NO19G00160, NO19G00160 (gene) Nannochloropsis oceanica

Overview
NameNO19G00160
Unique NameNO19G00160
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3423
Alignment locationchr19:50705..54127 +

Link to JBrowse

Properties
Property NameValue
DescriptionCarboxyl-terminal protease
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:50705..54127 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008236serine-type peptidase activity
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0019538protein metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029045ClpP/crotonase-like_dom
IPR036034PDZ_sf
IPR001478PDZ
IPR005151Tail-specific_protease
Homology
BLAST of NO19G00160 vs. NCBI_GenBank
Match: XP_005855397.1 (carboxyl-terminal protease [Nannochloropsis gaditana CCMP526] >EKU20960.1 carboxyl-terminal protease [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 443.0 bits (1138), Expect = 2.000e-120
Identity = 229/301 (76.08%), Postives = 250/301 (83.06%), Query Frame = 0
Query:  394 RIGDRVSKVGHIMTKNTAGWDRDGTLENTLLQGKEGTSIQVELMRVVSEGEKE-------GREQRVPLTLRRRSFASSKYPAMRVQSLLDEEGRRVCYIRLHRFDAPATAQLRSVLYAEERVGAEAYVIDLRNNMGGIFQESLKMAALFLPDPKSVLCFTMDAWGGYSAHLAEEYDTSTTLPLTASGSRASARAAALLLARGEFGDKWAPLVSPKKPVVVLVNKGSASSSETFAAALHDNDRAWLVGERTFGKSLIQHLFPLPDGGALKLTVAEYLTPKQRHLARIRLPGPTRGRSVSATT 688
            RIGDR+S++GH+ T+N AGWDRDG LENTLLQG+EGTS+QVE++R + EG +E        RE RVPLTLRRRSFA+ KYPA+RVQSLLD EGRR+ YIRLHRFDA AT QLRSVL+AEERVGA  YVIDLRNNMGG+FQE LKMA LFLPDPK+VLCFTMDAWGGYS HLAEEYDTST LP+T S  R  A     LL  G  G +W PLV+  KPV VLVNKGSASSSETFAAALHDN RAWLVGERTFGKSLIQHLF LPDGG LKLTVAEYLTP QRHLARIRLPGPTRGRSV + T
Sbjct:   48 RIGDRLSRIGHVRTEN-AGWDRDGALENTLLQGREGTSVQVEVLRSLEEGGREEGKGGPGRREVRVPLTLRRRSFAAHKYPALRVQSLLDAEGRRISYIRLHRFDAQATDQLRSVLFAEERVGAAGYVIDLRNNMGGVFQEGLKMATLFLPDPKAVLCFTMDAWGGYSPHLAEEYDTSTALPVTGS-DRGGAHPGIGLL--GASGKEWRPLVARTKPVAVLVNKGSASSSETFAAALHDNGRAWLVGERTFGKSLIQHLFSLPDGGVLKLTVAEYLTPHQRHLARIRLPGPTRGRSVLSRT 344          
BLAST of NO19G00160 vs. NCBI_GenBank
Match: EWM23496.1 (hypothetical protein Naga_100414g2 [Nannochloropsis gaditana])

HSP 1 Score: 218.4 bits (555), Expect = 7.800e-53
Identity = 151/351 (43.02%), Postives = 184/351 (52.42%), Query Frame = 0
Query:    1 MTKTRQWILSLLAHVLIILASTAAFSSILSRSP--PHRLPYLHAIKPSAPRRSTLPTQHLPSHDDTSSPSFRSYTVTPHSVSPLLLRL-RQATAPVILSLLSLLCG----------------SVXXXXXXXXXXXXXXXXXXXXXLLPSPLTVPRGSGQTYSQAMASTDPQHVKEINRRFARHVWATIGLSFYDKSGGGILGGRGGHDPAWERVWAAAEKRGEGXXXXXXXXKGFETVEGTREVIRFMVGELKDEYSAYMAPQEIGGLFRRYPSKAQPQLERPVIAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKADGSMSLSASVGMQLEPAAYCPPATMLQPHYNA 333
