NO19G00660, NO19G00660 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00660 vs. NCBI_GenBank
Match: EWM23571.1 (60s ribosomal protein l21-a [Nannochloropsis gaditana]) HSP 1 Score: 290.8 bits (743), Expect = 2.600e-75 Identity = 147/161 (91.30%), Postives = 155/161 (96.27%), Query Frame = 0 Query: 1 MPHSFGYRARTRSMFRRAFGEHGVNPLSIYMRNYKVGDVVDIKANSSIQKGMPFKGYHGRTGVVYNVTKRALGVEVNKLVNGKIIKKKINIRVEHLRPTTSRKEWIERVRQNELQKKALKAGEKEFRQLKRLPKAPKEAFMLKYEEKEVQTIQAIPFVDLV 162 MPHS+GYRARTRSMFRR FGEHGVNPLSIYMRNYKVGDVVDIKAN SIQKGMPFKGYHGRTGVVYNVTKRALGVEVNKLVNGKIIKKKIN+RVEHLRP+TSRKEWIERVRQNELQKKA+KAGEKE+R+LKRLPKAPKEAF KY + EVQT+QAIPFVDLV Sbjct: 1 MPHSYGYRARTRSMFRRDFGEHGVNPLSIYMRNYKVGDVVDIKANPSIQKGMPFKGYHGRTGVVYNVTKRALGVEVNKLVNGKIIKKKINVRVEHLRPSTSRKEWIERVRQNELQKKAVKAGEKEYRELKRLPKAPKEAFTFKY-DGEVQTVQAIPFVDLV 160
BLAST of NO19G00660 vs. NCBI_GenBank
Match: EIE75305.1 (60S ribosomal protein L21-A [Rhizopus delemar RA 99-880] >EIE83577.1 60S ribosomal protein L21-A [Rhizopus delemar RA 99-880] >EIE90344.1 60S ribosomal protein L21-A [Rhizopus delemar RA 99-880]) HSP 1 Score: 172.6 bits (436), Expect = 1.000e-39 Identity = 87/161 (54.04%), Postives = 118/161 (73.29%), Query Frame = 0 Query: 1 MPHSFGYRARTRSMFRRAFGEHGVNPLSIYMRNYKVGDVVDIKANSSIQKGMPFKGYHGRTGVVYNVTKRALGVEVNKLVNGKIIKKKINIRVEHLRPTTSRKEWIERVRQNELQKKALKAGEKEFRQLKRLPKAPKEAFMLKYEEKEVQTIQAIPFVDLV 162 MPHSFG RARTR MF R F EHGV PLS Y++ YKVGD+VDIKAN+++QKGMP K YHGRTG++YNVTK ++GV V+K+V + I+K++N+RVEH+R + R+E+++RV+ N +KK KA F LKRLP P++A + + QTI IP+ L+ Sbjct: 1 MPHSFGLRARTRHMFSRNFREHGVIPLSTYLKTYKVGDIVDIKANAAVQKGMPHKFYHGRTGIIYNVTKSSVGVIVHKVVGNRYIEKRVNVRVEHIRHSKCRQEFLDRVKSNAQKKKEAKAAGVTF-NLKRLPAQPRDARHVSTKNNVPQTIAPIPYETLI 160
BLAST of NO19G00660 vs. NCBI_GenBank
Match: EIE83454.1 (60S ribosomal protein L21-A [Rhizopus delemar RA 99-880]) HSP 1 Score: 171.8 bits (434), Expect = 1.800e-39 Identity = 87/161 (54.04%), Postives = 118/161 (73.29%), Query Frame = 0 Query: 1 MPHSFGYRARTRSMFRRAFGEHGVNPLSIYMRNYKVGDVVDIKANSSIQKGMPFKGYHGRTGVVYNVTKRALGVEVNKLVNGKIIKKKINIRVEHLRPTTSRKEWIERVRQNELQKKALKAGEKEFRQLKRLPKAPKEAFMLKYEEKEVQTIQAIPFVDLV 162 MPHSFG RARTR MF R F EHGV PLS Y++ YKVGD+VDIKAN+++QKGMP K YHGRTG++YNVTK ++GV V+K+V + I+K++N+RVEH+R + R+E+++RV+ N +KK KA F LKRLP P++A + + QTI IP+ L+ Sbjct: 1 MPHSFGLRARTRHMFSRNFREHGVIPLSTYLKTYKVGDIVDIKANAAVQKGMPHKFYHGRTGIIYNVTKSSVGVIVHKVVGNRYIEKRVNVRVEHIRHSKCRQEFLDRVKLNAQKKKEAKAAGVTF-NLKRLPAQPRDARHVSTKNNVPQTIAPIPYETLI 160
