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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr18 | genome | chr18:677593..680953 + |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR011990 | TPR-like_helical_dom |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Homology
BLAST of NO18G02150 vs. NCBI_GenBank
Match: EWM23420.1 (hypothetical protein Naga_101378g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 113.6 bits (283), Expect = 2.000e-21 Identity = 121/202 (59.90%), Postives = 143/202 (70.79%), Query Frame = 0
Query: 377 QLFRRFKRRAAFFAGKALVSVKEWKGAVVMLEAAREIDKQLDPEGKSVDARETAALLVKARQEKHKEGKKEKAVWSKAFELSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWNEKTEYLTLLALGSAVLGGFAYFNFRNR 579
QLFRR+KR+AAFFAGKALV+++EW A+ +LE+AR +D LDP GK++++RE A+LL +ARQ K K+ KKEKAVWSKAF+LS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWNEKTE TL+ LG AVLGGFA+F++RN+
Sbjct: 11 QLFRRYKRKAAFFAGKALVNLQEWAAALSLLESARAVDMLLDPAGKTLESREAASLLARARQGKVKQDKKEKAVWSKAFQLS------------SEATAEEDREAQPSPPTAATGGTGLPASSLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWNEKTEMYTLITLGMAVLGGFAFFSYRNK 200
BLAST of NO18G02150 vs. NCBI_GenBank
Match: EWM23422.1 (hypothetical protein Naga_100843g3, partial [Nannochloropsis gaditana]) HSP 1 Score: 67.0 bits (162), Expect = 2.200e-7 Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 0
Query: 186 EVLDPLEIGEEVSTVWGVGVLKEVREAMNEGGKEAGKEKGVYVVEAVGWKMADGKAPVMYLQ 248
EV+D LE GEEVST WG+GV+ ++R K G+ YVV+A+ W+MADGKAP M+LQ
Sbjct: 165 EVMDSLEKGEEVSTTWGLGVITDIRAGSTPPAKGPGE---TYVVKALTWRMADGKAPTMFLQ 223
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G02150 ID=NO18G02150|Name=NO18G02150|organism=Nannochloropsis oceanica|type=gene|length=3361bp
GTAATGATGTGTGCCCAGGCCTGTGGAGTGATGGTGTGCGTGGGTGATAA
ATAAAAAAACGAGGAAGAACACAGAAGGCAAAAAAAACTTGCCTTGTTGT
TCTCTGTCATCGCTCAACCGCGATGACGTTTTGGCTGTCTCGGATATCCT
GACTTATTAATTGTAGCCTCTTTTGCGTGGCCGTCCTCGCGCACAAGGAG
CTCGACGTGCGCAACTCGCGTCGTCTTTATAAAGAGCCACGTGTGGTTGT
GTGGGGAAAACCTGCTTCTGTTTGTCCCCCGCTTTCACCAAGCAAAAACA
GCTCGATCACCTTCCCTCATCCCGAATTTGTTCCACCACTAATGGACATC
CTCTCCCACCATACAGCCACGACAAGAATGGTGGGTACCGACGAGAACGC
CTTGTCTGCCCCAGCTTTTGCTCCGTCGCGTCCGATGGAGGATGCAGGGT
CTCAAGGTATGATGACAGAGGAGAGTGGAGGAGGAGTGGGGGATCAGCAG
GAGCAGCAACAGCCGCAGCTGCCGCAGCTCCAAGGGAAGGACATAAATCC
TGTGAATTCCGCCTCGCAAGACGCCGACAAGGAGAAGAAGATAGGAAAGG
AAGGTGTCGTAGAGGCTCCCGAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
TCAGAACACACCCCTTCCTCTCCCCGTTCCTCCCCCTCGCCCTCGCCATC
CCCGGAAGATGAGACGTCTGTGCCGGTGGCGAAGGAGGCGGAAAATGACG
AGCAGAGTCCGTATAAGATCATGGGAGAGGTGAAAGAGGTAGGAAAGTCA
AAAACACAGACTGATGGTGACGCTGACGCGGAAGCTGCTGCCGCGCCCTC
CCCGTCTCCCGCCCCCACGCCCTCGCAGCAGCAGCGGGCACCAGCTGAGG
TGTTGGACCCCCTAGAGATTGGAGAGGAAGTGTCAACGGTGTGGGGGGTG
GGGGTACTGAAGGAAGTGAGGGAGGCCATGAATGAGGGCGGGAAGGAGGC
CGGGAAGGAGAAAGGGGTGTACGTGGTGGAGGCAGTGGGGTGGAAGATGG
CGGACGGAAAGGCGCCGGTCATGTACTTACAGgtacaacgagagaagggg
agagaggggggaagggaaggagggagggaaagtaggagggagatttctga
tttttggtgccattccttcgttttgggaccgcgtcccatccatccccact
ctaccccccgcacccacctcccctttcgtccctcccccgccacccgccca
