NO19G00170, NO19G00170 (gene) Nannochloropsis oceanica

Overview
NameNO19G00170
Unique NameNO19G00170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2852
Alignment locationchr19:54128..56979 -

Link to JBrowse

Properties
Property NameValue
DescriptionCAP domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:54128..56979 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR035940CAP_sf
IPR014044CAP_domain
Homology
BLAST of NO19G00170 vs. NCBI_GenBank
Match: EWM23498.1 (CAP domain protein [Nannochloropsis gaditana])

HSP 1 Score: 462.2 bits (1188), Expect = 2.200e-126
Identity = 214/317 (67.51%), Postives = 250/317 (78.86%), Query Frame = 0
Query:  119 MPRGGTGATSPKGYSLVEDRPRCYFTLGSNYCPAAPNNIWTNSYMSYLERTSQVLANAARMDPAAFQRIYNGNNRDTYKCTTRALPPLRYSANAQQAAVKASQILADPNCPFQHDTCRSYCGLYGGSCSWDARIGTYEPEWRGMGENIAMTTNAGQKEPTTAVLQWLASAPHCANIYSTSFTHIGVGGWGRYWTQNFLRMPSSTDNPLYDGTHYSHSTHTDGKLRFLVSFKSSAAPQSMKVVVNGVERPMSLHLGRATQGLYSFEQANPGTTVGCLSYRFFVRTSTGSTYRMPETGDFQTAT-------VGSCTSNW 429
            M R G+GA SPKGYSLVEDRPRCYFTLG +YCPAA NN WT+ YMSY+ERTSQVL NAARMDP  F+RIYNGN+  TYKC+TR LPPLRYSANAQQAA+K SQ+LADPNCPFQHDTC  YC LYGG C+WDARI  YE  WRGMGENIAMT    ++EP+  VLQWLAS PHC+NI+S  F+H+G G + RYWTQ+FL++  ST+NPL+DGTHY H   T GKLRF+ SFKSS+AP  M+VVVNG  + MSLHLG + QGLY++EQ+ PG++ GC+SY F V TS+GSTY MPETG FQTAT          C+S W
Sbjct:    1 MLREGSGANSPKGYSLVEDRPRCYFTLGKDYCPAATNNKWTDYYMSYIERTSQVLTNAARMDPQDFKRIYNGNDGGTYKCSTRTLPPLRYSANAQQAALKESQMLADPNCPFQHDTCNKYCRLYGGKCNWDARISKYESNWRGMGENIAMTQRNLKEEPSAPVLQWLASGPHCSNIFSGDFSHLGTGAYDRYWTQDFLKLSGSTNNPLHDGTHYLHPAKTGGKLRFMASFKSSSAPNKMEVVVNGQAKSMSLHLGSSAQGLYAYEQSQPGSSAGCISYYFVVTTSSGSTYNMPETGAFQTATRDHGSGKEKGCSSRW 317          
BLAST of NO19G00170 vs. NCBI_GenBank
Match: EPZ32534.1 (hypothetical protein O9G_002311 [Rozella allomycis CSF55])

HSP 1 Score: 113.6 bits (283), Expect = 1.900e-21
Identity = 89/278 (32.01%), Postives = 130/278 (46.76%), Query Frame = 0
Query:  164 SYLERTSQVLANAARMDPAAFQRIYNGNNRDTYKCTTRALPPLRYSAN---AQQAAVKASQILADPNCPFQHDTCRSYCGLYGGSCSWDARIGTY--EPEWRGMGENIAMTTNAGQKEPTTAVLQWLAS-APHCANIYSTSFTHIGVGGWGRYWTQNFLRMPSSTD--NPLYDGTHYSH--STHTDGKLRFLVSFKSSAAPQSMKVVVNGVERPMSLHLGRATQGLYSFEQANPGTTVG---CLSYRFFVRTSTGSTYRMPETGDFQTATVGSCTSNW 429
