NO18G02170, NO18G02170 (gene) Nannochloropsis oceanica
|
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G02170 vs. NCBI_GenBank
Match: OUX51096.1 (hypothetical protein CBE43_04830 [Rhodopirellula sp. TMED283]) HSP 1 Score: 196.8 bits (499), Expect = 3.100e-46 Identity = 116/321 (36.14%), Postives = 159/321 (49.53%), Query Frame = 0
Query: 413 LQILHASDVRHAMEYFVNSLLVSQDRKFLPGSTHGRHVEESYAITGAATPLPLPRGSMKIVDAQGRLLCDLDDTSSSNSSRPPSSPLGLSIPAFFSPSAAQGQQQXXXXXGAAGXXXXXXXXXXXXXXXXXXXXXXRSEVLKYWKKIVVHQGWLCKKGGFSKKWLKRYFVLYSTCMGHILCYYSHVHETALYAQNPQERNVIDCCRVEVLRPSSTLPDTPPYAFDVQSIIRTWTLCAADQADLHQWLVLLSFAVDSDVAVLPDDEVSFLVKPRYDPTMKLYLDEYSTRLRLHAWGISV-DVLEGERCHAVLMWPYTDLYKW 733
L +LH D A+E+F N + K STHGR V + G P P G + I D G ++ + R SS G S +G++ V +W +VVHQGWL KKGG +K W+KRY VLY T MGH LCYY+ ++ L+ +ER +ID C+V +RP S D PP +FD+ +I R WTL A +A + WL +++ A+D D A++PDDE+ F VKPR DP+ +L +DEYST L++ A G+SV V + W YTDLYKW
Sbjct: 3 LDVLHLKD---AIEHFWNRQKPPKPPKL--QSTHGRDVVTVTTLQGEIKAPPKPVGDLNITDEMGTVVRSSGQAHGGIAKR-KSSMYG---------SMVKGKK--------------------------PTGWTINERVKNHWDSVVVHQGWLLKKGGLAKSWIKRYAVLYRTAMGHFLCYYADFAKSPLFHDEERERRIIDLCKVTFVRPVSRHDDIPPNSFDICTIEREWTLSAESKASMQLWLQIVTRAIDEDTAIVPDDELVFTVKPRADPSQQLVMDEYSTALKVSASGVSVCSVTAADELVERFFWCYTDLYKW 282
BLAST of NO18G02170 vs. NCBI_GenBank
Match: CBN78911.1 (Pleckstrin homology domain [Ectocarpus siliculosus]) HSP 1 Score: 175.3 bits (443), Expect = 9.500e-40 Identity = 177/665 (26.62%), Postives = 256/665 (38.50%), Query Frame = 0
Query: 200 MEVEEEIKIRL---TLLRKVAPVGPRTQAPFQYIGMFAGTTKPKPFQRKRAKVSY-LKAGALPSLERMREMALTHSQGASLPVPQAASRRLSLALQHIHSGCVCFRV--------LKASHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLIVGYDGVKYRH----------------------------DSSVHQPH-SLDFSLPFSRLALWESIDTLPHGAGGNGLRLKEEGKEGEVFLQI--LHASDVRHAMEYFVNSLLVSQDRKFLPGSTHGRHVEESYAITGAATPLPLPRGSMKIVDAQGRLLCDLDDTSSSNSSRPPSSPLGLSIPAFFSPSAAQGQQQXXXXXGAAGXXXXXXXXXXXXXXXXXXXXXXRSEVLKYWKKIVVHQGWLCKKGGFS-KKWLKRYFVLYSTCMGHILCYYSHVHETALYAQNPQERNVIDCCRVEVLRPS---STLP--DTPPYAFDVQSIIRTWTLCAADQADLHQWLVLLSFAVDSDVAVLPDDEVSFLVKPRY---------DPTMKLYLDEYSTRLRLHAWGISVDVLEGERCHA-------------VLMWPYTDLYKWKI-LSQKGKMAVQLTVFPTDDYTKKIEFIFRTKKAAQIVNTLEYYIEKYVAWAHVRLEVEE 793
