NO18G02220, NO18G02220 (gene) Nannochloropsis oceanica

Overview
NameNO18G02220
Unique NameNO18G02220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3744
Alignment locationchr18:710903..714646 +

Link to JBrowse

Properties
Property NameValue
Description5'-3' exonuclease family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:710903..714646 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:00353125'-3' exodeoxyribonuclease activity
GO:0004518nuclease activity
GO:00353125'-3' exodeoxyribonuclease activity
GO:0016788hydrolase activity, acting on ester bonds
GO:0004518nuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0090305nucleic acid phosphodiester bond hydrolysis
GO:0006281DNA repair
Vocabulary: INTERPRO
TermDefinition
IPR029060PIN_domain-like
IPR0362795-3_exonuclease_C_sf
IPR032641Exo1
IPR006085XPG_DNA_repair_N
IPR006086XPG-I_dom
IPR006084XPG/Rad2
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
BLAST of NO18G02220 vs. NCBI_GenBank
Match: XP_012197600.1 (hypothetical protein SPRG_03635 [Saprolegnia parasitica CBS 223.65] >KDO31717.1 hypothetical protein SPRG_03635 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 147.9 bits (372), Expect = 1.700e-31
Identity = 123/404 (30.45%), Postives = 179/404 (44.31%), Query Frame = 0
Query:    1 MGIQGLLQSLSPVIRPHVSLEEYRGKTLAVDGATMLYRAAYIIAEDLALYPRKDLSVPASTFSSSSNFLQSHRPPLXXXXXXXXXSRYWPYIERRLLALLHHGITPVFVLDGRRSPLKAETDLKRTSLRKE--ALRQGHALRARALSLPLSPQYHAERTHLLSQASTYFQKAVSIPRALVEDVTVRLKRMNIKFIVAPYEADAQVAWLCRVGLAHGVLTEDSDILVYVALAPKPFPVLFKLELVERGRXXXXXXXXXXXXXXXXXXXGARAQEIIFDPLVFATSGNATTPYLKDLCRIYLFSQHKPGEAARLFLASCILTGCDYLPSLPRMGPTTAIALAKQNRS--GTSDSDRRLGNMVRQLKXXXXXXXXXXXXXXXXXGYEDYLRRARMAEKLFAYHLVYD 401
            MGI GLL +L  V+ P     ++RG+T+AVD  + L++A Y  A DLA+                                      Y  YI RR   L   G+ P+ V DG + PLK+ T  KR S +++   +   H   AR+L          ER   +++ S YFQ++++I   ++  V   L++ N++F+ AP+EADAQ+ +LC+  +   ++TEDSDILVY A A    PVLFKLE  E G                           +       T G A+   +      +L   H+P    R+F+ +CIL GCD+L SLP +G   AI      R   GT     R+  ++ +LK                   +DYL R   AE LF +H VYD
Sbjct:    1 MGIAGLLGALKEVMAP-AHARDFRGQTVAVDALSWLHKACYGCAWDLAV--------------------------------GNETETYVKYILRRTDMLKAVGVKPLLVFDGNKIPLKSSTHDKRRSAKQDNHDMAMQHLREARSL-------VGDERKEKMAKTSQYFQRSINITSTIIASVHDALRKANVEFVTAPFEADAQMVFLCKQQVTTAIITEDSDILVYCAAANISVPVLFKLE--ETGDCK------------------------MLSKDAIHTHGKASANGVLRKLSHFLSGGHEP---TRMFVHACILAGCDFLDSLPHIGIVRAIQHVFDYRGVRGT----LRIPRLLSKLKFDGTTVP------------DDYLERFYKAEALFYHHYVYD 319          
BLAST of NO18G02220 vs. NCBI_GenBank
Match: GAY03947.1 (Hypothetical protein PINS_011771 [Pythium insidiosum])

HSP 1 Score: 147.9 bits (372), Expect = 1.700e-31
Identity = 123/406 (30.30%), Postives = 182/406 (44.83%), Query Frame = 0