            M   R W+ SLL  +L +  + A      +R+P  P RL  L    P+ P     PT+ L      +S S +    T  S SPLL+ L  Q    + L L SL+C                                        LL SP    RGSGQTYSQAMAS D + + ++N+ FARHVWATIGLSFYDKSGGG+LGGRGGHDP WERVWAAA + GEG        +GF++VEGTREVIRFMV ELKDEYSAY+AP+E+ GL R  P ++  +L+R                                   KADG+ SL+ASVGMQLEPA YCPPAT L P Y+A
Sbjct:   16 MLLPRPWLRSLLVWILWVGTAAAFTRFDRARAPTFPRRLTTLRGFSPAPP-----PTRRL------ASESEQDPVQTSRSHSPLLIPLVFQTVNRLTLPLCSLVCSILPSSALALXXXXXXXXTGTATSSIYQESSSRGTDIDTTLLSSPRIAARGSGQTYSQAMASADARRIHDVNKAFARHVWATIGLSFYDKSGGGVLGGRGGHDPGWERVWAAANRLGEG---GAGGGRGFDSVEGTREVIRFMVRELKDEYSAYLAPREMRGLSRWSP-RSSYRLDR---------MSSPTASQTGTWGPRSAQTIRSSKEDKADGTSSLTASVGMQLEPAIYCPPATTLLPQYDA 342          
BLAST of NO19G00160 vs. NCBI_GenBank
Match: GAX12291.1 (hypothetical protein FisN_1Hh222 [Fistulifera solaris])

HSP 1 Score: 181.8 bits (460), Expect = 8.100e-42
Identity = 135/399 (33.83%), Postives = 195/399 (48.87%), Query Frame = 0
Query:  378 VVVGVLPNSPAEEAGIRIGDRVSKVGHIMTKNTAGWDRDGTLENTLLQGKEGTSIQVELMRVVSEGEKEGRE---------QRVPLTLRRRSFASSK-----------YPAMRVQSLLD-----EEGRRVCYIRLHRFDAPATAQLRSVLYAEERVGAEAYVIDLRNNMGGIFQESLKMAALFLPDPKSVLCFTMDAWGGYSAHLAEEY--------------DTSTTLP--------------LTASGSRASARAAALLLARGEF-GDKWAPLVSPKKPVVVLVNKGSASSSETFAAALHDNDR-AWLVGERTFGKSLIQHLFPLPDGGALKLTVAEYLTPKQRHLARIRLPGPTRGRSVSATTFNAGLEPDLAVADSTPRPNSMD-DSALTQALDLL 721
            VV  V+P+SPAE AG+ +GDR+  VG    +N    D+  + EN            + + + V  G ++GRE          ++P  L   +  S             +  +  +++ D     E    V YIRL RF   ATA     + + E+ GA +Y+IDLRNN GG+ QE++  A+  L DP +VLCFT+++ GG++ H  EEY                STTL               +  S   A A      L RG     + A      KP+V+L+N+G+ASS+E FA+AL DN R    +G RTFGK LIQH FP+PDGG L+LTVAEYLTP  +H+  +   G  R    S    + G+ PD+     +  P ++  D  +++ALD L
Sbjct:  266 VVTAVIPDSPAERAGLVVGDRIIAVGE--DRNLQSLDKFSSAENYF------GYPDLTVAKPVYAGIEDGREVVVAYRPIRLQIPTLLTADTIFSPTEERLIGGNAIVHYELLHRTIFDPFSITEPDNAVGYIRLTRFSKAATAGFVEAVESLEKEGASSYIIDLRNNYGGVIQEAMLTASSLLKDPHAVLCFTLNSRGGFTPHDVEEYVVDKRYPGYLLSSEPKSTTLDQVRRESPEMFDENGINWSPPSAYASLREQRLKRGILPASRTASFTKKSKPIVLLINEGTASSAEVFASALRDNGRTVATIGTRTFGKGLIQHTFPMPDGGGLRLTVAEYLTPALKHVTFV---GGARYDRSSGEFVSGGIRPDIYCGSRSGIPRNIGADFCVSEALDAL 653          
BLAST of NO19G00160 vs. NCBI_GenBank
Match: GAX21102.1 (hypothetical protein FisN_1Lh222 [Fistulifera solaris])

HSP 1 Score: 176.8 bits (447), Expect = 2.600e-40
Identity = 129/399 (32.33%), Postives = 194/399 (48.62%), Query Frame = 0
Query:  378 VVVGVLPNSPAEEAGIRIGDRVSKVGHIMTKNTAGWDRDGTLENTLLQGKEGTSIQVELMRVVSEGEKEGRE---------QRVPLTLRRRSFASSK-----------YPAMRVQSLLD-----EEGRRVCYIRLHRFDAPATAQLRSVLYAEERVGAEAYVIDLRNNMGGIFQESLKMAALFLPDPKSVLCFTMDAWGGYSAHLAEEYDTSTTLP--LTASGSRASARAAALLLARGEF---GDKWAP------------------------LVSPKKPVVVLVNKGSASSSETFAAALHDNDR-AWLVGERTFGKSLIQHLFPLPDGGALKLTVAEYLTPKQRHLARIRLPGPTRGRSVSATTFNAGLEPDLAVADSTPRPNSMD-DSALTQALDLL 721
