NO18G02030, NO18G02030 (gene) Nannochloropsis oceanica

Overview
NameNO18G02030
Unique NameNO18G02030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4387
Alignment locationchr18:629115..633501 -

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Properties
Property NameValue
DescriptionC-CAP/cofactor C-like domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:629115..633501 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR017901C-CAP_CF_C-like
IPR012945Tubulin-bd_cofactor_C_dom
Vocabulary: Biological Process
TermDefinition
GO:0000902cell morphogenesis
Homology
BLAST of NO18G02030 vs. NCBI_GenBank
Match: EWM23408.1 (C-CAP/cofactor C-like domain protein [Nannochloropsis gaditana])

HSP 1 Score: 386.7 bits (992), Expect = 1.900e-103
Identity = 374/1034 (36.17%), Postives = 431/1034 (41.68%), Query Frame = 0
Query:    1 MWVWLREERFEAALPLNQRAIRPLTSQVIHELTRTLRACAKLEPTIS-SXXXXXXHLAGTEGGNERRKDVVAWIAYSSWVTEAWRVLQWGEATAHLFWEMLHLFAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVALTELCLFLWLHLPGALTKVSTHPATYNVIWPXXXXXXXXXGAIQ-------------NEIKAEAYHVSFMKKHFKDMLMDMHQVLVVEGGRDGGKQGEAQEWLLARGTYVG--SGGGRGGHGREG--------------------------------------------------GGDEVD-----------------------------------------------------------------------CWP-----APASRXXXXXXXXXXXXXXXXXXXGMDMRVTRRELDALGFLLSGGEEGMEGRQVRRLSSLVPFWRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAYILLHSWLEDVLCVNQALYPPPPDPFVGLPPLERQAINSLSLPLPMPPLLPDAPLSFHHHKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYPHPPLLPLVITALNHGTILHDTSLSFPXXXXXXXXXXXXFDPFLSTVPPPPLPRSLPLRRVFIQACHDANIYLLGPMEGAHIAACTDSTIVLGAVSGLVRVSNCERLTLVCAGRRLVICNCLDSIFPVYLSLPPVLAGDNRGCRLAPYNTAYPSLAHDLAAAGLWSVAKEGKGQELQELQP-NQWNAPLDLAAGNYAKGGGGEGGIGVVREGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAHPDHPMEGGIGGLRFSPSLLPALYRNPFPLPLEYASVLRERSTNLDRLQQSVLGSLTVDQRPGVETVVVNKFYEWLAASGNLRQVLDLIRLEGNEQLQ-RLEGGRYGGKEDEVDEREDDVMVAGEMEGVEGXXXXXMAAP---SGGLIGRIVAEHEQHA-AHHHQHY 887
            M VWLREERFEAALPLNQRAIRPLT  +IHEL R LR  A LEP    S         G EG    +K V AW++  +W++E+ RVLQWGE TA LFWEML LF PS                               RV L EL LFLWLHLP A TKVSTHPATYNV+WP            Q               + A   +V                                        +     +   +G  GR                                                    G   +                                                                         WP       +S   XXXXXXXXXXXXXXXXX +DMRV+  E DALGFLLSGGEE + GRQVR+LSSL P W                               C +++L +WL++ LCVN+ALYP PP               SL  P             FH                                       PH PL PL++T+LNHGT+LHD S       XXXXXXXXX                  LRRV +QACHDAN+YLLG                                    A RRLV+CNCLDS FPVYL  P VL GDNRGCRLAPYNT YPSL  DL  AG           EL   QP NQW++P+DL A  +   GGGEGG+G+ REG             XXXXXXXXXX                                    + P  P +G +      P+LL     NPFPLP EYASVLRERS  LDRLQQ+V+GSL+ +QRPGVE  +V+KFYEWLAASGNLRQVLDLI+LE  + L  R E    GG EDE    E+D+MVAG+MEGVE       A+P   S GLIGR VA HEQH  AH H H+
