NO18G01730, NO18G01730 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G01730 vs. NCBI_GenBank
Match: EWM23381.1 (hypothetical protein Naga_100472g4 [Nannochloropsis gaditana]) HSP 1 Score: 287.7 bits (735), Expect = 1.100e-73 Identity = 294/699 (42.06%), Postives = 351/699 (50.21%), Query Frame = 0 Query: 118 NLFDPRRLKEAFTALRETGASGLLAYGILNCLWYTLAVSIVWWHTSGGTITAASCSLATATAVKVG-GEA---------SLRATFRRFLKVVAIAWAGSQVTKPLRVAGAVMLAPVASRLMEWTQRRLGLKKKGDALPVLVGGLVGLTLVVFGGLILQGTVSAVLGPCWRNSATMMGRSCSGSRGVEAAAVLCRGG---------------------FCGGERGTAFALSWMRPTRVALVGALISVGIIARSSTLF----------LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVRRPKNQYLPPNPNVHGWDQHPSYLRGKWNLVELNFTAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTELQVGCKAVVMKGKSILLLREGQGSLSPLGWEFTPANRRMVFEIASSSPASYSDGRGTEGTMEEEGGQEGXXXXXXXXXXXXXXXXXVVWRFSGEVRRKPKHWCHVTGTVRVRPSSXXXXXXXXXXXXXXXXXXXXXXSPEKEGTEGGGREEGKDAATARRRPRRAIPSSSPAWPVIAAFKLEKEMTPYQPLSKWEKLLVWARLEAPRFANTKAGRKAEHYLKREGREEGAEE 776 N F RRL+ A ALRETG++GLLAYGI+N L+YT+A++I+W G S S ATA G G+A SLR RFLKVVA+AWAGSQVTKPLRV GA++LAP SRLM +T+R+L L+ K L VL+ L+ +VF GL+++ W +A M+G G++ A L RG W R RV VG+ + + A S+ LF L XXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R RRP+ QYLPPNPNVHGWDQHP YLRGKW L L+F XX L L++GCK++V+KGKS+LLLREG G LSPLGWEFTPANRR+VFE+AS S XXXXXXXXXXXXXXXX +VWRFSGEVRRKPKHWC VTGTVRVR SP + G G+ A R RR+IPS+ +WPV+A+F+LEK M P+Q L+ WEKLLVWARLEA N+KAGR+A+ + R G E G +E Sbjct: 100 NFFSLRRLRAALAALRETGSAGLLAYGIVNALYYTVAITIIWLCVDGDVEPLLSPSALGATAAAAGTGKAAMSAATSAPSLRLLSTRFLKVVAMAWAGSQVTKPLRVGGAILLAPAVSRLMGYTERKLQLRSKRQTLAVLLAALMVFPTLVFAGLLIK-------AGAWEAAAPMVG---GWGEGLKEA--LGRGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRLWKR-LRVGRVGSRLPINKSASSAPLFASLLLPAPSTLAFLQPPCPLPSFPXXXXXXXSSAPLGAGTSIRREGSCPPPVSLSFPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQRLAKRRRASDPARTKRRPRQQYLPPNPNVHGWDQHPDYLRGKWTLRSLSF--------------RPPPSDPTAHADSPSDAGGADTGEGPSLPPSPSALDVGPPPXXSLPPSVLAGLEMGCKSLVLKGKSVLLLREGMGQLSPLGWEFTPANRRVVFEVASPS-------------XXXXXXXXXXXXXXXXXXXXXXXXXRLVWRFSGEVRRKPKHWCRVTGTVRVR------------------LAPLPTSSPSSPTSHGEAGPSGERDGQAPPR-RRSIPSTKASWPVVASFELEKAMAPFQSLNTWEKLLVWARLEAD--PNSKAGRRAKASVVR-GPEGGGKE 736
BLAST of NO18G01730 vs. NCBI_GenBank