Query:    1 MGIQGLLQSLSPVIRPHVSLEEYRGKTLAVDGATMLYRAAYIIAEDLALYPRKDLSVPASTFSSSSNFLQSHRPPLXXXXXXXXXSRYWPYIERRLLALLHHGITP-VFVLDGRRSPLKAETDLKRTSLRKEALRQGHALRARALSLPLSPQYHAERTHLLSQASTYFQKAVSIPRALVEDVTVRLKRMNIKFIVAPYEADAQVAWLCRVGLAHGVLTEDSDILVYVALAPKPFPVLFKLELVERGRXXXXXXXXXXXXXXXXXXXGARAQEIIFDPLVFATSGNATTPYLKDLCRIYLFSQHKPGEAARLFLASCILTGCDYLPSLPRMGPTTAIALAKQNRSGTSDSDRRLGNMVRQLKXXXXXXXXXXXXXXXXXGYEDYLRRARMAEKLFAYHLVYDCREEE 406
            MGI GLL+ L   +     L  Y G+ + VD  + L++A Y  A DL                                        Y  Y+ R++  L H GI   V V DG+R PLKA T  KR  L++E  R    L A A   P      A+    +++A  +FQ+AVSI   +V +V   L+  N++F+VAP+EADAQ+ W+CR GLA  ++TEDSD+LVY   A    PVLFKL+                         G     +    L     G+A T +LK L   +L +  K  +AAR+F+  C L+GCD+L SLP MG  TA+      R   + S  R+  +V +L                     D++ R +  E +F +H++++ + ++
Sbjct:    1 MGIDGLLRQLKDAVE-ETHLRRYAGQVVVVDAFSWLHKACYGCAFDLV--------------------------------TGRETEAYVRYMLRKVDLLRHCGIRDVVLVFDGQRLPLKASTHDKRQELKQENRRLAVQLMADARRQPTEDDRQAQ----VAKAFQHFQRAVSITPEIVSNVMQGLRNANVRFVVAPFEADAQMVWMCREGLASAIVTEDSDVLVYCVAASVDCPVLFKLD------------------------DGGMVHALSRLSLHRKCKGSANT-FLKRL--EHLTTSDK--QAARMFVQVCALSGCDFLDSLPNMGVVTALKHVFSFRG--APSHVRVQRLVSKLAASGTKIP------------SDFVSRFQQTECIFFHHIIFNEKTQQ 326          
BLAST of NO18G02220 vs. NCBI_GenBank
Match: XP_008614365.1 (hypothetical protein SDRG_10164 [Saprolegnia diclina VS20] >EQC32424.1 hypothetical protein SDRG_10164 [Saprolegnia diclina VS20])

HSP 1 Score: 145.6 bits (366), Expect = 8.400e-31
Identity = 121/402 (30.10%), Postives = 176/402 (43.78%), Query Frame = 0
Query:    1 MGIQGLLQSLSPVIRPHVSLEEYRGKTLAVDGATMLYRAAYIIAEDLALYPRKDLSVPASTFSSSSNFLQSHRPPLXXXXXXXXXSRYWPYIERRLLALLHHGITPVFVLDGRRSPLKAETDLKRTSLRKE--ALRQGHALRARALSLPLSPQYHAERTHLLSQASTYFQKAVSIPRALVEDVTVRLKRMNIKFIVAPYEADAQVAWLCRVGLAHGVLTEDSDILVYVALAPKPFPVLFKLELVERGRXXXXXXXXXXXXXXXXXXXGARAQEIIFDPLVFATSGNATTPYLKDLCRIYLFSQHKPGEAARLFLASCILTGCDYLPSLPRMGPTTAIALAKQNRSGTSDSDRRLGNMVRQLKXXXXXXXXXXXXXXXXXGYEDYLRRARMAEKLFAYHLVYD 401
            MGI GLL +L  V+ P     ++RG+T+AVD  + L++A Y  A DLA+                                      Y  YI RR   L   G+ P+ V DG + PLK+ T  KR S ++E   +   H   AR+L          ER   +++ S YFQ++++I  A++  V   L++ N++F+ AP+EADAQ+ +LC+  +   ++TEDSDILVY A A    PVLFKLE  E G                           +       T G  +   +      +L   H+P    R+F+ +CIL GCD+L SL  +G   AI      R        R+  ++ +LK                   +DYL R   AE LF +H VYD
Sbjct:    1 MGIAGLLGALKEVMAPS-HARDFRGQTVAVDALSWLHKACYGCAWDLAV--------------------------------GNETETYVKYILRRTDMLKAVGVKPLLVFDGNKIPLKSSTHDKRRSAKQENHDMAMQHLREARSL-------VGDERKEKMAKTSQYFQRSINITSAIIASVHDALRKANVEFVTAPFEADAQMVFLCKHQVTTAIITEDSDILVYCAAANISVPVLFKLE--ETGDCK------------------------MLSKDAIHTHGKTSANGVLRKLSYFLSGGHEP---TRMFVHACILAGCDFLDSLHHIGIVRAIQHVFDYRG--VKGTLRIPRLLSKLKFDGATVP------------DDYLERFYKAEALFYHHYVYD 319          
BLAST of NO18G02220 vs. NCBI_GenBank
Match: XP_009828485.1 (hypothetical protein H257_05340 [Aphanomyces astaci] >ETV81748.1 hypothetical protein H257_05340 [Aphanomyces astaci])