Sbjct:    1 MRVWLREERFEAALPLNQRAIRPLTPPIIHELIRILRRSATLEPANDPSQLDEANDEKGEEGRPCAQKVVWAWVSRGTWISESQRVLQWGEPTACLFWEMLTLFLPS---THRRPAPRKGGGEDGTEGGSEAGVPPSDRVTLVELSLFLWLHLPDASTKVSTHPATYNVVWPLDSGGGEQPSLAQPPPSPHLPSPATLRAMLAARSNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAARLAQSPQGDEGRASVTIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSPMSPRSYFQIQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWPVSRESTESSCGIXXXXXXXXXXXXXXXXXXLDMRVSAGEFDALGFLLSGGEE-LLGRQVRKLSSLAPLW----------TWGAGSRGVDPGEEGEEEEEGCPFLVLQTWLDEALCVNEALYPSPP---------------SLLFPAQKDE-------QFH---------------------------------------PHSPLPPLLVTSLNHGTVLHDAS----TPPXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRVHVQACHDANVYLLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARRLVVCNCLDSTFPVYLLRPAVLVGDNRGCRLAPYNTCYPSLPLDLRTAGF---------GELGSTQPRNQWDSPIDLTAEGHNGAGGGEGGLGLTREG-------------XXXXXXXXXXGRNAGLAGQEGSRAGGETRILPPEHFYTLSIPVPPASSPGLPGQGPMPPEGSPPTLL----YNPFPLPPEYASVLRERSVGLDRLQQTVIGSLSDEQRPGVEAALVSKFYEWLAASGNLRQVLDLIQLEREKGLSARDEKEGEGGVEDE----EEDMMVAGQMEGVEEAREGGRASPVPLSHGLIGRFVAAHEQHVPAHPHTHF 925          
BLAST of NO18G02030 vs. NCBI_GenBank
Match: XP_005853720.1 (hypothetical protein NGA_0109720, partial [Nannochloropsis gaditana CCMP526] >EKU22636.1 hypothetical protein NGA_0109720, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 160.2 bits (404), Expect = 2.900e-35
Identity = 91/172 (52.91%), Postives = 101/172 (58.72%), Query Frame = 0
Query:    1 MWVWLREERFEAALPLNQRAIRPLTSQVIHELTRTLRACAKLEPTIS-SXXXXXXHLAGTEGGNERRKDVVAWIAYSSWVTEAWRVLQWGEATAHLFWEMLHLFAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVALTELCLFLWLHLPGALTKVSTHPATYNVIWP 172
            M VWLREERFEAALPLNQRAIRPLT  +IHEL R LR  A LEP    S         G EG    +K V AW++  +W++E+ RVLQWGE TA LFWEML+LF P                                RV L EL LFLWLHLP A TKVSTHPATYNV+WP
Sbjct:    1 MRVWLREERFEAALPLNQRAIRPLTPPIIHELIRILRRSATLEPANDPSQLDEANDEKGEEGRPCAQKVVWAWVSRGTWISESQRVLQWGEPTACLFWEMLNLFLP---PTHRRPAPRKGGGEDGTEGGSEAGVPPSDRVTLVELSLFLWLHLPDASTKVSTHPATYNVVWP 169          
BLAST of NO18G02030 vs. NCBI_GenBank
Match: CBJ30275.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 144.4 bits (363), Expect = 1.600e-30
Identity = 106/322 (32.92%), Postives = 148/322 (45.96%), Query Frame = 0
Query:  510 PLRRVFIQACHDANIYLLGPMEGAHIAACTDSTIVLGAVSGLVRVSNCERLTLVCAGRRLVICNCLDSIFPVYLSLPPVLAGDNRGCRLAPYNTAYPSLAHDLAAAGLWSVAKEGKGQELQELQPNQWNAPLD--------LAAG------NYAKG---GGGEGGIGVVREGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAHPDHPMEGGIGGLRFSPSLLPALYRNPFPLPLEYASVLRERSTNLDRLQQSVL-GSLTVDQRPGVETVVVNKFYEWLAASGNLRQVLDLI 814
            PLR + +  C ++ +Y+L  +  A +  C D T+V+GA +G+VRV  CER+ LV   RRL + N L+ IFPV+++ PPVL GDNR C+ APYN+ YP     L  AGL        G+E  E+  N W  P++        +AAG      + AK    GG +GG+G +    S                                                       + A P  P   G       P   PA   NPF LP EYA+VL+ER   ++ L Q+++   LT  Q   +E  +  +F EWL A+GNLRQVLDL+
