NO19G00240, NO19G00240 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00240 vs. NCBI_GenBank
Match: EWM25571.1 (wsc domain containing 1 [Nannochloropsis gaditana]) HSP 1 Score: 202.2 bits (513), Expect = 3.100e-48 Identity = 96/168 (57.14%), Postives = 117/168 (69.64%), Query Frame = 0 Query: 240 EEEKEKAILSLAECRTNYGERRFLHEDEKALPPILYSFPGSGNTWTRLLIDFSTGIYTGTIFAKPKNKPEKTKLPGQGYCNHMVSAIKAHPNQISPEELFTVPPSDPRIGRCNSLGNITSFDRFILLTRNPFDAIWSEYRRTANDVHYILRDDFDSSQFAHTVVSKSS 408 E K + + +L EC+ +Y +RRFL E+E+ +PPILYSFPGSGNTWTRLLID STG+++GT+ AK K +K GQG+C+ VS +KAHPN PE LFTV GRCN G I +F RFILL RNPFDAIWSEYRRTA + H+ L DDFD FA +SK S Sbjct: 273 EHAKGETVPTLEECKASYAKRRFLDENEEVVPPILYSFPGSGNTWTRLLIDISTGVHSGTLLAKRPGK--VSKFEGQGHCSKRVSVLKAHPNHFPPERLFTV------TGRCNDWGGIKAFRRFILLMRNPFDAIWSEYRRTATEAHFFLSDDFDLEAFATVAISKMS 432
BLAST of NO19G00240 vs. NCBI_GenBank
Match: EWM24512.1 (isoform b [Nannochloropsis gaditana]) HSP 1 Score: 129.4 bits (324), Expect = 2.500e-26 Identity = 73/160 (45.62%), Postives = 91/160 (56.88%), Query Frame = 0 Query: 249 SLAECRTNYGERRFLHEDEKALPPILYSFPGSGNTWTRLLIDFSTGIYTGTIFAKPKNKPEKTK-LPGQGYCNHMVSAIKAHPNQISPEELFTVPPSDPRIGRCNSLGNI-TSFDRFILLTRNPFDAIWSEY-RRTANDVHYILRDD--FDSSQFAHTVV 404 S EC YG RRFL + P +LYS+PGSGNT+TRLLID +TG+YTG I N P + LPGQ +C+ V AIKAHP Q P +L D C + G + F+RFILL+R+P+ AIWSEY RR N H+ D FD F + Sbjct: 141 SREECSLRYGARRFLDPNPNFTPAVLYSYPGSGNTFTRLLIDHATGVYTGAILG--VNDPRLAEALPGQSHCDSSVIAIKAHPKQFRPLKLLAGQLPD----NCQAEGGLRQGFERFILLSRDPYAAIWSEYQRRLNNGSHHQAADPAAFDPEHFGRVAM 294
BLAST of NO19G00240 vs. NCBI_GenBank
Match: XP_005759647.1 (Hypothetical protein EMIHUDRAFT_198564 [Emiliania huxleyi CCMP1516] >EOD07218.1 Hypothetical protein EMIHUDRAFT_198564 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 105.9 bits (263), Expect = 3.000e-19 Identity = 51/130 (39.23%), Postives = 74/130 (56.92%), Query Frame = 0 Query: 260 RRFLHEDEKALPPILYSFPGSGNTWTRLLIDFSTGIYTGTIFAKPKNKPEKTKLPGQGYCNHMVSAIKAHPNQISPEELFTVP---------PSDPRIGRCNSLGNITSFDRFILLTRNPFDAIWSEYRR 381 R+F ALPP+L++FPGSGNTW RLL+DF+TG YTG++++ P LPG+G C+ A+KAHP + + P P +C L FD ++LTR+P+ +IW+EY+R Sbjct: 8 RQFRQPGSGALPPLLWTFPGSGNTWLRLLLDFATGTYTGSVYSDVSLLP---LLPGEGTCDSRALAVKAHPTNVDFHDFVRTPGEPGFRLNVTRKPAYLKCAPL----RFDALVMLTRDPYASIWAEYKR 130
BLAST of NO19G00240 vs. NCBI_GenBank
