NO19G00380, NO19G00380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00380 vs. NCBI_GenBank
Match: CBN79553.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 241.9 bits (616), Expect = 4.500e-60 Identity = 128/287 (44.60%), Postives = 165/287 (57.49%), Query Frame = 0 Query: 181 VVFVRHGQSDFNRQEIFTGWCDVDVNKKGEDECKEAGMLLASRGFTFDIAYTSVLKRAVKSLWCCLDGCDHTFIPIKMHWRLNERHYGAMQGLSKEESEKKLGPIVKLWRRSWRGKPPDMPPSHPHYPLIRGDRRYKDVADSVLPKGESLEMCAERVMVYWEEEVLPSIRRGERPLVVAHANSLRSLIKRLDGLGEEQVEKGRQEGGRKGGKEQSIEVIEDVKIPNGRPFVYWFDEEGVVVDREGRRGGEGRFRGVFIREEGEKEGGDLREGGXXXXXXXGHRKWRE 468 VV +RHG S FN+ IFTGWCDV + ++G E EAG LLA+ GF FD+A+ SVLKRA SL LDGC ++P+K WRLNERHYGA+QG +K E+ +G +V WRR + +PP M +HPH+PLI D RY+ + +P+ ESL A RVM YWE +V+P IR G+R +VVAHAN+LRSL+KRLD + E + I +V IP G PFVY FD + + G GRF G + E+ D H KW E Sbjct: 23 VVLLRHGMSTFNKLNIFTGWCDVPLTEEGRQEALEAGKLLAAAGFRFDVAHASVLKRACTSLHRLLDGCGQPYVPVKTSWRLNERHYGALQGRNKATLEEAMGEVVVEWRRGYGVRPPPMTDTHPHWPLISLDSRYRGLK---VPQSESLRDTANRVMEYWESDVVPDIRAGKRVIVVAHANTLRSLVKRLDDVEE--------------------DAIRNVNIPTGEPFVYDFDADLKPIGEPDEHGFRGRFVGDLMAEK------DAAVNEYKRREEACHTKWEE 280
BLAST of NO19G00380 vs. NCBI_GenBank
Match: WP_070989309.1 (2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Halofilum ochraceum]) HSP 1 Score: 221.9 bits (564), Expect = 4.800e-54 Identity = 110/244 (45.08%), Postives = 147/244 (60.25%), Query Frame = 0 Query: 181 VVFVRHGQSDFNRQEIFTGWCDVDVNKKGEDECKEAGMLLASRGFTFDIAYTSVLKRAVKSLWCCLDGCDHTFIPIKMHWRLNERHYGAMQGLSKEESEKKLG-PIVKLWRRSWRGKPPDMPPSHPHYPLIRGDRRYKDVADSVLPKGESLEMCAERVMVYWEEEVLPSIRRGERPLVVAHANSLRSLIKRLDGLGEEQVEKGRQEGGRKGGKEQSIEVIEDVKIPNGRPFVYWFDEEGVVVDR 424 VV +RHG+S++NR+ FTGW DVD+ G DE ++ L GF FD YTS+LKRA+++LW LD D ++P++ HWRLNERHYGA+QGL+K E+ K G V WRRS+ +PP++ P P DRRY+D+A +P E L ER M YWE+E+ P IR G+R LVVAH NSLR+L+K L+G+G+E+ I V IP G P VY D + +DR Sbjct: 4 VVLLRHGESEWNRENRFTGWADVDLTDTGRDEARQGAEALREEGFDFDRCYTSLLKRAIRTLWITLDELDRMWLPVQRHWRLNERHYGALQGLNKAETAAKYGDDQVHTWRRSYATRPPELEPDDERNP--AHDRRYRDLASDEIPLTECLADTVERFMPYWEQEIAPVIRSGKRVLVVAHGNSLRALVKHLEGMGDEE--------------------ITGVNIPTGMPLVYTLDADLRPIDR 225
BLAST of NO19G00380 vs. NCBI_GenBank
Match: WP_014561768.1 (2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Ignavibacterium album] >AFH50629.1 Phosphoglycerate mutase 1 [Ignavibacterium album JCM 16511]) HSP 1 Score: 219.9 bits (559), Expect = 1.800e-53 Identity = 110/237 (46.41%), Postives = 153/237 (64.56%), Query Frame = 0 Query: 181 VVFVRHGQSDFNRQEIFTGWCDVDVNKKGEDECKEAGMLLASRGFTFDIAYTSVLKRAVKSLWCCLDGCDHTFIPIKMHWRLNERHYGAMQGLSKEESEKKLG-PIVKLWRRSWRGKPPDMPPSHPHYPLIRGDRRYKDVADSVLPKGESLEMCAERVMVYWEEEVLPSIRRGERPLVVAHANSLRSLIKRLDGLGEEQVEKGRQEGGRKGGKEQSIEVIEDVKIPNGRPFVYWFDE 417 VV +RHG+S +N++ FTGW DVD+++KG++E