Match: ESQ52542.1 (hypothetical protein EUTSA_v10017229mg [Eutrema salsugineum] >ESQ52543.1 hypothetical protein EUTSA_v10017229mg [Eutrema salsugineum]) HSP 1 Score: 88.2 bits (217), Expect = 1.200e-13 Identity = 50/139 (35.97%), Postives = 76/139 (54.68%), Query Frame = 0 Query: 121 DPRRLKEAFTALRETGASGLLAYGILNCLWYTLAVSIVWWHTSGGTITAASCSLATATAVKVGGEASLRATFRRFLKVVAIAWAGSQVTKPLRVAGAVMLAPVASRLMEWTQRRLGLKKKGDALPVLVGGLVGLTLVVF 260 +P KE L+ G SG+L+YG+LN ++Y++A +VW++ + G+ A RFLKV+A+ WAGSQVTK +R+ GAV LAP+ R + W + + +G A +VG +GL LV+F Sbjct: 35 NPFASKELLKKLKRYGVSGILSYGLLNTVYYSIAFLLVWFYVA-----------------PAPGKMGYFAAAERFLKVMAMVWAGSQVTKLIRIGGAVALAPIVDRGLSWFTVKFKFESQGKAFGAMVGICLGLALVLF 156
BLAST of NO18G01730 vs. NCBI_GenBank
Match: XP_006411091.1 (uncharacterized protein LOC18027021 isoform X1 [Eutrema salsugineum] >ESQ52544.1 hypothetical protein EUTSA_v10017229mg [Eutrema salsugineum]) HSP 1 Score: 88.2 bits (217), Expect = 1.200e-13 Identity = 50/139 (35.97%), Postives = 76/139 (54.68%), Query Frame = 0 Query: 121 DPRRLKEAFTALRETGASGLLAYGILNCLWYTLAVSIVWWHTSGGTITAASCSLATATAVKVGGEASLRATFRRFLKVVAIAWAGSQVTKPLRVAGAVMLAPVASRLMEWTQRRLGLKKKGDALPVLVGGLVGLTLVVF 260 +P KE L+ G SG+L+YG+LN ++Y++A +VW++ + G+ A RFLKV+A+ WAGSQVTK +R+ GAV LAP+ R + W + + +G A +VG +GL LV+F Sbjct: 86 NPFASKELLKKLKRYGVSGILSYGLLNTVYYSIAFLLVWFYVA-----------------PAPGKMGYFAAAERFLKVMAMVWAGSQVTKLIRIGGAVALAPIVDRGLSWFTVKFKFESQGKAFGAMVGICLGLALVLF 207
BLAST of NO18G01730 vs. NCBI_GenBank
Match: CEM16907.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 88.2 bits (217), Expect = 1.200e-13 Identity = 57/139 (41.01%), Postives = 79/139 (56.83%), Query Frame = 0 Query: 132 LRETGASGLLAYGILNCLWYTLAVSIVWWHTSGGTITAASCSLATATAVKVGGEASLRATFRRFLKVVAIAWAGSQVTKPLRVAGAVMLAPVASRLMEWTQRRLGLKKKGDALPVLVGGLVGLTLVVFGGLILQGTVSA 271 +R G +G+L+YG+LN L+YT+AV++ W C T ++ SLR +RF+KV + WAGSQVTK LR A AVM+AP +++ TQRRL LK + A V L+G T VFG L+L + A Sbjct: 129 IRSYGLAGMLSYGVLNALYYTVAVALAW------------CCRMTCPSM---AAPSLRCATQRFVKVFVLVWAGSQVTKGLRAAMAVMIAPFVDKVLAATQRRLRLKTRERAFAVCCIMLLGGTFGVFGVLVLSSCMPA 252
BLAST of NO18G01730 vs. NCBI_GenBank
