NO19G00460, NO19G00460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00460 vs. NCBI_GenBank
Match: EWM23547.1 (expressed unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 152.9 bits (385), Expect = 1.600e-33 Identity = 91/182 (50.00%), Postives = 110/182 (60.44%), Query Frame = 0 Query: 1 MTRQRRRD--ASPS-SPSSILLPSFLCLGLLINATQAFHLYLRP--HTTSYFSPPTSRRPSXXXXXXXXXXXXXXXXXXXXSLRLAASDTIEAPPQSDAEGTVTVRFVNTPEGSDVVALAQEGENLMKVGDRVGLKIPRACCTGLCGTCTSDLKDPTYNMRGDSKPSSAREGYQTIRACSTQ 178 M R RRR+ SPS PSS L L L L + ++AF LY RP H TS+ R+P AS T A P + T+ VRF+NTP+G+DVV AQEG+NLMKVGD+ G+ IPRACCTGLCGTCTSDL+DP+Y +G+ KP+ AREGYQTIRACSTQ Sbjct: 1 MARHRRREDRGSPSIFPSSSAL--LLFLSCLCDNSRAFCLYQRPAHHFTSFLL--HGRQP-----FSSFPLASSFSPSASLPTSSLASSTSPAEPLDNVRETIQVRFINTPDGNDVVTTAQEGDNLMKVGDKAGISIPRACCTGLCGTCTSDLRDPSYTFKGEDKPAGAREGYQTIRACSTQ 173
BLAST of NO19G00460 vs. NCBI_GenBank
Match: EWM23548.1 (Heat shock protein DnaJ, cysteine-rich domain protein [Nannochloropsis gaditana]) HSP 1 Score: 132.1 bits (331), Expect = 2.900e-27 Identity = 65/90 (72.22%), Postives = 70/90 (77.78%), Query Frame = 0 Query: 187 MVIDVYRIKKKKGAKGGSEQAENPMERFSGDWETNFRQGSKWSVPSTSTSGMALRQAKPDEGGACTTCGGTGKIPCFNCKGKGVLTSGQR 277 MV+DVYRIKKKKGAK G E+ N M+RFSGDWET F+QGSKWSVP T GMALRQ+KPD G C TC G GK PCFN GKGVL SGQR Sbjct: 1 MVVDVYRIKKKKGAK-GQEEDGNYMQRFSGDWETTFKQGSKWSVPDTKAGGMALRQSKPDGGAVCPTCKGGGKNPCFNXXGKGVLVSGQR 89
BLAST of NO19G00460 vs. NCBI_GenBank
Match: OSX70920.1 (hypothetical protein BU14_0634s0006 [Porphyra umbilicalis]) HSP 1 Score: 127.1 bits (318), Expect = 9.400e-26 Identity = 75/191 (39.27%), Postives = 104/191 (54.45%), Query Frame = 0 Query: 87 EAPPQSDAE-----GTVTVRFVNTPEGSDVVALAQEGENLMKVGDRVGLKIPRACCTGLCGTCTSDLKDPTYNMRGD---SKPSSAREGYQTIRACSTQVKLPPGCEEMVIDVYRIKKKKGAKGGSEQAENPMERFSGDWETNFRQGSKWSVPSTSTSGMALRQAKPDEGGACTTCGGTGKIPCFNCKGKG 270 EA P + ++ G V VRF+NTP G DV+A+A GE L+ VGD VGL IPR+C +GLCG+CT +L+DP++ D R G+QTIRACST+V L GC EMV+DV R++ + +P RF G +T + +G A + A +C C G G+ C+ C+G G Sbjct: 106 EAAPSATSDFDLGPGQVAVRFINTPTGEDVLAVANPGERLLSVGDGVGLTIPRSCVSGLCGSCTCELQDPSWVPEDDXXXXXXXXGRPGWQTIRACSTEVMLLDGCTEMVVDVVRMRTT------GRRERDPFSRFDG-LDTGYE------------AGAAPKVAGIRRDVSCAHCAGVGRHTCYACEGTG 277
BLAST of NO19G00460 vs. NCBI_GenBank
Match: XP_005708767.1 (hypothetical protein Gasu_06560 [Galdieria sulphuraria] >EME32247.1 hypothetical protein Gasu_06560 [Galdieria sulphuraria]) HSP 1 Score: 108.6 bits (270), Expect = 3.400e-20 Identity = 63/175 (36.00%), Postives = 83/175 (47.43%), Query Frame = 0 Query: 96 GTVTVRFVNTPEGSDVVALAQEGENLMKVGDRVGLKIPRACCTGLCGTCTSDLKDPTYNMRGDSKPSSAREGYQTIRACSTQVKLPPGCEEMVIDVYRIKKKKGAKGGSEQAENPMERFSGDWETNFRQGSKWSVPSTSTSGMALRQAKPDEGGACTTCGGTGKIPCFNCKGKGV 271 G + VRF+NTP G D+V A+ ENLM V D VGLKIPR C TG+CGTCT++L+D S+ +G IR C T V LP GC+EMV+DV+ + +E+ + + D CTTC G G + CF C G G+ Sbjct: 102 GEIAVRFINTPTGEDIVVAAKPSENLMDVADSVGLKIPRYCETGVCGTCTAELED-----------LSSVDGRVAIRPCCTDVHLPTGCDEMVVDVFHCRNFSSVVDYTEEVLQSDRKLTRD---------------------------------CTTCLGQGIVSCFPCGGSGL 232
