJ28498.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 205.3 bits (521), Expect = 6.400e-49
Identity = 115/283 (40.64%), Postives = 173/283 (61.13%), Query Frame = 0
Query:  280 ESITYVYSVLKKRGLLKAFACIQEVRGYQENYLPKNVDAEMIETRSEGLPMSALTPGQAQNFWAYGGVALCLLELAICRFYGVD-AGAVIPGTIAAFFLDRFVGGGRVFDAFARVLLPRYKERIIRHEAGHFLMAYLLGCPVQDCLLRP--VFNGATFGEAGTIFLDKTLFEQLEKSKISASSIDRYTTIVMGGIAAEALEFKNAQGGASDEQAIILLMSLMNFPVDR--ISTQARWAALRAVLVLKDNPEAFEALVAALSAGKTVGACVQAIEDAMATTNRP 558
            +++T  Y+ LK  GLL+ F  I   +G       ++V AE + + S G+    L PG+    W   GV +   E       G+D    VIP T+   F DR +  G + ++  R+++P Y+ERIIRHEAGHFL+AYLLGCPVQ CLL P  + +G T  + GT+F D  L +Q+   K++ SSIDR++ ++MGGIAAEA+ + N++GG++DE  +I ++S +  P DR  I +QA WAA +AVL+++++ EA+E LV AL +G  +G CV  +E  +A    P
Sbjct:  170 DNLTNTYNALKAAGLLRGFGSIDFSKGPSSQ--SRDVSAEKLLSLS-GVEKQNLAPGRPTGSWLAAGVGVFGAEYLAGILMGLDPLQTVIPWTLGLIFADRLLLNGALSESLTRLIVPAYRERIIRHEAGHFLVAYLLGCPVQACLLDPFVLGSGLTGAQGGTVFADPVLSKQMADGKLTKSSIDRFSIVLMGGIAAEAINYGNSEGGSADEGVMIGILSTIAPPFDREQIKSQALWAATQAVLLIQEHKEAYEVLVNALESGAELGECVTIVEAELAKRELP 449          
BLAST of NO19G00700 vs. NCBI_GenBank
Match: XP_005831184.1 (hypothetical protein GUITHDRAFT_87555, partial [Guillardia theta CCMP2712] >EKX44204.1 hypothetical protein GUITHDRAFT_87555, partial [Guillardia theta CCMP2712])

HSP 1 Score: 187.6 bits (475), Expect = 1.400e-43
Identity = 95/227 (41.85%), Postives = 146/227 (64.32%), Query Frame = 0
Query:  330 MSALTPGQAQNFWAYGGVALCLLELAICRFYGVD-AGAVIPGTIAAFFLDRFVGGGRVFDAFARVLLPRYKERIIRHEAGHFLMAYLLGCPVQDCLLR--PVFNGATFGEAGTIFLDKTLFEQLEKSKISASSIDRYTTIVMGGIAAEALEFKNAQGGASDEQAII--LLMSLMNFPVDRISTQARWAALRAVLVLKDNPEAFEALVAALSAGKTVGACVQAIEDAM 552
            MSALTP  AQ  W   G+ LC +E  +    G+D    VIP T   F +DR +  G  F++  R L P+YKE++I+HEAGHFL+AYLLGCP+Q   L           G+AGT+F D  L  QL  ++++ ++IDRYT ++MGGIAAEA+ ++ A+GGASDE A++  L+  L  +   ++  QARWA   A+L+L+++  A+++L  A++ G+++G C+  +E+A+
Sbjct:    1 MSALTPKNAQYGWLAAGLGLCTVEYFLALNAGLDPLRTVIPFTAFLFVVDRLLTSGAAFESAYRFLFPKYKEKVIKHEAGHFLLAYLLGCPIQGFFLSAWDATRAGIRGQAGTVFFDNDLSTQLNANRVTRTAIDRYTIVLMGGIAAEAMNYEQAEGGASDESALVSFLVGLLPPWQPQQVLNQARWAVTEAILLLREHRAAYDSLCDAMARGESLGTCISVLENAL 227          
BLAST of NO19G00700 vs. NCBI_GenBank