            VV  V+P+SPAE AG+ +GDR+  VG    +N    ++  + EN            + + + V  G ++GRE          ++P  L   +  S             +  +  +++ D     ++   V YIRL RF   ATA     +   E+ GA +Y+IDLRNN GG+ QE++  A+  L D  +VLCFT+++ GG++ H  EEY      P  L +S  R++        +   F   G  W+P                             KP+V+L+N+G+ASS+E FA+AL DN R    +G RTFGK LIQH FP+PDGG L+LTVAEYLTP  +H+  +   G  R    S    + G+ PD+     +  P ++  D  +++ALD L
Sbjct:  256 VVTAVIPDSPAERAGLVVGDRIIAVGE--DRNLQSLEKFSSAENYF------GYPDLTVAKPVYAGIEDGREVVVAYRPIRLQIPTLLTADTIFSPTEERLIGGNAVVHYELLHRTIFDPFSITDQDNAVGYIRLTRFSKAATAGFVEAVEILEKEGASSYIIDLRNNYGGVIQEAMLTASSLLKDSHAVLCFTLNSRGGFTPHDVEEYVVDKRYPGYLLSSEPRSTTLDQVRRESPDMFDENGINWSPPSAYASLREQRLKRGILPASRTAIFTKKSKPIVLLINEGTASSAEVFASALRDNGRTVATIGTRTFGKGLIQHTFPMPDGGGLRLTVAEYLTPALKHVTFV---GAARYDKSSGEFVSGGIRPDIYCGSRSGIPRNIGADFCVSEALDAL 643          
BLAST of NO19G00160 vs. NCBI_GenBank
Match: XP_002183568.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44750.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 161.4 bits (407), Expect = 1.100e-35
Identity = 132/447 (29.53%), Postives = 202/447 (45.19%), Query Frame = 0
Query:  374 RPCAVVVGVLPNSPAEEAGIRIGDRVSKVGHIMTKNTAGWDRDGTLENTL----LQGKEGTSIQVELMRVVSEGEKE-------------GREQRVPLTLRRRSFASSKYPAMRVQSLLDEE--------GRRVCYIRLHRFDAPATAQLRSVLYAEERVGAEAYVIDLRNNMGGIFQESLKMAALFLPDPKSVLCFTMDAWGGYSAHLAEEYDTSTTLP-----------------------LTASGSRASARAAALLLARG-------------EFGDKW------APLVSPKKPVVVLVNKGSASSSETFAAALHDNDR-AWLVGERTFGK-------SLIQHLFPLPDGGALKLTVAEYLTPKQRHLARIRLPGPTRGRSVSATTFNAGLEPDLAVADSTPRPNSMD-DSALTQALDLL-------AKQPFPERGGGEGKEKG 738
            R   V+  + P+SPAE +G+ +GDR+  V      + +       L NT       G    ++   +  V + G +E                 + P + RR +  S     +  + L +E+           V YIRL RF   +TA     +   E+ GA +YV+DLRNN GG+ QE++  A+  L DP +VLC+TM++ GG++ H  EEY   T  P                       L++S + +   A A L  +G                ++W         +  +K + +LVN+G+ASS+E F AALHDN R   +VG +T+GK       SLIQH FPLPDG  L+LTVAE+LTP  RH+ ++   G  R    +     +G++PD+    +   P ++  D  ++ ALD L       A  P+P+      K  G
Sbjct:  279 RHLPVITALAPHSPAERSGLTVGDRIVAVAQDNFLSQSPEAIQARLTNTYNAENYLGHPDVTVAKPVYAVDNTGSRETIVAYRPMHVRLASVNAQEPFSPRRENTVSGGDAIVHYELLSNEQSTLFGKTTNSPVGYIRLTRFSKASTAGFLHAVEELEQAGATSYVLDLRNNYGGVIQEAMLTASTMLRDPHAVLCYTMNSRGGFTPHDVEEYVVDTRYPGYLLSKESTTVTYEQVKRENPAFLSSSMAWSPPSAYASLREQGVKRGIHRPTFVNDNHMNEWQISAAQLKQLRAQKNIALLVNEGTASSAEVFTAALHDNGRTVAVVGTKTYGKGISFTLFSLIQHTFPLPDGAGLRLTVAEFLTPALRHVTQV---GSARYDQQTGEWAGSGIQPDILCTSNQGIPGNIGADFCVSVALDALNEAQLVDAAWPYPQNNVAVVKRVG 722          
BLAST of NO19G00160 vs. NCBI_GenBank
Match: CEM39833.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 151.4 bits (381), Expect = 1.200e-32