HSP 1 Score: 144.4 bits (363), Expect = 1.900e-30
Identity = 120/403 (29.78%), Postives = 181/403 (44.91%), Query Frame = 0
Query:    1 MGIQGLLQSLSPVIRPHVSLEEYRGKTLAVDGATMLYRAAYIIAEDLALYPRKDLSVPASTFSSSSNFLQSHRPPLXXXXXXXXXSRYWPYIERRLLALLHHGITPVFVLDGRRSPLKAETDLKRTSLRKEALRQGHALRARALSLPLSPQYHA-ERTHLLSQASTYFQKAVSIPRALVEDVTVRLKRMNIKFIVAPYEADAQVAWLCRVGLAHGVLTEDSDILVYVALAPKPFPVLFKLELVERGRXXXXXXXXXXXXXXXXXXXGARAQEIIFDPLVFATSGNA--TTPYLKDLCRIYLFSQHKPGEAARLFLASCILTGCDYLPSLPRMGPTTAIALAKQNRSGTSDSDRRLGNMVRQLKXXXXXXXXXXXXXXXXXGYEDYLRRARMAEKLFAYHLVYD 401
            MGI GL   L        +L +++GKT+ VD  + L++A Y  A DLAL                 N  Q+                Y  Y+ RR+  L + GI P+ V DG++ PLKA T  KR SL+     +  A++    SL  +   H  ER   + +A   FQ+++ +   ++  V   L++ N++F+VAP+EADAQ+ +LC+V  A  ++TEDSDILVY   A    P+L KLE                                +    +  + G    ++P+LK L     F    P ++ R+F+  CIL+GCD++ SLP +GP +A       R   +    RL  +V +LK                    DY+ R R AE LF +H VY+
Sbjct:    1 MGIVGLPTQLKEAYEV-ANLSQFKGKTIVVDALSWLHKACYGCAYDLAL----------------GNETQT----------------YITYVMRRVELLKNAGIHPILVFDGKKVPLKANTHDKRQSLKDS--NRDLAMK----SLHDAQNLHGDERKEKMMKAHNMFQRSIKVTSEIIYAVHAALRKANVEFVVAPFEADAQLVYLCKVHKASAIITEDSDILVYCITANVAVPILLKLE-------------------------SPSGMCKVVSKAILRSYGATPKSSPFLKKLVH---FLGDSP-DSMRMFVQMCILSGCDFIESLPNIGPVSAQKHVFAFRG--APGHLRLHRIVAKLKLDHSRLAIP----------SDYVDRCRAAEALFYHHYVYN 323          
BLAST of NO18G02220 vs. NCBI_GenBank
Match: OQR89181.1 (hypothetical protein THRCLA_09871 [Thraustotheca clavata])

HSP 1 Score: 142.1 bits (357), Expect = 9.300e-30
Identity = 119/407 (29.24%), Postives = 180/407 (44.23%), Query Frame = 0
Query:    1 MGIQGLLQSLSPVIRPHVSLEEYRGKTLAVDGATMLYRAAYIIAEDLALYPRKDLSVPASTFSSSSNFLQSHRPPLXXXXXXXXXSRYWPYIERRLLALLHHGITPVFVLDGRRSPLKAETDLKRTSLRKEALRQG--HALRARALSLPLSPQYHAERTHLLSQASTYFQKAVSIPRALVEDVTVRLKRMNIKFIVAPYEADAQVAWLCRVGLAHGVLTEDSDILVYVALAPKPFPVLFKLELVERGRXXXXXXXXXXXXXXXXXXXGARAQEIIFDPLVFATSGNATTPYLKDLCRIYLFSQHKPGEAARLFLASCILTGCDYLPSLPRMGPTTAIALAKQNRSGTSDSDRRLGNMVRQLKXXXXXXXXXXXXXXXXXGYEDYLRRARMAEKLFAYHLVYDCREEE 406
            MG+ GLL ++       V + +Y G+T+ VD  + L++A Y  A DLA+                                      Y  Y+ RR   L   GI P+ V DGR+ PLKA T  KR + +++    G  H   A+ LS         ER  ++++ +TYFQ++++I  A+++ V   L++  I F+ AP+EADAQ+ +LC++  A  ++TEDSDILVY A A    PVLFKL+                            A+ +  D L      + +   L+   ++ LF      E+ R+F+ + +L GCD+L SLPR+G   A      N  G   S  R+  +  +LK                    DYL R   AE LF YH V+   E +
Sbjct:    1 MGVDGLLSAVKEAFL-DVHVRDYAGQTVVVDALSWLHKACYGCAWDLAV--------------------------------GNDTETYVKYVVRRAEMLQSVGIKPILVFDGRKIPLKANTHGKRQASKEDNRELGMQHLREAKGLS-------GDERKEIMAKTATYFQRSINITSAIIKSVHKALRQAKINFVTAPFEADAQMVYLCKINKAAAIITEDSDILVYCAAANVNAPVLFKLD------------------------ESGLAKMLSIDRL-HKEGKHGSNAVLR---KVSLFLDGTM-ESTRMFVQASVLAGCDFLESLPRIGIAKAFTHV-FNFRGVKGS-MRIPRLFSKLKFEGIQVP------------TDYLDRFYKAEALFYYHYVFHPAENQ 324          