BLAST of NO19G00660 vs. NCBI_GenBank
Match: XP_008903366.1 (hypothetical protein PPTG_10422 [Phytophthora parasitica INRA-310] >ETI50707.1 hypothetical protein F443_05836 [Phytophthora parasitica P1569] >ETK90528.1 hypothetical protein L915_05703 [Phytophthora parasitica] >ETL97138.1 hypothetical protein L917_05526 [Phytophthora parasitica] >ETM50294.1 hypothetical protein L914_05643 [Phytophthora parasitica] >ETN11584.1 hypothetical protein PPTG_10422 [Phytophthora parasitica INRA-310] >ETO79384.1 hypothetical protein F444_05884 [Phytophthora parasitica P1976] >ETP48373.1 hypothetical protein F442_05879 [Phytophthora parasitica P10297] >KUF78036.1 60S ribosomal protein L21-1 [Phytophthora nicotianae] >KUF98288.1 Dicarboxylate/Amino Acid:Cation (Na or H) Symporter (DAACS) family [Phytophthora nicotianae]) HSP 1 Score: 170.2 bits (430), Expect = 5.100e-39 Identity = 90/161 (55.90%), Postives = 116/161 (72.05%), Query Frame = 0 Query: 1 MPHSFGYRARTRSMFRRAFGEHGVNPLSIYMRNYKVGDVVDIKANSSIQKGMPFKGYHGRTGVVYNVTKRALGVEVNKLVNGKIIKKKINIRVEHLRPTTSRKEWIERVRQNELQKKALKAGEKEFRQLKRLPKAPKEAFMLKYEEKEVQTIQAIPFVDLV 162 MPHSFGYRARTR MF R F + G+ +S Y+R +KVGD VDIKAN ++QKGMP K YHGRTG VYNVTKRA+GV VNK+V +II K IN+R+EH+ + R ++ RV++NEL+KK +A Q+KR P PKEA+ LK + + T+ A PFVDL+ Sbjct: 1 MPHSFGYRARTRDMFARPFRQSGMIKMSTYLRTFKVGDYVDIKANGAVQKGMPHKFYHGRTGRVYNVTKRAVGVRVNKIVGNRIIHKHINVRIEHVHQSKCRLGFLTRVKENELKKKEARATGVR-AQIKRTPVQPKEAYTLKTKGTKPITMAAQPFVDLM 160
BLAST of NO19G00660 vs. NCBI_GenBank
Match: ORZ01215.1 (60S ribosomal protein L21-A [Syncephalastrum racemosum]) HSP 1 Score: 170.2 bits (430), Expect = 5.100e-39 Identity = 91/162 (56.17%), Postives = 117/162 (72.22%), Query Frame = 0 Query: 1 MPHSFGYRARTRSMFRRAFGEHGVNPLSIYMRNYKVGDVVDIKANSSIQKGMPFKGYHGRTGVVYNVTKRALGVEVNKLVNGKIIKKKINIRVEHLRPTTSRKEWIERVRQNELQKKALKA-GEKEFRQLKRLPKAPKEAFMLKYEEKEVQTIQAIPFVDLV 162 MPHSFG RARTR MF R F EHG LS Y+ YKVGD+VDIKAN+SIQ GMP K YHGRTGVVYNVTK A+GV +NK V + I+K++N+R+EH++ + R+E+++RV+ N +KK KA GEK LKR+P P+EA + E+ QTIQ IP+ L+ Sbjct: 1 MPHSFGLRARTRHMFSRKFREHGPTHLSTYLTTYKVGDIVDIKANASIQAGMPHKFYHGRTGVVYNVTKTAVGVLINKRVGNRYIEKRVNVRIEHVKHSKCRQEFLDRVKANAEKKKQAKASGEKV--NLKRIPVQPREARFVSTEDNVPQTIQPIPYETLL 160
