NO18G01970, NO18G01970 (gene) Nannochloropsis oceanica

Overview
NameNO18G01970
Unique NameNO18G01970
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6167
Alignment locationchr18:603796..609962 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:603796..609962 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO18G01970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR046ncniR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004050NSK004050Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G01970.1NO18G01970.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|568863gene_8888Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G01970.1NO18G01970.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G01970 ID=NO18G01970|Name=NO18G01970|organism=Nannochloropsis oceanica|type=gene|length=6167bp
ATGGCAGCATCCTTCTCAGGAGAGGGAGGGGGGGGACCTCCGGAACCTCC
ACCTTCCTCCTCCCTCCTTCTTGACGACGACGAGGCTGACTTGCTGTTTG
GGTTGGACGAGGGGCTATATGGGATAAGTGGTGTCGGTGGCGATGATTTT
TTGGGCGGAGGAGGACTGACTGAAATGGAAATGGAAATTCTTTTGGGAGG
AGAAGGAGAAGGAGGAGGAGAAGCAGGTAGAGGAGGAGGAGGAGGAGGAG
GTGTGGGGGAGGCATTGGGAGGGATCGGAGGAAGAAGAAGAGAAGGAGAA
GGGATGCCGTTGGAACGGCAGCGTTTTCAGCAGCAATGTTTACAGCAGCA
GCAGCAGCAGCAACAACAACGGGGGCGGTCTCCTCAGCCTTTCTCTCAAG
CTCAGAACATAGACAGTGCGGGCAGCACCAACAGTGCGAACACTAAGAAA
GAGGGAGCTGCACTTCCGAAGGGAAAGCCATCAGCAGCAGGAGGGGGGAG
GAAAGCGAAGGGAGGAGCAACAGCAACAACAGCATCAGCAGGTCGCATGC
CAACCCCTCCTGACAGCGGGTCCATCCCTTCGTCCTCCTCCTCTCCTACT
CACGCATCTTTCTCGTCATCATTGATGCTTGGGGAGAGTGGCACCTTCTC
TGTCTACCCAGGAGAGGGAGACCCACAGCAGCAACAGCAGCAACAGCAGC
AGTGGTTGAGAGTCTTTCCAGCAGCAGCAGCACCACCAGCGGCAGCAGCA
ACAGCAGGAGCGGGAGTGGTGCCGGTTGTTATTAAAAAGCCGCGTAAAAG
AAAAGAGAAGAGCGAGGGCGGAGCAGCTGCTGGTGGGAGCAAGAAACAAG
CTAAAGCAGGGAAAGGAGCCAGAGGAGCAGCAGGAGAAGGAGGAGTAGAA
CAAAGGGGAGGAGGGGGAGAACGAGGGAAGGATTTTTTGACAATGATGTC
CTCTATCCAGACATTGGCGCCACAACCATCTTTATTAGATGCCACAGGAG