Sbjct:  117 PLRDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAGMVRVEECERMQLVTCCRRLTVTNSLECIFPVFVATPPVLCGDNRACQFAPYNSCYPRHKAHLQRAGL-------LGEEEDEVPANLWGNPVEASMMGMPSMAAGTPTSSASRAKSRSPGGAKGGLGGLGHDLS---------------------------------------------PAIMPPEQFYTLAVPVPPDSAG------DP---PA--ENPFGLPSEYAAVLQEREAAVEGLHQAIVDADLTPRQNRELEECIRGRFTEWLVATGNLRQVLDLV 375          
BLAST of NO18G02030 vs. NCBI_GenBank
Match: GAX19749.1 (hypothetical protein FisN_37Lh015 [Fistulifera solaris])

HSP 1 Score: 135.2 bits (339), Expect = 1.000e-27
Identity = 92/311 (29.58%), Postives = 134/311 (43.09%), Query Frame = 0
Query:  506 PRSLPLRRVFIQACHDANIYLLGPMEGAHIAACTDSTIVLGAVSGLVRVSNCERLTLVCAGRRLVICNCLDSIFPVYLSLPPVLAGDNRGCRLAPYNTAYPSLAHDLAAAGLWSVAKEGKGQELQELQPNQWNAPLDLAAGNYAKGGGGEGGIGVVREGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAHPDHPMEGGIGGLRFSPSLLPALYRNPFPLPLEYASVLRERSTNLDRLQQSVLGSLTVDQRPGVETVVVNKFYEWLAASGNLRQVLDLIRLE 817
            PR      V I  C +A+IYLL P+E A +  C++ TIVLGAV+GL+ V NC+++ + CA R+ ++ NC D    ++   PP+L GDNR C+ APYNT Y     DL  AGL  +    +  +  +   N+W  P++LA        G       +   S                                                        S               RF   L   LY +PF LP+EY   + ++   +  + Q+ L SL  +QR  +E  +   F EWL +SGNLRQVLDL+++E
Sbjct:  296 PRGERTHDVLIAECENAHIYLLQPLEHATVTNCSNCTIVLGAVAGLLHVVNCDKMAITCAARKFIVRNCCDIQTYLFSPTPPLLVGDNRNCQFAPYNTYYEGFRDDLVTAGLAVLVDNSQMTDALQTASNKWKQPIELAKLEVPPIPGSPANAEAMENTS--------------------------------------MPTPVLLSASDFSVLYVPSRXXXXXXXXXXXXYCRF---LSDVLYLSPFRLPVEYERRVLQKVERMKNV-QAALKSLGTEQRLQLEEELHQGFREWLVSSGNLRQVLDLVQIE 564          
BLAST of NO18G02030 vs. NCBI_GenBank
Match: OEU12588.1 (TBCC-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 134.4 bits (337), Expect = 1.700e-27
Identity = 94/325 (28.92%), Postives = 132/325 (40.62%), Query Frame = 0
Query:  511 LRRVFIQACHDANIYLLGPMEGAHIAACTDSTIVLGAVSGLVRVSNCERLTLVCAGRRLVICNCLDSIFPVYLSLPPVLAGDNRGCRLAPYNTAYPSLAHDLAAAGLWSVAKEGKGQELQ----------------ELQPNQWNAPLD---LAAGNYAKGGGGEGGIGVVREGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAHPDHPMEGGIGGLRFSPSLLPALYRNPFPLPLEYASVLRERSTNLDRLQQSVLGSLTVDQRPGVETVVVNKFYEWLAASGNLRQVLDLIRLE 817
            L  + I  C D ++YLL P E   IAACT  TIV+GAV+GL+ V +CER  +  A RR++I N  DS+  V+   PP+L GDNR C+ APYNT Y  L  DL A GL + A   +G +                  +   N+W  P++   L     A+GG      G                                                                A P           ++   L   L  +PF LP+EY      ++  +  +QQ++  S+  D++   E  +   F +WL  SGNLRQVLDL+ LE
Sbjct:  464 LHDLAISDCSDVHMYLLQPFENVTIAACTGCTIVVGAVAGLLHVVDCERTKITTAARRILISNSCDSVMNVFTPTPPLLVGDNRSCQFAPYNTYYEGLREDLLATGLAAAAAPAEGNQSPFHGSRSIENEGDWPPLQCASNKWKQPIEISKLEIPQVAQGGSNSPPSGSPSSSPGADDRAPSSNAASIGDSTVQAPILLPASEFHILFVPLESEIARQRRLELEMQESTGGNAEPPSTES------KYCRVLAEVLQFSPFRLPIEYERRALVKADRMRSIQQAIRKSIPEDKQQQFEEELNRGFRDWLTTSGNLRQVLDLVHLE 782          