            +YLERT   L NA R+DP ++  + N +N  T  C     P      N    Q      + +   P C +QHDTC S C  + GSCSW +RI ++  +P W      IA    AG   P   +  W+ S   HC N+ + S T +GV        Q+F    S+TD  + L  G+H S   ++     L FLV++ + A P  + + +    R +SL  G + +G+Y F + N G  +G   C +Y F V  + G  YR PE G F T  +  C  N+
Sbjct:   29 TYLERTIHTLTNAVRIDPKSY--LNNFSNAGTGNCLYNGSPARHLFWNMALTQSGRFHCTSMQRSPGC-WQHDTCPSECYKF-GSCSWSSRIWSFYKKPAW------IAENIYAGPISPVEIMDGWIRSKMGHCENLLAASATELGVANSNNCVIQDF-GGASNTDYNSALVIGSHVSPKLTSLNTNNLLFLVTYVNDAPPSKIWIQIGQQARGLSLLYGSSNRGVYYF-KLNDGNLLGNQSCQNYFFRVIDTKGRNYRFPEKGRFLTFGINGCNQNY 294          
BLAST of NO19G00170 vs. NCBI_GenBank
Match: XP_002671152.1 (predicted protein [Naegleria gruberi] >EFC38408.1 predicted protein [Naegleria gruberi])

HSP 1 Score: 111.3 bits (277), Expect = 9.500e-21
Identity = 90/294 (30.61%), Postives = 131/294 (44.56%), Query Frame = 0
Query:  161 SYMSYLERTSQVLANAARMDPAAFQRIYNGNNRDTYKCTTRALPPLRYSANAQQAAVKASQILADPNCPFQHDTCRSYCGLYGGSCSWDARIGTYEPEWRGMGENIAMTTNAGQKEPTTAVLQWLASAPHCANIYSTSFTHIGVG--------GWGRYWTQNFLRMPSSTDNPLYDGTHYSHSTHTDGKLRFLVSFKSSA------APQSMKVVVNGVERPMSLHLGRATQGLYSFEQANPGT----------TVGCLSYRFFVRTSTGSTYRMPETGDFQTATVGS-CTSNWV 430
            +Y  Y+E+T  VL N ARM P+ F+  +    +      T  LPPL    N  ++    S+ +A   C FQH++C        G+ ++  R+ T+  +   M ENIA    AGQ  P +  + W+ S  H ANI  +S+T +GVG        G+  YWTQNF        NP+   TH + +T T   + FL ++   A      AP ++ + +N VE PMS+     T  +Y+    N GT             C  Y      S G  Y  P  G   T    S CTSN++
Sbjct:   97 TYSRYVEKTVHVLTNWARMSPSGFKTRFLNLFQAEKSLETTGLPPLFEHFNLVESGRFHSKDMATVPC-FQHNSC-------DGTLTF-TRVATFYTKPAAMAENIA----AGQTSPLSVTMAWINSDGHRANILGSSYTLLGVGHYPKVAATGFSDYWTQNFASGSHGISNPIVAATHITFATDT---VTFLANYYHKADLGKGVAPLNVSIFINDVEYPMSI----PTSSMYTDSSLNAGTFEYNTTRLSSGTACRKYYIKAVDSNGYKYYYPSVGYLLTQGENSACTSNYL 370          
BLAST of NO19G00170 vs. NCBI_GenBank
Match: XP_004339290.1 (papain family cysteine protease [Acanthamoeba castellanii str. Neff] >ELR17277.1 papain family cysteine protease [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 93.6 bits (231), Expect = 2.000e-15
Identity = 93/295 (31.53%), Postives = 123/295 (41.69%), Query Frame = 0
Query:  164 SYLERTSQVLANAARMDPAAFQRIYNGNNRDTYKCTTRALPPLRYSANAQQAAVKASQILADPNCPFQHDTCRSYCGLYGGSCSWDARI-GTYEPEWRGMGENI-AMTTNAGQKEPTTAVLQWLASAP---HCA----------------NIY-STSFTHIGVG------GWGRYWTQNFLRMPSST-DNPLYDGTHYSHSTHTDGKLRFLVSF-KSSAAPQSMKVVVNGVERPMSLHLGRATQGLYSFEQANPGTTVGCLSYRFFVRTSTGSTYRMPETGDFQTATVGSCTSNW 429
