NO18G02710, NO18G02710 (gene) Nannochloropsis oceanica

Overview
NameNO18G02710
Unique NameNO18G02710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4729
Alignment locationchr18:888835..893563 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:888835..893563 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO18G02710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL010nonsL010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G02710.1NO18G02710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G02710.1NO18G02710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G02710 ID=NO18G02710|Name=NO18G02710|organism=Nannochloropsis oceanica|type=gene|length=4729bp
CCCTGAAAAACACGATGCGGTGGAAAAAGGAGAGGACGGGGAGCAAAGAT
GTTTGAAATGGCAGAGAGACAGAGATCCATTCACATTAGAGTCAGCCACA
CACATGCACAGGGCTGGGCACAGCCTGAGGGAGGAGAAAGAAGAAGGAGG
TCAAGCAGGGACGACTTAAAAATGTGGCGGCACGGCCAGGTGTGGCTGCA
ACAGCTTCGCTGGGCGCAGCATGTACAGAGAGCAGGGGCGGGGAGAGAAC
AAGGGGGCGCCCTTCTTTTAGCCTGTCAACCAGgtaggtgcgatggtgtc
tgtgtgtctgtctcgtctgagtgaccatgggatcattgcatcgcttggtg
gggatggtaccgctttcagagagggccaccctttatgcatcacatcacac
agactcacgcacacaaccacacgtaacaacagGAGGCGGAGGGGGGGGTT
CTCTGAAGCTGTCGACGCTCTCTGGAAAGGACAAGGCGGACGCGAACCCG
GGGCGGGGACTGGAATTAAAAGAGTGGAATCTGTTTTTAACCCTCGTGGG
CGTCATGACGGGCACGATCGCCTTGGTATGGAAGGGCCTGGAGCGCTTTT
ACGAGGAGAAAGTTTCGCGTATCATTGGCGAGACAGAGGCAGCGCGTCTT
CAGGGAGAGGCCAAAATGGAGGCTTCGCTCCGTCAAGACATGGCAGAGCT
CGAGGCGGCACGCCGCCAAGACATAGCAGAGGGGAAGGCGGCACGTCTCC
AGGATAAGGTGGAATTTTACGAGTTTTACGCTAAGGCGCTTGGGACTCGG
GATTTTGAGCCCTTAAAGGAGGCCCTGGTCCGACGGCAAAAAGAGAAAGA
AGAAGGACAACAAGTGACGCCGACGGGTAAAAGTGGGGGAATAGAACACA
AATAGAGAAATAAGAAGACGCGTGGACGCGGGGAAGAAGAGGGAACGTCG
CCCTTTGGCCCATCGAGCAAGAGAGACATGTGTACAGACTTGAAAGACTA
ACAAAGAAGGGGAGAGTAGAGATAGGTACGGTAGTGGAGACACAGGAAGT
GGCGTGCATGTCAAGTGCACAGAATAAGAATGGAGGAGGGGGATAGGGTT
GTCTGTACATTACTACGGATGTACATGGTGCGGTAAGGGGAATGGGGGGA
AGGTGTGTTGTGTACAAAGTGGCTTCATCGTAGTAACTACGTTTTTCCGG
TGGTGAATTAAGGCAGACACGGTTTAACAAAAGAAAAGAAGAGACAATGT
GCAGCCAGACGTTGAGCCACGAGGCTGCGTAGAATGATGATGGAGGGAAA