GAGAGAGGGGAGGGACAGAGGGAGGGCTGATGGCGAGCTTTTCGTCGTTA
GACTCGTCAGCCGTAATGAGTGTCGGAAGTACAAGCAGCAGCAGTACCAC
TGCTCCCAAGGAGAAAATCAAGAAACAGCCACAACCACGGAAGAAAGCTC
AGGGCAAGGCTGCAGCAGCAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGA
GGTCTAGTGCCCCTCGCCCCACGCCCAGCAGAAGCAGCACGCGCACCGTT
CCTTCACCTTCAGCAACAGCCATCACTCCCTCCACCTCCATCCGTCCCCA
AAACCCTCTCCGCCTCTGTCCCCATGCTCCACGCCGCCGCCTCCCACCTG
ACTCCTCCCACCTTCCACCCCTACCTCCCCCTCCCCCCCACCTTGTCTCC
CACCGAACTCCGCAACCCGTCCTTCCTTCGCACGCTCCGCCACTTACTGA
GGAACAGGGAATTGAACTTACCACCCGTGGGACACCCGCACAGGGAACTC
TTGTGCATGGATTTGAAACGCGTGATGGATCTAGCCAGGGCCCAGCAGCG
GTATGTGGAGCAGCAGGTCTCGTTGTTGGATGCCTGGTCTGGGCAAGTGA
GATGGGTGGCGGGAGGAGAAGCAGGGGAAGGACGGGGCATGCAGCAGCAG
CAGCGGCAGCAGCAGCGGCAGCAGGAGCGGCAGCAGGAGCAGCAGCAGAA
TCAGCAGGAGCAGCAGCGGCAGCAAGGGAGAGGAGTCAGGACGGGAGAAA
CGGGAAGAGTGGAAGGAAGGAGGGAGGGAGGGGTGTGTGGTATGATGTCG
TCGTTACCGGCGGAGTTGATGGATATGCTTTTTGATGAGAACGATGACAA
CCATGCTATGCTAGAAGGATTGCTGGAGGATGAGGATGAATGGGAAGTGG
GGGGGGAGGAAAGGCTGCTTCAGAAGCAGCAGGTGCCGGGGGAGGAAGGG
AGGAAGGGAGGGGGAATGATGTTGCCAGGGATAGGGGGGGTGCACGAGGT
TATGACTGAGGGCCCTCTCCCTCCTGCTCTTTCCTCGTCCTCTTCTTCCT
CCTCCCCCTCTTCCCCTTTAGGAAGAGGGGAAGGGCGGGGAGGAGGGGAG
GGAGGGGGAGAGAAGGGAGGGATACGTCTATACGAAAGGCTGGTGAAGGT
GAGGATACGCTGTGATTCCATCCCTCCCATGAAGAAGGAGAGGGCTGTTT
GTGCCAAGTACTGGTCCAAATTCCCTCCCTCCTCCCCCACTTCCTCGTCC
TCGTCCTCCCTTCCTTCCTTACCACTACCCCTCGGGCATGTGATTAAGGA
CACTGACAGCAGGTATTGGAGTCCTGGCCTCTTTCCGCAGCAGCAGCAGC
AGCAGCAACAACAGCAGCAACAACAGCAACAACAACAGCATATAGCAAGC
CACCTATCGGGAATAGCGGACAAAGGGAGGATGGTGAAGCAGCAACACCA
ACAAGGACCGTTGTTACAGCAGCAGCAAGAGGAGGAGGACGAGGAGGAGG
TTCTACCCTGCCTGAGCATGCGTGATGTCCCTCCTCCTTCCGCGGGCACG
ACCAAAAGCCGCAAAAAATACAAAAAAAACGACCCAAGGCCATTACATCT
CCCTTCCTCCCTCCTTCCCTCCCTCCCCCCATCTATCGAAGATGTGCCCT
TCTACGACCGCCTAGATGCCTATGCAGATTTTGATTTCAACCTGCGGAAT
CTCTGGCTTTTTGTAGACGAAGCAGGCTTCCTCACTCCAGCCCTCGTCCT
TCTGTCCCCTTCAGCAGCAGCGGCAGCAGGGAGAGGAGAAGGAAGTGAAG