+++E+E+K R + A P+ Y+GMFAG TKPKPFQRKR +S+ + G LP+L+ MR + +G S PQ S R A+ + G F + S S+ +V G + D+ HQ + +A+W G GG R VFL I + R++MEYF N+ GSTHGR V + G LP G + VD G D +P SP + SP A G ++ G W+++VVHQGWL K+GG + K+W+ RYFVLY T GH L YY+ V E LY + +ER ++D C+V LRP LP + P AF V + R WTL A + + +WL ++S AVD DVAV+ D E+ F VK + + ++L LR + L H V W +TD YKW I L Q G A+ + F D + K+ + + T A ++ +E+ +EK+++ H+RLE +E
Sbjct: 88 IDMEDELKQRARAEAAHARNAGREPQAAPTSVYLGMFAGFTKPKPFQRKRPNLSFTVPEGKLPTLKEMRRWSFEEHEGISR--PQLCSLRPKHAMDAVFLGENRFSLSALEGLTPSSTSRVPDAQYRSTFGDLVLSFASVEVQPRTDCGKNATFSYDEIDDWSLSVVPGTGPRPPSGIVLWVVLPEEXXXXXXXXXXXXXXGPGDAGTHQAKVRREIETEARVVAVWREESNTRLGRGGRPCR--------RVFLGIPDEDLTLARNSMEYFWNARRAELRLPPKAGSTHGRCVASMVTLRGEVQAPALPTGRVDPVDLDG------VDVRVGQVIQP--SPKRGQLNLLPSPRALLGVEKKRTLRYNGG-------------------------ARPQWERVVVHQGWLRKRGGGAIKRWIWRYFVLYDTPQGHFLAYYNDVSEVPLYNEARRERQLVDLCKVCFLRPEIGRQKLPAVELPANAFTVVTTQRQWTLAADSRTAVLEWLRMISVAVDEDVAVVDDGEIMFEVKAHWARHGGEYGPENAGTVHLGSMGMELRFGFSEAAATSLAALAAHPKKRGSSSASYADNVRFWSFTDFYKWTIVLLQDGTRALAVQCFIDDQFKKREDMLLVTPNAKRLALAIEHQVEKFMSLMHLRLERQE 709
BLAST of NO18G02170 vs. NCBI_GenBank
Match: EWM23426.1 (hypothetical protein Naga_102493g1 [Nannochloropsis gaditana]) HSP 1 Score: 128.6 bits (322), Expect = 1.000e-25 Identity = 61/77 (79.22%), Postives = 67/77 (87.01%), Query Frame = 0
Query: 609 QERNVIDCCRVEVLRPSSTLPDTPPYAFDVQSIIRTWTLCAADQADLHQWLVLLSFAVDSDVAVLPDDEVSFLVKPR 686
QERNVIDCCRVE LRP S+ PDTP AFDVQSI RTWTLCAA++ DL QWL+LL+ A+D DVAVLPDDEVSFLVKPR
Sbjct: 25 QERNVIDCCRVEFLRPVSSTPDTPSCAFDVQSIERTWTLCAANETDLQQWLLLLASAIDMDVAVLPDDEVSFLVKPR 101
BLAST of NO18G02170 vs. NCBI_GenBank
Match: XP_009841130.1 (hypothetical protein H257_14906 [Aphanomyces astaci] >ETV69273.1 hypothetical protein H257_14906 [Aphanomyces astaci]) HSP 1 Score: 105.1 bits (261), Expect = 1.200e-18 Identity = 74/243 (30.45%), Postives = 123/243 (50.62%), Query Frame = 0
Query: 562 HQGWLCKKG--GF--SKKWLKRYFVLYSTCMGHILCY--YSHVHETALYAQNPQERNVIDCCRVEVLRPSSTLPDTPPYAFDVQSIIRTWTLCAADQADLHQWLVLLSFAVDSDVAVLPDDEVSFLVK------PRYDPTMKLYLDEYSTRLRLHAWGI---SVDVLEGERCHAVLMWPYTDLYKWKILSQKGKMAVQLTVFPTDDYTKKIEFIFRTKKAAQIVNTLEYYIEKYVAWAHVRLE 790
HQG L K GF ++ W K++ +L+ + +G L Y S +T+ + ID V +RP S LPD PP+AFD+ ++ RTW+ CA+D++D WL +L VD A++PD +S VK PT L + L + + G+ S G+ ++ + W YTD++KW ++ Q + ++ L+ F +K EF+ +TK AA + +E+++ K + V E