BLAST of NO18G02030 vs. NCBI_GenBank
Match: XP_002185264.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43396.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 131.7 bits (330), Expect = 1.100e-26
Identity = 101/337 (29.97%), Postives = 136/337 (40.36%), Query Frame = 0
Query:  511 LRRVFIQACHDANIYLLGPMEGAHIAACTDSTIVLGAVSGLVRVSNCERLTLVCAGRRLVICNCLDSIFPVYLSLPPVLAGDNRGCRLAPYNTAYPSLAHDLAAAGLWSVA------------------KEGKGQELQELQPNQWNAPLDLA-------------AGNYAKGGGGEGGIGVVREGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAHPDHPMEGGIGGLRFSPSLLPALYRNPFPLPLEYASVLRERSTNLDRLQQSVLGSLTVDQRPGVETVVVNKFYEWLAASGNLRQVLDLIRLE 817
            L  + I  C DA+ YLL P E A IAACT  TIV+GAV+GL+ + +CE+ ++  A RRL++ N  D    V+   PP+L GDNR C+ APYNT Y     DL A GL +                     +G    LQ    N+W  P++LA               N + GG    G      G S                                                            DH  E G    ++   L   L  +PF LP+EY   +  +   +  +QQSV  +LT +Q+   E  +   F +WL  SGNLRQVLDL+ LE
Sbjct:  484 LHDLVISECSDAHFYLLQPFEHATIAACTGCTIVVGAVAGLLHIVDCEKTSITSAARRLLVSNSSDVQMCVFTPSPPLLVGDNRSCQFAPYNTYYDGFREDLLATGLAAAVVPEHQSPYHGSGGRNYTDTDGSWPPLQ-CASNKWKHPVELARLEMPQIXXXXXXXSNTSIGGVASAGADDKAMGKS-------------------GTGNDTSVHAPVLVPASEFHILFVPIESDASKQRRLEADENDHSSEPGRLESQYCRLLSELLQTSPFRLPMEYERRVLMKVDRMKTIQQSVQKNLTTEQQAKFEEELNRGFRDWLVTSGNLRQVLDLVHLE 800          
BLAST of NO18G02030 vs. NCBI_GenBank
Match: XP_002184166.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44344.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 131.7 bits (330), Expect = 1.100e-26
Identity = 101/337 (29.97%), Postives = 136/337 (40.36%), Query Frame = 0
Query:  511 LRRVFIQACHDANIYLLGPMEGAHIAACTDSTIVLGAVSGLVRVSNCERLTLVCAGRRLVICNCLDSIFPVYLSLPPVLAGDNRGCRLAPYNTAYPSLAHDLAAAGLWSVA------------------KEGKGQELQELQPNQWNAPLDLA-------------AGNYAKGGGGEGGIGVVREGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAHPDHPMEGGIGGLRFSPSLLPALYRNPFPLPLEYASVLRERSTNLDRLQQSVLGSLTVDQRPGVETVVVNKFYEWLAASGNLRQVLDLIRLE 817
            L  + I  C DA+ YLL P E A IAACT  TIV+GAV+GL+ + +CE+ ++  A RRL++ N  D    V+   PP+L GDNR C+ APYNT Y     DL A GL +                     +G    LQ    N+W  P++LA               N + GG    G      G S                                                            DH  E G    ++   L   L  +PF LP+EY   +  +   +  +QQSV  +LT +Q+   E  +   F +WL  SGNLRQVLDL+ LE
Sbjct:  484 LHDLVISECSDAHFYLLQPFEHATIAACTGCTIVVGAVAGLLHIVDCEKTSITSAARRLLVSNSSDVQMCVFTPSPPLLVGDNRSCQFAPYNTYYDGFREDLLATGLAAAVVPEHQSPYHGSGGRNYTDTDGSWPPLQ-CASNKWKHPVELARLEMPQIXXXXXXXSNTSIGGVASAGADDKAMGKS-------------------GTGNDTSVHAPVLVPASEFHILFVPIESDASKQRRLEADENDHSSEPGRLESQYCRLLSELLQTSPFRLPMEYERRVLMKVDRMKTIQQSVQKNLTTEQQAKFEEELNRGFRDWLVTSGNLRQVLDLVHLE 800          
BLAST of NO18G02030 vs. NCBI_GenBank