Match: OSX81269.1 (hypothetical protein BU14_0023s0074 [Porphyra umbilicalis])

HSP 1 Score: 176.4 bits (446), Expect = 3.200e-40
Identity = 106/276 (38.41%), Postives = 165/276 (59.78%), Query Frame = 0
Query:  282 ITYVYSVLKKRGLLKAFACIQEVRGYQENYLPKNVDAEMIETRSEGLPMSALTPGQAQN-FWAYGGVALCLLELAICRFYGVDAGAVIPGTIAAFFL----DRFVGGGRVFDAFARVLLPRYKERIIRHEAGHFLMAYLLGCPVQDCLL--RPVFNGATFGEAGTIFLDKTLFEQLEKSKISASSIDRYTTIVMGGIAAEALEFKNAQGGASDEQAIILLMSLMN--FPVDRISTQARWAALRAVLVLKDNPEAFEALVAALSAGKTVGACVQAIE 549
            +T +Y+ L+KRG L AF C  E         PK VDA  +E R+ GLP+SAL P ++   +W   G+ + +   A+    GV  G   P  +A  FL    D+ +  G VF+   R + P Y E++++HEAGHFL+AYL G PV+  +L     +     G+AGT+F D  L  +L + K+S S+++R++ ++MGGIAAEA+ +  A+GG SDE  ++ ++S ++  +P   +  QARWAAL A+L+L+ +  A++ALV A+ A + +G CV  IE
Sbjct:  131 VTLLYAELQKRGHLAAFGCAAEAG--TRPLGPKVVDAADLEARA-GLPISALAPKRSTGAWWQLAGIGVVVGVNALASAAGVQ-GLAQP-ALAVLFLGWVADQRLARGAVFETLYRAVKPEYAEKVLKHEAGHFLLAYLTGAPVRGYVLSAADAWKAGIPGQAGTVFTDARLEAELRRGKLSGSALERFSIVLMGGIAAEAIAYGQAEGGQSDEAVLVGILSGISPPWPPAAVVNQARWAALEAILLLRQHAAAYDALVDAMRAKRPLGECVAVIE 401          
BLAST of NO19G00700 vs. NCBI_GenBank
Match: EJK47513.1 (hypothetical protein THAOC_33760 [Thalassiosira oceanica])

HSP 1 Score: 165.2 bits (417), Expect = 7.400e-37
Identity = 109/300 (36.33%), Postives = 160/300 (53.33%), Query Frame = 0
Query:  282 ITYVYSVLKKRGLLKAFACIQEVRGYQENYLPKN-----VDAEMIETRS-----EGLPMSALTPGQAQNFWAYGGVALCLLELAICRFYGVDAGAVIPGTIAAFFLDRFVGGGRVFDAFARVLLPRYKERIIRHEAGHFLMAYLLGCPVQDCLLR--PVFNGATFG-------EAGTIFLDKTLFEQLEKSK-ISASSIDRYTTIVMGGIAAEALEFKNAQGGASDEQAIILLMSLMN---------FPVDRISTQARWAALRAVLVLKDNPEAFEALVAALSAGKTVGACVQAIEDAMA 553
            +T +Y +L++ G L  F  I  +        P +      D   I T +       L M +LTP ++ NF  Y G AL +LE  I   + + +  ++  TI    +D+ +  G VF+   R++ P    RI +HEAGHFL AYLLGCPV+  +L      +   FG        AGT + D  L EQ+  +K ++  SIDRY+ IVMGGIAAEALE+  ++GGA DE+A++  +  +N         +  + +  QARW A +AVL+LK+    ++ALV AL  G  +G CV AIE+A A
Sbjct:  134 MTKMYRLLREEGRLNVFGAIGRLPPQSSGLPPPDRPIFPADGSKIITPTLLEEITNLKMLSLTP-ESTNFLLYAGSALAILEGIISLNFDISSNLLVSVTIVLALMDQILVSGAVFETGLRMVNPSLTTRITKHEAGHFLCAYLLGCPVEGVVLSTWAALSDNRFGGRSTAAVSAGTSYYDIDLSEQISGAKPLTRESIDRYSIIVMGGIAAEALEYGRSEGGAGDEEALVRFLRSLNPRSGKAVSQWTPEVVRNQARWGATQAVLMLKEYKPCYDALVDALERGGDLGQCVSAIENAAA 432          