            SY ERT   L NAAR+ PA ++  Y      T   TT A  PL +     Q A   S  L          TC           +W  R+  TY      +GEN+ A  +N         +  W   A    +C                 N+Y S S+T +GVG          YWT +     + T  N +  G   SH   T  K RF  ++  +S APQS +VVVNG    ++L  G A +G Y F Q   GT  GC SY F   +++G  YR PETG F T   G+C ++W
Sbjct:   35 SYQERTFASLINAARVGPAGYRTNYMTGLTTTGILTTAAKAPLYFDPLLSQTARAHSTDLT---------TCHKVQFNSCNGLAWSTRVRNTYTCTSGSIGENLQAAYSNNPLSAVNDGLCGWTQKADGSYYCCPDGGKNTAGQACDGSRNMYLSLSYTRLGVGLGTDSTNGLSYWTTDLGSCNTETYANRIASG---SHILQTGSKTRFFAAYWDASGAPQSAQVVVNGAASNLALDTGVAGKGNY-FVQLATGT--GCRSYYFQFTSASGGVYRYPETGYFNTYGEGACVTDW 314          
BLAST of NO19G00170 vs. NCBI_GenBank
Match: XP_004348569.1 (mucin, putative, partial [Acanthamoeba castellanii str. Neff] >ELR22111.1 mucin, putative, partial [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 86.3 bits (212), Expect = 3.300e-13
Identity = 90/305 (29.51%), Postives = 127/305 (41.64%), Query Frame = 0
Query:  160 NSYMSYLERTSQVLANAARMDPAAFQRIYNGNNRDTYKCTTRALP---PLRYSANAQQAAVKASQILADPNCPFQHDTCRSYCGLYGGSCSWDARIGTYEPEWRGMGENIAMTTNAGQKEPTTAVLQ----W----------------LASAPHC---ANIY-STSFTHIGVGGWGR-------YWTQNFLRMPSST-DNPLYDGTHYSHSTHTDGKLRFLVSFKSS-AAPQSMKVVVNGVERPMSLHLGRATQGLYSFEQANPGTTVGCLSYRFFVRTSTGSTYRMPETGDFQTATVGSCTSNW 429
            +S  SY ERT   L NAAR+ P+ F   Y              LP   PL +     +AA   SQ LA+     Q ++C           +W  R+         +GE +     A   +P TAV      W                 +S   C    N+Y S+S++  GV G+G        YWT ++    + T  NP+  G+H   S    G +RF  ++  +  APQS KV V G    ++L  G   QG Y    A      GC SY F   +++G  YR+PETG F T   GSC+++W
Sbjct:   33 SSRPSYQERTVGALINAARVGPSGFAAAYMATAGYPASGIADGLPAQLPLYFDPKLSEAASGHSQDLANNCHAVQFNSC--------DGTAWYTRVRNIYSCTGLVGEGLQY---AYSGDPLTAVSDGVCGWNQDASGNYVCCPASGKTSSGSTCNGLRNMYLSSSYSRFGV-GYGADAQTGYYYWTTDYGACNTETYANPIASGSHLIQS----GNVRFFAAYYDAVGAPQSAKVFVGGSPLDLALDAGTGNQGNY---YAVSAAGSGCRSYYFQFTSASGGVYRLPETGYFNTFGEGSCSTDW 318          
BLAST of NO19G00170 vs. NCBI_GenBank
Match: ADI17217.1 (uncharacterized protein with scp/pr1 domains [uncultured delta proteobacterium HF0070_10I02])

HSP 1 Score: 79.0 bits (193), Expect = 5.200e-11