Match: XP_002289616.1 (hypothetical protein THAPSDRAFT_268606 [Thalassiosira pseudonana CCMP1335] >EED93153.1 hypothetical protein THAPSDRAFT_268606 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 131.0 bits (328), Expect = 1.900e-26
Identity = 98/338 (28.99%), Postives = 140/338 (41.42%), Query Frame = 0
Query:  511 LRRVFIQACHDANIYLLGPMEGAHIAACTDSTIVLGAVSGLVRVSNCERLTLVCAGRRLVICNCLDSIFPVYLSLPPVLAGDNRGCRLAPYNTAYPSLAHDLAAAGLWSVAKE----------------GKGQELQELQP--------NQWNAPLDLAAGNYAKGGGGEGGIGVVREGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXST--------AHPDHPMEGGIGGLRFSPSLLPALYRNPFPLPLEYASVLRERSTNLDRLQQSVLGSLTVDQRPGVETVVVNKFYEWLAASGNLRQVLDLIRLE 817
            L  + I  C D   YLL P E A +AACTD TIV+GAV+GL+ V +CER T+  A RR+V+ N  D +  ++   PP+L GDNRGC+ APYNT Y  L  DL A GL +  +                 G G+    L P        N+W  P   + G  A     +  + +V +                                                          S+         H  H  +G I    +  +L   L  +PF +P +Y   +  ++  +  LQQ+++  L   QR  ++  +   F +WL ASGNLRQVLDL+ LE
Sbjct:  154 LHDLHISDCSDTTFYLLQPFEHATVAACTDCTIVIGAVAGLLHVVDCERTTITSAARRVVVSNSSDVVHYLFTPSPPLLVGDNRGCQFAPYNTYYEGLREDLLATGLAAALRSTVSSSSDRPASPSRGGGDGRSSPTLPPLPALQCASNKWKMPGSHSPG--ADDRAFKSSVDLVMQTPVLLPPSDFEILLVPVESEEARVRRRLQRQAEEDTINEEEAAPFDGGEDTGTVYSNASSLTGERDRGEHASHRSDGPIES-DYCRNLADILTLSPFHMPHDYERRVVAKAERVRALQQAIVQDLNDQQRANLQEELNRGFQDWLVASGNLRQVLDLVHLE 488          
BLAST of NO18G02030 vs. NCBI_GenBank
Match: GAX26435.1 (hypothetical protein FisN_37Hh015 [Fistulifera solaris])

HSP 1 Score: 129.4 bits (324), Expect = 5.500e-26
Identity = 93/303 (30.69%), Postives = 137/303 (45.21%), Query Frame = 0
Query:  514 VFIQACHDANIYLLGPMEGAHIAACTDSTIVLGAVSGLVRVSNCERLTLVCAGRRLVICNCLDSIFPVYLSLPPVLAGDNRGCRLAPYNTAYPSLAHDLAAAGLWSVAKEGKGQELQELQPNQWNAPLDLAAGNYAKGGGGEGGIGVVREGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAHPDHPMEGGIGGLRFSPSLLPALYRNPFPLPLEYASVLRERSTNLDRLQQSVLGSLTVDQRPGVETVVVNKFYEWLAASGNLRQVLDLIRLE 817
            V I  C  A+IYLL P+E A ++ C++ TIVLGAV+GL+ V NC++L++ CA R++++ N  D    ++   PP+L GD+R C+ APYNT Y     DL  AGL +V  +    +  +   N+W  P++LA        G       +   S                                                        +T   D+         RF   L   LY +PF LP+EY   + +R   +  + Q+ L SL  +QR  +E  +   F EWL +SGNLRQVLDL++LE
Sbjct:  287 VTITECEHAHIYLLQPLEHATVSNCSNCTIVLGAVAGLLHVVNCDKLSITCAARKIIVRNGCDIQTYLFSPTPPLLVGDHRNCQFAPYNTYYDGFRDDLVTAGL-AVLVDSPMTDALQTASNKWKQPIELAKLEVPPIPGSPANAEALENTS------------------------------------MPTPVLLPASDFAVLYVPSRNTDDEDY--------CRF---LSDVLYLSPFRLPVEYERRVLQRVERMKNV-QAALKSLGTEQRMQLEDELHQGFREWLVSSGNLRQVLDLVQLE 540          
BLAST of NO18G02030 vs. NCBI_GenBank
Match: PSC72880.1 (TBCC domain-containing 1 [Micractinium conductrix])

HSP 1 Score: 109.8 bits (273), Expect = 4.500e-20
Identity = 59/134 (44.03%), Postives = 76/134 (56.72%), Query Frame = 0
Query:  510 PLRRVFIQACHDANIYLLGPMEGAHIAACTDSTIVLGAVSGLVRVSNCERLTLVCAGRRLVICNCLDSIFPVYLSLPPVLAGDNRGCRLAPYNTAYPSLAHDLAAAGLWSVAKEGKGQELQELQPNQWNAPLDL 644