BLAST of NO18G02220 vs. NCBI_GenBank
Match: XP_008903079.1 (hypothetical protein PPTG_10201 [Phytophthora parasitica INRA-310] >ETL97432.1 hypothetical protein L917_05288 [Phytophthora parasitica] >ETN11263.1 hypothetical protein PPTG_10201 [Phytophthora parasitica INRA-310])

HSP 1 Score: 139.0 bits (349), Expect = 7.900e-29
Identity = 115/406 (28.33%), Postives = 196/406 (48.28%), Query Frame = 0
Query:    1 MGIQGLLQSLSPVI-RPHVSLEEYRGKTLAVDGATMLYRAAYIIAEDLALYPRKDLSVPASTFSSSSNFLQSHRPPLXXXXXXXXXSRYWPYIERRLLALLHHGITPV-FVLDGRRSPLKAETDLKRTSLRKEALRQGHALRARALSLPLSPQYHAERTHLLSQASTYFQKAVSIPRALVEDVTVRLKRMNIKFIVAPYEADAQVAWLCRVGLAHGVLTEDSDILVYVALAPKPFPVLFKLELVERGRXXXXXXXXXXXXXXXXXXXGARAQEIIFDPLVFATSGNATTPYLKDLCRIYLFSQHKPGEAARLFLASCILTGCDYLPSLPRMGPTTAIALAKQNRSGTSDSDRRLGNMVRQLKXXXXXXXXXXXXXXXXXGYEDYLRRARMAEKLFAYHLVYDCREE 405
            MG+ G L+ LS  + R H  L+++ G+TL VD  + L++A Y  A +L            ST   +  ++Q                    Y+ R++  + + G+  V  V DG+R PLK+ T  KR S ++E   +  AL+A A S  L      ER   +++A   FQ++V+I   ++ +V   L+   I F+VAP+EADAQ+AW+C+ GLA G++TEDSD++VY   A    PVL KLE  + G                       + + +   ++   S  A++  L  L +I+  +  +  EA R+F+  C+L GCD++ SLP +G  TA+      R   + +  R+  +V +L                     D++++   AE +F +H+V++ +++
Sbjct:    1 MGVDGFLRQLSDAVDRTH--LQQFAGQTLVVDALSWLHKACYGCAYEL------------STGRDTDKYVQ--------------------YMLRKVDMMRNCGVAKVILVFDGQRLPLKSLTQEKRQSYKEE--NRKRALQAMAASKRLQGN---ERQDEMNKAYQLFQRSVAITTEIIANVMNALRAARIPFVVAPFEADAQMAWMCKKGLAAGIVTEDSDVVVYCLTANVSSPVLVKLE--DNG-----------------------SAQAVSRTILHNNSAKASSSAL--LRKIHFLTSGEK-EATRMFVQVCVLAGCDFIDSLPNVGFATAVKHIFNFRG--APAHLRVQRLVSKLSSSGTKVP------------SDFMQQFLKAETIFYHHIVFNPKKQ 325          
BLAST of NO18G02220 vs. NCBI_GenBank
Match: ETO79712.1 (hypothetical protein F444_05639 [Phytophthora parasitica P1976])

HSP 1 Score: 139.0 bits (349), Expect = 7.900e-29
Identity = 115/406 (28.33%), Postives = 196/406 (48.28%), Query Frame = 0
Query:    1 MGIQGLLQSLSPVI-RPHVSLEEYRGKTLAVDGATMLYRAAYIIAEDLALYPRKDLSVPASTFSSSSNFLQSHRPPLXXXXXXXXXSRYWPYIERRLLALLHHGITPV-FVLDGRRSPLKAETDLKRTSLRKEALRQGHALRARALSLPLSPQYHAERTHLLSQASTYFQKAVSIPRALVEDVTVRLKRMNIKFIVAPYEADAQVAWLCRVGLAHGVLTEDSDILVYVALAPKPFPVLFKLELVERGRXXXXXXXXXXXXXXXXXXXGARAQEIIFDPLVFATSGNATTPYLKDLCRIYLFSQHKPGEAARLFLASCILTGCDYLPSLPRMGPTTAIALAKQNRSGTSDSDRRLGNMVRQLKXXXXXXXXXXXXXXXXXGYEDYLRRARMAEKLFAYHLVYDCREE 405
            MG+ G L+ LS  + R H  L+++ G+TL VD  + L++A Y  A +L            ST   +  ++Q                    Y+ R++  + + G+  V  V DG+R PLK+ T  KR S ++E   +  AL+A A S  L      ER   +++A   FQ++V+I   ++ +V   L+   I F+VAP+EADAQ+AW+C+ GLA G++TEDSD++VY   A    PVL KLE  + G                       + + +   ++   S  A++  L  L +I+  +  +  EA R+F+  C+L GCD++ SLP +G  TA+      R   + +  R+  +V +L                     D++++   AE +F +H+V++ +++