K+AG +L S G+TFDIAYTSVLKRA+++LW LD D +IP+ HWRLNERHYGA+QGL+K E+ KK G VK+WRRS+ +PP + S P YP D RYKD+++S LP E L+ R + YWE + P ++ G++ L+ AH NSLR+L+K LD + + + I ++ IP G P VY DE Sbjct: 4 VVLLRHGESIWNKENRFTGWTDVDLSEKGKEEAKKAGEVLKSEGYTFDIAYTSVLKRAIRTLWIVLDEMDLMWIPVIRHWRLNERHYGALQGLNKAETAKKYGEEQVKIWRRSYDIQPPALEKSDPRYP--GHDPRYKDLSESELPLTECLKDTVARFVPYWEGTIAPMVKSGKKVLITAHGNSLRALVKYLDNIPDNE--------------------IVELNIPTGIPLVYELDE 218
BLAST of NO19G00380 vs. NCBI_GenBank
Match: WP_013317038.1 (2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Dickeya dadantii] >ADM97577.1 phosphoglyceromutase 1 [Dickeya dadantii 3937] >OOC13775.1 phosphoglyceromutase [Dickeya dadantii]) HSP 1 Score: 218.4 bits (555), Expect = 5.300e-53 Identity = 108/237 (45.57%), Postives = 149/237 (62.87%), Query Frame = 0 Query: 181 VVFVRHGQSDFNRQEIFTGWCDVDVNKKGEDECKEAGMLLASRGFTFDIAYTSVLKRAVKSLWCCLDGCDHTFIPIKMHWRLNERHYGAMQGLSKEESEKKLG-PIVKLWRRSWRGKPPDMPPSHPHYPLIRGDRRYKDVADSVLPKGESLEMCAERVMVYWEEEVLPSIRRGERPLVVAHANSLRSLIKRLDGLGEEQVEKGRQEGGRKGGKEQSIEVIEDVKIPNGRPFVYWFDE 417 +V VRHG+S +N + FTGW DVD+++KG +E K+AG LL GF+FD AYTSVLKRA+ +LW LD D ++P++ W+LNERHYGA+QGL+K E+ +K G VKLWRR + PP++ +P D RY ++D LP ESL + ERV+ YW E +LP +++GER ++ AH NSLR+L+K LD +GEE+ I ++ IP P VY FDE Sbjct: 6 LVLVRHGESQWNNENRFTGWMDVDLSEKGVNEAKQAGKLLKEEGFSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKCWKLNERHYGALQGLNKAETAEKYGDEQVKLWRRGFAVTPPELTRDDERFP--GHDPRYASLSDKELPLTESLALTIERVVPYWNESILPRLKKGERVIIAAHGNSLRALVKYLDNMGEEE--------------------ILELNIPTAVPLVYEFDE 220
BLAST of NO19G00380 vs. NCBI_GenBank
Match: WP_047054657.1 (2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Enterobacter hormaechei] >KLG05521.1 phosphoglyceromutase [Enterobacter hormaechei subsp. oharae] >KTH88129.1 phosphoglyceromutase [Enterobacter hormaechei subsp. oharae]) HSP 1 Score: 218.4 bits (555), Expect = 5.300e-53 Identity = 108/237 (45.57%), Postives = 148/237 (62.45%), Query Frame = 0 Query: 181 VVFVRHGQSDFNRQEIFTGWCDVDVNKKGEDECKEAGMLLASRGFTFDIAYTSVLKRAVKSLWCCLDGCDHTFIPIKMHWRLNERHYGAMQGLSKEESEKKLG-PIVKLWRRSWRGKPPDMPPSHPHYPLIRGDRRYKDVADSVLPKGESLEMCAERVMVYWEEEVLPSIRRGERPLVVAHANSLRSLIKRLDGLGEEQVEKGRQEGGRKGGKEQSIEVIEDVKIPNGRPFVYWFDE 417 +V VRHG+S +N + FTGW DVD+++KG E K AG LL GFTFD AYTSVLKRA+ +LW LD D ++P++ W+LNERHYGA+QGL+K E+ +K G VKLWRR + PP++ YP D RY + ++ LP+ ESL + +RV+ YW E +LP ++ GER ++ AH NSLR+L+K LD +GE++ I ++ IP G P VY FDE Sbjct: 6 LVLVRHGESQWNNENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGFTFDFAYTSVLKRAIHTLWNILDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKLWRRGFAVTPPELSKDDERYP--GHDPRYAKLTEAELPQTESLALTIDRVVPYWNETILPRLKSGERVIIAAHGNSLRALVKYLDNMGEDE--------------------ILELNIPTGVPLVYEFDE 220
BLAST of NO19G00380 vs. NCBI_GenBank