Identity = 179/658 (27.20%), Postives = 256/658 (38.91%), Query Frame = 0
Query:  140 QTYSQAMASTDPQHVKEINRRFARHVWATIGLSFYDKSGGGILGGRGGHDPAWERVWAAAEKRGEGXXXXXXXXKGFETVEGTREVIRFMVGELKDEYSAYMAPQEIGGLFRRYPSKAQPQLERPVIAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKADGSMSLSASVGMQLEPAAYCPPATMLQPHYNAATNMYDYPSLXXXXXXXXXXXXXXXXWLPAFFQPSFPPSYSRPCAVVVGVLPNSPAEEAGIRIGDRVSKVGHIMTKNTAGWDRDGTLENTLLQGKEGTSIQVELMRVVSE------------------GEKEGREQ------RVPLTLRRRS-----FASSKYPAMRVQS--------LLDE-------EGRRVCYIRLHRFDAPATAQLRSVLYAEE--------RVGAE-------------AYVIDLRNNMGGIFQESLKMAALFLPDPKS-------------------------------------VLCFTMDAW-----GGY-SAHLAEEYDTSTTLPLTASGSRASARAAALLLARGEFGDKWA---------PLVSPKKPVVVLVNKGSASSSETFAAALHDNDRAWLVGERTFGKSLIQHLFPLPDGGALKLTVAEYLTPKQRHLARIRLPGPTRG 681
            + Y   + S DP+ V + N+     VW    L FYD +GG         +P+ ++ W  A  +               TV+GTR+ IR ++  L+D Y+ Y+ P  +  +  R PS +Q   +  +                  XXXXXXXXXXX    +        AS+G+Q+   +             A  N                              P          A +VGV P+SPAE  G+RIGD +  + +     +     D       L+G +G+ I++ + R  ++                  G ++G  +      +V + LRR +       +   P  R Q         LL         EG R+ Y+RLH F      +L  VL A E        R GA               Y+IDLRNN GG+FQE++ +A+LFL DP +                                     VL + + +W     G Y + H  +E+      P      R   R         E G   A                      N+G+AS++E FAAAL DN RA +VGERT+GKSLIQH FPLPDGGALKLT+AEYLTPK++H++  RL  P  G
Sbjct:  152 ELYKAVVDSGDPEMVFKANKAIVEQVWQIASLLFYDPTGG------EKFEPS-DKAWRQALNQYLYPTIPNSKADALTTVDGTRKAIRDLLSFLQDPYTEYIPPNRVEQVEGR-PSPSQTNFQNRI----------RTTSTDNGXXXXXXXXXXXATPPQXXXXXQQPASIGVQIALKSV------------AMGNK----------------------------GPVSTGRGKTTVAEIVGVYPSSPAESCGLRIGDCIVSIDNTDVPKSV----DEVYRR--LEGPQGSGIKLTIQRQPTQADMTEVDTDISLVMSGGAGARDGSYEPWNLPLKVDVDLRRDNGVLPPLVAEWVPLQRYQDEEKGSLKRLLGAWGAREPGEGERIAYLRLHYFSRSTFNKLLPVLDAFERGQAVVDGRTGASLSERQTSANSPPLGYIIDLRNNYGGVFQEAMLIASLFLDDPNAXXXXXXXXXXXXXXXXXXXAAVSTRMFGGGGRVTDVPVLYWMITSWPNRESGSYLTKHTVDEFHFDRRFPNEVGSIRNLRRPXXXXXXXXEDGTLPAAXXXXXXXXXXXXXXXXXXXXXNRGTASAAEIFAAALRDNGRAVVVGERTYGKSLIQHFFPLPDGGALKLTIAEYLTPKRQHVSPSRLGNPYGG 745          
BLAST of NO19G00160 vs. NCBI_GenBank
Match: XP_024384517.1 (uncharacterized protein LOC112286653 [Physcomitrella patens] >PNR48168.1 hypothetical protein PHYPA_012643 [Physcomitrella patens])

HSP 1 Score: 147.5 bits (371), Expect = 1.700e-31
Identity = 111/349 (31.81%), Postives = 168/349 (48.14%), Query Frame = 0
Query:  379 VVGVLPNSPAEEAGIRIGDRVSKVGHIMTKNTAGWDRDGTLENTLLQGKEGTSIQVELMRVVSEGEKEGREQRVPLTLRRRSFASSKYPAMRVQSLLDEEGRRVCYIRLHRFDAPATAQLRSVLYAEERVGAEAYVIDLRNNMGGIFQESLKMAALFLPDPKSVLCFTMDAWGGYSAHLAEEYDTSTTLPLTASGSRASARAAALLLARGEFGDKWAPLVSPKKPVVVLVNKGSASSSETFAAALHDNDRAWLVGERTFGKSLIQHLFPLPDGGALKLTVAEYLTPKQRHLARIRLPGPTRGRSVSATTFNAGLEPDLAVADSTPRPNSMDDSALTQALDLLAKQPFPE 728