            P  RV +  CHDA IY L P++ A I ACTD  +VLGAV   +RV  CER+ ++CA R + I  C D IF +  + PP+L GDNR  +LAPYN+ Y  L   +  AG+                PNQW+APL L
Sbjct:  382 PTGRVRVLDCHDAVIYCLAPLQYALITACTDCIVVLGAVGRTLRVERCERVQVICACRSVTINTCHDCIFYLGTNQPPLLLGDNRFLQLAPYNSGYERLPAHMGLAGV-------------RASPNQWDAPLAL 502          
The following BLAST results are available for this feature:
BLAST of NO18G02030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23408.11.900e-10336.17C-CAP/cofactor C-like domain protein [Nannochlorop... [more]
XP_005853720.12.900e-3552.91hypothetical protein NGA_0109720, partial [Nannoch... [more]
CBJ30275.11.600e-3032.92conserved unknown protein [Ectocarpus siliculosus][more]
GAX19749.11.000e-2729.58hypothetical protein FisN_37Lh015 [Fistulifera sol... [more]
OEU12588.11.700e-2728.92TBCC-domain-containing protein [Fragilariopsis cyl... [more]
XP_002185264.11.100e-2629.97predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002184166.11.100e-2629.97predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002289616.11.900e-2628.99hypothetical protein THAPSDRAFT_268606 [Thalassios... [more]
GAX26435.15.500e-2630.69hypothetical protein FisN_37Hh015 [Fistulifera sol... [more]
PSC72880.14.500e-2044.03TBCC domain-containing 1 [Micractinium conductrix][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR046ncniR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G02030.2NO18G02030.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO18G02030.1NO18G02030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|604414gene_8897Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G02030.2NO18G02030.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO18G02030.1NO18G02030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G02030 ID=NO18G02030|Name=NO18G02030|organism=Nannochloropsis oceanica|type=gene|length=4387bp
ATGTGGGTTTGGCTACGCGAGGAACGCTTTGAGGCGGCTCTACCACTGAA
CCAGCGTGCAATACGgtatgaatatctttcttgaggtctttctcttcttt
tccccgtccgcacgtgtttgcttctttccagctggcacattttcttattt
tcctctcccccttccctttctccctcttttaccacctttcttgagacttt
cttcttttcccagtccgcacgtgtatgcttctttccagctggctcatttt
ctctccctcccccccttccctccctccctgttttaccaccggcacccaca
ccatttttgaccataccctccgtccctccgtccatctctccctccttccc
acctccagTCCATTGACCTCTCAAGTAATTCACGAGCTCACCCGGACTCT
CCGTGCCTGCGCCAAGCTCGAACCAACCATAAGCAGCAGCAGCAGCAGCA
GTAGCCACCTTGCAGGGACAGAGGGAGGAAATGAAAGACGGAAAGACGTC
GTGGCTTGGATTGCATATTCCTCATGGGTGACAGAGGCTTGGCGTGTGTT
GCAGTGGGGTGAGGCGACAGCTCATCTTTTCTGGGAGATGCTCCATCTCT
TTGCTCCCTCTGCCCCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCCCCTCTACCGAAAGCAAAGATGAGGGAGGAGGGGAGGG
AGGGAGGGTGGCATTGACAGAACTGTGTTTGTTTTTGTGGTTGCATCTTC
CTGGCGCCCTCACCAAGGTCTCGACTCATCCAGCGACCTACAACGTAATT
TGGCCGCCAGAACAGCAGCAGCAGCAGCAAAACGGGGCGgtagggatggg
tggaaatggaaatgggagggaaggagggagggaaggaggtttacatcaat
cgcagttgccttcagcaggaagcttgaatgccccgctttcaatgcgaagc