BLAST of NO19G00460 vs. NCBI_GenBank
Match: XP_005841458.1 (hypothetical protein GUITHDRAFT_160680, partial [Guillardia theta CCMP2712] >EKX54478.1 hypothetical protein GUITHDRAFT_160680, partial [Guillardia theta CCMP2712]) HSP 1 Score: 96.3 bits (238), Expect = 1.800e-16 Identity = 57/164 (34.76%), Postives = 82/164 (50.00%), Query Frame = 0 Query: 111 VVALAQEGENLMKVGDRVGLKIPRACCTGLCGTCTSDLKDPTYNMRGDSKPSSAREGYQTIRACSTQVKLPPGCEEMVIDVYRIKKKKGAKGGSEQAENPMERFSGDWETNFRQGSKWSVPSTSTSGMALRQAKPDEGGACTTCGGTGKIPCFNCKGKGVLTSG 275 V+A A G+ L+ VGD VG+ +PR C TGLCG+CT D++DP++ P S RAC T+V LP GC+E+V+DVYR+ S+ ++PM RFS + ++W++P G GK+ C C KGV + G Sbjct: 77 VIAAANPGDVLLAVGDSVGISLPRGCQTGLCGSCTCDIEDPSF-------PGSR----SVARACCTKVSLPEGCDELVVDVYRL-----LSSSSKPKKDPMARFSSLDDPKVGFKARWNLPRD---------------------GPEGKVDCPACGAKGVSSKG 203
BLAST of NO19G00460 vs. NCBI_GenBank
Match: XP_005537301.1 (hypothetical protein CYME_CMN164C [Cyanidioschyzon merolae strain 10D] >BAM81265.1 hypothetical protein CYME_CMN164C [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 88.2 bits (217), Expect = 4.800e-14 Identity = 59/167 (35.33%), Postives = 84/167 (50.30%), Query Frame = 0 Query: 94 AEGTVTVRFVNTPEGSDVVALAQEGENLMKVGDRVGLKIPRACCTGLCGTCTSDLKDPTYNMRGDSKPSSAREGYQTIRACSTQVKLPPGCEEMVIDVYRIKKKKGAKGGSEQAENPMERFSG-DWETNFRQGSKWSVPSTSTSGMALRQAKPDEGGACTTCGGTGK 260 A V VRF+NTP G ++ +A G ++ V D +GL+IPR C +G+CG CT D+ P S G QT+R CST+V PG +E+VIDVYR+K+ + RF D+E ++ G++ + A A+P C C GTGK Sbjct: 121 AASLVKVRFINTPGGLELETMAPPGSIVLAVADELGLRIPRGCTSGVCGACTCDMVHP-----------SLPGGRQTVRVCSTKVATFPGIDEIVIDVYRMKESATRDAYQSSTLRALNRFDNIDFE--YKAGAQ----PRAIMNPANPFARP-RTVRCEKCKGTGK 269
BLAST of NO19G00460 vs. NCBI_GenBank
Match: CBN79703.1 (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 75.9 bits (185), Expect = 2.500e-10 Identity = 52/144 (36.11%), Postives = 71/144 (49.31%), Query Frame = 0 Query: 95 EGTVTVRFVNTPEGSDVVALAQEGENLMKVGDRVGLKIPRACCTGLCGTCTSDLKDPTYNMRGDSKPSSAREGYQTIRACSTQVKLPPGCEEMVIDVY--RIK-------------KKKGAKGGSEQAENPMERFSGDWETNFR 224 +G V VRF+NT DV A GE + KV R G+KI AC +G+CGTC +DL+ D+ S R G+Q +RAC T PG +D+Y R K K+KG K +E + M+RF WE ++ Sbjct: 36 KGQVGVRFINTSGDPDVCTAAYPGEIVTKVAKRCGVKIATACNSGICGTCMTDLE--------DANGKSYRPGFQVVRACVT-----PG-----LDIYPNRAKSGKLNNRLAGSKGKRKGEKMEAETVVDAMKRFEEGWEDEYQ 161 The following BLAST results are available for this feature:
BLAST of NO19G00460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00460 ID=NO19G00460|Name=NO19G00460|organism=Nannochloropsis oceanica|type=gene|length=2617bpback to top protein sequence of NO19G00460.1 >NO19G00460.1-protein ID=NO19G00460.1-protein|Name=NO19G00460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=306bpback to top Synonyms
Publications
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