            +V     SPAEEAGI  G+++  V ++  ++ +   RD  +   LL+G  G+ +++ +      GE    E R  L  RR    +   P ++ + L    GR V Y+RLH F    T ++ S +   E +G + Y++DLRNN GG+F+E++ MAAL+L D K   C   +      A + +   T   LP         A   A                    P+ V+ N+ SAS+SE    ALHDN R   VGERTFGK ++Q+ FP+ DG  LKLTVA+YLTP    +++                   G+EPD A  D     +S+ D+ + +AL +L  +  P+
Sbjct:  413 IVAPFAGSPAEEAGILGGEKLVAVDNMRMESVS---RDEAV--ALLRGPIGSMVELSI-----AGEDPKVEPRTLLIERR----TLPLPPLQSRMLDAGNGRLVAYMRLHYFTHEGTKKMASAIREGEALGVDGYILDLRNNPGGVFEEAVAMAALWL-DCKG--CNVTETVRSNEADIEDLVYTVGNLPKDVFLKHPGALTHA--------------------PLTVITNRDSASASEVLTGALHDNHRVMTVGERTFGKGVVQYYFPMDDGSGLKLTVAKYLTPDHYDISK-----------------RGGIEPDKACHDYPHGKDSL-DTCIEEALKMLVVKEAPD 706          
BLAST of NO19G00160 vs. NCBI_GenBank
Match: GAQ84126.1 (Peptidase S41 family protein [Klebsormidium nitens])

HSP 1 Score: 145.6 bits (366), Expect = 6.400e-31
Identity = 96/292 (32.88%), Postives = 151/292 (51.71%), Query Frame = 0
Query:  379 VVGVLPNSPAEEAGIRIGDRVSKVGHIMTKNTAGWDRDGTLENTLLQGKEGTSIQVELMRVVSEGEKEGREQRVPLTLRRRSFASSKYPAMRVQSLLDEEGRRVCYIRLHRFDAPATAQLRSVLYAEERVGAEAYVIDLRNNMGGIFQESLKMAALFLPDPKSVLCFTMDAWGGYSAHLAEEYDTSTTLPLTASGSRASARAAALLLARGEFGDKWAPLVSPKKPVVVLVNKGSASSSETFAAALHDNDRAWLVGERTFGKSLIQHLFPLPDGGALKLTVAEYLTPKQRHLA 671
            +V    +SPAEEAGIR G+ +  +  +  +      RD     TL++G  G+ +Q++++ +       G+E++V  T+ RR+      P M+  ++    G+   YIRLH F +  T  +++ +   E +G + Y++DLRNN GG+F+E++  AAL+L      +  T++   G       +  +    P                           P    + P+VVL N+GSAS+SE  A AL DN RA  VGER+FGK +IQ+ FP+ DG  LKLTVA+YLTP +  +A
Sbjct:  292 IVAPFASSPAEEAGIRPGESLVAIDGLPCEQLT---RDEAA--TLMRGPVGSPVQLDVVSLA------GQERQV--TIERRTLPR---PPMKHFNVSGPGGQLFSYIRLHYFSSDGTRMVQAAIKEGEALGVDGYILDLRNNPGGVFEEAVACAALWLDCGSCQVVTTVNTNAGDDVIYQADNLSKNVFPA-------------------------HPGNLTRAPLVVLANRGSASASEVLAGALRDNSRAVYVGERSFGKGVIQYYFPMTDGSGLKLTVAKYLTPAKYDIA 542          
BLAST of NO19G00160 vs. NCBI_GenBank
Match: XP_002288333.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93769.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 144.8 bits (364), Expect = 1.100e-30
Identity = 98/292 (33.56%), Postives = 144/292 (49.32%), Query Frame = 0
Query:  482 VCYIRLHRFDAPATAQLRSVLYAEERVGAEAYVIDLRNNMGGIFQESLKMAALFLPDPKSVLCFTMDAWGGYSAHLAEEYDTSTTLP---LTA-----------------------SGSRASARAAALLLARG------EFGDKW--------------------APLVSPKKPVVVLVNKGSASSSETFAAALHDNDR-AWLVGERTFGKSLIQHLFPLPDGGALKLTVAEYLTPKQRHLARIRLPGPTRGRSVSATTFNAGLEPDLAVADSTPRPNSMDDSALTQALDLL 721