aatgggagggagggagggagggagggagggcagcctcttcactcctcccc
tgtccccgtccacgcatccaacttttccaaccactcgtcatccgcttccc
ccccccgcccttctcctcctccccctcctccccctcctccttctcctctc
ttccgacctctccgtgttcccctgccgagaaaggaggcatctccatgacg
attccgatcccggggagccacggagggagggagggagggagggagggggg
attgtcaatgatgatgtcgacaccgacgcctatgcatactcctgtggggg
gggagggagggaaggtggaatgttgggagggacaagcccgatgagtcctc
gatcgtattttcagATCCAGAACGAGATTAAGGCAGAAGCTTATCATGTG
TCCTTTATGAAAAAGCATTTCAAAGATATGTTAATGGACATGCACCAGGT
GCTGGTGGTCGAGGGAGGGAGGGACGGAGGGAAGCAGGGTGAGGCACAGG
AGTGGCTTTTGGCGAGGGGAACCTATGTGGGGAGTGGTGGCGGAAGAGGG
GGGCATGGGAGGGAGGGAGGAGGGGATGAGGTGGATTGCTGGCCGGCGCC
AGCGTCCAGGGAGAGTAGTAGTAGTGGGGGAGGAAGGGAGGGAGGGAGTG
GGGGAGGGAGTGTGGGAGGGATGGATATGAGGGTGACGAGGAGAGAGCTC
GACGCGCTGGGATTTTTATTGAGTGGAGGGGAGGAAGGGATGGAGGGAAG
GCAGGTAAGACGGTTGTCTTCCCTTGTCCCCTTCTGGCGCAAGGAGGACG
AGGAGGAGGAGGAGGAGGAGGAGCAGGAGGAGGAGGACGGAGAGAGAGAG
GAGGAGGAAGAGGAAGAGGAGGAGGAAGGCTGCGCGTACATCCTTCTCCA
CTCATGGCTCGAAGACGTTTTATGCGTGAATCAAGCCCTGTATCCTCCCC
CTCCCGATCCCTTCGTCGGCCTTCCCCCTCTTGAACGACAAGCCATAAAC
AGCCTGTCTCTCCCTCTCCCCATGCCCCCCCTCCTGCCCGACGCCCCCCT
CTCTTTCCATCATCACAAGCCCACCAGCCATCCAAGTACTGCTGCTGCTG
CCGCGGCTGCCTCAGTCTCCCCCGGCCTCCCTCCTGCCCTCCCTCCCTCT
TCCCGCCGCAAACGCCGGCAGGTCTACCCCCACCCACCCCTCCTTCCTCT
TGTCATCACTGCGCTCAATCATGGCACTATCCTCCATGACACCTCTCTCT
CTTTCCCCACTTCTTCCTCCTCCCCCTCCTCGTCCTCTGCGTCGTTCGAC
CCCTTCCTCTCCACCGTCCCCCCTCCCCCCCTCCCCCGGTCCCTCCCCCT
TCGTCGTGTCTTCATCCAAGCCTGTCATGATGCGAATATTTATCTACTTG
GGCCTATGGAAGGTGCTCATATCGCCGCGTGTACAGACAGCACCATCGTC
CTCGGCGCAGTGTCTGgtatgtcctccctccctcccttcttccccccctc
cctcccttcctttctccctatactgcgaaagcctgtgaaatacaggacgc
aattattatagcgtggattcggctttggattgtggattcagtaattattt
cttatattcagtcattggttgcttgattgatttacagatcattcaccata
ttacaattacctatgtgccttcaccctacagGGCTGGTGCGCGTGAGCAA
CTGCGAGCGTCTCACTCTGGTGTGTGCTGGTCGTAGGCTGGTCATCTGCA
ACTGCCTCGATTCGATCTTCCCGGTGTATCTCTCCCTCCCTCCCGTCCTC
GCAGGCGACAACAGGGGTTGCCGCCTGGCCCCATATAACACAGCCTACCC
CTCTCTCGCCCACGATCTCGCCGCTGCCGGCCTTTGGTCGGTGGCGAAGG
AAGGGAAGGGGCAGGAGCTGCAGGAGCTGCAGCCAAATCAGTGGAATGCG
CCGTTGGATTTGGCCGCGGGAAATTATGCAAAGGGAGGAGGAGGGGAGGG
AGGGATTGGGGTAGTAAGGGAAGGGAGCAGTGGTGGTAGTGCGGGAGGGG
GAGGGATAGGAGGAGGAGTGTCTCCTTGCTCCAGTCCCGGACCAGAGAGC
GGAGGCAGCAGAGGAGGGGAGAGTCTGATTCTTGCCCCAGAGCTGTACTA
CACCCTTTCCATCCCTGTCTCTCTCCCTCCCTCCTTCCCTCCCTGCTCCA
CTGCTCACCCCGACCATCCGATGGAGGGCGGCATTGGGGGTCTCCGCTTC
TCGCCCTCCCTTCTTCCGGCCCTGTACCGGAACCCATTTCCTCTCCCGTT
AGAATACGCCTCCGTTCTTCGCGAACGATCCACGAACCTTGATAGGCTAC
AGCAATCTGTTTTGGGTTCGCTAACGGTCGATCAACGGCCGGGGGTAGAA
ACTGTGGTTGTCAAgtaagccctcctttcgtccctctctctttccctccc
tactttttcctgtcctgcagcagttcgtccttacattttgctcttttttt
catttttatattttattttattttttattttaaattgtgaattccctttc
tcacgtccatctcactttctctctctctctcttcctttccttccccagTA
AATTTTATGAGTGGCTGGCTGCTTCGGGGAACCTTCGCCAGGTTCTTGAT
TTGATCCGATTGGAAGGAAATGAACAGCTACAACGGCTGGAAGGAGGGAG
GTATGGAGGGAAGGAGGATGAGGTCGATGAAAGGGAAGACGATGTGATGG
TGGCTGGAGAGATGGAAGGGGTGGAGGGAGGGAGGGAAGGAGGGATGGCG
GCGCCGTCGGGTGGATTGATTGGAAGAATAGTTGCGGAGCACGAGCAGCA