Sbjct: 344 HQGPLSKTASEGFHLTQSWKKKHAMLHDSPLGAWLSYTESSWSTDTSPIRKAEASSKRIDLASVLCIRPQSALPDAPPFAFDIVTLYRTWSFCASDESDHATWLHILGVFVDRAAALVPDAPLSCDVKVVVQNGVNDPPTGGCSLG--NATLTIASDGVRLTSATTSGGDDANSKMDWYYTDIHKWSLVLQP-QASLFLSCFMDSSCSKVGEFVLQTKNAAAMCQAIEFHVAKCLVKVDVLYE 583
BLAST of NO18G02170 vs. NCBI_GenBank
Match: XP_008874653.1 (hypothetical protein H310_10154 [Aphanomyces invadans] >ETV96876.1 hypothetical protein H310_10154 [Aphanomyces invadans]) HSP 1 Score: 104.0 bits (258), Expect = 2.700e-18 Identity = 78/251 (31.08%), Postives = 126/251 (50.20%), Query Frame = 0
Query: 560 VVHQGWLCKKG--GF--SKKWLKRYFVLYSTCMGHILCYYSHVHETALYAQNPQERNVIDCCRVEVLRPSSTLPDTPPYAFDVQSIIRTWTLCAADQADLHQWLVLLSFAVDSDVAVLPDDEVSFLVK-----PRYD-PTMKLYLDEYSTRLRLHAWGISVDVLEGERCHAVLMWPYTDLYKWKILSQKGKMAVQLTVFPTDDYTKKIEFIFRTKKAAQIVNTLEYYIEKYVAWAHVRLE---VEEGPSSP 798
V HQG L K GF ++ W K++ +L+ + +G L Y +T P + ID V +RP + LPD PP++FD+ ++ RTW+ CAAD+AD WL +L VD A++PD +S VK P D T + S L + + GI + + + W +TD++KW + Q + ++ L+ F +K EF+ +TK AA + +E+++ K +A V E V+ G + P
Sbjct: 317 VKHQGPLSKTASEGFHLTQSWKKKHAILHDSPLGAWLSYADTAEKT-----EPSSKR-IDLASVLCIRPQAALPDAPPFSFDIVTLYRTWSFCAADEADRAAWLRVLGEHVDLAAALVPDAPLSCEVKLATQQPLDDAATTRGPTPLTSATLAIASDGIRLTTAPSSDV-STIEWYFTDIHKWSLALQP-QPSLCLSCFMDASCSKVGEFVLQTKNAAAMCQAIEFHVAKCLAKVDVLHEARAVKVGQTPP 559
BLAST of NO18G02170 vs. NCBI_GenBank
Match: ETI40908.1 (hypothetical protein F443_13800 [Phytophthora parasitica P1569]) HSP 1 Score: 100.9 bits (250), Expect = 2.300e-17 Identity = 80/265 (30.19%), Postives = 126/265 (47.55%), Query Frame = 0
Query: 555 YWKKIVVHQGWLCKKGG-----FSKKWLKRYFVLYSTCMGHILCYYSHVHETALYAQNPQERNVIDCCRVEVLRP-SSTLP-----DTPP-YAFDVQSIIRTWTLCAADQADLHQWLVLLSFAVDSDVAVLPDDEVSFLVKPRYDPTMKLYLDEYSTRLRLHAWGISVDVLEGERCHAVL-MWPYTDLYKWKILSQKGKMAVQLTV-------------FPTDDYTKKIEFIFRTKKAAQIVNTLEYYIEKYVAWAHVRLEVEEG 794
++ K+ QG L K+ K W +++ VL+ T +G LCYY + P+ER +ID V +RP SS+ P +TP +AFDV ++ RTWT A + WL +L+ V+ + PD + F VKP T + E +T + + + G+S G +L W YTDL KW ++ Q+G + L +D T+ +F+FRT +A+ I +E+Y+ K +A +LEV G
Sbjct: 410 HYTKMFKFQGQLLKRQNARTFHLRKIWHQKFVVLFETPVGGFLCYYDKITHCPGMTDTPKERRIIDLSSVLSIRPVSSSSPVRSNTNTPTMHAFDVVTLYRTWTFAALEPEQYEIWLHVLTECVEKHATIAPDKILRFPVKPAM--TSQTCPSE-ATSIEISSHGVS--FCTGHEAEVLLSTWYYTDLEKWSVVFQQGHLCCLLKCRSPAPASPSSPRNIGSDIVTQ--DFLFRTTEASTICLAIEFYVGKCMA----KLEVLAG 663