Match: WP_016941926.1 (2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Dickeya zeae] >AJC65675.1 phosphoglyceromutase [Dickeya zeae EC1]) HSP 1 Score: 218.0 bits (554), Expect = 6.900e-53 Identity = 108/237 (45.57%), Postives = 149/237 (62.87%), Query Frame = 0 Query: 181 VVFVRHGQSDFNRQEIFTGWCDVDVNKKGEDECKEAGMLLASRGFTFDIAYTSVLKRAVKSLWCCLDGCDHTFIPIKMHWRLNERHYGAMQGLSKEESEKKLG-PIVKLWRRSWRGKPPDMPPSHPHYPLIRGDRRYKDVADSVLPKGESLEMCAERVMVYWEEEVLPSIRRGERPLVVAHANSLRSLIKRLDGLGEEQVEKGRQEGGRKGGKEQSIEVIEDVKIPNGRPFVYWFDE 417 +V VRHG+S +N + FTGW DVD+++KG +E K+AG LL GF+FD AYTSVLKRA+ +LW LD D ++P++ W+LNERHYGA+QGL+K E+ +K G VKLWRR + PP++ +P D RY ++D LP+ ESL + ERV+ YW E +LP I++GER ++ AH NSLR+L+K LD + EE+ I ++ IP P VY FDE Sbjct: 6 LVLVRHGESQWNNENRFTGWMDVDLSEKGVNEAKQAGKLLKEEGFSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKCWKLNERHYGALQGLNKAETAEKYGDEQVKLWRRGFAVTPPELTRDDERFP--GHDPRYASLSDKELPQTESLALTIERVVPYWNENILPRIKKGERVIIAAHGNSLRALVKYLDNMSEEE--------------------ILELNIPTAVPLVYEFDE 220
BLAST of NO19G00380 vs. NCBI_GenBank
Match: WP_038925207.1 (2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Dickeya zeae]) HSP 1 Score: 218.0 bits (554), Expect = 6.900e-53 Identity = 108/237 (45.57%), Postives = 149/237 (62.87%), Query Frame = 0 Query: 181 VVFVRHGQSDFNRQEIFTGWCDVDVNKKGEDECKEAGMLLASRGFTFDIAYTSVLKRAVKSLWCCLDGCDHTFIPIKMHWRLNERHYGAMQGLSKEESEKKLG-PIVKLWRRSWRGKPPDMPPSHPHYPLIRGDRRYKDVADSVLPKGESLEMCAERVMVYWEEEVLPSIRRGERPLVVAHANSLRSLIKRLDGLGEEQVEKGRQEGGRKGGKEQSIEVIEDVKIPNGRPFVYWFDE 417 +V VRHG+S +N + FTGW DVD+++KG +E K+AG LL GF+FD AYTSVLKRA+ +LW LD D ++P++ W+LNERHYGA+QGL+K E+ +K G VKLWRR + PP++ +P D RY ++D LP+ ESL + ERV+ YW E +LP I++GER ++ AH NSLR+L+K LD + EE+ I ++ IP P VY FDE Sbjct: 6 LVLVRHGESQWNNENRFTGWMDVDLSEKGVNEAKQAGKLLKEEGFSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKCWKLNERHYGALQGLNKAETAEKYGDEQVKLWRRGFAVTPPELTREDERFP--GHDPRYASLSDKELPQTESLALTIERVVPYWNENILPRIKKGERVIIAAHGNSLRALVKYLDNMSEEE--------------------ILELNIPTAVPLVYEFDE 220
BLAST of NO19G00380 vs. NCBI_GenBank
Match: XP_023863375.1 (phosphoglycerate mutase 1 [Salvelinus alpinus]) HSP 1 Score: 218.0 bits (554), Expect = 6.900e-53 Identity = 100/237 (42.19%), Postives = 144/237 (60.76%), Query Frame = 0 Query: 181 VVFVRHGQSDFNRQEIFTGWCDVDVNKKGEDECKEAGMLLASRGFTFDIAYTSVLKRAVKSLWCCLDGCDHTFIPIKMHWRLNERHYGAMQGLSKEESEKKLGPI-VKLWRRSWRGKPPDMPPSHPHYPLIRGDRRYKDVADSVLPKGESLEMCAERVMVYWEEEVLPSIRRGERPLVVAHANSLRSLIKRLDGLGEEQVEKGRQEGGRKGGKEQSIEVIEDVKIPNGRPFVYWFDE 417 +V +RHG+S++N++ F GW D D+++ GE E K G L G+ FD+ YTSVLKRA+++LW CLD D ++P+ WRLNERHYG + GL+K E+ K G VK+WRRS+ PP M P H Y +I DRRY D+++ LP ESL+ R + YW +E++P I+RG+R L+ AH NSLR ++K L+G+ E E I ++ +P G P +Y D+ Sbjct: 6 LVLIRHGESNWNQENRFCGWFDADLSETGEREAKRGGQALKDAGYEFDVCYTSVLKRAIRTLWLCLDSIDQMWLPVNRTWRLNERHYGGLTGLNKSETAAKHGEAQVKIWRRSFDIPPPTMDPDHDFYTIISKDRRYGDLSEEQLPSCESLKDTIARALPYWNDEIVPQIKRGKRVLIAAHGNSLRGIVKHLEGMSE--------------------EAIMELNLPTGIPILYELDK 222
