NO18G02430, NO18G02430 (gene) Nannochloropsis oceanica

Overview
NameNO18G02430
Unique NameNO18G02430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4257
Alignment locationchr18:787871..792127 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:787871..792127 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO18G02430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR046ncniR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G02430.1NO18G02430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|226242gene_8944Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G02430.1NO18G02430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G02430 ID=NO18G02430|Name=NO18G02430|organism=Nannochloropsis oceanica|type=gene|length=4257bp
GTGACGAAAAAGGGCGATGTGGCTTGTTTATGTGAGTGTGATGCGGTAGA
GTTAAAGGGGGCATATTTGCGAGTGAGCCTCAGGGTGAGAGAAATGAAGG
AGGCGCGGGGGAAAGGCATTAGAGGCACGAGCGCGGCGGCTACAGGCACG
TGCTGTTGCGGGAGAAATCGGAATAGTGATGTGAGAGTTGACGTGTGTTT
CTCATCCCTATCTGCGTCCAAAGACAAAGTGGGGGAAGCATGAGAACGCT
TGGTGGTGTCGCCGCTGACGTTGCTTTGTGACGGATGGGGAGGCTGAGAG
ACACGTCAATCTGTCGAGGGACTGGCCCCACTCTACCTTGGGACTCATAC
AATTGCGTAAGAAGAACCTGAACACAAACTGGTAATATTCTCGTTGTCCG
CAGGTCGCGCAAGGTGCATTTCGATCGGTCCACAGAAGTAGAGTGTCAAC
TCGCCGATGGGGTTTCGGCTTTCGGCATTCGCCCAAAATCACTCAAGAAG
ACGGAAATGGGCAGCACTTTCTAGGCAAATCATCGTACGCATGACGATGT
GGTCGATTACATGTTTGTTCATTGGTTGTATCTGAAGTGCATGGGCTTTG
CTTTCGCTTTGTCCAAGTGTCATTCACTCATCCCGACACAGCACGCGCAT
TTTCTGTGTTCCTTCGCTCGCTCCTCCTCCTCCCAGCCTCCTTAACTTAA
ATTTGTCCAAGCCAACACAACATTGACATGGCTGGTCCCAAAGCATGCGC
GCGGGTAGACTTATGTGCGATAATTTTGTTTCTGTCCATATTCCTACAAG
AGAGACCAGCGACTTACGAGTTTTTGTCTGAGACTCTACAGCCTTCTCTC
CCTGAGACTCTTTGTTCCCAGCGGTTCGAAGCGAAGAAGGAGCACATGGC
CATCTTTTGCCCTCGCCCCCACAAGCAGCGCCGCGGAGGCATCAGTTTTG
GTCAGAACCATATGTTCTAGTTGTCAGCAAGCTTACAAGCAGGCGACATC
GACTGCGTGGAACACAAGTGCCACGGGTCAACTAGTTTTGCATGCATAAA
TCAGTAGCTTCTGTCTAATCATAGCGCACACCTCATCTTCTGCACAGCCC
ACTCAACATACACCAGTCGAAGACGACGCCAGCCACGGCGGCGACGACGA
AAGGCACGACGACGACGACGAAAACCGCGAGCAAGCAGGCGTAGGCGCAG
TTGAGTGGACGAAGGCACGACGACAAACGCACCTCGGGAGGGGCTTACAT
Ggtaagtgagcgacgacgggttacctaccgggaggatggctggcagagcg
gggaaatatcaaatagcgtgtcggcattcgctctcctccaagcatgtccc