Sbjct:    1 MGVDGFLRQLSDAVDRTH--LQQFAGQTLVVDALSWLHKACYGCAYEL------------STGRDTDKYVQ--------------------YMLRKVDMMRNCGVAKVILVFDGQRLPLKSLTQEKRQSYKEE--NRKRALQAMAASKRLQGN---ERQDEMNKAYQLFQRSVAITTEIIANVMNALRAARIPFVVAPFEADAQMAWMCKKGLAAGIVTEDSDVVVYCLTANVSSPVLVKLE--DNG-----------------------SAQAVSRTILHNNSAKASSSAL--LRKIHFLTSGEK-EATRMFVQVCVLAGCDFIDSLPNVGFATAVKHIFNFRG--APAHLRVQRLVSKLSSSGTKVP------------SDFMQQFLKAETIFYHHIVFNPKKQ 325          
BLAST of NO18G02220 vs. NCBI_GenBank
Match: ETP48668.1 (hypothetical protein F442_05634 [Phytophthora parasitica P10297])

HSP 1 Score: 139.0 bits (349), Expect = 7.900e-29
Identity = 115/406 (28.33%), Postives = 196/406 (48.28%), Query Frame = 0
Query:    1 MGIQGLLQSLSPVI-RPHVSLEEYRGKTLAVDGATMLYRAAYIIAEDLALYPRKDLSVPASTFSSSSNFLQSHRPPLXXXXXXXXXSRYWPYIERRLLALLHHGITPV-FVLDGRRSPLKAETDLKRTSLRKEALRQGHALRARALSLPLSPQYHAERTHLLSQASTYFQKAVSIPRALVEDVTVRLKRMNIKFIVAPYEADAQVAWLCRVGLAHGVLTEDSDILVYVALAPKPFPVLFKLELVERGRXXXXXXXXXXXXXXXXXXXGARAQEIIFDPLVFATSGNATTPYLKDLCRIYLFSQHKPGEAARLFLASCILTGCDYLPSLPRMGPTTAIALAKQNRSGTSDSDRRLGNMVRQLKXXXXXXXXXXXXXXXXXGYEDYLRRARMAEKLFAYHLVYDCREE 405
            MG+ G L+ LS  + R H  L+++ G+TL VD  + L++A Y  A +L            ST   +  ++Q                    Y+ R++  + + G+  V  V DG+R PLK+ T  KR S ++E   +  AL+A A S  L      ER   +++A   FQ++V+I   ++ +V   L+   I F+VAP+EADAQ+AW+C+ GLA G++TEDSD++VY   A    PVL KLE  + G                       + + +   ++   S  A++  L  L +I+  +  +  EA R+F+  C+L GCD++ SLP +G  TA+      R   + +  R+  +V +L                     D++++   AE +F +H+V++ +++
Sbjct:    1 MGVDGFLRQLSDAVDRTH--LQQFAGQTLVVDALSWLHKACYGCAYEL------------STGRDTDKYVQ--------------------YMLRKVDMMRNCGVAKVILVFDGQRLPLKSLTQEKRQSYKEE--NRKRALQAMAASKRLQGN---ERQDEMNKAYQLFQRSVAITTEIIANVMNALRATRIPFVVAPFEADAQMAWMCKKGLAAGIVTEDSDVVVYCLTANVSSPVLVKLE--DNG-----------------------SAQAVSRTILHNNSAKASSSAL--LRKIHFLTSGEK-EATRMFVQVCVLAGCDFIDSLPNVGFATAVKHIFNFRG--APAHLRVQRLVSKLSSSGTKVP------------SDFMQQFLKAETIFYHHIVFNPKKQ 325          
BLAST of NO18G02220 vs. NCBI_GenBank
Match: GAY03824.1 (Hypothetical protein PINS_011657, partial [Pythium insidiosum])

HSP 1 Score: 137.9 bits (346), Expect = 1.700e-28
Identity = 105/319 (32.92%), Postives = 157/319 (49.22%), Query Frame = 0
Query:   88 YWPYIERRLLALLHHGITP-VFVLDGRRSPLKAETDLKRTSLRKEALRQGHALRARALSLPLSPQYHAERTHLLSQASTYFQKAVSIPRALVEDVTVRLKRMNIKFIVAPYEADAQVAWLCRVGLAHGVLTEDSDILVYVALAPKPFPVLFKLELVERGRXXXXXXXXXXXXXXXXXXXGARAQEIIFDPLVFATSGNATTPYLKDLCRIYLFSQHKPGEAARLFLASCILTGCDYLPSLPRMGPTTAIALAKQNRSGTSDSDRRLGNMVRQLKXXXXXXXXXXXXXXXXXGYEDYLRRARMAEKLFAYHLVYDCREEE 406
            Y  Y+ R++  L H GI   V V DG+R PLKA T  KR  L++E  R    L A A   P      A+    +++A  +FQ+AVSI   +V +V   L+  N++F+VAP+EADAQ+ W+CR GLA  ++TEDSD+LVY   A    PVLFKL+                         G     +    L     G+A T +LK L   +L +  K  +AAR+F+  C L+GCD+L SLP MG  TA+      R   + S  R+  +V +L                     D++ R +  E +F +H++++ + ++