BLAST of NO19G00700 vs. NCBI_GenBank
Match: XP_005706363.1 (hypothetical protein isoform 2 [Galdieria sulphuraria] >EME29843.1 hypothetical protein isoform 2 [Galdieria sulphuraria])

HSP 1 Score: 164.9 bits (416), Expect = 9.600e-37
Identity = 104/307 (33.88%), Postives = 175/307 (57.00%), Query Frame = 0
Query:  269 MYLEEYQQAQLESITYVYSVLKKRGLLKAFACIQ------EVRGYQENYLPKNVDA------------EMIETRSEGLPMSALTPGQAQNFWAY--GGVALCLLELAICRFYGVDAGAVIP---GTIAAFFLDRFVGGGRVFDAFARVLLPRYKERIIRHEAGHFLMAYLLGCPVQDCLLR--PVFNGATFGEAGTIFLDKTLFEQLEKSKISASSIDRYTTIVMGGIAAEALEFKNAQGGASDEQAIILLMSLMNFP--VDRISTQARWAALRAVLVLKDNPEAFEALVAALSAGKTVGACVQAIE 549
            + L+ +   Q++ +  VY  LKK+  LKAF+ I       E   Y  N +P  +D             +++ET    +P+ AL P ++Q+ ++Y   GV   L  +     + ++   + P     +  F  D+    G +F+   + L P YK+++++HEAGHFL++YLLGCPV+  +L      +    G+AGT+F D+ L  +L    ++ ++IDRY+ ++M GIAAEALE+  A+GG SDE A++ +++ +N P   +R+  QARWA L+A+L++K   +A++ALV ALS+ K +G C+  IE
Sbjct:   94 LVLKRHYSNQVQ-VAEVYDELKKKNCLKAFSVIDSEEKLPEPVRYFVNCVPVIIDLVSFAKSKQIGLDKLVETAK--IPLEALRP-RSQSIFSYQLAGVVFSLSLIFFSHLFHIE-NIIRPIGISLLVGFLCDQIALQGAIFEELYKNLFPIYKKKVLKHEAGHFLVSYLLGCPVRGIVLSAWESLSLGIPGQAGTLFFDRKLESELSTGFLTDATIDRYSIVLMAGIAAEALEYGQAEGGQSDEAALLRVLTCLNPPWSKERVFNQARWAVLQAILIIKKQKKAYDALVHALSSKKPLGDCIAMIE 395          
BLAST of NO19G00700 vs. NCBI_GenBank
Match: XP_002289018.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94454.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 163.7 bits (413), Expect = 2.100e-36
Identity = 142/467 (30.41%), Postives = 217/467 (46.47%), Query Frame = 0
Query:  182 DAF--LTEGKDVLGLIDLLKAHESAI-TISRTQLTSLLDVLS-HTQTFRDNLLDRRARGLLPPNERGSLFLPXXXXXXXXXXFMANPGRAFMYLEEYQQAQLESITYVYSVLKKRGLLKAFACIQEVRGYQENYL-----------PKNVDAEMIETRSEGLPMSALTPGQAQNFWAYGGVALCLLELAICRFYGVDAGAVIPGTIAAFFLDRFVGGGRVFDAFARVLLPRYKERIIRHEAGHFLMAYLLGCPVQDCLLR--PVFNGATFG-------EAGTIFLDKTLFEQLEKSK-ISASSIDRYTTIVMGGIAAEALEFKNAQGGASDEQAIILLMSLMN---------FPVDRISTQARWAALRAVLVLKDNPEAFEALVAALSAGKTVGACVQAIEDAMATTNRPFVPXXXXXXXXXXXR---LPVKEYTDIQKVLMPSLPPSLLDSVADFSSITPSFTKGE 612