            V YIRL RF   +TA   + + + E  GA +Y++D+RNN GG+ QE++  A+  L DP  VLC+T+++ GG+     +EY T    P   L++                       SG  + A    L + RG         D++                    A   S +K +VVL+N+G+AS++E FA++L DN R   LVG ++FGK LIQH FP+PDGG L+LTVAEYLTP  +H+ +I                ++G++PD+     T   N   D  +  ALD L
Sbjct:  402 VGYIRLTRFSKSSTAGYINAINSLEAAGANSYILDVRNNYGGVIQEAMLTASTLLRDPHQVLCYTLNSRGGFRPQENQEYITDKAYPGYFLSSEPRTVSIDQVRREHPEYLEDNGWSGPTSYASLRELKMTRGIRMAHVPRSDRYDSASEDMKHSKEVDFAKLSEAISQSSQKKIVVLINEGTASAAEVFASSLRDNGRTVALVGTKSFGKGLIQHTFPMPDGGGLRLTVAEYLTPSLQHVTKI-----------GGAKRDSGIKPDIRCESKTIPKNVGADLCVGVALDAL 682          
BLAST of NO19G00160 vs. NCBI_GenBank
Match: XP_013895826.1 (carboxyl-terminal processing protease [Monoraphidium neglectum] >KIY96806.1 carboxyl-terminal processing protease [Monoraphidium neglectum])

HSP 1 Score: 143.7 bits (361), Expect = 2.400e-30
Identity = 112/317 (35.33%), Postives = 155/317 (48.90%), Query Frame = 0
Query:  422 TLLQGKEGTSIQVELMRVVSEGEKEGREQRVPLTLRRRSFASSKYPAMRVQSLLDEEGRRVCYIRLHRFDAPATAQLRSVLYAEERVGAEAYVIDLRNNMGGIFQESLKMAALFLPDPKSVLCFTMDAWGGYSAHLAEEYDTSTTLPLTASGSRASARAAALL--LARGEFGDKWAPLVSPKKPVVVLVNKGSASSSETFAAALHDNDRAWLVGERTFGKSLIQHLFPL-PDGGALKLTVAEYLTPKQRHLARIRLPGPTRGRSVSATTFNAGLEPDLAVAD-----STPRPNSMDDSALTQALDLLAKQPFPERGG 731
            TLL+G  G+ + + L        +      + LTL RR       P +    L   +GR V Y+RLH FD+ AT +LR ++   E      +V+DLRNN GG+F+E++ MA+LFLP P               A +AE     +   + A   RA A +  +    +RGE        +   +P  VLVN  SAS+SE FA ALHDN RA L+GERTFGK L+Q+ FP+  DGG LKLTV++YLTP +  +                 +   GL PD+A  D      TP       +A  Q +D  A +   +RGG
Sbjct:   31 TLLRGPAGSLVDLTL------APRSPGAPPLALTLERRPLPQ---PPIVDTRLPLPDGRAVSYVRLHYFDSAATRRLRELVSQGEADDVAGFVLDLRNNAGGVFEEAVAMASLFLPPP---------------ADIAETVRGGSPQVIDAVW-RAGALSPEIFPEASRGE--------ILSLRPAAVLVNASSASASEVFAGALHDNRRAVLIGERTFGKGLVQYFFPIGDDGGGLKLTVSKYLTPSRYDI-----------------SLQGGLPPDVACRDYPHGVFTPGDTDRCTAAALQFVD-AASRAANDRGG 296          
The following BLAST results are available for this feature:
BLAST of NO19G00160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855397.12.000e-12076.08carboxyl-terminal protease [Nannochloropsis gadita... [more]
EWM23496.17.800e-5343.02hypothetical protein Naga_100414g2 [Nannochloropsi... [more]
GAX12291.18.100e-4233.83hypothetical protein FisN_1Hh222 [Fistulifera sola... [more]
GAX21102.12.600e-4032.33hypothetical protein FisN_1Lh222 [Fistulifera sola... [more]
XP_002183568.11.100e-3529.53predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CEM39833.11.200e-3227.20unnamed protein product [Vitrella brassicaformis C... [more]
XP_024384517.11.700e-3131.81uncharacterized protein LOC112286653 [Physcomitrel... [more]
GAQ84126.16.400e-3132.88Peptidase S41 family protein [Klebsormidium nitens... [more]