Sbjct:   50 YVRYMLRKVDLLRHCGIRDVVLVFDGQRLPLKASTHDKRQELKQENRRLAVQLMADARRQPTEDDRQAQ----VAKAFQHFQRAVSITPEIVSNVMQGLRNANVRFVVAPFEADAQMVWMCREGLASAIVTEDSDVLVYCVAASVDCPVLFKLD------------------------DGGMVHALSRLSLHRKCKGSANT-FLKRL--EHLTTSDK--QAARMFVQVCALSGCDFLDSLPNMGVVTALKHVFSFRG--APSHVRVQRLVSKLAASGTKIP------------SDFVSRFQQTECIFFHHIIFNEKTQQ 321          
BLAST of NO18G02220 vs. NCBI_GenBank
Match: ETI50958.1 (hypothetical protein F443_05588 [Phytophthora parasitica P1569] >ETK90854.1 hypothetical protein L915_05453 [Phytophthora parasitica] >ETL44265.1 hypothetical protein L916_05399 [Phytophthora parasitica] >ETM50589.1 hypothetical protein L914_05405 [Phytophthora parasitica] >ETP20725.1 hypothetical protein F441_05602 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 136.7 bits (343), Expect = 3.900e-28
Identity = 114/406 (28.08%), Postives = 195/406 (48.03%), Query Frame = 0
Query:    1 MGIQGLLQSLSPVI-RPHVSLEEYRGKTLAVDGATMLYRAAYIIAEDLALYPRKDLSVPASTFSSSSNFLQSHRPPLXXXXXXXXXSRYWPYIERRLLALLHHGITPV-FVLDGRRSPLKAETDLKRTSLRKEALRQGHALRARALSLPLSPQYHAERTHLLSQASTYFQKAVSIPRALVEDVTVRLKRMNIKFIVAPYEADAQVAWLCRVGLAHGVLTEDSDILVYVALAPKPFPVLFKLELVERGRXXXXXXXXXXXXXXXXXXXGARAQEIIFDPLVFATSGNATTPYLKDLCRIYLFSQHKPGEAARLFLASCILTGCDYLPSLPRMGPTTAIALAKQNRSGTSDSDRRLGNMVRQLKXXXXXXXXXXXXXXXXXGYEDYLRRARMAEKLFAYHLVYDCREE 405
            MG+ G L+ LS  + R H  L+++ G+TL VD  + L++A Y  A +L            ST   +  ++Q                    Y+ R++  + + G+  V  V DG+R PLK+ T  KR S ++E   +  AL+A A    L      ER   +++A   FQ++V+I   ++ +V   L+   I F+VAP+EADAQ+AW+C+ GLA G++TEDSD++VY   A    PVL KLE  + G                       + + +   ++   S  A++  L  L +I+  +  +  EA R+F+  C+L GCD++ SLP +G  TA+      R   + +  R+  +V +L                     D++++   AE +F +H+V++ +++
Sbjct:    1 MGVDGFLRQLSDAVDRTH--LQQFAGQTLVVDALSWLHKACYGCAYEL------------STGRDTDKYVQ--------------------YMLRKVDMMRNCGVAKVILVFDGQRLPLKSLTQEKRQSYKEE--NRKRALQAMAAFKRLQGN---ERQDEMNKAYQLFQRSVAITTEIIANVMNALRAARIPFVVAPFEADAQMAWMCKKGLAAGIVTEDSDVVVYCLTANVSSPVLVKLE--DNG-----------------------SAQAVSRTILHNNSAKASSSAL--LRKIHFLTSGEK-EATRMFVQVCVLAGCDFIDSLPNVGFATAVKHIFNFRG--APAHLRVQRLVSKLSSSGTKVP------------SDFMQQFLKAETIFYHHIVFNPKKQ 325          
The following BLAST results are available for this feature:
BLAST of NO18G02220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_012197600.11.700e-3130.45hypothetical protein SPRG_03635 [Saprolegnia paras... [more]
GAY03947.11.700e-3130.30Hypothetical protein PINS_011771 [Pythium insidios... [more]
XP_008614365.18.400e-3130.10hypothetical protein SDRG_10164 [Saprolegnia dicli... [more]
XP_009828485.11.900e-3029.78hypothetical protein H257_05340 [Aphanomyces astac... [more]
OQR89181.19.300e-3029.24hypothetical protein THRCLA_09871 [Thraustotheca c... [more]
XP_008903079.17.900e-2928.33hypothetical protein PPTG_10201 [Phytophthora para... [more]
ETO79712.17.900e-2928.33hypothetical protein F444_05639 [Phytophthora para... [more]
ETP48668.17.900e-2928.33hypothetical protein F442_05634 [Phytophthora para... [more]