            DAF    E  ++  LI  LK++ S+I  ++  QLTS+ D +   T    +N +++RA       E  +L               +N    F  L+  +      +T +Y +L++ G L  F  I         +             K +   ++E +  G+ M  LTP +  N   YGG AL +LE  +  +  ++   ++  T+    LD+ +  G VF+   R++LP  K RI +HEAGHFL AYLLGCPV+  +L          FG        AGT + D  L EQ+   K ++  SIDRY+ IVMGGIAAEA+EF  A GGA DE+A++  +  +N         +  + I  QAR+ A  AVL+LK+    ++ALV AL  G  +G C+ AIE+A       ++P               +P++E   +      SL         D S++ P+ T GE
Sbjct:   84 DAFTKAVESNNLQALISHLKSNPSSIPNLTNAQLTSIFDAIEVATAETDENTVNKRA------IEDATLISATSSSSKG-----SNADVEFRSLDRVR----SQMTQLYQLLREGGQLNVFGAIGRKPPSSSKFATPEGPIYPTMGSKIITPNLLE-QITGMEMINLTP-RPTNLLLYGGAALAVLEGILSLYLHINFNLLVFCTLLLALLDQVLVSGAVFETGLRMVLPEMKTRITKHEAGHFLCAYLLGCPVEGVVLSTWAALQDGRFGGRSTRAVSAGTSYYDLDLSEQISGMKPLTRESIDRYSIIVMGGIAAEAVEFGRADGGAGDEEALVRFLRSLNPRGGNAIKSWSPELIRNQARFGATEAVLLLKEYKPCYDALVDALERGGDLGNCIVAIENAAKKEGLGWLPKPFGMVLDEGEHGKWIPIEESDMMSSTNGNSL-------AMDGSNVDPTSTNGE 526          
BLAST of NO19G00700 vs. NCBI_GenBank
Match: CEL99411.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 161.8 bits (408), Expect = 8.100e-36
Identity = 107/333 (32.13%), Postives = 172/333 (51.65%), Query Frame = 0
Query:  271 LEEYQQAQLESITYVYSVLKKRGLLKAF------ACIQEVRGYQENYLPKNVDAEMIETRSEGLPMSALTPGQAQNFWAYGGVALCLLELAICRFYGVDAGAVIPGTIAAFFLDRFVGGGRVFDAFARVLLPRYKERIIRHEAGHFLMAYLLGCPVQDCLLR--PVF--NGATFGEAGTIFLDKTLFEQLEKSKISASSIDRYTTIVMGGIAAEALEFKNAQGGASDEQAIILLMSLMNFP---VDRISTQARWAALRAVLVLKDNPEAFEALVAALSAGKTVGACVQAIEDAMATTNRPFVPXXXXXXXXXXXRLPVKEYTDIQKVLMPSLP 591
            ++  + AQ   I++++ +L + G LK +       C       + N   +N + E    +     +  LTP  +  FW+  GVA  L ++A+          ++P       +D       + ++ ARV+ P Y+ERI++HEAGHFL+ YLLG P+Q C++    +F       G+ GTIF    + E++ + ++   +IDR + I M GIAAEAL+F NA+GG SDE A+ L +    FP   + R++ QARWA  +AVL+LK+  +A++ LV AL  GK VG CV+AIE  +    R                  ++   D++++  PSLP
Sbjct:   68 IQALESAQ-SDISHLFRILSEAGALKGYGLCGTSGCWPVAGQAETNVELQNANIE----KYTNFTIDKLTPKGSGVFWSVAGVAFALAQIAL--LPPETLNILVPLECGVVLVDSLFFRSVLSESVARVVFPPYQERIVKHEAGHFLIGYLLGAPIQRCIVTVPQLFKEKALVAGQGGTIFFVPEIKEEVMRGQLRRETIDRLSIITMAGIAAEALQFGNAEGGRSDEAALRLFLGRDIFPPWSLPRVTLQARWAVTQAVLLLKEYSQAYDNLVEALRQGKPVGDCVEAIERGLPDGARD----------------AIQRRQDMRQMTAPSLP 377          
BLAST of NO19G00700 vs. NCBI_GenBank
Match: CEM11091.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 157.5 bits (397), Expect = 1.500e-34