BLAST of NO18G02170 vs. NCBI_GenBank
Match: ETK81019.1 (hypothetical protein L915_13449 [Phytophthora parasitica]) HSP 1 Score: 99.4 bits (246), Expect = 6.600e-17 Identity = 78/265 (29.43%), Postives = 124/265 (46.79%), Query Frame = 0
Query: 555 YWKKIVVHQGWLCKKGG-----FSKKWLKRYFVLYSTCMGHILCYYSHVHETALYAQNPQERNVIDCCRVEVLRP-SSTLP------DTPPYAFDVQSIIRTWTLCAADQADLHQWLVLLSFAVDSDVAVLPDDEVSFLVKPRYDPTMKLYLDEYSTRLRLHAWGISVDVLEGERCHAVL-MWPYTDLYKWKILSQKGKMAVQLTV-------------FPTDDYTKKIEFIFRTKKAAQIVNTLEYYIEKYVAWAHVRLEVEEG 794
++ K+ QG L K+ K W +++ VL+ T +G LCYY + P+ER +ID V +RP SS+ P + +AFDV ++ RTWT A + WL +L+ V+ + PD + F VKP T + E +T + + + G+S G +L W YTDL KW ++ Q+G + L +D T+ +F+FRT +A+ I +E+Y+ K +A +LEV G
Sbjct: 380 HYTKMFKFQGQLLKRQNARTFHLRKIWHQKFVVLFETPVGGFLCYYDKITHCPGMTDTPKERRIIDLSSVLSIRPVSSSSPVRSNTNTSTMHAFDVVTLYRTWTFAALEPEQYEIWLHVLTECVEKHATIAPDKILRFPVKPAM--TSQTCPSE-ATSIEISSHGVS--FCTGHEAEVLLSTWYYTDLEKWSVVFQQGHLCCLLKCRSPAPAPPSSPRNIGSDIVTQ--DFLFRTTEASTICLAIEFYVGKCMA----KLEVLAG 633
BLAST of NO18G02170 vs. NCBI_GenBank
Match: ETL34444.1 (hypothetical protein L916_13338 [Phytophthora parasitica]) HSP 1 Score: 99.4 bits (246), Expect = 6.600e-17 Identity = 78/265 (29.43%), Postives = 124/265 (46.79%), Query Frame = 0
Query: 555 YWKKIVVHQGWLCKKGG-----FSKKWLKRYFVLYSTCMGHILCYYSHVHETALYAQNPQERNVIDCCRVEVLRP-SSTLP------DTPPYAFDVQSIIRTWTLCAADQADLHQWLVLLSFAVDSDVAVLPDDEVSFLVKPRYDPTMKLYLDEYSTRLRLHAWGISVDVLEGERCHAVL-MWPYTDLYKWKILSQKGKMAVQLTV-------------FPTDDYTKKIEFIFRTKKAAQIVNTLEYYIEKYVAWAHVRLEVEEG 794
++ K+ QG L K+ K W +++ VL+ T +G LCYY + P+ER +ID V +RP SS+ P + +AFDV ++ RTWT A + WL +L+ V+ + PD + F VKP T + E +T + + + G+S G +L W YTDL KW ++ Q+G + L +D T+ +F+FRT +A+ I +E+Y+ K +A +LEV G
Sbjct: 410 HYTKMFKFQGQLLKRQNARTFHLRKIWHQKFVVLFETPVGGFLCYYDKITHCPGMTDTPKERRIIDLSSVLSIRPVSSSSPVRSNTNTSTMHAFDVVTLYRTWTFAALEPEQYEIWLHVLTECVEKHATIAPDKILRFPVKPAM--TSQTCPSE-ATSIEISSHGVS--FCTGHEAEVLLSTWYYTDLEKWSVVFQQGHLCCLLKCRSPAPASPSSPRNIGSDIVTQ--DFLFRTTEASTICLAIEFYVGKCMA----KLEVLAG 663
BLAST of NO18G02170 vs. NCBI_GenBank
Match: ETL87711.1 (hypothetical protein L917_13156 [Phytophthora parasitica]) HSP 1 Score: 99.4 bits (246), Expect = 6.600e-17 Identity = 78/265 (29.43%), Postives = 124/265 (46.79%), Query Frame = 0