TCGCTGGAAGAGGCATTTCTGCCCGCGGCTTTTCTCTTTCATTTATATGC
CTCGTGCGTTCAGTCCCGATGAGCTAGATGGACTTCAATTTTGTTTTGGG
TCCCGTGTGTGCGTGGACAGCAACTACCATCCAAGAGAAAACTCCCGCCT
TTTGGCGTGCTTCAAAGTGAATTCACTGTAGTCTCACCATATTTTAGGGC
CTTTTACTTACTTTCCTCTTACCTCCCCTAGCTCCTCTTCCTCCTCCTCT
TCCTTCTCCTTTCTCGTGTCTTCATCTTCCTCCTCATTGTTTCCCCCCCT
TAGTTCTTCTTCGTCTTCTTTGTCCTCTTCTTCCATGCCACTGCTCTCGC
TCCTTACCTCTCTCCCTCTCCGACTTCTCTCCTCCATCGTCGCGCGCATA
ATAGCCTCCATATCCAACCCTCCCGTCAACATTCCTTCCGGTCCTGCCTC
GCCGCCTAATCCGACACATCCGTGCAGATCAAGCGGCACGCGGCAACTGG
CCCAAGGGTCCGGAAGCACACGCACCTCCTCCCCATCCACCACTCGGACC
ACGATTCCCTCCCCCCCTTCGTCCTCGGCGCCGACCTCGGACTCGTCGTC
CGCGACCAAAGGCACTTCTAACCTGCCTCCCTCCCATGCTTTCGTCCCCC
CCCACGCAAATAGCAAGGCGTCGGTTGGTGGGCCCCAGGGGGCTAGATCC
AGCACCCAGATCCTACCCTGCCTGTCCACGTACACGTCCACGCACACAGT
CACACCCACCTGTTTTTCTCCCTCTTCCTCGAACAGTGATGGCAAGGAAG
TCGTTAGAATGGGCGTGATGTGAAGGAGGAAGAAGGTATGGAGGAGGGTG
CGGAGGCGCGGGATCTCGTCGGCGAGAAAGGGATAAAAAGCGGAAGGCTC
CCGCTGGCTGACGGCGCAAAGGACGGAGCGACGAACAAAGCAGCGAAAGT
GCATGGATGGGTGAAAATACGCCCATTTACGAAGGGTCAAAACGGGTTGG
AGGGCGGAAGAGAGGGCGGAGGATGGTGTGACGATTTGTTGCTGAGAATC
GGTGGTGATATGGGTTGGCGCAAGGGGACCAAAGTGAGAGTGAGCCAATG
ACGAGATACAAAGGAAACAAAGGATCTTCAATGAACCACAAGAGCCCCCT
CTCTCCTTCATTCCATTCTCCCGTGATCTTTCCTCTCTCTCCGTCTTTCT
CTTTACACCCCTCTTACCAGCTCTTCCAGGCGGTCCAGATCGTTCTGCAT
GCGGTCCGAGCTCTTGAGCAGGAGCATCACATCACCTGCCGTCTCGCATT
TTATTGTGCCGCCGTTAACCCTTTTGAAGAAACGAATAAGGGGGGAGAGA
AGCATAGAAGAGCGAGGAAAAGGCGTCGGTAAGGGCTGACGAGTACAAAC
CGAAGAAGAGATGGCCTCTTGTATATTCCTTCCTCCCGCCCCCCCGTATC
CCCTCTCTTTCACGTGCTAGCTCTTTCTCAAGGCACTCTTACTATTCTCT
CCTACCACAGACCCTCCCTCCCCACCCTCCCATCCCTCCTCCAACTTCCC
CCCCTTTTTACCAAGCTGCATCCCTGGGCACGCTCCAATTTAGCTTGGGC
ACGACGGCACCGCCCAGTTCCGCAATAGCCTCTGTCAGGGCTGCTTCAAA
GGCGGGGAAAGAGGACGAGGAATACGAAGAGCAGATACTCTCCTTCTCGA
CCCGTCTTTGCCATTCAATCTCCCAGTCGTCTTCACCGTCTTCATGCTGG
GTGCGCTCGTGGCCAGTACTGCTGAGCTCAACGGAGGGTGGAAGTATGAC
ACCGTCAGTTTGCAGCCATGAAAGAAATTCCGAGGATAATGTTATCGAGC
GCGACTTCAAAGTCCATTTCCGGAACAAAGGTGCCCACACGTGCACCTGG
CAGGCATGCAATGCTGCTACCAATCGGCGTGATGGTGGAGGGTCGGGGGA