Identity = 97/268 (36.19%), Postives = 146/268 (54.48%), Query Frame = 0
Query:  330 MSALTPGQAQNFWAYGGVALCLLELAICRFYGVDAGAVIPGTIAAFFLDRFVGGGRVFDAFARVLLPRYKERIIRHEAGHFLMAYLLGCPVQDCLLR--PVF--NGATFGEAGTIFLDKTLFEQLEKSKISASSIDRYTTIVMGGIAAEALEFKNAQGGASDEQAIILLMSLMNFP---VDRISTQARWAALRAVLVLKDNPEAFEALVAALSAGKTVGACVQAIEDAMATTNRPFVPXXXXXXXXXXXRLPVKEYTDIQKVLMPSLP 591
            +  LTP  +  FW+  GVA  L ++A+          ++P    A  +D       +  + ARV+ P Y+ERI++HEAGHFL+ YLLG P+Q C++    +F       G+ GTIF    + E++ + ++   +IDR + I M GIAAEAL+F NA+GG SDE A+ L +    FP   + R++ QARWA  +AVL+LK+  +A++ LV AL  GK VG CV AIE  +    R                  ++   D++++  PSLP
Sbjct:  150 LDKLTPKGSGVFWSVAGVAFALAQIAL--LPPETLNILVPLECGAVLVDSLFFRSVLSKSVARVVFPPYQERIVKHEAGHFLIGYLLGAPIQRCIVTVPQLFKEKALVAGQGGTIFFVPEIKEKVMRGQLRRETIDRLSIITMAGIAAEALQFGNAEGGRSDEAALRLFLGRDIFPPWSLPRVTLQARWAVTQAVLLLKEYSQAYDNLVEALRQGKPVGDCVDAIERGLPDGARD----------------AIRRRQDMRQMTAPSLP 399          
The following BLAST results are available for this feature:
BLAST of NO19G00700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23573.12.200e-8963.92hypothetical protein Naga_101506g2, partial [Nanno... [more]
EWM23569.11.000e-7560.06stress regulated protein [Nannochloropsis gaditana... [more]
CBJ28498.16.400e-4940.64conserved unknown protein [Ectocarpus siliculosus][more]
XP_005831184.11.400e-4341.85hypothetical protein GUITHDRAFT_87555, partial [Gu... [more]
OSX81269.13.200e-4038.41hypothetical protein BU14_0023s0074 [Porphyra umbi... [more]
EJK47513.17.400e-3736.33hypothetical protein THAOC_33760 [Thalassiosira oc... [more]
XP_005706363.19.600e-3733.88hypothetical protein isoform 2 [Galdieria sulphura... [more]
XP_002289018.12.100e-3630.41predicted protein [Thalassiosira pseudonana CCMP13... [more]
CEL99411.18.100e-3632.13unnamed protein product [Vitrella brassicaformis C... [more]
CEM11091.11.500e-3436.19unnamed protein product [Vitrella brassicaformis C... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR055ncniR055Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004396NSK004396Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G00700.1NO19G00700.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|545225gene_7461Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101506g2gene6882Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G00700.1NO19G00700.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G00700 ID=NO19G00700|Name=NO19G00700|organism=Nannochloropsis oceanica|type=gene|length=3224bp