Identity = 77/278 (27.70%), Postives = 114/278 (41.01%), Query Frame = 0
Query:  152 AAPNNIWTNSYMSYLERTSQVLANAARMDPAAFQRIYNGNNRDTYKCT------TRALP--PLRYSANAQQAAVKASQILADPNCPFQHDTCRSYCGLYGGSCSWDARIGTYEPEWRGMGENIAMTTNAGQKEPTTAVLQWLASAPHCANIYSTSFTHIGVGGWGRYWTQNFLRMPSSTDNPLYDGTHYSHSTHTDGKLRFLVSFKSSAAPQSMKVVVNGVERPMSLHLGRATQGLYSFEQANPGTTVGCLSYRF-FVRTSTGSTYRMPETGDFQTAT 421
            A   ++  + Y S+ ER   +  N  R+DP+AF   +     D+  C         ++P  PL Y  +   +    SQ + D N  F H +            S+  R+  +  E   +GENIA   N      +     W+ SA H ANI +  +  +GVG    Y+TQNF     +TD P+    H        G +     F+    P S   +V+G   P+SL  G A QG+YS E    G  + C  Y F + +     TY  PE G +   T
Sbjct:   12 AGYGDVTVDGYPSWAERDVHLWTNVVRVDPSAF---FGPGAPDSRPCDLDDFVGDESVPKAPLFYEYHLNDSGRFHSQDMYD-NDWFNHSS--------SDGTSFGERVARFYQESGYIGENIA---NGYANGESVVFDGWMCSAGHRANIMNGDYNEMGVGVVSLYYTQNFAEGTLATDGPIAMANHLPEI--PTGPVEIFADFQ-GFEPDSFDAIVDGKPIPLSLTYGVAHQGVYSTEMTATG-ELDCHEYYFRWTKGDRRGTY--PEDGSYMFGT 268          
BLAST of NO19G00170 vs. NCBI_GenBank
Match: XP_002673959.1 (predicted protein [Naegleria gruberi] >EFC41215.1 predicted protein [Naegleria gruberi])

HSP 1 Score: 78.2 bits (191), Expect = 8.900e-11
Identity = 80/277 (28.88%), Postives = 116/277 (41.88%), Query Frame = 0
Query:  159 TNSYMSYLERTSQVLANAARMDPAAFQRIYNGNNRDTYKCTTRALPPLRYSANAQQAAVKASQILADPNCPFQHDTCRSYCGLYGGSCSWDARIGT-YEPEWRGMGENIAMTTNAGQKEPTTAVLQWLASAPHCANIYSTSFTHIGVG--------GWGRYWTQNFLRMPSSTDNPLYDGTHYSHSTHTDGKLRFLVSF------KSSAAPQSMKVVVNGVERPMSLHL-----GRATQGLYSFE-QANPGTTVGCLSYRFFVRTSTGSTYRMPETG 415
            T  Y  Y E+T  VL N ARM P  F+  +    +         L PL    N  ++A   S  ++  NC F H +C        G  ++  RI T Y     GM ENIA    AGQ  P    + W+ S  H ANI   SF+ +GVG         +  YWTQNF+       NP+      SH   T G+L FL ++       +S   +S+++ ++     M+L +      ++  G+ +FE   +  +T  C  Y      S G  Y  P  G
Sbjct:   88 TYLYSLYFEKTVHVLTNWARMSPVGFKSRFGSLFKSGVSLAASGLVPLFEHFNLVESARYHSYDMSFNNC-FSHASC-------NGEDTF-VRIATFYNRNNIGMAENIA----AGQTTPLDVTMTWINSDLHRANILG-SFSLLGVGYFPKLNNADYSDYWTQNFVSGSHGISNPI---VSVSHLILTSGQLTFLANYYHKYDITNSKQLKSIQLFIDDKGYTMTLPVTNQFDDKSANGMGTFEFTTSVNSTATCRKYYVKAIDSFGYAYYYPAFG 347          
BLAST of NO19G00170 vs. NCBI_GenBank
Match: XP_020435860.1 (hypothetical protein PPL_02810 [Heterostelium album PN500] >EFA83743.1 hypothetical protein PPL_02810 [Heterostelium album PN500])