GAY03824.11.700e-2832.92Hypothetical protein PINS_011657, partial [Pythium... [more]
ETI50958.13.900e-2828.08hypothetical protein F443_05588 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR046ncniR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G02220.1NO18G02220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|225319gene_8918Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G02220.1NO18G02220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G02220 ID=NO18G02220|Name=NO18G02220|organism=Nannochloropsis oceanica|type=gene|length=3744bp
CTTTCCTCTTCCTTCCTTTATCCTTTTCTTTTGAGATCCCCTCCTAGCAC
CATCAAAATCGAGCGACAATAATTAAAAACAAAGCATCACACAAACCCGG
GGCGTTTTGAAACACTTGTCGTACTTGAAAACACACAATGAGATGCTTGA
CGGCACAACAAAGCGCGCGTTTTTCGGTTGTTCAAACATCCTCCCTAACC
CGCTGAGTCGCTGACTCTTTCTGGCGACAGTGTCGAACTTGCTGTGGTCT
GGCCCCTTTCCCTCACAGACACTGACCATTCCAGCTCGAGCACGAGCCCG
AAAGAGCCTGACATATTCACCCTTTCAACGCAACACAGGGCGACAAGAAA
TTAGGCTGAGCCGCCATCAGTATCAGCACCGCACGCCTGACCCCCGTTCT
TGCACAAGACCCTTGGACCGCCCGCCCACCCAATAGTTCACAGGAGCCGC
ACCTCCATCCGCCTTTGCGCACTGTCTATCGTGCCTCCGTCCGCCCTACA
CCATCAATATGGGCATTCAAGGCCTCCTCCAATCCCTCTCCCCTGTCATC
CGCCCCCATGTCTCGCTCGAAGAATACCGCGGCAAGACCCTGGCCGTGGA
CGGTGCTACCATGCTCTATCGTGCCGCCTACATCATTGCCGAGGATCTAG
CGCTCTACCCACGAAAAGATTTATCGGTACCAGCTTCCACCTTCTCCTCT
TCTTCCAATTTCCTGCAATCCCACCGTCCTCCCCTCCCCGTTCCTCCTCC
CCCACCTCTCCCCTCCCGTTACTGGCCGTACATTGAACGCCGCCTCCTCG
CCCTCCTCCACCATGGCATCACCCCTGTCTTCGTCCTGGATGGCCGCCGC
TCCCCTCTCAAAGCAGAAACAGACCTAAAACGCACGTCCCTCCGCAAGGA
AGCTCTCAGGCAAGGTCACGCTCTCCGGGCCCGCGCTCTCTCCCTCCCTC
TCTCCCCCCAGTATCACGCCGAACGCACTCACCTTCTCTCCCAAGCCTCC
ACCTACTTTCAAAAAGCTGTTTCGATCCCACGCGCGCTCGTTGAAGACGT
TACTGTCCGTTTAAAGCGGATGAACATCAAATTCATCGTAGCTCCCTACG
AGGCCGATGCCCAGGTGGCGTGGTTGTGTAGGGTCGGGCTGGCCCATGGT
GTCTTGACGGAAGATTCAGATATATTGGTGTATGTTGCTTTGGCGCCCAA
GCCCTTTCCTGTCTTGTTCAAGCTGGAATTGGTCGAGAGAGGGAGGGAGG
AAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAGGAGGACAGGGGATGGCG
TGGGGGGCACGGGCGCAGGAGATTATATTTGATCCCCTGGTGTTTGCTAC
CTCAGGGAATGCAACCACACCCTATCTTAAGGACTTATGTCGGgtatgta
cggggaggcagcttcctcctcccttcctccctccctctttcccccctccc
ttcctcccaccctcccttgcgtgcctccttcccccactgcaaccagccaa
ccttatctcccacccccttttctcccttcccctttctctccctctttccc
accttcagATCTACCTCTTCTCCCAGCACAAGCCCGGGGAAGCCGCGCGT
CTCTTTCTCGCCTCATGTATCTTGACGGGGTGCGACTACCTCCCCTCCCT
CCCTCGCATGGGACCCACAACCGCCATCGCCCTCGCCAAACAAAATCGAA
GCGGCACCAGCGACAGCGATCGGCGGCTCGGAAACATGGTCCGTCAGCTC
AAGCGAAAAGCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAAGGA
GAGTGGGTATGAAGACTACTTGCGGAGGGCCCGAATGGCGGAAAAGTTAT
TCGCATACCACCTCGTGTACGATTGTAGGGAGGAGGAAAGGGATGGAAGG
AAGAAGGGAGGGGGCAGAATGACAACCTACTTGCCCGTAAAGTACGCGGG
AGGGGAAGAGGGAGGGAGGGAGGGAGGAAGAGAGGGAGGGAAGGACATGA
TTACGATTGAGGAAACAGGGCTGGAAAAGAAAAGGAGAGGGGAAAATAGC
TGCGGGAATCAGCACTTGGAGGAAAAGGATGAGGAAGAGGATGAGAAGGA
GGATGAGGAGTTATCGTTATTAAAGAGGGATCTGCCTGTGGTGGAGAGAG
GGAGCGATCTAAGGTTGATCCTGGGGCCTCTGCTGGCCCCAGCAGAGGCG