BLAST of NO19G00660 vs. NCBI_GenBank
Match: EMD42347.1 (hypothetical protein CERSUDRAFT_110856 [Gelatoporia subvermispora B]) HSP 1 Score: 169.1 bits (427), Expect = 1.100e-38 Identity = 83/158 (52.53%), Postives = 121/158 (76.58%), Query Frame = 0 Query: 1 MPHSFGYRARTRSMFRRAFGEHGVNPLSIYMRNYKVGDVVDIKANSSIQKGMPFKGYHGRTGVVYNVTKRALGVEVNKLVNGKIIKKKINIRVEHLRPTTSRKEWIERVRQNE-LQKKALKAGEKEFRQLKRLPKAPKEAFMLKYEEKEVQTIQAIPF 158 MPHSFGYRARTR MF+R F EHG+ LS Y+ Y+VGD+VDIKANS++Q+GMP K YHGRTG++YNVT RA+GV VNK+V G+ I+K++N+R+EH+R + R+E+++RV++N +A + GE+ LKR+P P+EA ++ + E QT++ +P+ Sbjct: 1 MPHSFGYRARTRDMFKRGFKEHGLIRLSTYLIPYRVGDIVDIKANSAMQRGMPHKFYHGRTGIIYNVTPRAVGVIVNKVVGGRYIEKRVNVRIEHIRHSKCRQEFLDRVKRNHAAHVEAKQKGERVV--LKRIPVLPREAHVVSTQGNEPQTMRPVPY 156
BLAST of NO19G00660 vs. NCBI_GenBank
Match: ETL43938.1 (hypothetical protein L916_05640 [Phytophthora parasitica] >ETP20482.1 hypothetical protein F441_05841 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 169.1 bits (427), Expect = 1.100e-38 Identity = 89/161 (55.28%), Postives = 116/161 (72.05%), Query Frame = 0 Query: 1 MPHSFGYRARTRSMFRRAFGEHGVNPLSIYMRNYKVGDVVDIKANSSIQKGMPFKGYHGRTGVVYNVTKRALGVEVNKLVNGKIIKKKINIRVEHLRPTTSRKEWIERVRQNELQKKALKAGEKEFRQLKRLPKAPKEAFMLKYEEKEVQTIQAIPFVDLV 162 MPHSFGYRARTR MF R F + G+ +S Y+R +KVGD VDIKAN ++QKGMP K YHGRTG VYNVTKRA+GV VNK+V +II K IN+R+EH+ + R ++ RV++NEL+KK +A Q+KR P PK+A+ LK + + T+ A PFVDL+ Sbjct: 1 MPHSFGYRARTRDMFARPFRQSGMIKMSTYLRTFKVGDYVDIKANGAVQKGMPHKFYHGRTGRVYNVTKRAVGVRVNKIVGNRIIHKHINVRIEHVHQSKCRLGFLTRVKENELKKKEARATGVR-AQIKRTPVQPKDAYTLKTKGTKPITMAAQPFVDLM 160
BLAST of NO19G00660 vs. NCBI_GenBank
Match: CDS14249.1 (Putative 60S ribosomal protein L21-A [Lichtheimia ramosa] >CDS04035.1 Putative 60S ribosomal protein L21-A [Lichtheimia ramosa] >CDS05827.1 Putative 60S ribosomal protein L21-A [Lichtheimia ramosa]) HSP 1 Score: 168.7 bits (426), Expect = 1.500e-38 Identity = 89/162 (54.94%), Postives = 118/162 (72.84%), Query Frame = 0 Query: 1 MPHSFGYRARTRSMFRRAFGEHGVNPLSIYMRNYKVGDVVDIKANSSIQKGMPFKGYHGRTGVVYNVTKRALGVEVNKLVNGKIIKKKINIRVEHLRPTTSRKEWIERVRQNELQKKALK-AGEKEFRQLKRLPKAPKEAFMLKYEEKEVQTIQAIPFVDLV 162 MPHSFG RARTR MF R F EHG PLS Y++ YKVGD+VDIKAN+++QKGMP K YHGRTGVVYNVTK A+GV V+K V + ++K++NIR+EH++ + R+E++ERV++N +KKA K G K LKRLP P+EA + + QTI +P+ L+ Sbjct: 1 MPHSFGLRARTRHMFSRKFREHGAIPLSTYLKTYKVGDIVDIKANAAVQKGMPHKFYHGRTGVVYNVTKSAVGVIVHKRVGNRYMEKRVNIRIEHVKHSKCRQEFLERVKENAQKKKAAKETGVKV--NLKRLPAQPREARHVSTKHNVPQTIAPVPYETLL 160