HSP 1 Score: 77.4 bits (189), Expect = 1.500e-10
Identity = 77/296 (26.01%), Postives = 129/296 (43.58%), Query Frame = 0
Query:  159 TNSYMSYLERTSQVLANAARM-DPAAFQRIYNGNNRDTYKCTTRALPPLRYSANAQQAAVKASQILADPNCPFQHDTCRSYCGLYGGSCSWDARIGTYEPE-WRGMGENIAMTTNAGQKEPTTAVLQWLASAP--------------HCANIYSTSFTHIG-------VGGWGRYWTQNF-----LRMPSSTDNPLYDGTHYSHSTHTDGKLRFLVSFKSSAAPQSMKVVVN------GVERPMSLHLGRATQGLYSFEQANPGTTVGCLSYRFFVRTSTGSTYRMPETGDFQTAT 421
            ++ + ++ ER + ++ N+ R+ +   F    N  + + Y     A+ P+ Y     + +   S  +A   C FQHD+C        G+          +P+  R   ENIA    AG       +  W+                  H   + S+ +  +G          +  YWTQ+F      ++P S   P+  G+H    T  + KLR+L ++ S+AAP S+K+ +N        +  +SLHLG A++G+Y +E   P T   C SY F   T+ G+TYR P +G  +T T
Sbjct:   26 SSGHPNWQEREAHMILNSVRIANYFPFTLPSNVMSNEKYP----AVDPVYYDDKMNKLSKLHSDDMAMNGC-FQHDSC-------NGTGIMQRVFANLDPKCLRAFAENIA----AGYSSGLDIINYWICEKTLTGKECYPDGTKDGHRVALMSSKYNTVGTSRVVNDTSRFKTYWTQDFELNGCNKVPPS---PIPSGSH----TFVNNKLRYLAAWSSTAAPTSVKIHLNQRLLSDEKQYQLSLHLGSASKGIYMYE---PDTYNECQSYFFTFTTADGTTYRYPTSGFLKTVT 295          
BLAST of NO19G00170 vs. NCBI_GenBank
Match: PKN27993.1 (hypothetical protein CVU65_00630 [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-22])

HSP 1 Score: 73.6 bits (179), Expect = 2.200e-9
Identity = 83/300 (27.67%), Postives = 112/300 (37.33%), Query Frame = 0
Query:  160 NSYMSYLERTSQVLANAARMDPAA-FQRIYNGNNRDTYKCTTRALPPLRYSANAQQAAVKASQILADPNCPFQHDT-CR---SYCGLYGGSCSWDA-------------------RIGTYEPEWRGMGENIAMTTNAG-------QKEPTTAVLQWLASAPHCANIYSTSFTHIGVGGWGRYWTQNFLRMPSSTDNPLYDGTHYSHSTHTDGKLRFLVSFKSSAAPQSMKVVVNGVERPMSLHLGRATQGLYSFEQANPGTTVGCLSYRFFVRTSTGSTYRMPETGDFQTATVGSCTSNW 429
            N + S+ ER   V+ N +R DP        N        C    LP + +  N  +AA   +  L    C   H++ C+   +   LY GSC   A                   R+  +    R   ENIA   +          +  +T    W     H  NI   + T IGVGG G Y  Q+F     ST   L  G HY  S      + F VS+  +AAP    V V+G   PM++  G     +Y   QA      GC  Y F  +TS G+  R P TG F       C  +W
Sbjct:   34 NGFPSWYERFIHVMVNRSRADPPVDLAACINSGACPDGVCFPTPLPAMGWDYNLARAARFHAANLTATGCGMMHNSPCQLVSNISDLYPGSCDGSAACACSGGTASCSGGNDFASRLSLFGASPR--AENIAWLGDPFDVFYAWLHENTSTGTCAWSMENGHRWNILGDAGT-IGVGGQGGYTVQDFSYGGPST--KLVVGAHYPES---GSSVDFYVSWYDTAAPSLATVDVDGTCTPMTVERGTGGNVVYKITQA---VGAGCHRYAFVFKTSGGTRERFPSTGAFGI----GCGEDW 318          