TGCAGCGCATCACCACCAGCACTACGCTGAGTTATAGTCTCTTTGAGGGA
GGGAGGGAAAGAGGGAAGGAAGGAGGAAAGGAGGAAGGGAGGGACAGAGG
AAGTTAGGGAGACTTGCTCCTCTTTTGACAGAGGGAGTGAGAGATTTTTG
GTGGAGGAAATGATTATAGAAACATGAATGATGAAGGAGGCGAAGAAAGG
AGAATCATAGTGGAGGATGAGAAAAAAGGAACTTGGAGAGGTGGGGGGGT
CTAGGAGAAGCGGGGAAGAAGATATGATAGAGCGCGATTCACCCTCAACG
TATAGGCAGGGGGGAAAGAGATGGGGCCGAGAAGAAAGAGACATCTTCGA
TGTTGAAATCCTAGATTGTAGCCTCTCGCCAGCACTTACATACAAGTCTT
AAATACAGTTTAAGAGTGCTGCTATGTACGGGTGCGGAGTTGAACACATC
CGCTAATCAGAATACGATGGGGGGAGAACATGAAGAGGTGAGAATGAGCA
AGAGCAGTGATAAAACAACGATCACAACAAACCAAACGGAACGAAGAAGA
TCATTAAATGAGAAAATTTTGAAACGACACTTCCCCT
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protein sequence of NO18G02030.2

>NO18G02030.2-protein ID=NO18G02030.2-protein|Name=NO18G02030.2|organism=Nannochloropsis oceanica|type=polypeptide|length=795bp
MWVWLREERFEAALPLNQRAIRPLTSQVIHELTRTLRACAKLEPTISSSS
SSSSHLAGTEGGNERRKDVVAWIAYSSWVTEAWRVLQWGEATAHLFWEML
HLFAPSAPSSSSSSSSSSSSSSSPSTESKDEGGGEGGRVALTELCLFLWL
HLPGALTKVSTHPATYNVIWPPEQQQQQQNGAIQNEIKAEAYHVSFMKKH
FKDMLMDMHQVLVVEGGRDGGKQGEAQEWLLARGTYVGSGGGRGGHGREG
GGDEVDCWPAPASRESSSSGGGREGGSGGGSVGGMDMRVTRRELDALGFL
LSGGEEGMEGRQVRRLSSLVPFWRKEDEEEEEEEEQEEEDGEREEEEEEE
EEEGCAYILLHSWLEDVLCVNQALYPPPPDPFVGLPPLERQAINSLSLPL
PMPPLLPDAPLSFHHHKPTSHPSTAAAAAAASVSPGLPPALPPSSRRKRR
QVYPHPPLLPLVITALNHGTILHDTSLSFPTSSSSPSSSSASFDPFLSTV
PPPPLPRSLPLRRVFIQACHDANIYLLGPMEGAHIAACTDSTIVLGAVSG
LVRVSNCERLTLVCAGRRLVICNCLDSIFPVYLSLPPVLAGDNRGCRLAP
YNTAYPSLAHDLAAAGLWSVAKEGKGQELQELQPNQWNAPLDLAAGNYAK
GGGGEGGIGVVREGSSGGSAGGGGIGGGVSPCSSPGPESGGSRGGESLIL
APELYYTLSIPVSLPPSFPPCSTAHPDHPMEGGIGGLRFSPSLLPALYRN
PFPLPLEYASVLRERSTNLDRLQQSVLGSLTVDQRPGVETVVVK*
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protein sequence of NO18G02030.1

>NO18G02030.1-protein ID=NO18G02030.1-protein|Name=NO18G02030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=890bp
MWVWLREERFEAALPLNQRAIRPLTSQVIHELTRTLRACAKLEPTISSSS
SSSSHLAGTEGGNERRKDVVAWIAYSSWVTEAWRVLQWGEATAHLFWEML
HLFAPSAPSSSSSSSSSSSSSSSPSTESKDEGGGEGGRVALTELCLFLWL
HLPGALTKVSTHPATYNVIWPPEQQQQQQNGAIQNEIKAEAYHVSFMKKH
FKDMLMDMHQVLVVEGGRDGGKQGEAQEWLLARGTYVGSGGGRGGHGREG
GGDEVDCWPAPASRESSSSGGGREGGSGGGSVGGMDMRVTRRELDALGFL
LSGGEEGMEGRQVRRLSSLVPFWRKEDEEEEEEEEQEEEDGEREEEEEEE
EEEGCAYILLHSWLEDVLCVNQALYPPPPDPFVGLPPLERQAINSLSLPL
PMPPLLPDAPLSFHHHKPTSHPSTAAAAAAASVSPGLPPALPPSSRRKRR
QVYPHPPLLPLVITALNHGTILHDTSLSFPTSSSSPSSSSASFDPFLSTV
PPPPLPRSLPLRRVFIQACHDANIYLLGPMEGAHIAACTDSTIVLGAVSG
LVRVSNCERLTLVCAGRRLVICNCLDSIFPVYLSLPPVLAGDNRGCRLAP
YNTAYPSLAHDLAAAGLWSVAKEGKGQELQELQPNQWNAPLDLAAGNYAK
GGGGEGGIGVVREGSSGGSAGGGGIGGGVSPCSSPGPESGGSRGGESLIL
APELYYTLSIPVSLPPSFPPCSTAHPDHPMEGGIGGLRFSPSLLPALYRN
PFPLPLEYASVLRERSTNLDRLQQSVLGSLTVDQRPGVETVVVNKFYEWL
AASGNLRQVLDLIRLEGNEQLQRLEGGRYGGKEDEVDEREDDVMVAGEME
GVEGGREGGMAAPSGGLIGRIVAEHEQHAAHHHQHYAEL*
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Synonyms
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