XP_002288333.11.100e-3033.56predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_013895826.12.400e-3035.33carboxyl-terminal processing protease [Monoraphidi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL015nonsL015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR055ncniR055Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007692NSK007692Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G00160.1NO19G00160.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|607187gene_9775Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100414g2gene6956Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G00160.1NO19G00160.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G00160 ID=NO19G00160|Name=NO19G00160|organism=Nannochloropsis oceanica|type=gene|length=3423bp
ATGATACAGGGACGCGGCGCACCATTTTGGTCTGAGTGGGAGAAAGGAGG
GGAGGAAGGGTACCTTGAGGAACAAGGGCAACATGGAAGAAAAGGAAAAC
ACGTAAATTGAAAACACGCCGCGCATGAGCAGGTCAAATAGACACGTGCA
GACTCCATGTACACACGTCTTTACGCTGCGCTTCTCACAATCACACGAAA
AGACACATTCGCTAGACGCGTTGCCTTGCTGCTTTCTAGAAATTCTAAGG
GATGACAACAATTTCTTGTTGGAAGGCTCCCCCTCGTATGCAAGTCCTCG
AGGACGTCAGGTTGCATGCGATAGTTCTAGAGGGATGTAGGAACGACCAA
AAAGAACTAAGCGACTTTGAAGCAAAACAAAACAAAACAAACAAAACAAA
AACAAGCAAGCAAGCAAGAAGCAAGAAGCAAGAAGAAGCCAGAAGCCAGA
CAAGCCAGACAGCTGCCTCGTAACCGACTCACATCAACTGTCCCCTGCAA
TGTCTTTCGTGCCTTCCCCGCTCTACCCATCTCACGTACCGGCGCCACCA
CACACAGAGGCTGATAATATACGCCCAAAACCTGCGACATAGAGAGCGGC
ACCCGAACTGCTGCAAGCGCGGCGTTAAAGTCCATCGATCTAAACACGAG
AGTAATAACGAGCGAGCGCGGATGAAGTGAGGCACGCAACAGGAACAGGA
ACACAAGACCGAAACCCAACAGCAGCACCATGACCAAGACCCGCCAATGG
ATCCTCTCACTCCTTGCTCACGTCCTTATCATACTCGCTAGCACGGCTGC
TTTCTCCTCCATCCTCTCCCGATCGCCGCCCCATAGGCTCCCCTATCTTC
ATGCAATCAAGCCAAGTGCGCCCCGTCGCTCTACGCTTCCGACCCAACAT
CTTCCGAGCCATGACGACACTTCCTCGCCCTCTTTCCGCTCTTACACCGT
CACTCCGCATTCCGTCTCCCCCTTGCTTCTTCGCCTCCGCCAAGCCACCG
CACCCGTCATCCTCTCCCTCCTTAGCCTCCTTTGCGGCAGTGTCGGCATT
GCTTCCTTCTCCCCCTCTGCTCCCGCCTCCGCCGCCACCACCTCTACAAG
CACCACCCTCCTTCCTTCTCCGCTCACCGTTCCTCGGGGAAGCGGTCAGA
CTTACTCTCAAGCGATGGCCTCGACGGACCCCCAGCATGTCAAGGAGATC
AACCGCCGCTTTGCCCGGCACGTGTGGGCGACGATTGGCCTGTCCTTCTA
CGATAAAAGTGGAGGGGGGATTTTAGGGGGCCGAGGAGGACATGACCCGG
CCTGGGAGCGAGTCTGGGCCGCGGCCGAGAAGAGAGGAGAGGGAGGTGTC
GGAGGAGGAGGAGGAAGCAAAGGATTTGAAACCGTGGAGGGGACGAGAGA
GGTGATTCGGTTCATGGTGGGGGAGTTGAAGGATGAGTATTCGGCATACA
TGGCACCACAGGAGATCGGCGGACTTTTTCGTCGGTACCCGTCCAAGGCC
CAACCGCAATTGGAACGGCCGGTGATTGCCCCGACGTCTTCCTCGTCTAC
AAGCACCATCACGGCGGCAACGACGACAACGACGAAACAAGGCAGCAGCA
GTAGCGGCAACACCAAAGACGACAAGGCTGATGGAAGTATGTCCCTCTCG
GCCTCAGTAGGCATGCAGCTTGAGCCGGCCGCGTATTGCCCCCCTGCCAC
CATGCTTCAGCCCCATTACAACGCTGCAACCAATATGTACGACTACCCCT
CCCTCTCCCACTCCTCCTTCCCTTACCCCTCCTCCTCTTCCTCCGCTTTC
ACATGGCTCCCTGCCTTCTTCCAGCCCTCCTTTCCTCCTTCTTACTCTCG