BLAST of NO19G00170 vs. NCBI_GenBank
Match: XP_629676.1 (hypothetical protein DDB_G0292288 [Dictyostelium discoideum AX4] >EAL61268.1 hypothetical protein DDB_G0292288 [Dictyostelium discoideum AX4])

HSP 1 Score: 72.0 bits (175), Expect = 6.400e-9
Identity = 85/301 (28.24%), Postives = 125/301 (41.53%), Query Frame = 0
Query:  162 YMSYLERTSQVLANAARMDPAAFQRIYNGNNRDTYK-------CTTRALPPLRYSANAQQAAVKASQILADPNCPFQHDTCRSYCGLYGGSCSWDARIGTYE--PEWRGMGENIAMTTNAGQKEPTTAVLQWLASA---------PHCANIYSTSFTHIGVG-------GWGRYWTQNFLRMPSS-TDNPLYDGTHYSHSTHTDG-KLRFLVSFKSSAAP-QSMKVV-VNGVERPMSLHLGRATQGLYSFEQANPGTTVG---CLSYRFFVRTSTGSTYRMPETGDFQTA-TVGSCTSNWV 430
            Y S+ ER S  L N  RM PA     Y  N  + YK           A+PP+ Y++     A   S  +A   C F H++C        G+  W  R  ++          ENIA   ++G +     +   + S           H  NI S S +++GVG        +G YWTQ+F     S  D P+Y   H    T   G K +F+  + +   P  S+++V V+G    M+L  G +T G Y        TT     C  Y F ++T +G TYR P+TG  Q    + +   +WV
Sbjct:   32 YPSHFERESHNLVNLVRMFPAQ----YKANYMNDYKSMGLENILNVPAVPPVWYNSTLNDLARFHSNDMATYPC-FSHNSC-------DGTDIW-KRFNSFITCSNAGSRSENIAAGYSSGIQTNNQLLCDKVGSICATDASDNDGHRVNIMSKSTSNLGVGHVYVKGSTYGSYWTQDFTSGSCSLPDTPIYSAYH----TFPSGTKPQFIAIYYNQTMPADSIELVFVDGDSIDMTLTYGSSTAGAYM-------TTTDFNYCAQYYFDIKTESGETYRYPDTGFLQLVNNLNASCPSWV 308          
The following BLAST results are available for this feature:
BLAST of NO19G00170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 13
Match NameE-valueIdentityDescription
EWM23498.12.200e-12667.51CAP domain protein [Nannochloropsis gaditana][more]
EPZ32534.11.900e-2132.01hypothetical protein O9G_002311 [Rozella allomycis... [more]
XP_002671152.19.500e-2130.61predicted protein [Naegleria gruberi] >EFC38408.1 ... [more]
XP_004339290.12.000e-1531.53papain family cysteine protease [Acanthamoeba cast... [more]
XP_004348569.13.300e-1329.51mucin, putative, partial [Acanthamoeba castellanii... [more]
ADI17217.15.200e-1127.70uncharacterized protein with scp/pr1 domains [uncu... [more]
XP_002673959.18.900e-1128.88predicted protein [Naegleria gruberi] >EFC41215.1 ... [more]
XP_020435860.11.500e-1026.01hypothetical protein PPL_02810 [Heterostelium albu... [more]
PKN27993.12.200e-927.67hypothetical protein CVU65_00630 [Deltaproteobacte... [more]
