NO18G02470, NO18G02470 (gene) Nannochloropsis oceanica

Overview
NameNO18G02470
Unique NameNO18G02470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3366
Alignment locationchr18:801100..804465 -

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Properties
Property NameValue
DescriptionFg-gap repeat domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:801100..804465 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013517FG-GAP
IPR013519Int_alpha_beta-p
Vocabulary: Cellular Component
TermDefinition
GO:0008305integrin complex
Vocabulary: Biological Process
TermDefinition
GO:0007155cell adhesion
Homology
BLAST of NO18G02470 vs. NCBI_GenBank
Match: EWM23456.1 (fg-gap repeat domain protein [Nannochloropsis gaditana])

HSP 1 Score: 956.8 bits (2472), Expect = 3.900e-275
Identity = 494/775 (63.74%), Postives = 584/775 (75.35%), Query Frame = 0
Query:    1 MDYLSGPRKGSGGAG-ANDLNSPGLVFRGRGGTPRAASDPNGFEVQVDLETPQTAAGMGGSNKVGPGRTSAGSGASAGVPYMHQQGM-------APPEWQTQTANEHNVVAPPRRGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSTLKSLLAGACLTCCFFGILFTVGFFDGNKTNSSAHVYGRPRSTSSVSSSSSPLSMTDLPVGSKRSLRGSVTNSVITSEGTRILQTAVDHHHSRVIFVPAREPFSRRNIHHFAKHGEAVGMGGHRNETDNVRAIHVDDMEEFVEERREYVRHPDDVLMRREDYVDHDVELDELLEEVKLPFPFISTGGSHKVVTAHGIDDHHDAEAHDYFGSSMTNMGKNAKTGLTTIAVGAPGALDTSGIVYFVEVNAEGEVEDYTYLTHEDFEEAVNEEMRGRRQ-GKNGGWGPNTALGWALENVGDLDGDGVNDLAVGALGYPGGSSKGAVFIFFLTEDHGIKSHTVITQDMGGFPHTLNEHWRFGSSLTRLGDLDGDGVTELAVGAMGMGKERGGVFILFLNKDGSVKNTQLISSLHGWDHKLSVQDQFGSAVRGIGDLDGDGIPDMVVSGDGFPSGEGFGAVWVLFLNIDGSVKYWRRLDEMDMALEAEALFGASIANMGDLNGDGLPELLVGAPGMHELSGEAYIISLNKDGKIQHFKALTEDDHELDELVNTNDEFGWSVASLGDLDGDGIPDLAVAAETSPSHTNVPSIHMIYLAPQDMG-----------AKEAAAQDPRRRLR 756
            MDYLSG RK SG  G AND+NS GLVFRGR  TPR  S+PNGF+ QVD+ET Q   GM  S+  G  R SAGSGASAG+PYM Q  M       A  +WQT T NE  VVAPPRRG+S                                G S  +SL  GACLTC   GIL TVGFF+  KTNS  +VY RPRS+S  S +       D+P+  KR+LRGSV N V+TSEG+RI+Q+ +DHHHSRVI +P+ EPF+RRN+HHFA+HG  +G   HRNET N RAIHVDDMEEFVE+RREYVRHP+DVL+R ED       L  +      P+PFI+ G  HK+  AHG+DDHHDA++HDYFGSSM NMG N  T LTT+AVGAPGALDTSG +YF++VN EG+VE+Y+YLTHEDF E V     G    GK   WGPN+ALGWALENVGDLDGDGVNDLAVGALGYP G+SKGAVFIFFLT +H IKS+ VIT+ +GGFPH LN+HWRFGSSL+RLGDLDGDGVTELAVGAMGMGKERGGVF+LF+NKDG+VKNT LI+SL GWDHKL VQDQFGSAVRG+GDLDGDG+PDMVVSGDGFP+GE +GAVWVLFLN+DGSVKYWRRLDE D  LE EALFGAS+A++GDL+GDG  ELL+GAPG+HEL GEA+I+SL+K+G+++H+K +T+ D +L+ ++++NDEFGWSV SLGDLDGDG+PDLAVAAETSP  TN PS++M++LA QD G            K AAAQ+ +RRLR
Sbjct:    1 MDYLSGSRKASGTTGDANDINSSGLVFRGR--TPRTPSNPNGFDAQVDIETQQPGIGMSNSSSHGVSRNSAGSGASAGLPYMQQHSMQHGSSSTAASQWQTNTQNERTVVAPPRRGTS--LSSSVSTYEDDKNKKFRSSFSSPASASLSQGQSAFRSLFIGACLTCGLLGILSTVGFFNRGKTNS--YVYTRPRSSSYASPAVLDPEDFDVPLPPKRALRGSVHNQVVTSEGSRIVQSHIDHHHSRVILIPSHEPFTRRNVHHFAQHGARLGTNTHRNETGNARAIHVDDMEEFVEDRREYVRHPNDVLLRDED-------LHAMEATAHFPYPFITNGDVHKIEVAHGVDDHHDADSHDYFGSSMVNMGYNPATKLTTLAVGAPGALDTSGAIYFMDVNREGDVENYSYLTHEDFVETVGGGTGGSVSFGK--AWGPNSALGWALENVGDLDGDGVNDLAVGALGYPAGNSKGAVFIFFLTAEHEIKSYKVITEGVGGFPHQLNQHWRFGSSLSRLGDLDGDGVTELAVGAMGMGKERGGVFVLFMNKDGTVKNTHLIASLRGWDHKLVVQDQFGSAVRGMGDLDGDGVPDMVVSGDGFPAGESYGAVWVLFLNVDGSVKYWRRLDEFDPLLEPEALFGASLASLGDLDGDGRQELLIGAPGLHELRGEAFIVSLDKEGRVRHYKTVTDSDSDLEAVISSNDEFGWSVTSLGDLDGDGVPDLAVAAETSPGETNHPSLYMLFLAKQDEGPGAAGAARAMEEKGAAAQETKRRLR 760          