Query: 555 YWKKIVVHQGWLCKKGG-----FSKKWLKRYFVLYSTCMGHILCYYSHVHETALYAQNPQERNVIDCCRVEVLRP-SSTLP------DTPPYAFDVQSIIRTWTLCAADQADLHQWLVLLSFAVDSDVAVLPDDEVSFLVKPRYDPTMKLYLDEYSTRLRLHAWGISVDVLEGERCHAVL-MWPYTDLYKWKILSQKGKMAVQLTV-------------FPTDDYTKKIEFIFRTKKAAQIVNTLEYYIEKYVAWAHVRLEVEEG 794
++ K+ QG L K+ K W +++ VL+ T +G LCYY + P+ER +ID V +RP SS+ P + +AFDV ++ RTWT A + WL +L+ V+ + PD + F VKP T + E +T + + + G+S G +L W YTDL KW ++ Q+G + L +D T+ +F+FRT +A+ I +E+Y+ K +A +LEV G
Sbjct: 380 HYTKMFKFQGQLLKRQNARTFHLRKIWHQKFVVLFETPVGGFLCYYDKITHCPGMTDTPKERRIIDLSSVLSIRPVSSSSPVRSNTNTSTMHAFDVVTLYRTWTFAALEPEQYEIWLHVLTECVEKHATIAPDKILRFPVKPAM--TSQTCPSE-ATSIEISSHGVS--FCTGHEAEVLLSTWYYTDLEKWSVVFQQGHLCCLLKCRSPAPASPSSPRNIGSDIVTQ--DFLFRTTEASTICLAIEFYVGKCMA----KLEVLAG 633
BLAST of NO18G02170 vs. NCBI_GenBank
Match: ETM40943.1 (hypothetical protein L914_13247 [Phytophthora parasitica]) HSP 1 Score: 99.4 bits (246), Expect = 6.600e-17 Identity = 78/265 (29.43%), Postives = 124/265 (46.79%), Query Frame = 0
Query: 555 YWKKIVVHQGWLCKKGG-----FSKKWLKRYFVLYSTCMGHILCYYSHVHETALYAQNPQERNVIDCCRVEVLRP-SSTLP------DTPPYAFDVQSIIRTWTLCAADQADLHQWLVLLSFAVDSDVAVLPDDEVSFLVKPRYDPTMKLYLDEYSTRLRLHAWGISVDVLEGERCHAVL-MWPYTDLYKWKILSQKGKMAVQLTV-------------FPTDDYTKKIEFIFRTKKAAQIVNTLEYYIEKYVAWAHVRLEVEEG 794
++ K+ QG L K+ K W +++ VL+ T +G LCYY + P+ER +ID V +RP SS+ P + +AFDV ++ RTWT A + WL +L+ V+ + PD + F VKP T + E +T + + + G+S G +L W YTDL KW ++ Q+G + L +D T+ +F+FRT +A+ I +E+Y+ K +A +LEV G
Sbjct: 410 HYTKMFKFQGQLLKRQNARTFHLRKIWHQKFVVLFETPVGGFLCYYDKITHCPGMTDTPKERRIIDLSSVLSIRPVSSSSPVRSNTNTSTMHAFDVVTLYRTWTFAALEPEQYEIWLHVLTECVEKHATIAPDKILRFPVKPAM--TSQTCPSE-ATSIEISSHGVS--FCTGHEAEVLLSTWYYTDLEKWSVVFQQGHLCCLLKCRSPAPASPSSPRNIGSDIVTQ--DFLFRTTEASTICLAIEFYVGKCMA----KLEVLAG 663 The following BLAST results are available for this feature:
BLAST of NO18G02170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G02170 ID=NO18G02170|Name=NO18G02170|organism=Nannochloropsis oceanica|type=gene|length=9277bpback to top protein sequence of NO18G02170.1 >NO18G02170.1-protein ID=NO18G02170.1-protein|Name=NO18G02170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=971bpback to top Synonyms
Publications
|