Match: XP_001742512.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ92750.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 87.0 bits (214), Expect = 1.400e-13 Identity = 44/110 (40.00%), Postives = 68/110 (61.82%), Query Frame = 0 Query: 271 PPILYSFPGSGNTWTRLLIDFSTGIYTGTIFAKPKNKPEKTKLPGQGYCNHMVSAIKAHPNQISPEELFTVPPSDPRIGRCNSLGNITSFDRFILLTRNPFDAIWSEYRR 381 PP+LYS PGSGNT+ R L+D +TG Y+G+++ + LPG+G+CNH VS +KAHPN S ++L P+ R N FD F ++ R+ + A+++E++R Sbjct: 280 PPVLYSAPGSGNTFVRTLLDAATGYYSGSLYL---DATLIDSLPGEGHCNH-VSVVKAHPNMHSVDDLLGQTPTLRR--------NCGPFDAFAIVIRDFYHAVFAEFQR 377
BLAST of NO19G00240 vs. NCBI_GenBank
Match: XP_005757047.1 (hypothetical protein EMIHUDRAFT_259515 [Emiliania huxleyi CCMP1516] >EOD04618.1 hypothetical protein EMIHUDRAFT_259515 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 84.0 bits (206), Expect = 1.200e-12 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 0 Query: 260 RRFLHEDEKALPPILYSFPGSGNTWTRLLIDFSTGIYTGTIFAKPKNKPEKTKLPGQGYCNHMVSAIKAHPNQIS 335 R+F ALPP+L++FPGSGNTW RLL+DF+TG YTG++++ P LPG+G C+ A+KAHP S Sbjct: 8 RQFRQPGSGALPPLLWTFPGSGNTWLRLLLDFATGTYTGSVYSDVSLLP---LLPGEGTCDSRALAVKAHPTNAS 79
BLAST of NO19G00240 vs. NCBI_GenBank
Match: XP_004991370.1 (hypothetical protein PTSG_07574 [Salpingoeca rosetta] >EGD76455.1 hypothetical protein PTSG_07574 [Salpingoeca rosetta]) HSP 1 Score: 81.6 bits (200), Expect = 6.000e-12 Identity = 48/127 (37.80%), Postives = 72/127 (56.69%), Query Frame = 0 Query: 259 ERRFL-HEDEKALPPILYSFPGSGNTWTRLLIDFSTGIYTGTIFAKPKNKPEKTKLPGQGYCNHMVSAIKAH----PNQISPEELFTVPPSDPRIGRCNSLGNITSFDRFILLTRNPFDAIWSEYRR 381 +R FL + P +L+S PGSGNT TRLLI+++TG TG+ + +K LPG+ C+ V A+K H P + + E+ +T G C+ ++ F R I+L RNP DAIW++Y+R Sbjct: 73 QRHFLPPAQQHKAPALLWSQPGSGNTMTRLLIEYATGYLTGSPYG---DKSLLDVLPGEDTCDSSVIAVKLHPLINPRRTNKEDHYTATFKREH-GVCD---GVSVFARAIILVRNPLDAIWADYQR 192
BLAST of NO19G00240 vs. NCBI_GenBank
Match: ELU11434.1 (hypothetical protein CAPTEDRAFT_193836 [Capitella teleta]) HSP 1 Score: 77.8 bits (190), Expect = 8.700e-11 Identity = 49/144 (34.03%), Postives = 72/144 (50.00%), Query Frame = 0 Query: 257 YGERRFLHE------------DEKALPPI--LYSFPGSGNTWTRLLIDFSTGIYTGTIFAKPKNKPEKTKLPGQGYCNHMVSAIKAHPNQISPEELFTVPPSDPRIGRCNSLGNITSFDRFILLTRNPFDAIWSEYRRTANDVH 387 YG RR +H +E +L P+ L S+PGSGNTWTR LI+ STG YTG+I+ K+K K PG+G + V +K H P ++ R ++R +L+ R P DA+ +E++RT+ H Sbjct: 140 YGHRRKIHRNRTSCLDKTFAGNETSLLPLTALASYPGSGNTWTRHLIELSTGFYTGSIY---KDKVLKVSFPGEGEQSGSVITVKTH-----------WPWVTKKLDR-------VEYERVVLIIRTPLDAMKAEFKRTSKRSH 262
BLAST of NO19G00240 vs. NCBI_GenBank