GGGTATGCACTTGACCGGGGCCTGCGATGATGTCATGTGAAGAAGGCGTG
CGTGAGCTCCGCGCATGTATGCAGAGGCAGGAGTTCTTCCTCCTTGTTCC
TGTCCTCCTCCTCTCCCGCCTCTGACCCCTACAGTGATAGCTCGCCCTGA
ATTGATCGCTTGTGGAGTGTCGGTCAAGAACGTCGAGAATGTGAAGCAGA
AAGTTTACTTCAACCAACGGCTCATCAGCCGCCAATGTGATGACGACCAT
GTTGTACCTGCTCGTGGCCTGACTCGACGAAATTAGAAAGAGCAACTTAC
CACGCCACTCACGCGACCAAGTACCTCTGCTCACACAAACTAATGAATGA
CTCTTCAGCCCCTTAATTAAGTCACCCTTGCCCCTCTTTTGTGCTGCATG
TTTGCAAAGGCAAAAAACGCTGCGAGAACAACACACCTCCCCCCACGCCG
CCCCCCGTCCTGACAGCTTCGATAAAGAAGTGGTAGGCCACCTACACCTT
TTAAATCACACCAAGACACGCGAATACCCATCTCACACTCCTTCTCCATC
CATGCCCACCTACAAGTTGCCACAGTCCACCGCGTCTTGCGCCCTCTGCC
AAGTAAAGCAAAGAACAAGAGGATCAGGACACTGCCCCTTCCAGAGGGTC
CCCTACCCAGCACTTCAAGACTCCTCTTTTCAAATAAAGATGCCTCGCAT
CGTCTCCTCAGTCCTGACTCTCACAGTCTTGGCCGGCGTCACCACCAGCA
CCAGCAATGCGTTCCTCCTGCCCTCCTCATCCCCAGTATTGTTCACTTAC
CGCCCCTGCCTCAGTCGACAGCAGACGCCGTTCGCCTCACATGCTGCAGG
GGCCGCCGCAGGATCACGTCGATTCTCTCTCCCTCTTTCTCCCTCCCTCG
TTTGTCTTCAGGCCTCGCCAATCCCTGAGCCCAAAGAGAGGACAGAGGAG
AAGGAGGAGGAGGAAAATGTTGCCAAGAAGGAAGAGGCCTGCGACAAAAA
GAACAGCAGCAGCAGCAGCAGCAGCAGCATCGGTAGTGAAACTGCCGTAA
CAATCACGAGCAGCAGCAACAACAGCCAGGTGCAACGTGATTTTGATGCC
TTCCTCACGGAAGGCAAGGATGTCCTGGGACTCATTGACTTGCTCAAGGC
CCACGAATCTGCCATCACTATCTCCCGCACGCAGCTCACCTCCTTGCTCG
ACGTCCTCTCCCACACCCAGACCTTCCGCGACAACCTCCTCGATCGACGA
GCCCGTGGACTTCTCCCCCCCAACGAGCGTGGATCCCTCTTCCTTCCAAA
TAACAACAACAAGAACAACAACAACGGTTTCATGGCAAATCCCGGTCGTG
CCTTTATGTATCTGGAGGAATACCAACAAGCCCAACTCGAAAGCATCACC
TACGTCTACTCGGTCTTGAAAAAACGAGGTCTCTTGAAGGCTTTCGCATG
CATACAAGAGGTCCGTGGCTACCAAGAGAACTACCTCCCCAAAAATGTGG
ATGCCGAGATGATCGAAACCCGCTCCGAGGGACTGCCCATGTCAGCGCTC
ACCCCTGGCCAGGCCCAGAACTTTTGGGCGTATGGAGGCGTGGCTTTGTG
TTTGTTGGAGCTCGCAATATGTCGATTTTATGGGGTGGATGCCGGGGCGG
TGATTCCGGGTACGATTGCGGCGTTTTTCTTGGATCGTTTCGTGGGGGGG
GGACGCGTGTTTGATGCCTTTGCTCGGGTGTTGTTGCCGAGGTACAAGGA
AAGGATTATCAGGCACGAGGCGGGGCACTTCTTGATGGCGTATTTATTGG
GGTGTCCAGTGCAGGATTGTTTATTGCGGCCGGTGTTCAATGgtgagtgt
cataccatatgggagggggatttaattattcagtgtttcttttacatctt
ttttgaatattaatgatttttttacgtcagccttgcatttcccaaatgcc