XP_629676.16.400e-928.24hypothetical protein DDB_G0292288 [Dictyostelium d... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL015nonsL015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR055ncniR055Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007691NSK007691Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G00170.1NO19G00170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|607185gene_9774Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100414g4gene6954Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G00170.1NO19G00170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G00170 ID=NO19G00170|Name=NO19G00170|organism=Nannochloropsis oceanica|type=gene|length=2852bp
ACAGTCAGGATGAAGATCACCCACTCCTCCTGGGCACTTTTCGTTGCCAT
GGCTGCCATTGTTGTGCATGGCCAGGAAGGCCCGCAACACTTCCTCCGTG
CAACGGGCCGTCGCCTTACCACCACTACCACCACCACCACAGCCTCGGAA
GCCACCCCTCCTCTGCCCTCGTTTGTAAAGCGCGCCTTGCAAAGCATTTT
CACCTTTTCAGCGCTCTTTAATGACACTATAGAGACGACCACACCCACGG
ACCCACCTCTCGTGACGTACCAAGGGGCCGGCACCGGTGCCTGGGGCGTC
CAAGCCAACCGCACCTTCCCCGCGGAACAGAATGGAAGCAGCATGCAAGA
ACAAGATGTGGTCATGCCGCGAGGTGGTACGGGGGCCACGTCTCCCAAGG
GCTACTCGCTGGTGGAGGACCGGCCCAGGTGCTATTTTACCCTCGGCAGC
AATTACTGTCCGGCGGCTCCCAACAACATCTGGACGAACTCGTACATGTC
CTACCTCGAACGCACGTCCCAGGTGCTGGCCAACGCCGCCCGAATGGACC
CCGCGGCTTTTCAGCGCATTTATAACGGCAACAACAGAGACACTTACAAG
TGCACCACGCGGGCCTTGCCCCCTCTGCGGTATAGCGCCAATGCCCAGCA
GGCCGCGGTGAAGGCGAGTCAGATTTTGGCTGACCCTAACTGCCCCTTCC
AGCACGACACTTGCCGCAGCTATTGTGGCTTATATGGCGGATCATGCAGC
TGGGACGCTCGTATTGGGACGTATGAACCAGAGTGGCGGgtaagtttgag
aggaggagggagatggtatgagggagggaaagaggaaaagaggaagggag
cgagggaggaagggagggagggagggagggaggaagaaagggagggaggg
agggagggaaaagggtgagtgttggtttcagcttgtgcgcctcaactcta
catatgtcatgatttatagttttcttcgttccctcaagacagaggcacat
gggagggatagaggagaagagaacattccccctacatatcaaacatgccc
acttaccctcccctcacaccctccctccctccctctctccttccctcccc
tccaccccaaagGGCATGGGCGAAAACATCGCCATGACTACCAATGCGGG
TCAGAAGGAACCCACCACCGCCGTCCTCCAATGGCTGGCCTCTGCTCCCC
ACTGCGCCAACATCTACTCCACTTCCTTCACCCATATCGGCGTGGGTGGT
TGGGGCCGGTACTGGACGCAAAACTTTCTCCGAATGCCCAGCTCGACCGA
CAACCCCCTCTACGACGGCACGCACTACTCCCACAGCACTCACACCGATG
GCAAGCTCCGGTTCCTCGTGTCGTTCAAGAGCTCTGCCGCCCCGCAATCG
ATGAAGGTGGTAGTCAATGGAGTCGAACGACCCATGTCCCTCCACCTCGG
CCGGGCTACCCAAGGCCTCTACAGTTTCGAACAAGCCAACCCTGGCACTA