BLAST of NO18G02470 vs. NCBI_GenBank
Match: EWM28646.1 (fg-gap repeat domain protein [Nannochloropsis gaditana])

HSP 1 Score: 514.2 bits (1323), Expect = 6.700e-142
Identity = 273/606 (45.05%), Postives = 392/606 (64.69%), Query Frame = 0
Query:  148 KSLLAGACLTCCFFGILFTVGFFDGNKTNSSAHVYGRPRSTSSVSSSSSPLSMTDLPVGSKRSLRGSVTNSVITSEGTRILQTAVDHHHSRVIFVPAREPFSRRNIHHFAKHGEAVGMGGHRNET---------------DNVRAIHVDDMEEFVEERREYVRHPDDVLMRREDYVDHDVELDELLEEVKLPFPFISTGGSHKVVTAHGIDDHHDAEAHDYFGSSMTNMGKNAKTGLTTIAVGAPGALDTSGIVYFVEVNAEGEVEDYTYLTHEDFEEAVNEEMRGRRQGKNGGWGPNTALGWALENVGDLDGDGVNDLAVGALGYPGGSSKGAVFIFFLTEDHGIKSHTVITQDMGGFPHTLNEHWRFGSSLTRLGDLDGDGVTELAVGAMGMGKERGGVFILFLNKDGSVKNTQLISSLHGWDHKLSVQDQFGSAVRGIGDLDGDGIPDMVVSGDGFPSGEGFGAVWVLFLNIDGSVKYWRRLDEMDMALEAEALFGASIANMGDLNGDGLPELLVGAPGMHELSGEAYIISLNKDGKIQHFKALTEDDHELDELVNTNDEFGWSVASLGDLDGDGIPDLAVAAETSPSHTNVPSIHMIYLAPQ 739
            K  L GA ++    GILF +GFFD N+  SS       R ++ V  +S   ++ D+   +  +   S+  S +T          VDHH  RV+ +P+ + FSRRN+HH+  H     + G ++                      +HV+D+ +  ++ +     PD      ED ++ +   D+L   V LP  + +TG      +  G+D +H+ + +DYFGSS+T++G    TGLTT+AVGAPGAL+ SG++YF+++  +G+V++YTYLT++D                   W  N ALGW +EN+GDLDGDGV+DLAVGA+GYP GSS+GAV+I F+T + GIKSH  IT    GF   L E+  FGSS+ R+GDLDGDGVTELAVGAMG+GK+RGG++IL++NKDG+VK +  ISSL+GWDHKL+V+DQFG AVR IGDLDGDGI ++ V GDGFPSGE +G+VW+L+L  +G VK WRR+DE+D  LE E+LFG SI  +GDL+GDG PEL+VGAPG +   G+A+I+SL  +  ++H+K+L ++   L + +   DEF WS+ ++GD++GDG+PDLA+ AETSP+  N  S+H+++L P+
Sbjct:   89 KRFLLGASVSLVLIGILFVIGFFD-NRAMSSPSTSTTHRRSAGVRPASLRGTVGDVGPAAGPAAAASLA-STLTGGVLFPRSEDVDHHKPRVMMIPSLKSFSRRNVHHYDTHDPNGRLSGGKSAVKPPAGXXXXXXXXXXXXXXXVHVEDV-DIDDDGKRRSASPD-----AEDILNIEHASDKL--AVVLPHEYETTGVVSHFHSITGVDSNHNFDVNDYFGSSVTSLGGTPGTGLTTLAVGAPGALENSGMIYFLDLEKDGKVKNYTYLTNKD-------------SSLGDHWTSNVALGWTVENIGDLDGDGVDDLAVGAIGYPVGSSQGAVYILFMTPERGIKSHQFITTGEAGFEPFLKENSCFGSSIARIGDLDGDGVTELAVGAMGLGKQRGGIYILYMNKDGTVKKSTQISSLYGWDHKLNVEDQFGHAVRAIGDLDGDGITELAVGGDGFPSGEFYGSVWILYLTKEGGVKQWRRIDELDGHLEPESLFGGSIDMLGDLDGDGFPELIVGAPGANGFKGDAFIVSLGANATVKHYKSLVDEVGVLSDSIKEEDEFAWSLCNIGDINGDGVPDLALGAETSPADKNFGSLHVVFLTPR 671          
BLAST of NO18G02470 vs. NCBI_GenBank
Match: WP_069124909.1 (hypothetical protein [Candidatus Thiodiazotropha endolucinida] >ODJ87342.1 FG-GAP repeat protein [Candidatus Thiodiazotropha endolucinida])

HSP 1 Score: 228.0 bits (580), Expect = 9.600e-56
Identity = 151/388 (38.92%), Postives = 218/388 (56.19%), Query Frame = 0
Query:  347 DAEAHDYFGSSMTNMGKNAKTGLTTIAVGAPGALD---TSGIVYFVEVNAEGEVEDYTYLTHEDFEEAVNEEMRGRRQGKNGGWGPNTALGWALENVGDLDGDGVNDLAVGA-LGYPGGSSKGAVFIFFLTEDHGIKSHTVITQDMGGFPHTLNEHWRFGSSLTRLGDLDGDGVTELAVGAM---GMGKERGGVFILFLNKDGSVKNTQLISSLHG-WDHKLSVQDQFGSAVRGIGDLDGDGIPDMVVSGDG-FPSGEGFGAVWVLFLNIDGSVKYWRRLDE----MDMALEAEALFGASIANMGDLNGDGLPELLVGAPGMHE---LSGEAYIISLNKDGKIQHFKALTEDDHELDELVNTNDEFGWSVASLGDLDGDGIPDLAVAA 719
