NO19G00150, NO19G00150 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO19G00150 vs. NCBI_GenBank
Match: EWM23499.1 (hypothetical protein Naga_100414g1 [Nannochloropsis gaditana]) HSP 1 Score: 211.5 bits (537), Expect = 9.200e-51 Identity = 103/123 (83.74%), Postives = 113/123 (91.87%), Query Frame = 0
Query: 59 SSSGSAGDGLTLAERKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVLPMLEEAAGIVARIRAELDKEEEGFKMRMVDGSAREFFFIVPYAPQECPDQFVTDLVHATFQDGRGYVEGLTQAR 182
S+ + G+ LTLAERKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVL +L+EAAGIVA+ RAELDKEEEGFKMRMVDGSAREFF VPYAPQ+ PD+FVTDLVHAT QDGRGYVEGLT++R
Sbjct: 31 SAPRNVGESLTLAERKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVLCLLDEAAGIVAKTRAELDKEEEGFKMRMVDGSAREFFHSVPYAPQDYPDRFVTDLVHATLQDGRGYVEGLTKSR 153
BLAST of NO19G00150 vs. NCBI_GenBank
Match: EWM23485.1 (Heat shock protein Hsp20 [Nannochloropsis gaditana]) HSP 1 Score: 198.0 bits (502), Expect = 1.100e-46 Identity = 151/203 (74.38%), Postives = 169/203 (83.25%), Query Frame = 0
Query: 546 ASARVLEELQGRCSTFVKGLMHGLNVLDEMHVEEKDRPLRKNQVLQIQQLIDDVENTKERLRSLRTELA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPSLPQLTSLLAPHWRKMKMRAVFESTATPHAYFLAASLPNMRLSDLSVTVGPGGQTLTIKGFRGPTQDEVGGLLRMALMAGGEGRGGE 744
+S RVLEELQGRC++FVKGLMHGL+VLDEMHV EKDRPLRK+QV+QIQQLIDDVE TKERLR LR ELA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PSL L SLLAPHWR+MKMR FES +TP AY LAA LPNM+L++LSVT+G G++L +KGFRGPTQ+EVG L+ A+ G G G E
Sbjct: 45 SSERVLEELQGRCASFVKGLMHGLDVLDEMHVTEKDRPLRKSQVMQIQQLIDDVEQTKERLRGLRAELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTPSLAHLASLLAPHWRQMKMRPRFESGSTPQAYVLAARLPNMKLANLSVTLGARGESLIVKGFRGPTQEEVGSLVE-AVRRSGRGGGRE 246
BLAST of NO19G00150 vs. NCBI_GenBank
Match: XP_005855395.1 (hypothetical protein NGA_0025720 [Nannochloropsis gaditana CCMP526] >EKU20958.1 hypothetical protein NGA_0025720 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 117.9 bits (294), Expect = 1.400e-22 Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 0
Query: 59 SSSGSAGDGLTLAERKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVLPMLEEAAGIVARIRAELDKEEEG 131
S+ + G+ LTLAERKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVL +L+EAAGIVA+ RAELDKE G
Sbjct: 31 SAPRNVGESLTLAERKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVLCLLDEAAGIVAKTRAELDKERSG 102
BLAST of NO19G00150 vs. NCBI_GenBank
Match: XP_009035181.1 (hypothetical protein AURANDRAFT_62710 [Aureococcus anophagefferens] >EGB10378.1 hypothetical protein AURANDRAFT_62710 [Aureococcus anophagefferens]) HSP 1 Score: 97.1 bits (240), Expect = 2.500e-16 Identity = 50/132 (37.88%), Postives = 73/132 (55.30%), Query Frame = 0
Query: 72 ERKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVLPMLEEAAGIVARIRAELDKEEEGFKMRMVDGSAREFFFIVPYAPQECPDQFVTDLVHATFQDGRGYVEGLTQARIDAYMHSFSQGRLPPPSMPSGG 204
ER A AI AY+ F+ + FRKGW PPF ++D P+ AA + A R+ D GF +R DG+AR++ P +P + P+ F+ L+HATFQD GYVEGL ++ + + ++PS G
Sbjct: 150 ERAQAAAIYDAYAGFFDHISFRKGWKRPPFPRRDADPLFRRAARVAAMARSR-DLRRAGFALRQPDGAARDWMHDAP-SPADSPNAFLRGLLHATFQDANGYVEGLDAVAVERFRRRYD-------AIPSAG 272
BLAST of NO19G00150 vs. NCBI_GenBank
Match: CUI15308.1 (Hypothetical protein, putative [Bodo saltans]) HSP 1 Score: 95.5 bits (236), Expect = 7.300e-16 Identity = 46/108 (42.59%), Postives = 63/108 (58.33%), Query Frame = 0