GCCATGCGCTGTAGTCGTGGGGGTCTTGCCCAACTCTCCCGCGGAGGAAG
CAGGGATTCGAATCGGCGACCGTGTGAGCAAAGTGGGCCATATCATGACT
AAGAATACGGCGGGCTGGGACCGAGACGGCACATTAGAAAATACGCTATT
ACAAGGGAAGGAGGGAACGTCGATTCAAGTAGAGCTTATGCGGGTGGTGT
CGGAGGGAGAGAAGGAAGGGAGGGAACAGCGCGTGCCCTTGACATTGCGT
CGTCGGTCGTTTGCTTCAAGCAAGTACCCGGCAATGCGAGTTCAGTCTTT
GTTAGACGAAGAGGGTCGACGAGTCTGCTATATTCGCCTGCATCGCTTTG
ATGCCCCGGCCACAGCGCAGCTCCGTTCGGTTCTGTACGCAGAAGAGCGC
GTGGGCGCCGAGGCTTATGTGATCGATTTGCGGAATAACATGGGAGGGAT
CTTTCAAGAAAGTTTGAAGATGGCCGCCTTGTTTTTGCCGGACCCCAAAT
CTGTGCTGTGCTTTACGATGGATGCTTGGGGGGGTTATAGCGCGCATTTG
GCTGAGGAGTATGATACGTCCACCACCTTGCCCCTGACTGCGTCCGGCTC
TCGTGCGAGTGCTCGTGCCGCGGCCTTGCTGTTGGCTCGCGGTGAGTTTG
GCGATAAGTGGGCACCTTTGGTGTCCCCGAAGAAGCCTGTCGTAGTCCTA
GTGAACAAGGGCTCGGCGTCGTCCTCGGAAACTTTTGCGGCGGCGTTGCA
CGACAATGATCGGGCCTGGTTGGTTGGCGAACGGACATTTGGCAAGTCGC
TGATTCAGCACTTGTTTCCCTTGCCGGACGGGGGGGCATTAAAGTTAACA
GTGGCGGAATATCTTACTCCTAAACAGCGACACTTGGCCCGGATTCGCTT
GCCGGGACCCACACGAGGCCGCTCTGTGAGTGCTACGACTTTCAATGCAG
gtaagtgttgtagcggggcgcggaggaaaattataatgggattgagacac
accggaattataacacaaaggctcacatgcttctaacttttcatctacct
cctgttctaaccataagGTTTGGAGCCAGATTTAGCCGTGGCTGACTCCA
CCCCACGGCCAAACAGCATGGACGATTCTGCGCTTACTCAAGCCCTGGAC
CTGCTGGCTAAACAGCCCTTCCCGGAAAGAGGGGGGGGAGAGGGCAAGGA
GAAGGGGGAAGAAAGATTGTACAAGCGGATGTTTTCTTGTCATTCCTTTC
TCACTCGAAGAAAAAGTGAAGGGAAGAGGTGGAGGAGGTGGAGTCGTTCT
TATGTAAAATTCACCCTGTAAAATTATTTCTGTTCAATTCGATATTTTGC
CTTGTGCTAGTAACATTTCTGCATGCCGGGCTTGTAAAAAAAACATTGAT
CAATTTAGAAAATGTATGGAATGGCTGCCGTTCATGGCGCGCGGTTCTAT
AGAGGGCTGAGAAGGCGGGGCCTTTGGTTTTGCGGCAGCTGGGATTAGGT
AGCACATAAATTGAAAGGAGCACATTGAAACACCGATAAAGATATCGACA
AATCGTTATGCCAATTCATGAGT
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protein sequence of NO19G00160.1

>NO19G00160.1-protein ID=NO19G00160.1-protein|Name=NO19G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=775bp
MTKTRQWILSLLAHVLIILASTAAFSSILSRSPPHRLPYLHAIKPSAPRR
STLPTQHLPSHDDTSSPSFRSYTVTPHSVSPLLLRLRQATAPVILSLLSL
LCGSVGIASFSPSAPASAATTSTSTTLLPSPLTVPRGSGQTYSQAMASTD
PQHVKEINRRFARHVWATIGLSFYDKSGGGILGGRGGHDPAWERVWAAAE
KRGEGGVGGGGGSKGFETVEGTREVIRFMVGELKDEYSAYMAPQEIGGLF
RRYPSKAQPQLERPVIAPTSSSSTSTITAATTTTTKQGSSSSGNTKDDKA
DGSMSLSASVGMQLEPAAYCPPATMLQPHYNAATNMYDYPSLSHSSFPYP
SSSSSAFTWLPAFFQPSFPPSYSRPCAVVVGVLPNSPAEEAGIRIGDRVS
KVGHIMTKNTAGWDRDGTLENTLLQGKEGTSIQVELMRVVSEGEKEGREQ
RVPLTLRRRSFASSKYPAMRVQSLLDEEGRRVCYIRLHRFDAPATAQLRS
VLYAEERVGAEAYVIDLRNNMGGIFQESLKMAALFLPDPKSVLCFTMDAW
GGYSAHLAEEYDTSTTLPLTASGSRASARAAALLLARGEFGDKWAPLVSP
KKPVVVLVNKGSASSSETFAAALHDNDRAWLVGERTFGKSLIQHLFPLPD
GGALKLTVAEYLTPKQRHLARIRLPGPTRGRSVSATTFNAGLEPDLAVAD
STPRPNSMDDSALTQALDLLAKQPFPERGGGEGKEKGEERLYKRMFSCHS
FLTRRKSEGKRWRRWSRSYVKFTL*
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Synonyms
Publications