GGGTGATGAAGAGGGAACTGGAGGCGATGGTACCGTTTGAGGGGGAGGGA
GGGAGGGAGGGAGAAGGAATCCTGGAGCAGAAAGACTCGATTTTGAGGGA
CGTGGGAGCGGAGTATGAAGAGGTATTGTTGGCAGTGCTGGGGAGGGAGG
ATAGATGGGAGAGGGGGAAGGAGGATGGAGGGGAGGAGCAGAACATAGAG
CTGATGGCATTGAAGAGATCTGCAAAAAGGGATAGGTGGGGGGGGAAGAG
GACAGACAAAAACAAAGAGAGAGAGAAGGAAAAGGAGAATGAAAACCGCG
ATATCGAAGTTGAGGATGAAGAAAAAAGAGAGGAAGCGAAGGAGGGCGTG
TGCAGTTTTTTGACGGAGAGCGAGAGGGAGGGGTTGGAATGGGCTGAAAG
CGGGTACAAAACGGACCTTGGACCACACCCCCTCTTTCGCCGTCTTCTTT
CGGCCTTCGTCCACCCTCTAAAACTGCACCCTCTGCCCTCTTCACCATCA
GAAGAAGGAGCAGCAGTAGCGGCAGCGGTTGTGGAAGAAGAGGAGGAAGA
AATGGCAGGAGAGGAGGAGGAGGCGGAGGAAGACAAAGGGAGGGGGATAA
AGAAGCGGAAGAGTTCTAACAGTGATATGGAGGAAAGTCCGGTAGAAGAA
AAGGAAGGGAGCGCCTTGCCTCCTTCTCCTTCGCCCCGGAAAAAGCGAGC
TGTAGCACAAGAGGAGAAGGAGAAGGAGAGGGAGGAGGAAGGGAAGAAGG
AGAAGGAGAAGGGGGAGGAAGGGCAGGTGGAGAAAGATGAGGATGAGGAG
GAAGAGAAAGAGGTTGAAGACGAGGAAAAGGATGAGGTGAAAGAAATGAA
GGAGGGGTTTCCCGGCACAAAGCTGTCTTCCATTCCTATTTCTCCTTCTC
GACCCACCAGTGCTGGTGCTGGTGGTGCTGCTGGTGCTGGTGGTGTTGCC
GGTACTGGTGCCGGAACTTCTCCTACCACACCTAGTGCTGGCGAAGAAAA
AGAAGGAGGAGAGGCTCAGAAGGAGAAGGAAGGAAAGGCAGCCCCGCACC
GCTCGAGCTTCACCTTCCCGCCCCCCAGCACCACCAACAGCAACAATAGC
ATTACGAAATCTCAAGCACCAGCGCCATCACAACCACAACAACAACAACA
AGAACAAGAATCACCACCACCACCACTACTGCCACCCTATTCTCCCTCCT
GCCTTCTCCAAAAACGCCTCCCTTACTCCTCCCCCCGCACCCCTCGAGGC
CGCAACACCCTTTTCTTTGACCATCATCTTGTCCGCAGCAAGCTCGACGA
TTGCCTCAGCGAGGAGCTCGAATCAATAGGCATGTGGGACCGATCGGATA
AAGAGCGTGCCCTTCGGCATTTTCTCCGTACACTTGCCATGCAACAGCAG
GGAGGGAGGGAGGGAGGGGAGGCAGCGGTGTTGGAGGCAGAGATTGGTTT
AGGATTGAGGCAGGACGAGAGGCGGGTGAAGAGGATGGAAGAGGAAAATA
ATAAAAGAATCGCGAAATTGAGAGAGAAGATTCTGGTAGCTGTTGGGGAG
GAGTTGAAGTACAAAGCGCTCCATCCCTACCCTGAGAACGAGGTCTTAGA
AAGGTACAAAAAGTACTTGAAACGAAAAGATAAATCAGCGGCAGCAACGA
CAACAGTTGTAGGAGTAGCAGCAGTACCGGGAGCGGCAGCAGCGGGGGTG
GTTAGGAAAGAGGAAGGAAGTGATGAAAGGGAGGTTGAGGGGGACAGGGT
GGGCGTGGTGAGACTGACGGAGGGGAACCATGGAAAGGTGGAGAAACATA
TGAAGGAAAAGAAGGAGAGAAAGAAGGTGGGGACAACTTCAGCTGCGGCA