CGCGCAGTAGCAGAGGGAAGAGCACATCCCGAGACCCTTCTTCCCTTGTC
CTTGGGAAGGAAGGGAGAAGGGGAGGAAGGAGGAGGTGGAAAAAATTGGC
GACGTGAAGGAGGTGAAAATTGGCGACATGAAGGGTTGCAGCCGCAGCAA
GCCTTATCGTCTGTTGGAGGGTCGTTGTTGCAGCAGCAGCAGCAGCAGCA
GCCACGCTCCCCTACGGGGTTGCGGTTGCCTGCTCAGAGGGGGAAGACGA
CATGGAAAGAGGGCGGGGGAGAGGAAGGGAAGGAGGAAAAGGAGGTCGAG
GAGGAGGGAGAAGGAGGGGAAAGAAAGCGATCTGCCACTCCTTTTTCGCA
GGATAAAGAGCTGATGCGCCTCAGGAACATGGTGAGAGAGCAGCAGCAGC
AGCAGCATAAGAAGGAGGAGGTGGTCCGTACACTGCTTGGTAAGGGAGGG
AAGGAGGACGAGGAGGAGGGCGAGGAGGAGGAGGAGGAGGAGGATGAGAA
CGACGACCCCATGATTGGTGCTGGTGCTGCTGTTGCTGTTTCTCGGTCGG
CTGTACAGCGACAGCATCGCGACAACATACTGGCGACAGATGCCGCGAAG
AGAGGAGGGAGGAAAGAGAAGGAAGAGGAAGAAGGAGAAGAAGAAGAAGA
AGAAGTGGGAGGTTTCTATAATTTACTCGCGCTAGTCGACGAGGAGAAGA
CGAAAACAGTGGAGGTGAGCTTCTTCTCTTCTTCTCTTGCTACGAAGAAG
CAGGAGGCAGTGCTATTGTCTTCTTCTTCTCCTTCGAATGCAAGGGGCCC
ATGTGTAACTGTCAATGGTTGTGATGGGGAGGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGGGGAGAAAAAAGAACGGAACAAGGCGTGAGA
GGTTGTAGCGGTGGTAGAGGAAAAAGAGGAGAGAGGGTAATAGAAAGAGG
GGAAGCAGGAATCGACAGCCGCAATCCGTTTGCGGTGTCTGTCTCGGTGC
TGAAGACGAGGCAGCAGGAGAGTTTTATTGCTTCCTTCAAGGAGGAGGAG
GAGGAAGGGGAGGGAGGGAGAAAGAAAGGGGGGGACGACAATAATAGTGA
CGATGAGGTGGTGGTGGTAGGAGAGGTGAAGAGCCATGGAGGAGGAGGAG
GAGGGGCAGGAGGGAAAGGGGCAGGGGAAGGAGCAGTAGGAGGGAAAGGT
AATGTCTCCTTTATCGGTGGGTCAATATCTCTCGCAGCTGCCGCTGCTTA
TACTGGTTCTGCTGCTGCTGCTGTAGACTGTGCGCCTGTGGGCATTGGGT
TGAAGCGATTCTTTGCTAGCACTTGCAGCAGCAGAAGCAGCAGCGGCAGC
AGCGGACGTAGTAGGAGCGGTAGGAGCAGTAGCAGCAGTAGCAGTAGCAG
CGCTTGTGCCCTCTCAAAGGCCAAGAAGGGAAGCAACAACAGTGGCAGTC
GTGGGAGGGGTCGGGGAAAAGGTGGGACAAAGAGAAGAAGATGCAGATGA
AGACAAAGCAAGGGAAATAAACATCGCAGTCGTGTGTATCTTTG
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protein sequence of NO18G02220.1

>NO18G02220.1-protein ID=NO18G02220.1-protein|Name=NO18G02220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1009bp
MGIQGLLQSLSPVIRPHVSLEEYRGKTLAVDGATMLYRAAYIIAEDLALY
PRKDLSVPASTFSSSSNFLQSHRPPLPVPPPPPLPSRYWPYIERRLLALL
HHGITPVFVLDGRRSPLKAETDLKRTSLRKEALRQGHALRARALSLPLSP
QYHAERTHLLSQASTYFQKAVSIPRALVEDVTVRLKRMNIKFIVAPYEAD
AQVAWLCRVGLAHGVLTEDSDILVYVALAPKPFPVLFKLELVERGREEGG
RGGGRGGGGGQGMAWGARAQEIIFDPLVFATSGNATTPYLKDLCRIYLFS
QHKPGEAARLFLASCILTGCDYLPSLPRMGPTTAIALAKQNRSGTSDSDR
RLGNMVRQLKRKAGGGGGGGGGGGKESGYEDYLRRARMAEKLFAYHLVYD
CREEERDGRKKGGGRMTTYLPVKYAGGEEGGREGGREGGKDMITIEETGL
EKKRRGENSCGNQHLEEKDEEEDEKEDEELSLLKRDLPVVERGSDLRLIL
GPLLAPAEARAVAEGRAHPETLLPLSLGRKGEGEEGGGGKNWRREGGENW
RHEGLQPQQALSSVGGSLLQQQQQQQPRSPTGLRLPAQRGKTTWKEGGGE
EGKEEKEVEEEGEGGERKRSATPFSQDKELMRLRNMVREQQQQQHKKEEV
VRTLLGKGGKEDEEEGEEEEEEEDENDDPMIGAGAAVAVSRSAVQRQHRD
NILATDAAKRGGRKEKEEEEGEEEEEEVGGFYNLLALVDEEKTKTVEVSF
FSSSLATKKQEAVLLSSSSPSNARGPCVTVNGCDGEGGGGGGGGGGGGGG
EKRTEQGVRGCSGGRGKRGERVIERGEAGIDSRNPFAVSVSVLKTRQQES
FIASFKEEEEEGEGGRKKGGDDNNSDDEVVVVGEVKSHGGGGGGAGGKGA
GEGAVGGKGNVSFIGGSISLAAAAAYTGSAAAAVDCAPVGIGLKRFFAST
CSSRSSSGSSGRSRSGRSSSSSSSSSACALSKAKKGSNNSGSRGRGRGKG
GTKRRRCR*
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Synonyms
Publications