Match: XP_004993560.1 (hypothetical protein PTSG_05694 [Salpingoeca rosetta] >EGD73997.1 hypothetical protein PTSG_05694 [Salpingoeca rosetta]) HSP 1 Score: 71.2 bits (173), Expect = 8.200e-9 Identity = 49/153 (32.03%), Postives = 75/153 (49.02%), Query Frame = 0 Query: 244 EKAILSLAECRTNYGERRFLHEDEKAL----PPILYSFPGSGNTWTRLLIDFSTGIYTGTIFAKPKNKPEKTKLPGQGYCNHMVSAIKAHPN--QISPE---ELFTVPPSDPRIG-RCNSLGNITSFDRFILLTRNPFDAIWSEYRRTANDVH 387 E+A ECR + G R ED L PP+L + PGSGNTW R+L+++ TG ++ +++ K K +PG+ C++ +K+H + PE +LF + P + G C L FD I + R+PF A +E R H Sbjct: 99 EQADEEARECR-HVGRRYVTPEDRARLPHAKPPLLLTLPGSGNTWFRMLLEYGTGFFSSSVYNDFK---LKEVMPGELRCDNTTIVVKSHMHLGSYDPEVYNKLFKMQPGELAHGYPCREL---RPFDSVIGIIRDPFHAALAEATRQLTGGH 244
BLAST of NO19G00240 vs. NCBI_GenBank
Match: ELU11425.1 (hypothetical protein CAPTEDRAFT_193827 [Capitella teleta]) HSP 1 Score: 71.2 bits (173), Expect = 8.200e-9 Identity = 44/115 (38.26%), Postives = 60/115 (52.17%), Query Frame = 0 Query: 274 LYSFPGSGNTWTRLLIDFSTGIYTGTIFAKPKNKPEKTKLPGQGYCNHMVSAIKAHPNQISPEELFTVPPSDPRIGRCNSLGNITSFDRFILLTRNPFDAIWSEY--RRTANDVH 387 L SFPGSGNTWTR LI+ STG YTG I+ K+ K PG+G + V A+K H PR + + ++R +L+TR P DA+ +E+ +RT N H Sbjct: 103 LASFPGSGNTWTRHLIELSTGFYTGAIY---KDGLLKKAFPGEGNRSRSVIAVKTH---------------WPRFRTVDRV----EYERVVLITRTPLDAMKAEFTRQRTPNRSH 195
BLAST of NO19G00240 vs. NCBI_GenBank
Match: XP_002735861.2 (PREDICTED: WSC domain-containing protein 2-like [Saccoglossus kowalevskii]) HSP 1 Score: 69.7 bits (169), Expect = 2.400e-8 Identity = 41/119 (34.45%), Postives = 59/119 (49.58%), Query Frame = 0 Query: 263 LHEDEKALPPI-LYSFPGSGNTWTRLLIDFSTGIYTGTIFAKPKNKPEKTKLPGQGYCNHMVSAIKAHPNQISPEELFTVPPSDPRIGRCNSLGNITSFDRFILLTRNPFDAIWSEYRR 381 LH K LP + L SFPGSGNTW R L+ +TGIYTG+I+ K E G+G+ ++ V +K H ++ + + +L+ R+PFDAI SE+ R Sbjct: 91 LHFSNKPLPLVALASFPGSGNTWVRHLLQQATGIYTGSIYNDKSLKRE--GFDGEGFTDNSVIVVKTHEWDNH---------------------TLSKYQKAVLIVRDPFDAIRSEFNR 186 The following BLAST results are available for this feature:
BLAST of NO19G00240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 17
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00240 ID=NO19G00240|Name=NO19G00240|organism=Nannochloropsis oceanica|type=gene|length=2811bpback to top protein sequence of NO19G00240.1 >NO19G00240.1-protein ID=NO19G00240.1-protein|Name=NO19G00240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=539bpback to top protein sequence of NO19G00240.2 >NO19G00240.2-protein ID=NO19G00240.2-protein|Name=NO19G00240.2|organism=Nannochloropsis oceanica|type=polypeptide|length=410bpback to top Synonyms
Publications
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