BLAST of NO19G00380 vs. NCBI_GenBank
Match: WP_010428758.1 (2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Enterobacter mori]) HSP 1 Score: 217.6 bits (553), Expect = 9.100e-53 Identity = 108/237 (45.57%), Postives = 147/237 (62.03%), Query Frame = 0 Query: 181 VVFVRHGQSDFNRQEIFTGWCDVDVNKKGEDECKEAGMLLASRGFTFDIAYTSVLKRAVKSLWCCLDGCDHTFIPIKMHWRLNERHYGAMQGLSKEESEKKLG-PIVKLWRRSWRGKPPDMPPSHPHYPLIRGDRRYKDVADSVLPKGESLEMCAERVMVYWEEEVLPSIRRGERPLVVAHANSLRSLIKRLDGLGEEQVEKGRQEGGRKGGKEQSIEVIEDVKIPNGRPFVYWFDE 417 +V VRHG+S +N + FTGW DVD+++KG E K AG LL GFTFD AYTSVLKRA+ +LW LD D ++P++ W+LNERHYGA+QGL+K E+ +K G VK WRR + PP++ YP D RY + D+ LP+ ESL + +RV+ YW E +LP ++ GER ++ AH NSLR+L+K LD +GE++ I ++ IP G P VY FDE Sbjct: 6 LVLVRHGESQWNNENRFTGWYDVDLSEKGVSEAKAAGKLLKDEGFTFDFAYTSVLKRAIDTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYP--GHDPRYAKLTDAELPQTESLALTIDRVVPYWNETILPRLKSGERVIIAAHGNSLRALVKYLDNMGEDE--------------------ILELNIPTGVPLVYEFDE 220
BLAST of NO19G00380 vs. NCBI_GenBank
Match: WP_058685257.1 (2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Enterobacter hormaechei] >KTJ40013.1 phosphoglyceromutase [Enterobacter hormaechei subsp. oharae]) HSP 1 Score: 217.6 bits (553), Expect = 9.100e-53 Identity = 108/237 (45.57%), Postives = 148/237 (62.45%), Query Frame = 0 Query: 181 VVFVRHGQSDFNRQEIFTGWCDVDVNKKGEDECKEAGMLLASRGFTFDIAYTSVLKRAVKSLWCCLDGCDHTFIPIKMHWRLNERHYGAMQGLSKEESEKKLG-PIVKLWRRSWRGKPPDMPPSHPHYPLIRGDRRYKDVADSVLPKGESLEMCAERVMVYWEEEVLPSIRRGERPLVVAHANSLRSLIKRLDGLGEEQVEKGRQEGGRKGGKEQSIEVIEDVKIPNGRPFVYWFDE 417 +V VRHG+S +N + FTGW DVD+++KG E K AG LL GFTFD AYTSVLKRA+ +LW LD D ++P++ W+LNERHYGA+QGL+K E+ +K G VK WRR + PP++ YP D RY +A++ LP+ ESL + +RV+ YW E +LP ++ GER ++ AH NSLR+L+K LD +GE++ I ++ IP G P VY FDE Sbjct: 6 LVLVRHGESQWNNENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGFTFDFAYTSVLKRAIHTLWNILDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPELSKDDERYP--GHDPRYAKLAEAELPQTESLALTIDRVVPYWNETILPRLKSGERVIIAAHGNSLRALVKYLDNMGEDE--------------------ILELNIPTGVPLVYEFDE 220 The following BLAST results are available for this feature:
BLAST of NO19G00380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00380 ID=NO19G00380|Name=NO19G00380|organism=Nannochloropsis oceanica|type=gene|length=5218bpback to top protein sequence of NO19G00380.1 >NO19G00380.1-protein ID=NO19G00380.1-protein|Name=NO19G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=526bpback to top Synonyms
Publications
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