GCGCCCGCTGCTGGTGGTGGTAATCGGAGTGGTGTTGGTGGGATGGTTGT
GAAGGAGGAGAAGGAGAAGGGTAGTAAGAAGGGGTCAGGGAGCAAGGCGG
CGTCCACAGATTCCTCATCCACGGTGAAGATCGAAGAAACAGCAGCAGCA
GCTGCAGCAGCACCGCCAGTGCCAGGGAAGGGTCGGGCAAGTAGTGGGAA
GCAAGGGAAGCAGGCACTAGCGGCAGCCGCAGCAGCTACAGGTAAAAGCG
ACAAGCCGACTGCGGCCCGTAGCCATAAGAAGGGTGCAGCAAAGGCAGCA
GTAGCTGCTGCTGCCGCGGCGTCTGGTGGGAGGGAGGGTGGGAACGGTGC
GGGTGGGGAAGGCTATGGGTTGCATCTGCCGTCCACGTCGTCGAGCGGGA
GCAGCACTAGCAGCAGCAGCGGAGCGACTATGATGATGATTGGCAACAGC
ATCAGCAGCAACAGTAGCGGCAGCAATGGAGGGGAGGTGTCAAAGGATGG
ACAAATACAACAGCAGCAGCAGCAGCTTTTACCGTCGTTGCACATCCCTT
ATCCTTTTCCCTCATCACTTGACGGGCTCGGAGAAGGGATAGGTGGAGTA
AAAAAGACGAGAGGACAAATTGGGCGAGGGATGGGGGAAGCTATGAGTGG
ATGGATGGGAGGAGATTGCAGAACGGGAGAAGGGAGGAATGGAGGAGAAA
TGGGAGGAGGGGGAGGAATTGTGGGAGAAATGGAGAGGGGGATGACGGAT
GACTTGATGGGAGGAGAGCATTTAATTGACCCCGATTCTTTTTTTTCTCC
AATGTCTCAAGGAGATCTGATCTCGGCGTTGGGGATGGATGATTTATGGT
AGAGGGAGGCAGGGAGGGAGGAAAGGGGGGGATGGATCACGTGTGACATA
GTGAACAGATGTAGTACAAAAAGCTGTGTGTGCGTGTGATTGATACTCGT
ATGCCACAGACGAATAAGAACAAAGCAGGAAAGAGAGAAACGGAGACGAG
AAGACATAGAGGTTTGTAATCACTTGAGAAAGAGCAGTGCGAGTCATATT
GGATGACGTGTAGGCAAATAGATAAGACCGTACCGTGGCAAGTGTTTAAG
TGTACACAGCAATTAAGAAGAGGAGGGCCACGAGAGAAAGGTGCGTGAGT
GAACGCTACGTGGGTGTGTGCTTTTCAGACGGAACGATACAGCGATGTTA
CCCCAAAAAAAAGAAGACACAGAACAAGGAGGAGGAGGAGAACGAATTGG
ATGGAGAGAAATAAAGCCATTGCAAGTGTTTGAGGAAAGCAAATCGCAAG
GTAGAAGTAGACGAGAGGAAAAAGAAGGAAAAAGAGGACGCAAGGGTTTC
GCCAAGGGGCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAGAAGG
AGAAGGAAGGATACAAAAAGATTCTATGTTGACATCAAGACCAGCCGCAT
CACATGCACCAAACAAGTTTCAAACTATCACAGGCGAAGAAATAACATGT
AACGGATAATCAAGAAT
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protein sequence of NO18G01970.1

>NO18G01970.1-protein ID=NO18G01970.1-protein|Name=NO18G01970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1834bp
MAASFSGEGGGGPPEPPPSSSLLLDDDEADLLFGLDEGLYGISGVGGDDF
LGGGGLTEMEMEILLGGEGEGGGEAGRGGGGGGGVGEALGGIGGRRREGE