            D +  D FG ++ N+G     G+T IAVGAP   D     G V+ + ++++G+V+     TH+   +   +          G        G A+  +GDL+GDG  D+AVGA L    G+ KGAV+I FL  D  + S   I+QD G F   L+E+ RF  +L  +GDL+ DGVT+LAVG       G +RG V+ILF+N DG+V+++Q ISS  G  D  L  +D FG+AV  IGDL+GDG+ D+ V   G    G   GAVW+LFLN DG+V   +R+ +     D  L     FG ++AN+GD+N DG  +L VGA    +     G  +++ L  DG++     +++ +   D  +++ D+FG +VA LGDLDGD I DLAV A
Sbjct:   52 DLDVEDQFGLALANIGDLEVDGVTDIAVGAPFDDDEGENRGAVWILFMDSDGKVD-----THQKISDGSGD--------FTGDLDDGDQFGRAIAPLGDLNGDGFLDIAVGAPLDDDAGTDKGAVWILFLNGDGTVLSEQKISQDEGDFEGDLDENDRFAHALASIGDLNNDGVTDLAVGVPYDDDGGTDRGAVWILFMNSDGTVQSSQKISSDEGNLDRDLDDEDHFGTAVTEIGDLNGDGVTDLAVGVTGDDDGGPERGAVWILFLNADGTVDSKKRISQNRASFDGQLSDNDRFGGALANLGDINSDGTDDLAVGAKQSDDGGAERGTVWVLFLEIDGEVISSSKISDTEGSFDGDLDSGDQFGAAVAQLGDLDGDDINDLAVGA 426          
BLAST of NO18G02470 vs. NCBI_GenBank
Match: KJS05253.1 (hypothetical protein VR77_09135, partial [Flavobacteriales bacterium BRH_c54])

HSP 1 Score: 225.3 bits (573), Expect = 6.200e-55
Identity = 148/402 (36.82%), Postives = 222/402 (55.22%), Query Frame = 0
Query:  333 SHKVVTAHGIDDHHDAEAHDYFGSSMTNMGKNAKTGLTTIAVGAPGALD---TSGIVYFVEVNAEGEVEDYTYLTHEDFEEAVNEEMRGRRQGKNGGWGPNTALGWALENVGDLDGDGVNDLAVGA-LGYPGGSSKGAVFIFFLTEDHGIKSHTVITQDMGGFPHTLNEHWRFGSSLTRLGDLDGDGVTELAVGAM---GMGKERGGVFILFLNKDGSVKNTQLISSLH-GWDHKLSVQDQFGSAVRGIGDLDGDGIPDMVVSGDGFPS-GEGFGAVWVLFLNIDGSVKYWRRLDE----MDMALEAEALFGASIANMGDLNGDGLPELLVGAPGMHEL---SGEAYIISLNKDGKIQHFKALTEDDHELDELVNTNDEFGWSVASLGDLDGDGIPDLAVAA 719
            SH  ++A       +  A D FG  +   G     G   + VGA  A D   T+G VY + +       + TY     F   +N+      +      G +   G+    +GDLDGDG+ND+AVGA L   GG+++GAV+I FL  D  IK +  I+   GGF  TL ++ +FGSSLT LGDLDGDG+T++AVGA      G  RG V+ILFL+ +G+VK+ Q IS    G+   L+  D+FG ++ GI D+DGDGI D++V      S G   GAVWVLFL+ +G+VK+ +++ +    + +  +   +FG SI ++GD++GDG+P++ VGA    ++   +G  YII+L   GK++  + ++      +  +   D FG S+    D + DGI DL V A
Sbjct:  376 SHNKISATDTILSAEIAAGDKFGIDIAYFGDRNNDGKLDLLVGAYQASDGTTTTGEVYVLHLEGAATYPNKTYHETVPFIIGINKHSAATGEPLETELGASDKYGFGTCAIGDLDGDGINDMAVGAFLDDDGGANRGAVYIQFLNADGSIKLYQKISDTQGGFTGTLADNCKFGSSLTNLGDLDGDGITDIAVGAYDDDDGGTTRGSVWILFLDTNGTVKSEQKISDTQGGFTGTLNNGDRFGISLSGINDIDGDGIQDLLVGARYDNSGGSNTGAVWVLFLDTNGTVKWHQKIAQGSGGLTVTFDLGDMFGTSITSIGDMDGDGVPDMAVGAYADDDVETNTGAVYIINLTDSGKVKSEQKISMASGNFNGFIEEADFFGASICGNYDFNQDGINDLLVGA 777          
BLAST of NO18G02470 vs. NCBI_GenBank
Match: EDY81761.1 (FG-GAP repeat domain protein [Verrucomicrobiae bacterium DG1235])

HSP 1 Score: 224.9 bits (572), Expect = 8.200e-55
Identity = 145/402 (36.07%), Postives = 226/402 (56.22%), Query Frame = 0
Query:  352 DYFGSSMTNMGKNAKTGLTTIAVGA---PGALDTSGIVYFVEVNAEGEVEDYTYLTHEDFEEAVNEEMRGRRQGKNGGWGPNTALGWALENVGDLDGDGVNDLAVGALG-YPGGSSKGAVFIFFLTEDHGIKSHTVITQDMGGFPHTLNEHWRFGSSLTRLGDLDGDGVTELAVGAM---GMGKERGGVFILFLNKDGSVKNTQLISSLH-GWDHKLSVQDQFGSAVRGIGDLDGDGIPDMVVSGD-GFPSGEGFGAVWVLFLNIDGSVKYWRRLDEMD-----MALEAEALFGASIANMGDLNGDGLPELLVGA---PGMHELSGEAYIISLNKDGKIQHFKALTEDDHELDELVNTNDEFGWSVASLGDLDGDGIPDLAVAAETSPSHTNVP-SIHMIYL 736