GCAAGCGGTTTCGGATGGAGGCGATGCAGTCATGGGCGGAAGAAAGGGAA
AGGGAGGAGGCTAAAGGACACGTAGTCTGGTGGGCTGCGGATATGGCGTG
TAGCTTACACTGTGACGTGTCCTGTGTGGCCGTATTATGGTGTCTGTGTG
CTAGGGAGGAGTATGGGGAGTGGCAAGTTGCTTCGCCAGTTCATATTTCA
CGTCACTCTAATTTTACTAATGCTGCCGTCAAATTCACAGCCGTCAAGAT
CATACACCCCGCATACGCATGCAACCAACAGTAAGATAATGATAACAAGC
TGATCGCGGGGTCTGCCGCCACCTTTTACTCTCGTCTTGTGGATTTGTTT
GAGGACGTCAAGACCTGCCGATCAACCTCCCCACAGCTGCTCATGACTCT
TGCTTCCTTATCTCTCTCATCCATACCCCACACAACACAAACAGGACGGG
CGCACACAAACTTAGAGCATTGTCAAGCTTCGTATAGAGACAGAGAGCAT
CCGCCACCTCGCGTGGTCGCATCTTGTATCAGTTAGCCTCGCCGCTTAAA
GCCAAGCGAGCAACGCCATGCCGCACACCCCGAAGGCGCCGCCTCCTCCT
CCTCATTATGCTGAGGAGTCCTTCACAGCGCCTTCTCCTCCCCGCACCCT
TACGGCCAGCACTCCCAACATCAGCACCGCCACCTTGACTTACTCCCTGC
ATGTGCACGAGCTCTCCTTCTCCGCCGAGGAAGTGTTGATCAACCCCGAG
GTCTTTCCCACCCTCGTGCTCCACGACATACTGGAGATCGTGCCCCTCTC
ACACTCCCCTGTCTCCACGATGCCGTCGCAAGCTCTTCATGCTGTTTTGC
TTTCCACAGGAAAGGGTGCTGCTGGTGGTGGTGGTGGTGGTGACGCGGAA
GCAGGACAGCAGCGACAAGGATCCTCACCAAGGTCATCACAACGCGGGAG
CGGAGCAAGGATAGGAGGAGCACGGGGAGGAGAAAGGGGGAAACATGGAG
AAGGGAATGCCAGCACCACCAGATACAGTGGTCCAGCTCAACCTCGTTCT
CATGCCGTGTCTGGTGCTGCTCCTTCCTTCATTCCGGGTACGGCCTCGGG
CTCCTCGTCTGGTCCGGGCAGCGATAAGGGGGATGGGCGAAAGGGCGAAG
GGGGGAAGGAAGGAAAAAAGGACAAGAAGAGCAGCAACTATAGCAACAAC
AGTAGTTGCCGCAATAATGTTAAGTATGGCGTCGGGGAGGAGCGACAAGC
AGGACGGGCTATGACGACGATGGGCGAGAGCATCGAGGCGGCAGGAGCAG
AAGGGGCAGTGAAGGGAGGCCTTCTCACACAGCGAGGACTGAAGCCTCCT
TCTCCTTCCCCTCCTCCTTCTACTGATGCCTCGCATTCTGGTTTTTTGTA
TTCTGTCTCTTCATCTACGCCCGCTTCTATTTCAACCACTGGCAGCTGTA
GCCCAAGCAGCAGCAGCAGCAGCAGCAGC
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protein sequence of NO18G02710.1

>NO18G02710.1-protein ID=NO18G02710.1-protein|Name=NO18G02710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=236bp
MFEMAERQRSIHIRVSHTHAQGWAQPEGGERRRRSSRDDLKMWRHGQVWL
QQLRWAQHVQRAGAGREQGGALLLACQPGGGGGGSLKLSTLSGKDKADAN
PGRGLELKEWNLFLTLVGVMTGTIALVWKGLERFYEEKVSRIIGETEAAR
LQGEAKMEASLRQDMAELEAARRQDIAEGKAARLQDKVEFYEFYAKALGT
RDFEPLKEALVRRQKEKEEGQQVTPTGKSGGIEHK*
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Synonyms
Publications