Match: XP_024003835.1 (uncharacterized protein LOC18027021 isoform X2 [Eutrema salsugineum]) HSP 1 Score: 88.2 bits (217), Expect = 1.200e-13 Identity = 50/139 (35.97%), Postives = 76/139 (54.68%), Query Frame = 0 Query: 121 DPRRLKEAFTALRETGASGLLAYGILNCLWYTLAVSIVWWHTSGGTITAASCSLATATAVKVGGEASLRATFRRFLKVVAIAWAGSQVTKPLRVAGAVMLAPVASRLMEWTQRRLGLKKKGDALPVLVGGLVGLTLVVF 260 +P KE L+ G SG+L+YG+LN ++Y++A +VW++ + G+ A RFLKV+A+ WAGSQVTK +R+ GAV LAP+ R + W + + +G A +VG +GL LV+F Sbjct: 70 NPFASKELLKKLKRYGVSGILSYGLLNTVYYSIAFLLVWFYVA-----------------PAPGKMGYFAAAERFLKVMAMVWAGSQVTKLIRIGGAVALAPIVDRGLSWFTVKFKFESQGKAFGAMVGICLGLALVLF 191
BLAST of NO18G01730 vs. NCBI_GenBank
Match: XP_006293388.1 (uncharacterized protein LOC17888215 isoform X2 [Capsella rubella] >EOA26286.1 hypothetical protein CARUB_v10024059mg [Capsella rubella]) HSP 1 Score: 86.7 bits (213), Expect = 3.600e-13 Identity = 51/145 (35.17%), Postives = 78/145 (53.79%), Query Frame = 0 Query: 115 NHRNLFDPRRLKEAFTALRETGASGLLAYGILNCLWYTLAVSIVWWHTSGGTITAASCSLATATAVKVGGEASLRATFRRFLKVVAIAWAGSQVTKPLRVAGAVMLAPVASRLMEWTQRRLGLKKKGDALPVLVGGLVGLTLVVF 260 N R+ +P +E L+ G SG+L+YG+LN ++Y+ A +VW++ + G+ A RFLKV+A+ WAGSQVTK +R+ GAV LAP+ R + W + + +G A LVG +GL L++F Sbjct: 76 NERSRKNPFVSEELLKKLKRYGLSGILSYGLLNTVYYSTAFLLVWFYVA-----------------PAPGKMGYLAAAERFLKVMAMVWAGSQVTKLIRIGGAVALAPIVDRGLSWFTVKCKFESQGKAFGALVGICLGLALMLF 203
BLAST of NO18G01730 vs. NCBI_GenBank
Match: XP_023639402.1 (uncharacterized protein LOC17888215 isoform X1 [Capsella rubella]) HSP 1 Score: 86.7 bits (213), Expect = 3.600e-13 Identity = 51/145 (35.17%), Postives = 78/145 (53.79%), Query Frame = 0 Query: 115 NHRNLFDPRRLKEAFTALRETGASGLLAYGILNCLWYTLAVSIVWWHTSGGTITAASCSLATATAVKVGGEASLRATFRRFLKVVAIAWAGSQVTKPLRVAGAVMLAPVASRLMEWTQRRLGLKKKGDALPVLVGGLVGLTLVVF 260 N R+ +P +E L+ G SG+L+YG+LN ++Y+ A +VW++ + G+ A RFLKV+A+ WAGSQVTK +R+ GAV LAP+ R + W + + +G A LVG +GL L++F Sbjct: 77 NERSRKNPFVSEELLKKLKRYGLSGILSYGLLNTVYYSTAFLLVWFYVA-----------------PAPGKMGYLAAAERFLKVMAMVWAGSQVTKLIRIGGAVALAPIVDRGLSWFTVKCKFESQGKAFGALVGICLGLALMLF 204
BLAST of NO18G01730 vs. NCBI_GenBank
Match: XP_012849935.1 (PREDICTED: uncharacterized protein LOC105969707 [Erythranthe guttata]) HSP 1 Score: 85.9 bits (211), Expect = 6.200e-13 Identity = 49/140 (35.00%), Postives = 68/140 (48.57%), Query Frame = 0 Query: 120 FDPRRLKEAFTALRETGASGLLAYGILNCLWYTLAVSIVWWHTSGGTITAASCSLATATAVKVGGEASLRATFRRFLKVVAIAWAGSQVTKPLRVAGAVMLAPVASRLMEWTQRRLGLKKKGDALPVLVGGLVGLTLVVF 260 F LKE T L+ G SG+L+YG+LN +Y +VW++ + G A RFLKV+A+ WAGSQVTK +R GA+ LAP R + W + G K +G A + G GL ++F Sbjct: 78 FQANSLKEILTKLKRYGVSGILSYGLLNTAYYLTTFLVVWFYVAPSP-----------------GRMGYLAAVERFLKVMAMVWAGSQVTKIIRAGGALALAPFVDRGLSWFTLKFGFKSQGKAFATIAGLCFGLAFLMF 200