            D FG  + ++G     G+T +AVG     G  +T G V+ + +N +G V             A  +++   +    G    N   G AL  +GDL+GDG+ DLAVG  G   GG+ +GAV+I FL  D  + +H  I+Q  GGF   L    +FGS++  +GDLDGDGVT++AVG+      G  +G V+IL LN DG+VK+ Q ISSL  G++  L  +DQFGSA+  + DL+GDG+ +++VS      +GE FGA+W+L++N DG+VK   ++   +       + + +LFG  +  + DLNGDG PE++VG    PG   + G  + + LN +G +   + +T        ++   D FG SV+++ DL+GDG+P+ AV A ++    N   S+ +++L
Sbjct:  890 DLFGFEVDDLGDVNGDGVTDLAVGTFDDDGGFNT-GAVWILFMNEDGTV-------------AAEQKISDTQGEFTGDLNTNALFGSALCGIGDLNGDGIPDLAVGNYGDNDGGNDRGAVWILFLNSDGTVGNHQKISQTRGGFTAPLLNDDQFGSAVANIGDLDGDGVTDIAVGSWHDDDGGSNKGAVWILNLNADGTVKDYQKISSLSGGFNGALDNEDQFGSALARLDDLNGDGVDELIVSAAYDDDAGENFGALWILYMNPDGTVKDQSKISAFEGGFTGPLVGSNSLFGFGVDGVADLNGDGTPEIVVGVRGDPGGGHMRGAIWTLFLNPNGTVASEQKVTTSTGGFGGMLMDEDLFGTSVSTVSDLNGDGVPEYAVGASSADDGGNAKGSVWILFL 1277          
BLAST of NO18G02470 vs. NCBI_GenBank
Match: WP_083794438.1 (hypothetical protein [Verrucomicrobiae bacterium DG1235])

HSP 1 Score: 224.9 bits (572), Expect = 8.200e-55
Identity = 145/402 (36.07%), Postives = 226/402 (56.22%), Query Frame = 0
Query:  352 DYFGSSMTNMGKNAKTGLTTIAVGA---PGALDTSGIVYFVEVNAEGEVEDYTYLTHEDFEEAVNEEMRGRRQGKNGGWGPNTALGWALENVGDLDGDGVNDLAVGALG-YPGGSSKGAVFIFFLTEDHGIKSHTVITQDMGGFPHTLNEHWRFGSSLTRLGDLDGDGVTELAVGAM---GMGKERGGVFILFLNKDGSVKNTQLISSLH-GWDHKLSVQDQFGSAVRGIGDLDGDGIPDMVVSGD-GFPSGEGFGAVWVLFLNIDGSVKYWRRLDEMD-----MALEAEALFGASIANMGDLNGDGLPELLVGA---PGMHELSGEAYIISLNKDGKIQHFKALTEDDHELDELVNTNDEFGWSVASLGDLDGDGIPDLAVAAETSPSHTNVP-SIHMIYL 736
            D FG  + ++G     G+T +AVG     G  +T G V+ + +N +G V             A  +++   +    G    N   G AL  +GDL+GDG+ DLAVG  G   GG+ +GAV+I FL  D  + +H  I+Q  GGF   L    +FGS++  +GDLDGDGVT++AVG+      G  +G V+IL LN DG+VK+ Q ISSL  G++  L  +DQFGSA+  + DL+GDG+ +++VS      +GE FGA+W+L++N DG+VK   ++   +       + + +LFG  +  + DLNGDG PE++VG    PG   + G  + + LN +G +   + +T        ++   D FG SV+++ DL+GDG+P+ AV A ++    N   S+ +++L
Sbjct:  927 DLFGFEVDDLGDVNGDGVTDLAVGTFDDDGGFNT-GAVWILFMNEDGTV-------------AAEQKISDTQGEFTGDLNTNALFGSALCGIGDLNGDGIPDLAVGNYGDNDGGNDRGAVWILFLNSDGTVGNHQKISQTRGGFTAPLLNDDQFGSAVANIGDLDGDGVTDIAVGSWHDDDGGSNKGAVWILNLNADGTVKDYQKISSLSGGFNGALDNEDQFGSALARLDDLNGDGVDELIVSAAYDDDAGENFGALWILYMNPDGTVKDQSKISAFEGGFTGPLVGSNSLFGFGVDGVADLNGDGTPEIVVGVRGDPGGGHMRGAIWTLFLNPNGTVASEQKVTTSTGGFGGMLMDEDLFGTSVSTVSDLNGDGVPEYAVGASSADDGGNAKGSVWILFL 1314          
BLAST of NO18G02470 vs. NCBI_GenBank
Match: WP_108275525.1 (hypothetical protein [gamma proteobacterium symbiont of Ctena orbiculata] >PUB72255.1 hypothetical protein DBP03_17860 [gamma proteobacterium symbiont of Ctena orbiculata])

HSP 1 Score: 221.9 bits (564), Expect = 6.900e-54
Identity = 157/434 (36.18%), Postives = 236/434 (54.38%), Query Frame = 0