BLAST of NO19G00660 vs. NCBI_GenBank
Match: ORY93809.1 (60S ribosomal protein L21-A [Syncephalastrum racemosum]) HSP 1 Score: 168.3 bits (425), Expect = 1.900e-38 Identity = 90/162 (55.56%), Postives = 116/162 (71.60%), Query Frame = 0 Query: 1 MPHSFGYRARTRSMFRRAFGEHGVNPLSIYMRNYKVGDVVDIKANSSIQKGMPFKGYHGRTGVVYNVTKRALGVEVNKLVNGKIIKKKINIRVEHLRPTTSRKEWIERVRQNELQKKALKA-GEKEFRQLKRLPKAPKEAFMLKYEEKEVQTIQAIPFVDLV 162 MPHSFG RARTR MF R F EHG LS Y+ YKVGD+VDIKAN+SIQ GMP K YHGRTGVVYNVTK A+GV +NK V + I+K++N+R+EH++ + R+E+++RV+ N +KK KA GEK LKR+P P++A + E QTIQ IP+ L+ Sbjct: 1 MPHSFGLRARTRHMFSRKFREHGPTHLSTYLTTYKVGDIVDIKANASIQAGMPHKFYHGRTGVVYNVTKTAVGVLINKRVGNRYIEKRVNVRIEHVKHSKCRQEFLDRVKANAEKKKQAKASGEKV--NLKRIPVQPRDARFVSTENNVPQTIQPIPYETLL 160
BLAST of NO19G00660 vs. NCBI_GenBank
Match: POM59503.1 (hypothetical protein PHPALM_31761 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 168.3 bits (425), Expect = 1.900e-38 Identity = 89/161 (55.28%), Postives = 115/161 (71.43%), Query Frame = 0 Query: 1 MPHSFGYRARTRSMFRRAFGEHGVNPLSIYMRNYKVGDVVDIKANSSIQKGMPFKGYHGRTGVVYNVTKRALGVEVNKLVNGKIIKKKINIRVEHLRPTTSRKEWIERVRQNELQKKALKAGEKEFRQLKRLPKAPKEAFMLKYEEKEVQTIQAIPFVDLV 162 MPHSFGYRARTR MF R F + G+ +S Y+R +KVGD VDIKAN ++QKGMP K YHGRTG VYNVTKRA+GV VNK+V +II K IN+R+EH+ + R ++ RV++NEL+KK +A Q+KR P PK A+ LK + + T+ A PFVDL+ Sbjct: 1 MPHSFGYRARTRDMFARPFRQSGMIKMSTYLRTFKVGDYVDIKANGAVQKGMPHKFYHGRTGRVYNVTKRAVGVRVNKVVGNRIIHKHINVRIEHVHQSKCRLGFLTRVKENELKKKEARATGVR-AQIKRTPVQPKAAYTLKAKGTKPITMAAQPFVDLI 160 The following BLAST results are available for this feature:
BLAST of NO19G00660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00660 ID=NO19G00660|Name=NO19G00660|organism=Nannochloropsis oceanica|type=gene|length=1995bpback to top protein sequence of NO19G00660.1 >NO19G00660.1-protein ID=NO19G00660.1-protein|Name=NO19G00660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=162bpback to top Synonyms
Publications
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