tagactgaatgagtcgtccacttgctgttcatgtgctgatgatgtggcgt
ttctccctatgtcgcccttacgaatttgctgtcgacatgtcgctagcatc
ttcgcccacccacactctcccctcccacttccgcgacatacagGAGGCTT
GAACCTATCAACAATCGAAATTTAACTCAGAAAGGAAGACCGATCATCTT
GGGGTAAAAAACAGTCATGGATCCCTCCATTGTGCACCACCACGACGACG
CTGCTGCTGCCTTCCTCCTCAGCAGCGCAACTAAATCCACCACTACCTCG
TCCTCGTCCTCAGTTCTAAATACTGCTGCTCCAGCCAGCATGGCAAGCAA
GGCCCTTTATGTTGCTACTACTGGTGCAGCAGCAGGTCCGCTAATGCCGG
ACGCAGGCGCTCTCTTTGCTTCTCCCTCCTTCTCCATGGGCAGCCTCTTT
GGTCCCTCCTCAGTCTCGCAGGGAGGGAGGGAAGGAGGACGGGAGGGAGG
AAGTGTGTCATCACGGGGAATGGAATTCTTGTTTGAGAGTGAGGGAAGGG
AGGGAGGGAGAAAGGGGGGAGGAGCGCCTTTTTCCGTGTCGAAATTAACG
GATATGATGAGTCCCCTTCTTCCTTCTTCTGCAGCTTCTGCCAAGAGCAG
CAGCAGTGGTGGTGATGGTGGGCTCCTCACTCGCTACTCCCAACATCAGA
TACACCCACAACAGCAGCCGCCGTCGCTGCAGCTGCAGCAGCATCAGCAA
CAAGGCGAAAGGATGTGGGATCTGATGGCAGGCGAAGAGGGAGAGGAGGA
CGAGATGGAGGAAGAGGAAGAGGACGAGGTCAGGGTGGTGGTAGACGCCG
CGAGTATGTTACCGGTATTGGGGAAGAAGAAGAGAAGGACGAGGAAGGAG
GGGAGGGCGAGCAGAAGGTCGATTACGATGGCCTCGGCGAAGTCGGGAAT
GGTGGTGTACGAGGACGAGGAAGGGAGGGAGGAAGAGGAGGGGGAAGGAA
ACATGGTGTCTGGCTTCAGGCTTGCCGAGGAGGAAGAGGAAGAGATGGAG
GGAGGGAGGGATGAAGTGGCCGAGGAAATGATGCTTGAGAATAAGGAGAA
CAACAACAGGAACACCAGCCTCCCTGTATCTGCCTTGCTGCCCCAGCATG
ATGGAGGGGGAAGGAAGGCCAAGAAGGGCAACAGCAGCAGCAGCCGCCTC
AAGAAGCCCTCTGCTGCTGGTGTTGCCCGTCGCATCCCCTCCTTGGCCGA
TGCCGGGGTCTCCCCGGACTACCCTGTCGCGGTCATGACCAAGAAGAGCA
GCAGCAGTAGCAGCAACGACGACAGCAGCAGCAGCAGCAGCAGCAACCGC
AGAGCTACCTCCATAATCGCCGCCACGGCCGCCGCCGCCCGCCGCAGTAG
CACCGGGGCCATGCTTAACGCTCCTTCCTCCCTCGCCTCCTCCTCTATAG
CCAAGAAGAGCATCCCCTCCCACATGAACCACAACCACAAGAAGCGCGTC
GACTGGTCCAAAGGTGAGCCGGCTCAGCGGATGCACCAAGCTATCACGGA
CTGCACAGAGATCACCCAACGGGGCGAAAGTAGCAGTGGATGCAAGAGCT
GGAGGGGCGTGGCACGGATGTACGGCATCAGTTGGGCGGTGCTCTACCCT
AGGCTATCGGGGAAAATCGCCGTCAACGCCCCCCTCGGTGGGCGGGTCGT
TGGAGGGGGAGGAGGGAAGGAGGGGGGGAGGGAGGGGCTGAGCCATGACG
TGGAAGTGAAGCTCTTTCAGCACTGCTGCACCATGGCCAAGAGGGGGCAA
GGATTGGGAGGGTGGAGAGACCTCAAGCAACTCGCCGGCAAATGGGGGGA
AAAGGCTGCTGCGGCTGCCAAAAGCGGCAACGGCAGCAGCAGCAAAGCGG
GCCTGCCTTCCCTCCCGACCTCCTCATCGGCGGTGGCGGTGGACGCATGG
GCCCAGAAATTCCGGGTTCGTTTTCCTAGCTTGAAGACTTTCTACTGTCC
GCCTGAAGGAGGAGAAAGAGAAGGAGGGAGGGAGGGGGAGGGGTACTACG