Query:  321 VKLPFPFIST-------------------GGSHKVVTAHGIDDHHDAEAHDYFGSSMTNMGKNAKTGLTTIAVGAPGALDTS---GIVYFVEVNAEGEVEDYTYLTHEDFEEAVNEEMRGRRQGKNGGWGPNTALGWALENVGDLDGDGVNDLAVGA-LGYPGGSSKGAVFIFFLTEDHGIKSHTVITQDMGGFPHTLNEHWRFGSSLTRLGDLDGDGVTELAVGAMG---MGKERGGVFILFLNKDGSVKNTQLISS-LHGWDHKLSVQDQFGSAVRGIGDLDGDGIPDMV--VSGDGFPSGEGFGAVWVLFLNIDGSVKYWRRLDE----MDMALEAEALFGASIANMGDLNGDGLPELLVGAPGMHELS---GEAYIISLNKDGKIQHFKALTEDDHELDELVNTNDEFGWSVASLGDLDGDGIPDLAVAA 719
            ++LPFP +S                      S + ++A   +   D +A D FGS++  +G     G+T +AVGAP   D+    G V+ + ++++GEV         D E+ ++ +      G +G        G A+  +GDL+ DG  D+AVGA L   GGS KGAV+I FL  + G++S   I+ D G FP  L+++ RFG +L  +GDL+GDGV +LAV A      G +RG V+ILF++ DG+V + Q ISS   G D     +D FGSA+  IGDLD DG+ D+   VSGD    G   G +W+LFLN DGSV   RR+ +     + +L     FG +++N+GD+N DG+ +L VGA    +     G  +I+ +  +G++     L++        +++ D FG ++A LGDLDGDGI D+AV A
Sbjct:    7 IRLPFPLLSALLLGSMLLASGCSISYSTEVDSEQKISASSGNLDGDLDAGDQFGSAIARIGDLEGDGVTDLAVGAPFDDDSGENRGAVWVLFMDSDGEV---------DSEQKISAD----AGGFDGALDDEDRFGSAIAPLGDLNNDGFLDIAVGAPLDDDGGSDKGAVWILFLNGEGGVESEQKISDDAGDFPGDLDDNDRFGHALAAIGDLNGDGVEDLAVAAPNDDDGGTDRGAVWILFMDSDGTVDSVQKISSDRGGLDRDPGDEDHFGSALTEIGDLDDDGVVDLAVGVSGDD-DGGSDRGGLWILFLNDDGSVDSMRRITQTRGGFEGSLGDNDQFGNAVSNLGDINDDGITDLAVGAKLSDDGGADRGAVWILFMEINGEVISSTRLSDTKGNFRGDLDSGDHFGSALAHLGDLDGDGIGDIAVGA 426          
BLAST of NO18G02470 vs. NCBI_GenBank
Match: PUB76542.1 (hypothetical protein DBO99_13890 [gamma proteobacterium symbiont of Ctena orbiculata])

HSP 1 Score: 221.9 bits (564), Expect = 6.900e-54
Identity = 157/434 (36.18%), Postives = 236/434 (54.38%), Query Frame = 0
Query:  321 VKLPFPFIST-------------------GGSHKVVTAHGIDDHHDAEAHDYFGSSMTNMGKNAKTGLTTIAVGAPGALDTS---GIVYFVEVNAEGEVEDYTYLTHEDFEEAVNEEMRGRRQGKNGGWGPNTALGWALENVGDLDGDGVNDLAVGA-LGYPGGSSKGAVFIFFLTEDHGIKSHTVITQDMGGFPHTLNEHWRFGSSLTRLGDLDGDGVTELAVGAMG---MGKERGGVFILFLNKDGSVKNTQLISS-LHGWDHKLSVQDQFGSAVRGIGDLDGDGIPDMV--VSGDGFPSGEGFGAVWVLFLNIDGSVKYWRRLDE----MDMALEAEALFGASIANMGDLNGDGLPELLVGAPGMHELS---GEAYIISLNKDGKIQHFKALTEDDHELDELVNTNDEFGWSVASLGDLDGDGIPDLAVAA 719
            ++LPFP +S                      S + ++A   +   D +A D FGS++  +G     G+T +AVGAP   D+    G V+ + ++++GEV         D E+ ++ +      G +G        G A+  +GDL+ DG  D+AVGA L   GGS KGAV+I FL  + G++S   I+ D G FP  L+++ RFG +L  +GDL+GDGV +LAV A      G +RG V+ILF++ DG+V + Q ISS   G D     +D FGSA+  IGDLD DG+ D+   VSGD    G   G +W+LFLN DGSV   RR+ +     + +L     FG +++N+GD+N DG+ +L VGA    +     G  +I+ +  +G++     L++        +++ D FG ++A LGDLDGDGI D+AV A
Sbjct:    9 IRLPFPLLSALLLGSMLLASGCSISYSTEVDSEQKISASSGNLDGDLDAGDQFGSAIARIGDLEGDGVTDLAVGAPFDDDSGENRGAVWVLFMDSDGEV---------DSEQKISAD----AGGFDGALDDEDRFGSAIAPLGDLNNDGFLDIAVGAPLDDDGGSDKGAVWILFLNGEGGVESEQKISDDAGDFPGDLDDNDRFGHALAAIGDLNGDGVEDLAVAAPNDDDGGTDRGAVWILFMDSDGTVDSVQKISSDRGGLDRDPGDEDHFGSALTEIGDLDDDGVVDLAVGVSGDD-DGGSDRGGLWILFLNDDGSVDSMRRITQTRGGFEGSLGDNDQFGNAVSNLGDINDDGITDLAVGAKLSDDGGADRGAVWILFMEINGEVISSTRLSDTKGNFRGDLDSGDHFGSALAHLGDLDGDGIGDIAVGA 428          
BLAST of NO18G02470 vs. NCBI_GenBank
Match: PCH69432.1 (hypothetical protein COC01_01400 [Bacteroidetes bacterium])

HSP 1 Score: 220.3 bits (560), Expect = 2.000e-53