GMPLERQRFQQQCLQQQQQQQQQRGRSPQPFSQAQNIDSAGSTNSANTKK
EGAALPKGKPSAAGGGRKAKGGATATTASAGRMPTPPDSGSIPSSSSSPT
HASFSSSLMLGESGTFSVYPGEGDPQQQQQQQQQWLRVFPAAAAPPAAAA
TAGAGVVPVVIKKPRKRKEKSEGGAAAGGSKKQAKAGKGARGAAGEGGVE
QRGGGGERGKDFLTMMSSIQTLAPQPSLLDATGGERGGTEGGLMASFSSL
DSSAVMSVGSTSSSSTTAPKEKIKKQPQPRKKAQGKAAAAGGGGGGGGGR
GLVPLAPRPAEAARAPFLHLQQQPSLPPPPSVPKTLSASVPMLHAAASHL
TPPTFHPYLPLPPTLSPTELRNPSFLRTLRHLLRNRELNLPPVGHPHREL
LCMDLKRVMDLARAQQRYVEQQVSLLDAWSGQVRWVAGGEAGEGRGMQQQ
QRQQQRQQERQQEQQQNQQEQQRQQGRGVRTGETGRVEGRREGGVCGMMS
SLPAELMDMLFDENDDNHAMLEGLLEDEDEWEVGGEERLLQKQQVPGEEG
RKGGGMMLPGIGGVHEVMTEGPLPPALSSSSSSSSPSSPLGRGEGRGGGE
GGGEKGGIRLYERLVKVRIRCDSIPPMKKERAVCAKYWSKFPPSSPTSSS
SSSLPSLPLPLGHVIKDTDSRYWSPGLFPQQQQQQQQQQQQQQQQQHIAS
HLSGIADKGRMVKQQHQQGPLLQQQQEEEDEEEVLPCLSMRDVPPPSAGT
TKSRKKYKKNDPRPLHLPSSLLPSLPPSIEDVPFYDRLDAYADFDFNLRN
LWLFVDEAGFLTPALVLLSPSAAAAAGRGEGSEGVMKRELEAMVPFEGEG
GREGEGILEQKDSILRDVGAEYEEVLLAVLGREDRWERGKEDGGEEQNIE
LMALKRSAKRDRWGGKRTDKNKEREKEKENENRDIEVEDEEKREEAKEGV
CSFLTESEREGLEWAESGYKTDLGPHPLFRRLLSAFVHPLKLHPLPSSPS
EEGAAVAAAVVEEEEEEMAGEEEEAEEDKGRGIKKRKSSNSDMEESPVEE
KEGSALPPSPSPRKKRAVAQEEKEKEREEEGKKEKEKGEEGQVEKDEDEE
EEKEVEDEEKDEVKEMKEGFPGTKLSSIPISPSRPTSAGAGGAAGAGGVA
GTGAGTSPTTPSAGEEKEGGEAQKEKEGKAAPHRSSFTFPPPSTTNSNNS
ITKSQAPAPSQPQQQQQEQESPPPPLLPPYSPSCLLQKRLPYSSPRTPRG
RNTLFFDHHLVRSKLDDCLSEELESIGMWDRSDKERALRHFLRTLAMQQQ
GGREGGEAAVLEAEIGLGLRQDERRVKRMEEENNKRIAKLREKILVAVGE
ELKYKALHPYPENEVLERYKKYLKRKDKSAAATTTVVGVAAVPGAAAAGV
VRKEEGSDEREVEGDRVGVVRLTEGNHGKVEKHMKEKKERKKVGTTSAAA
APAAGGGNRSGVGGMVVKEEKEKGSKKGSGSKAASTDSSSTVKIEETAAA
AAAAPPVPGKGRASSGKQGKQALAAAAAATGKSDKPTAARSHKKGAAKAA
VAAAAAASGGREGGNGAGGEGYGLHLPSTSSSGSSTSSSSGATMMMIGNS
ISSNSSGSNGGEVSKDGQIQQQQQQLLPSLHIPYPFPSSLDGLGEGIGGV
KKTRGQIGRGMGEAMSGWMGGDCRTGEGRNGGEMGGGGGIVGEMERGMTD
DLMGGEHLIDPDSFFSPMSQGDLISALGMDDLW*
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Synonyms
Publications