cagCGAGTCCACATCGAGAAGATGACTCCGTACGTGCTCTACAAGTGGCC
CACGCACAAGAAGCTCCTGgtaagtctctccttcactccttccctctttc
cctgcctctttccctccctctctgtttcctacccttttctcgctcgctcc
ctcccttctgtctttctttccccctgttttccctcatattctcagacacc
tgacctctttctttccttccttccctcctttcctcctccagCGAGCCATT
TTCTGCAAGGAGGAAGGAAATAAGTGCTTCAAGAGGAAGGATTTAAATGG
GGCCGAGAAGCGGTACCTTGATACCATCGGCGTGGTGCAGgtaggagggc
ataagggagggcataagggagggcataagggagggtataagggagggcat
aagggagggcaggagggaggggggagcatgagccatctctacatcattct
caccctccctccctccctccctgcctccctcccctcttcagCTGATGGTG
GACCAAGAGCTCAACAACAAGCAGAAGGCGCAGAAGCTCGAAGTTTTAAT
TCCCACACTCAACAATTTGGGCACCGTCCGTCTGAAGCTACAAAAGCCCG
CGGAGGCCTGCGTGGTTGCTCGAACGgtacttgtccttccctcctcccct
ccctccctccctccctctctccctccctccctccctccctccctccctcc
catcttccctcttctcttctaatgcttcgtgtatctcctcatctcctgtt
cccttcttccctccctctctctccctctctctttctccctctcttcctat
catgcttccttcccttcctcccagGCCTACCACCTCATAGACGAGCTAGA
AAAACGTGGGCCGGAGAGCTTGGTGCTGCACGAACTGTTGGCGCTGGGAG
TGACCGAGGACCAGgtactaagggaagagagaagggcgggagggaaagag
ggagaggagagggaggtgcacagcgtgaaaaaggaggcaaaggtggacct
cgggacaggcgccgtcactcggtcaggactccctctgatgtatcatttgt
ttctcccctctgggagtctccgagctcttttgagtatacatatggtcttg
tgacggctttgtaacggcagacagggacccaatctttgtgacggaacgga
agaccgtcacttgaagtgatggtggaggcagcacgcgatacagcgagaaa
gggagagatttatcacttaccgacccctccgtcccccccttcctccttcc
ccccttccctccctcgctccctccctagCTCTTCCGTCGCTTCAAGAGGA
GAGCTGCTTTTTTCGCGGGCAAGGCGCTGGTGTCTGTGAAGGAATGGAAG
GGTGCGGTGGTGATGCTGGAGGCAGCCCGTGAGATCGACAAGCAACTCGA
CCCAGAGGGCAAGAGTGTCGATGCACGAGAAACAGCGGCACTGCTCGTTA
AAGCCAGGCAGGAGAAACATAAAGAAGGAAAGAAAGAGAAGGCGGTCTGG
AGTAAGgtgtgaaggaaggggagggagtgagtgagggagggagagggggt
gggcgacggatgcgcgtgcaccccagacaatccatattttgtctgtcact
ctcccacacctcactctcccttctttctccttactttccctccccctcta
tctatttctttcctacctcatcccctgcgcgttgtccgatttgaacagGC
ATTTGAACTCTCCTCTGAGGAGGCAGCAAAAGATGAGGCCAAAGCCCGCC
GCACTACTCCAACCGCAGCTGCGGGCCCTTCCGCGTTCCCTCCCTCCCTC
GGCGGCGGCACATCTCGTCCACCCCTGCCACCAGGAGCAGCAGCAGCAGC
AGCGGCAGCAGCAGCAGCAGGCGGAGGAGCAGCAGGAGGAGGGGCAGGGA
CTAAGAAGAAATCTCGTGCTTTGGAGGCGGGGAAGAAAAAGGGAGGAAAG
AAGGGAGGGAAGGAGGGAGGGGAGAAAGAAGGATGGTGGAACGAGAAGAC
GGAGTATCTAACGCTCTTGGCGTTGGGCTCGGCAGTGCTGGGTGGATTTG
CGTATTTCAATTTTCGCAATAGGAAATAGAGGGGGAAGAGGAAGGAATAA
AGGGCGGGCGG back to topprotein sequence of NO18G02150.1 >NO18G02150.1-protein ID=NO18G02150.1-protein|Name=NO18G02150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=580bp
MDILSHHTATTRMVGTDENALSAPAFAPSRPMEDAGSQGMMTEESGGGVG
DQQEQQQPQLPQLQGKDINPVNSASQDADKEKKIGKEGVVEAPEQQQQQQ
QQQSEHTPSSPRSSPSPSPSPEDETSVPVAKEAENDEQSPYKIMGEVKEV
GKSKTQTDGDADAEAAAAPSPSPAPTPSQQQRAPAEVLDPLEIGEEVSTV
WGVGVLKEVREAMNEGGKEAGKEKGVYVVEAVGWKMADGKAPVMYLQRVH
IEKMTPYVLYKWPTHKKLLRAIFCKEEGNKCFKRKDLNGAEKRYLDTIGV
VQLMVDQELNNKQKAQKLEVLIPTLNNLGTVRLKLQKPAEACVVARTAYH
LIDELEKRGPESLVLHELLALGVTEDQLFRRFKRRAAFFAGKALVSVKEW
KGAVVMLEAAREIDKQLDPEGKSVDARETAALLVKARQEKHKEGKKEKAV
WSKAFELSSEEAAKDEAKARRTTPTAAAGPSAFPPSLGGGTSRPPLPPGA
AAAAAAAAAAGGGAAGGGAGTKKKSRALEAGKKKGGKKGGKEGGEKEGWW
NEKTEYLTLLALGSAVLGGFAYFNFRNRK* back to top
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