Identity = 155/417 (37.17%), Postives = 229/417 (54.92%), Query Frame = 0
Query:  328 ISTGGSHKVVTAHGIDDHHDA-----EAHDYFGSSMTNMGKNAKTGLTTIAVGA----PGALDTSGIVYFVEVNAEGEVEDYTYLTHEDFEEAVNEEMRGRRQGKNGGWGPNTALGWA---LENVGDLDGDGVNDLAVGA-LGYPGGSSKGAVFIFFLTEDHGIKSHTVITQDMGGFPHTLNEHWRFGSSLTRLGDLDGDGVTELAVGA---MGMGKERGGVFILFLNKDGSVKNTQLISSLH-GWDHKLSVQDQFGSAVRGIGDLDGDGIPDMVVSGDGFPSGEGF--GAVWVLFLNIDGSVKYWRRLDE----MDMALEAEALFGASIANMGDLNGDGLPELLVGAPGMHELS---GEAYIISLNKDGKIQHFKALTEDDHELDELVNTNDEFGWSVASLGDLDGDGIPDLAVAA 719
            ++T   + VV+   I D         +  D+FGSS+  +G     G+  IAVGA     GA + +G ++ + +NA+G V+              ++++     G  G +      G A   +  +GDLDGDGV DLAVGA     GG  KGAV+I FL  D  +K H  I+   G F    N   RFG S+T +GDLD DGV +LAVG       G +RG VFILF+N +G+VK+ Q ISS   G+ + L+  D+FG+A+  +GDLD DG+PD+ V G    S  G+  GAVW+LFLN +G+VK  +++D+        L+ +  FGAS+  +GD + DG  +LLVGA    +     G  +I+ LN +G ++  + ++  +      +N  D+FG S+A +GD++G G PDLAV A
Sbjct: 1644 VTTASGNSVVSHQKISDTEGGFTGILDNTDFFGSSIAPLGDLDGDGVDDIAVGALFDDDGAFN-AGAIWILFLNADGTVK-------------AHQKISNTEGGFTGTFSSKDLFGIAAAPISCMGDLDGDGVADLAVGADXXXDGGLDKGAVWILFLNTDGTVKGHQKISDTQGNFTAFFNGK-RFGQSVTCIGDLDSDGVPDLAVGMPRDNDGGGDRGAVFILFMNTNGTVKSYQKISSTQGGFGNGLTNADRFGNAISSLGDLDNDGVPDIAV-GAFLDSDLGYRKGAVWILFLNANGTVKAKQKIDQAQGNFTGVLDIKDFFGASVETIGDFDADGNNDLLVGARFDDDGGADRGAVWILFLNSNGTVKSHQKISSTEGGFAGPLNNGDQFGRSIALIGDINGGGTPDLAVGA 2044          
BLAST of NO18G02470 vs. NCBI_GenBank
Match: WP_108293106.1 (hypothetical protein [gamma proteobacterium symbiont of Ctena orbiculata] >PUB82766.1 hypothetical protein DBP02_13975 [gamma proteobacterium symbiont of Ctena orbiculata] >PUB88469.1 hypothetical protein DBP01_11905 [gamma proteobacterium symbiont of Ctena orbiculata])

HSP 1 Score: 216.5 bits (550), Expect = 2.900e-52
Identity = 147/389 (37.79%), Postives = 217/389 (55.78%), Query Frame = 0
Query:  347 DAEAHDYFGSSMTNMGKNAKTGLTTIAVGAPGALD---TSGIVYFVEVNAEGEVEDYTYLTHEDFEEAVNEEMRGRRQGKNGGWGPNTALGWALENVGDLDGDGVNDLAVGA-LGYPGGSSKGAVFIFFLTEDHGIKSHTVITQDMGGFPHTLNEHWRFGSSLTRLGDLDGDGVTELAVGAM---GMGKERGGVFILFLNKDGSVKNTQLISSLHG-WDHKLSVQDQFGSAVRGIGDLDGDGIPDMV--VSGDGFPSGEGFGAVWVLFLNIDGSVKYWRRLDE----MDMALEAEALFGASIANMGDLNGDGLPELLVGAPGMHE---LSGEAYIISLNKDGKIQHFKALTEDDHELDELVNTNDEFGWSVASLGDLDGDGIPDLAVAA 719
            D +  D FG ++ N+G     G+  +AVGAP   D     G V+ + ++++G+V+     TH+   +   +          G        G A+  + DL+GDG  D+AVGA L    G+ KGAV+I FL  D  + S   I+QD G F   L+++ +F  +L  +GDL+ DGVT+LAVG       G +RG V+ILF+N DG+V ++Q ISS  G  D  L  +D FG+AV  IGDL+GDG+ D+   VSGD    G   GAVW+LFLN DG+V+  +R+ +     D  L     FG ++AN GD+N DG  +L+VGA    +     G  +I+ L  DG++     +++ +   D  +++ D+FG +VA +GDLDGD I DL V A
Sbjct:   52 DLDVQDQFGLALANIGDLEVDGVIDLAVGAPFDDDDGENRGAVWILFMDSDGKVD-----THQKISDDSGD--------FTGDLDDGDQFGRAIAPLDDLNGDGFLDIAVGAPLDDDAGTDKGAVWILFLNGDGTVISEQKISQDEGEFEGDLDDNDQFAHALASIGDLNNDGVTDLAVGVPYDDDGGTDRGAVWILFMNSDGTVLSSQKISSDEGNLDRDLDDEDHFGTAVTEIGDLNGDGVTDLAVGVSGDD-DGGPERGAVWILFLNADGTVESKKRISQNRASFDGQLSDNDRFGGALANFGDINSDGTDDLVVGAKQSDDGGAERGAVWILFLEVDGEVISSSKISDTEGGFDGDLDSGDQFGAAVAQMGDLDGDDINDLVVGA 426          