Query: 82 AYSDFWTQLRFRKGWAEPPFKKQDVLPMLEEAAGIVARIRAELDKEEEGFKMRMVDGSAREFFF---IVPYAPQECPDQFVTDLVHATFQDGRGYVEGLTQARIDAYM 187
AY F+ +RFR GWA PPF + V P+ EAA + RIR LD ++ K+R DG A+ F + Q +FV LVHATF+D GYVEGLT+ ++D ++
Sbjct: 111 AYMGFFEHIRFRNGWAIPPFSRDTVSPLFREAAAVTVRIRNFLDTQDSSTKLRKADGEAQTFLHTKEALEMVEQSSHRKFVIQLVHATFRDAVGYVEGLTKDKVDGFL 218
BLAST of NO19G00150 vs. NCBI_GenBank
Match: KNH03962.1 (BAG domain containing protein [Perkinsela sp. CCAP 1560/4] >KNH04202.1 BAG domain containing protein [Perkinsela sp. CCAP 1560/4]) HSP 1 Score: 90.9 bits (224), Expect = 1.800e-14 Identity = 47/134 (35.07%), Postives = 73/134 (54.48%), Query Frame = 0
Query: 63 SAGDGLTLAERKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVLPMLEEAAGIVARIRAELDKEEEGFKMRMVDGSAREFFFIVPYAPQECPDQFVTDLVHATFQDGRGYVEGLTQARIDAYMHSFSQGRLPP 197
S G T + + I+ AY +W +RFRKGWA+P F +DV ++ AA V +IR LDK G KMRM+DG+A+++ + + F+ D+VH++ +D GYVE L + +D ++ L P
Sbjct: 3 STGRHWTDDDERKKEKIIDAYRAYWEHIRFRKGWAKPAFLYEDVRIPMDIAAEYVVQIRKILDKRSPGMKMRMIDGNAQQYLQGITEKDTRV-ETFIRDIVHSSLKDATGYVERLDKKLVDNFLAQIEISELSP 135
BLAST of NO19G00150 vs. NCBI_GenBank
Match: OLQ07046.1 (hypothetical protein AK812_SmicGene9661 [Symbiodinium microadriaticum]) HSP 1 Score: 79.3 bits (194), Expect = 5.400e-11 Identity = 47/137 (34.31%), Postives = 73/137 (53.28%), Query Frame = 0
Query: 73 RKAARAIVAAYSDFWTQLRFRKGWAEPPFKKQDVLPMLEEAAGIVARIRAELDKEEEGFKMRMVDGSAREFFFIVPYAPQECPDQ------FVTDLVHATFQDGRGYVEGLTQARIDAYM--HSFSQGRLPPPSMPS 202
R ++ I YS F+ + RKGW PPFKK+DV +A +VA +R +D++ G +R ++GS+ ++ + ++P++ P Q F LV AT D G VEGL A +D Y+ H +G P P P+
Sbjct: 77 RDSSHEIFNGYSFFFEHIGIRKGWRTPPFKKEDVQAPFMASAEVVAVVRHRIDEQGNGMVLRQLEGSSHDWLW--GWSPEKPPHQAEFLPEFFRGLVFATLSDANGLVEGLDAATLDYYVQSHPILEG-CPAPVAPA 210
BLAST of NO19G00150 vs. NCBI_GenBank
Match: XP_004367756.1 (BAG domain containing protein [Acanthamoeba castellanii str. Neff] >ELR22675.1 BAG domain containing protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 77.0 bits (188), Expect = 2.700e-10 Identity = 48/138 (34.78%), Postives = 69/138 (50.00%), Query Frame = 0
Query: 68 LTLAERKAARAIVAAYSDFWTQLRFRKGWAEPPFK-KQDVLPMLEEAAGIVARIRAELDKEEEGFKM-----------------RMVDGSAREFFFIVPYAPQECPDQFVTDLVHATFQDGRGYV-EGLTQARIDAYM 187
LT R+ + AAY +FW Q +FRKGWA+P F + V +L AA V RIR+ D+ + R +G ARE+ + P+ P QFV ++VHAT + GY+ EGLT ++D Y+
Sbjct: 40 LTSDMRRQIYELKAAYEEFWQQRKFRKGWAKPLFAFDEAVEELLARAAEAVVRIRSHFDELNGSSTVPRGLSKSASSIATAKLPRFKEGRAREYLCSLEQDPRAAPQQFVREIVHATLSNEDGYLEEGLTGDKLDRYI 177 The following BLAST results are available for this feature:
BLAST of NO19G00150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00150 ID=NO19G00150|Name=NO19G00150|organism=Nannochloropsis oceanica|type=gene|length=7257bpback to top protein sequence of NO19G00150.2 >NO19G00150.2-protein ID=NO19G00150.2-protein|Name=NO19G00150.2|organism=Nannochloropsis oceanica|type=polypeptide|length=612bpback to top protein sequence of NO19G00150.1 >NO19G00150.1-protein ID=NO19G00150.1-protein|Name=NO19G00150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=744bpback to top Synonyms
Publications
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