TGTTGTGTACGCGGGATGAGGCAGGAAAGGATGCCAGGGAGGTGACGGAG
GAGGAAGAAGAGGAGGAGGAAGGGAGAGAGGACAAGAGGAAGGACCGGGA
ATTGTGTTCAGTCGTAGATGAGGCTATGGGCTTGTCGCCGGGTAAGGAGC
GAAGGAGGGATGGAGGGAGGGCAAGGAGTGTAGCAGGACGACGGCGGGCT
TCGGCGCCAGCAAGAGTGACGGGAGGGACAGGAGAAAGAGGGGAGGGAAC
ACGACGTGTTAGCTCTCGCCAACGGGTGATTAGCCTCAAGGGCCAGCTGC
TGGCAGATGCCGAGGAGGAGGAGGAAGAGGAGGAGGAGGAAGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAAGGAAAGAGCGAAGGGATGCAAGT
ACCGAAAGGTGAAGAGGATGAGGGGAAGGAAGAGCGGCCTGCGAACAAGC
GGAGGTGCATCCAGGGTGCCCCTTCCACTGCTCTTGCCAATGTCGTCCAT
CATACACACACACCCCTCCCCTCCACAACTTCCTCTACCATCACCAGTCA
CACGACGACCACCACATCATCCTCCTTCACCTCCTCCTCTTCCTCCTGTT
GCTCCTCCTCCTCCTTCTTCTCCCCCTCCTGCCCCCGTACCCACGAGCAA
CGCCAGCAGCAGCAGCAGCAGCAACAACAACAGCGACAGCAGCAGCACAC
CGACGATTCCTCCTTCTCCTCTTTCTCCCCCTCTTTCTCCTCCTCTCCCT
TCTCGAGCAGACAACGCCACCACGAAGACCCTGTTCGCGCCCTCCTCGCC
GCCCACCACTTCCTCCCTCCCTCCCTCCCCCCCTCCCCCTCCCCCTCTCC
TCAATGA
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protein sequence of NO18G02430.1

>NO18G02430.1-protein ID=NO18G02430.1-protein|Name=NO18G02430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=897bp
MDPSIVHHHDDAAAAFLLSSATKSTTTSSSSSVLNTAAPASMASKALYVA
TTGAAAGPLMPDAGALFASPSFSMGSLFGPSSVSQGGREGGREGGSVSSR
GMEFLFESEGREGGRKGGGAPFSVSKLTDMMSPLLPSSAASAKSSSSGGD
GGLLTRYSQHQIHPQQQPPSLQLQQHQQQGERMWDLMAGEEGEEDEMEEE
EEDEVRVVVDAASMLPVLGKKKRRTRKEGRASRRSITMASAKSGMVVYED
EEGREEEEGEGNMVSGFRLAEEEEEEMEGGRDEVAEEMMLENKENNNRNT
SLPVSALLPQHDGGGRKAKKGNSSSSRLKKPSAAGVARRIPSLADAGVSP
DYPVAVMTKKSSSSSSNDDSSSSSSSNRRATSIIAATAAAARRSSTGAML
NAPSSLASSSIAKKSIPSHMNHNHKKRVDWSKGEPAQRMHQAITDCTEIT
QRGESSSGCKSWRGVARMYGISWAVLYPRLSGKIAVNAPLGGRVVGGGGG
KEGGREGLSHDVEVKLFQHCCTMAKRGQGLGGWRDLKQLAGKWGEKAAAA
AKSGNGSSSKAGLPSLPTSSSAVAVDAWAQKFRVRFPSLKTFYCPPEGGE
REGGREGEGYYVLCTRDEAGKDAREVTEEEEEEEEGREDKRKDRELCSVV
DEAMGLSPGKERRRDGGRARSVAGRRRASAPARVTGGTGERGEGTRRVSS
RQRVISLKGQLLADAEEEEEEEEEEEEEEEEEEEEEEGKSEGMQVPKGEE
DEGKEERPANKRRCIQGAPSTALANVVHHTHTPLPSTTSSTITSHTTTTT
SSSFTSSSSSCCSSSSFFSPSCPRTHEQRQQQQQQQQQQRQQQHTDDSSF
SSFSPSFSSSPFSSRQRHHEDPVRALLAAHHFLPPSLPPSPSPSPQ*
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Synonyms
Publications