The following BLAST results are available for this feature:
BLAST of NO18G02470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23456.13.900e-27563.74fg-gap repeat domain protein [Nannochloropsis gadi... [more]
EWM28646.16.700e-14245.05fg-gap repeat domain protein [Nannochloropsis gadi... [more]
WP_069124909.19.600e-5638.92hypothetical protein [Candidatus Thiodiazotropha e... [more]
KJS05253.16.200e-5536.82hypothetical protein VR77_09135, partial [Flavobac... [more]
EDY81761.18.200e-5536.07FG-GAP repeat domain protein [Verrucomicrobiae bac... [more]
WP_083794438.18.200e-5536.07hypothetical protein [Verrucomicrobiae bacterium D... [more]
WP_108275525.16.900e-5436.18hypothetical protein [gamma proteobacterium symbio... [more]
PUB76542.16.900e-5436.18hypothetical protein DBO99_13890 [gamma proteobact... [more]
PCH69432.12.000e-5337.17hypothetical protein COC01_01400 [Bacteroidetes ba... [more]
WP_108293106.12.900e-5237.79hypothetical protein [gamma proteobacterium symbio... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR046ncniR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G02470.1NO18G02470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|568900gene_8948Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100415g4gene7000Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G02470.1NO18G02470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G02470 ID=NO18G02470|Name=NO18G02470|organism=Nannochloropsis oceanica|type=gene|length=3366bp
TCCCAATCCTTCTTTCCTGTCTCTCTTCTTCCGAGGCGTATCCACGGGAA
ACCACCTCTTGGTCTGACGATATTTCGTCTGACAAGCAAGCAGATAGTGC
TAGAGCTATAGGCTTCAGATAAATACAAATGCAAGACAGCCTTTCGTTCC
CTCGATCCACTTTTACTCTCGCGTTGCAGCTCTTGGCGTCGTTTTTCGCC
CCGGGCGATCTGCATGTGCGGGAATCTTCCCAAGGATATCTTGTTTAATG
CGGTGCTGCGACGACACCACCCTCTTCTAGTGACCATTCCTTGTTGCATC
TTCACTCACACGCCTCCCTTTAACTCTCACATACAAACATACGCACACGT
AAACATGGCTAGGACGACTCAGAGCTGCCATCCCGCACACACAGCACCTT
GACGACAATGGATTACTTATCAGGTCCTCGTAAGGGAAGTGGGGGCGCAG
GGGCTAACGATCTCAACAGTCCAGGTCTCGTCTTTCGAGGACGAGGAGGT
ACGCCGCGGGCGGCTTCCGATCCCAATGGCTTTGAGGTGCAGGTCGACCT
TGAGACGCCGCAGACGGCCGCGGGAATGGGGGGGAGCAATAAAGTAGGCC
CTGGACGCACATCTGCTGGATCGGGTGCAAGCGCAGGAGTACCGTACATG
CACCAGCAAGGCATGGCGCCGCCAGAGgtacgtgttcaaagaaggaggat
agggagggagggcttggaatttcgctcgtagctctaatcttgtaataaag
cgacttgatgtgaggcttcctgcatgctttatagatcaatagagcatttc
atatacaatacatgtccgcatcacatgttcacggtctagtaatcgcccac
atagccagtaaaccactgcttgctatcgatacagcccccctccccacatg
cctgggctcgctttcctatcttaatttataacccgcaataacagaaatag
attagtctctcttctacacatctcttactttacaatacaagtgcattgat
ctgttggtctcatcctccctcccccccctctctcacgttcattatctccg
caccacaaaccacagTGGCAAACGCAAACCGCCAACGAGCACAATGTCGT
TGCCCCTCCCCGCCGCGGGTCTTCTCTTTCCGCTTCAGCATCTGCATATG
AAAACGACAAGAACAAGAAAACAAGACCATCTTTCTCTTCCTCCTCTTCC
TCCTCTGCCTCTGCACTCAACGGGGGCAGCACCCTGAAGAGCCTTTTGGC
CGGTGCCTGCCTCACATGCTGCTTCTTCGGCATCCTCTTCACAGTCGGAT
TTTTTGATGGCAATAAGACCAACTCCTCCGCTCATGTTTACGGTCGCCCC
CGTTCTACCTCCTCCGTCTCCTCCTCCTCTTCCCCCCTGAGCATGACGGA
CCTCCCTGTTGGTTCGAAACGCTCCCTCCGCGGCTCCGTCACCAACAGCG