BLAST of NO18G01730 vs. NCBI_GenBank
Match: XP_020269001.1 (uncharacterized protein LOC109844407 isoform X1 [Asparagus officinalis] >XP_020269002.1 uncharacterized protein LOC109844407 isoform X1 [Asparagus officinalis]) HSP 1 Score: 84.3 bits (207), Expect = 1.800e-12 Identity = 51/139 (36.69%), Postives = 71/139 (51.08%), Query Frame = 0 Query: 126 KEAFTALRETGASGLLAYGILNCLWYTLAVSIVWWHTSGGTITAASCSLATATAVKVGGEASLRATFRRFLKVVAIAWAGSQVTKPLRVAGAVMLAPVASRLMEWTQRRLGLKKKGDALPVLVGGLVGLTLVVFGGLIL 265 KE L+ G +G+L+YG+LN ++Y +VW SCS + K G A RFLKV+A+ WAGSQVTK +R GA+ LAP + + W + + KG A + G GL L++F GL L Sbjct: 98 KELVQDLKRYGIAGVLSYGLLNTMYYLATFLLVW-----------SCSSLRISWKKAPGRMGYAAAVERFLKVMAMVWAGSQVTKIIRAGGALALAPFVDKGLSWFTIKFNFESKGKAFAAIAGMCFGLALLLFVGLTL 225
BLAST of NO18G01730 vs. NCBI_GenBank
Match: NP_973635.2 (Gag-Pol polyprotein/retrotransposon [Arabidopsis thaliana] >AAT68740.1 hypothetical protein At2g38695 [Arabidopsis thaliana] >AAV63895.1 hypothetical protein At2g38695 [Arabidopsis thaliana] >AEC09571.1 Gag-Pol polyprotein/retrotransposon [Arabidopsis thaliana]) HSP 1 Score: 84.0 bits (206), Expect = 2.400e-12 Identity = 47/134 (35.07%), Postives = 73/134 (54.48%), Query Frame = 0 Query: 126 KEAFTALRETGASGLLAYGILNCLWYTLAVSIVWWHTSGGTITAASCSLATATAVKVGGEASLRATFRRFLKVVAIAWAGSQVTKPLRVAGAVMLAPVASRLMEWTQRRLGLKKKGDALPVLVGGLVGLTLVVF 260 +E L+ G SG+L+YG+LN ++Y+ A +VW++ + G+ A RFLKV+A+ WAGSQVTK +R+ GAV LAP+ R + W + + +G A LVG +G+ L++F Sbjct: 88 EELLKKLKRYGLSGILSYGLLNTVYYSTAFLLVWFYVA-----------------PAPGKMGYLAAAERFLKVMAMVWAGSQVTKLIRIGGAVALAPIVDRGLSWFTVKCNFESQGKAFGALVGICLGMALMLF 204 The following BLAST results are available for this feature:
BLAST of NO18G01730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G01730 ID=NO18G01730|Name=NO18G01730|organism=Nannochloropsis oceanica|type=gene|length=2440bpback to top protein sequence of NO18G01730.1 >NO18G01730.1-protein ID=NO18G01730.1-protein|Name=NO18G01730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=793bpback to top Synonyms
Publications
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