NO18G02440, NO18G02440 (gene) Nannochloropsis oceanica

Overview
NameNO18G02440
Unique NameNO18G02440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1146
Alignment locationchr18:792136..793281 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:792136..793281 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO18G02440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR046ncniR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G02440.1NO18G02440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G02440.1NO18G02440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G02440 ID=NO18G02440|Name=NO18G02440|organism=Nannochloropsis oceanica|type=gene|length=1146bp
ATGGACCGTTTTAACCTGCGCCTACCCCCAAAGCCCTCCCTCCCTCCCTC
TTCTCCTCCCTCCTTCAAGGAGCGGGCCGAGCGGGAGGACTACGTGAACT
TTTTGCGGCACTTGGCCACAGTCGAGGTGCCGAAGGGGGGCGAGGGCGAG
ATGGAGGGCAGGGAGGAAGGAGGATGGACGACTGCGGCCCTCGAAGCATT
TGGGGCACGACAGCAGCAGCAGCTCATGATGCTGCAGCAACAAGGAATGG
GAGGGAGGGAGGGAGGGGCGGGAGCATCGATGGCTGGAAGCGCTGGCCTC
CATTTCGGATCCCCTCCACCTAAGAGAGGAGTGCTCGCGAAAAAGCGCGG
GAGGCCGGATAAAGCTGTTGAGGGAACAGCGGCAGCAGCAGCAGCAGCGA
TATCCGTAGAGCTGGAGGCCGGGAGGACGACATCAGAGGCGGACTTCCTC
GCCCTCCTTGCCTCGGCCACCTCCAATACCACCACCGCCACCGCTGGGGA
CACCACGTCCTCCCTCCCGCCCTCTTCCCTCACCTTCACGGGGCTGAGTG
TCGAGGCCCCTCCCTACGTGCTTGGCGCGGCAGGCGTTCCTTCCACCTGC
ACCAACAGCACCCTGTCCATGACCCCTTCCTCCCCCGGCGCCTCCCTCCC
TTCCTCCTCCCCTCCCTCATCCTCCTCTTCCTCTTCCTCCTCCTACACCT
CCTCATCTGCTTCCTGTCCCCGCAGAAACCCCGTCGGGGCCGGGGCCCTT
CGGACTCACTGTGGGGAGGGGGAGGACGAGAGGGAGGGAGGGGAGGGCAG
CAGCAGCAACAACAACAACAACAACAGCGGCAGCGGCTTGTCGTTCTCCC
CTTCCTCCTTCTTTGTCTCCTCCACTTCATCACACCACCATCATCATTTT
ACGAGTAGTTTAAACAGCGGGCCTGGCGTGATGTCCGATGGTGGCCTTGG
GCTGGGCACTTCCTCCACCTCGTCCTCCCTCCCTCCCTCCCTCGCTTTTT
CTCCTCGAGGCCTCACTCTGTCCGTCGCGGCGCTCTTGGCGTCGACTGCA
GGGGCAGGGGAGGGGGGAGGGAGTGAGGGAGGGATGGTGGATGAGAGCGA
TGCGTTCTTTGCGTCACCTTCGCCGAGGCCCTCGCCCCGTGGATGA
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protein sequence of NO18G02440.1

>NO18G02440.1-protein ID=NO18G02440.1-protein|Name=NO18G02440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=382bp
MDRFNLRLPPKPSLPPSSPPSFKERAEREDYVNFLRHLATVEVPKGGEGE
MEGREEGGWTTAALEAFGARQQQQLMMLQQQGMGGREGGAGASMAGSAGL
HFGSPPPKRGVLAKKRGRPDKAVEGTAAAAAAAISVELEAGRTTSEADFL
ALLASATSNTTTATAGDTTSSLPPSSLTFTGLSVEAPPYVLGAAGVPSTC
TNSTLSMTPSSPGASLPSSSPPSSSSSSSSSYTSSSASCPRRNPVGAGAL
RTHCGEGEDEREGGEGSSSNNNNNNSGSGLSFSPSSFFVSSTSSHHHHHF
TSSLNSGPGVMSDGGLGLGTSSTSSSLPPSLAFSPRGLTLSVAALLASTA
GAGEGGGSEGGMVDESDAFFASPSPRPSPRG*
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Synonyms
Publications