TCATTACAAGCGAAGGTACGCGCATCCTGCAGACAGCCGTGGACCACCAC
CATTCTCGTGTTATCTTTGTGCCAGCCCGTGAACCATTTTCGCGCAGGAA
CATTCATCATTTCGCGAAGCATGGAGAGGCGGTTGGGATGGGGGGACACC
GAAACGAGACAGACAACGTGCGTGCGATCCACGTGGATGACATGGAGGAA
TTCGTAGAGGAGCGGCGGGAATATGTGAGGCATCCGGATGATGTATTGAT
GCGGCGTGAAGATTACGTAGATCATGACGTGGAGTTGGACGAACTCTTGG
AGGAGGTGAAGCTGCCCTTCCCGTTCATATCCACGGGGGGTTCCCACAAA
GTGGTTACAGCACACGGCATCGATGACCATCACGATGCGGAGGCTCACGA
TTATTTTGGCTCGTCCATGACGAATATGGGGAAGAATGCCAAGACGGGCT
TGACGACCATTGCGGTGGGTGCGCCCGGGGCCTTGGACACGAGCGGAATT
GTCTACTTTGTGGAAGTCAACGCTGAGGGCGAGGTGGAGGATTACACATA
CCTGACACATGAAGATTTCGAAGAGGCCGTGAACGAGGAAATGAGAGGAA
GGAGGCAAGGAAAGAACGGGGGATGGGGACCTAACACGGCCTTGGGATGG
GCGCTGGAGAATGTTGGCGATTTAGACGGGGACGGGGTCAATGACCTGGC
CGTGGGCGCACTCGGCTACCCGGGGGGGAGCTCCAAGGGTGCCGTGTTCA
TTTTCTTCTTGACAGAAGATCACGGAATTAAAAGCCACACAGTGATCACG
CAGGATATGGGTGGCTTTCCGCACACGTTGAATGAGCACTGGCGCTTTGG
GTCCTCTCTGACGCGGTTGGGGGACTTGGACGGGGATGGCGTGACGGAGC
TTGCGGTTGGTGCCATGGGCATGGGCAAGGAGCGTGGGGGGGTCTTCATC
CTCTTTCTCAATAAGGATGGAAGCGTAAAGAACACCCAACTCATCTCCTC
GCTACACGGTTGGGACCACAAATTGAGCGTACAGGACCAGTTTGGCTCGG
CGGTACGTGGGATCGGAGACTTAGATGGGGATGGCATTCCCGATATGGTT
GTATCGGGGGATGGGTTCCCTTCGGGTGAGGGGTTCGGTGCAGTGTGGGT
CCTTTTCCTGAACATTGACGGCTCGGTCAAATATTGGCGTCGCCTGGACG
AGATGGACATGGCTTTGGAAGCCGAAGCCTTATTTGGTGCCTCTATTGCG
AACATGGGTGACTTGAATGGGGATGGACTACCGGAACTGTTGGTGGGCGC
ACCCGGCATGCATGAATTGAGCGGAGAAGCGTACATTATTTCTTTGAACA
AGGACGGCAAAATTCAGCACTTTAAGGCGCTGACGGAGGACGACCACGAG
CTGGACGAGTTGGTGAATACGAACGACGAGTTTGGGTGGTCGGTCGCCAG
CCTCGGGGACTTGGATGGGGATGGAATTCCGGACTTGGCTGTTGCCGCTG
AAACTTCACCGAGCCACACCAATGTGCCGTCGATCCACATGATCTACCTG
GCGCCACAGGATATGGGTGCGAAAGAGGCAGCGGCACAAGACCCCAGGCG
TCGTTTGCGATAGGGGGATCTTGATAGGGGATCATGATAAGACGGAAGCA
TTTTTCTGTTTCAAAACAGGGGAGAGCAAACGAATAAAATCGAGATGGGG
AGTGAGGGAAGCAGAAATCACCTGTCGGTGCTGGTAGCGCGCCGTGATCA
GTCGAGGAATAGAGAGTGAAAAGAGGCACAAGACAGTCATCATAACAACG
TGAAGCGCGATTTGATGTGCGTGTGATAAAATAGAATTTGACACGAGCCG
TTGTAGTTCGCCAACATGTGTGTGTGACAAGCAAACGAAAAGAGAATGGG
AAAATATCGTTTCGAG
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protein sequence of NO18G02470.1

>NO18G02470.1-protein ID=NO18G02470.1-protein|Name=NO18G02470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=756bp
MDYLSGPRKGSGGAGANDLNSPGLVFRGRGGTPRAASDPNGFEVQVDLET
PQTAAGMGGSNKVGPGRTSAGSGASAGVPYMHQQGMAPPEWQTQTANEHN
VVAPPRRGSSLSASASAYENDKNKKTRPSFSSSSSSSASALNGGSTLKSL
LAGACLTCCFFGILFTVGFFDGNKTNSSAHVYGRPRSTSSVSSSSSPLSM
TDLPVGSKRSLRGSVTNSVITSEGTRILQTAVDHHHSRVIFVPAREPFSR
RNIHHFAKHGEAVGMGGHRNETDNVRAIHVDDMEEFVEERREYVRHPDDV
LMRREDYVDHDVELDELLEEVKLPFPFISTGGSHKVVTAHGIDDHHDAEA
HDYFGSSMTNMGKNAKTGLTTIAVGAPGALDTSGIVYFVEVNAEGEVEDY
TYLTHEDFEEAVNEEMRGRRQGKNGGWGPNTALGWALENVGDLDGDGVND
LAVGALGYPGGSSKGAVFIFFLTEDHGIKSHTVITQDMGGFPHTLNEHWR
FGSSLTRLGDLDGDGVTELAVGAMGMGKERGGVFILFLNKDGSVKNTQLI
SSLHGWDHKLSVQDQFGSAVRGIGDLDGDGIPDMVVSGDGFPSGEGFGAV
WVLFLNIDGSVKYWRRLDEMDMALEAEALFGASIANMGDLNGDGLPELLV
GAPGMHELSGEAYIISLNKDGKIQHFKALTEDDHELDELVNTNDEFGWSV
ASLGDLDGDGIPDLAVAAETSPSHTNVPSIHMIYLAPQDMGAKEAAAQDP
RRRLR*
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Synonyms
Publications