tatcgattaagagaggcagcgtgtaatacattaactaacctttgcctctt
cccctccgtctcctcttccctccctccctccttttcccccttccaaacag
GCGCCACATTCGGGGAAGCTGGCACCATTTTCCTGGACAAGACCCTCTTC
GAGCAACTAGAGAAAAGCAAAATCTCGGCTTCGTCCATCGACCGCTACAC
CACCATCGTCATGGGCGGGATCGCAGCAGAGGCGCTCGAGTTCAAAAATG
CGCAAGGGGGGGCCAGTGACGAACAAGCCATCATTCTCTTAATGAGTTTG
ATGAATTTTCCCGTGGACCGGATCTCGACGCAAGCCCGCTGGGCCGCCTT
GCGCGCCGTGTTGGTGCTGAAAGACAACCCGGAGGCCTTCGAGGCCCTCG
TAGCTGCGCTCTCTGCTGGGAAGACCGTGGGCGCCTGCGTCCAAGCCATA
GAGGATGCCATGGCCACCACCAACCGCCCTTTCGTCCCTCCCGCTGCGGT
CGGCCCTCCTCCTCCTCCTCCCCGTCTCCCTGTCAAGGAATACACGGACA
TCCAAAAGGTACTCATGCCCTCCCTCCCTCCCTCCCTTCTGGACTCCGTG
GCCGATTTCTCCTCTATCACGCCCTCCTTCACCAAGGGAGAAGACGTCAT
CCCGAAAATGGAGGCCAAGGAAAAACGGTTTGCCGACGCGGCAGAACAGA
AGTTAAAATCAAGGCAGAGGGAGGTGAACATAAGACTTCAGCAAGTCACT
GCCAGATTAGAAGGGAAGACCCCGGAGGAGGTGTTGGAGATCGGGAATAG
GACCGGCACAGGGGAGGGAGGGAGGGAGGGAGGGGCGGGGAGTGGAGAGA
TGGTGAGTGACGAGGACGAGGAGAAGCAGATCGAGCAGCAACTTAATGCA
TTGGACCAGCGCTTAAAGGAGCTGAATGAAAAATTGGGGAATGGCGGGGC
AGGAAGGGGTGTAAGGAGGGGACGTCAGAAGTAGATAACAATAGATGATA
GTGGACGTGTTCGATTTATTTGATTTTGGGGCATTGTACAGGTAGGGGAA
AAAGAAGAAGCCGAGGAAAAGAAAGATGACGAGAGGCAGCAACTGTAGCA
CCGGCAGTTGTAATAGCAGCTCCGGCAGCTAAGGGAACTGAACAAAGCAT
TGGTAGGTAGGGAGAAAGCGAAGCCACATAAAAAAAAAGAGAGAATGTAT
CCGAAGAAAGAGAAGCAATCAAGGGATAAATAAACTTTTTGGACGAAGGA
CAAATTGAAGCCCAAGGAAACGTG
back to top

protein sequence of NO19G00700.1

>NO19G00700.1-protein ID=NO19G00700.1-protein|Name=NO19G00700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=725bp
MPTYKLPQSTASCALCQVKQRTRGSGHCPFQRVPYPALQDSSFQIKMPRI
VSSVLTLTVLAGVTTSTSNAFLLPSSSPVLFTYRPCLSRQQTPFASHAAG
AAAGSRRFSLPLSPSLVCLQASPIPEPKERTEEKEEEENVAKKEEACDKK
NSSSSSSSSIGSETAVTITSSSNNSQVQRDFDAFLTEGKDVLGLIDLLKA
HESAITISRTQLTSLLDVLSHTQTFRDNLLDRRARGLLPPNERGSLFLPN
NNNKNNNNGFMANPGRAFMYLEEYQQAQLESITYVYSVLKKRGLLKAFAC
IQEVRGYQENYLPKNVDAEMIETRSEGLPMSALTPGQAQNFWAYGGVALC
LLELAICRFYGVDAGAVIPGTIAAFFLDRFVGGGRVFDAFARVLLPRYKE
RIIRHEAGHFLMAYLLGCPVQDCLLRPVFNGATFGEAGTIFLDKTLFEQL
EKSKISASSIDRYTTIVMGGIAAEALEFKNAQGGASDEQAIILLMSLMNF
PVDRISTQARWAALRAVLVLKDNPEAFEALVAALSAGKTVGACVQAIEDA
MATTNRPFVPPAAVGPPPPPPRLPVKEYTDIQKVLMPSLPPSLLDSVADF
SSITPSFTKGEDVIPKMEAKEKRFADAAEQKLKSRQREVNIRLQQVTARL
EGKTPEEVLEIGNRTGTGEGGREGGAGSGEMVSDEDEEKQIEQQLNALDQ
RLKELNEKLGNGGAGRGVRRGRQK*
back to top
Synonyms
Publications