CCGTAGGCTGCCTTTCCTACCGCTTTTTTGTTCGCACCTCCACCGGCAGT
ACCTACCGCATGCCCGAAACCGGTGATTTCCAAACTGCCACCGTCGGCAG
CTGTACCTCGAACTGGGTATTCGGCAGCAATACTGGTAGTGGCACAGCTC
CTGCTCCTTCGCCTTCTACCGGTGCTGCTCCTAACAAACCCCCCTCTCGC
CTCCCTACTAAACAGCCCACCCGTGCACCGACGCGTGGGCGCAGACCCAC
CCGTGCCCCCACCCGCATACCCACACGACGTCCTGCTAATCGCCCTCCTT
CCAGTCCTACCAATACTAATCCTTCCATCCCCGTTCCTCCTCGCCCCTCT
CGTCCGACGGAAGGGTGGGGATGGCCCCCCAAGGCGACGGCTGAGGAGAA
AAAGAAAATGAAGTCTTGGCCGTCCATGACAGAGGGTAATAAAATGGAAG
GGAAAGAGGGCGAGTGGTAAAAGAAGGAGAATGAGGATGGACGCATGGGT
ATTGATCAGATAGGACGCATGGGTATTGAAAAAATGCAGAAGAAGAGGAT
AGAAGAAAGGGAAAGAGGAGGTTAGAGACAACGGAGTATATTTGTTCCGA
ACGGAAGCAGTAATAACACAGGGAATAAAAGCTCGAGATGGCAGGGAGAA
ATCAGAGACATTGCAATATAAGCTTACGCATGCATATGAGAGAAAATAAT
ATACAAAAATATGTGATTTATATTGTCTTGTCTTATCATCCGACAAGAAG
AGGATGGAAGAGAAGCTCCGATGTTTACATTCGGGACAGACGCATGAAGC
AAGGAGAGCCAAGCAGTGAGGACCTTACACACACCCACACGCACACACAC
ATATTCACACTCACACGCACGGTGGCGCCAGCGTGTGGGAAGAAAGAACG
AAGAAAAAACGACAAAACGAGAGTGAGGGGCAAAAGCAAAAGGACAAAGA
AAATGGACAATCATAAAGACAAATAATTAGGGCAGCAGCCGCGGCAACAT
CAACAACAATAATAGAAGAACAGCGCAAAGATAAAATAGGCCGATAAGAA
TAATTCAGTCCAAGAATAAAGGGAAAACGAGGAAAGGAGAGCTTAAGGCA
AAAAGGAAGGACAAAGAAAACGGACAATGATAAAGACAAATAGTCAGGGC
AGCGGCCGCAGCAACATCAACAACAATAATGATAAGAGCACCAAGAGAGA
ACAGGCCGACAAGGTGAGTATATACCCGTCTTTTAAAGCAAGAAAACCAA
TTTCTGTGTGCCAGGGCGGCGGAGGGCTGAAGAGTTGAAGAAATGTGGGG
AGGTGTGAGCAAATACAATGAAAGTAATATCAAATACATCGCATATTGAT
CT
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protein sequence of NO19G00170.1

>NO19G00170.1-protein ID=NO19G00170.1-protein|Name=NO19G00170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=546bp
MKITHSSWALFVAMAAIVVHGQEGPQHFLRATGRRLTTTTTTTTASEATP
PLPSFVKRALQSIFTFSALFNDTIETTTPTDPPLVTYQGAGTGAWGVQAN
RTFPAEQNGSSMQEQDVVMPRGGTGATSPKGYSLVEDRPRCYFTLGSNYC
PAAPNNIWTNSYMSYLERTSQVLANAARMDPAAFQRIYNGNNRDTYKCTT
RALPPLRYSANAQQAAVKASQILADPNCPFQHDTCRSYCGLYGGSCSWDA
RIGTYEPEWRGMGENIAMTTNAGQKEPTTAVLQWLASAPHCANIYSTSFT
HIGVGGWGRYWTQNFLRMPSSTDNPLYDGTHYSHSTHTDGKLRFLVSFKS
SAAPQSMKVVVNGVERPMSLHLGRATQGLYSFEQANPGTTVGCLSYRFFV
RTSTGSTYRMPETGDFQTATVGSCTSNWVFGSNTGSGTAPAPSPSTGAAP
NKPPSRLPTKQPTRAPTRGRRPTRAPTRIPTRRPANRPPSSPTNTNPSIP
VPPRPSRPTEGWGWPPKATAEEKKKMKSWPSMTEGNKMEGKEGEW*
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Synonyms
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