NO18G01720, NO18G01720 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G01720 vs. NCBI_GenBank
Match: EWM23378.1 (proteasome ( macropain) beta 6 [Nannochloropsis gaditana]) HSP 1 Score: 418.7 bits (1075), Expect = 1.100e-113 Identity = 207/220 (94.09%), Postives = 212/220 (96.36%), Query Frame = 0 Query: 1 MAMPSQGLEQSMRLKPGEVATGTTIMAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQALSDYVRYFLASHSIDLGRAPAVSTAAKLMSTMIYRNKDNLMAGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKEQMTREECQAFVKKAISHAMARDGSSGGVIRMVTIDKSGVAREFIPGDKLPYGP 221 MAMPS LE SM LKPGEVATGTTIMAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQAL+DYVRYFLASH+IDLGR PAV TAAKLMST+IYRNKDNL+AGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKE MTREECQ FVKKAISHAMARDGSSGGVIRMVTIDKSGV+REFIPGDKLPYGP Sbjct: 1 MAMPSTSLEHSMGLKPGEVATGTTIMAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQALADYVRYFLASHAIDLGRTPAVYTAAKLMSTLIYRNKDNLLAGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKENMTREECQNFVKKAISHAMARDGSSGGVIRMVTIDKSGVSREFIPGDKLPYGP 220
BLAST of NO18G01720 vs. NCBI_GenBank
Match: XP_005852420.1 (20S proteasome subunit beta 1, partial [Nannochloropsis gaditana CCMP526] >EKU23412.1 20S proteasome subunit beta 1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 359.0 bits (920), Expect = 1.100e-95 Identity = 178/190 (93.68%), Postives = 182/190 (95.79%), Query Frame = 0 Query: 1 MAMPSQGLEQSMRLKPGEVATGTTIMAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQALSDYVRYFLASHSIDLGRAPAVSTAAKLMSTMIYRNKDNLMAGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKEQMTREECQAFVKKAISHAMARDG 191 MAMPS LE SM LKPGEVATGTTIMAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQAL+DYVRYFLASH+IDLGR PAV TAAKLMST+IYRNKDNL+AGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKE MTREECQ FVKKAISHAMARDG Sbjct: 1 MAMPSTSLEHSMGLKPGEVATGTTIMAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQALADYVRYFLASHAIDLGRTPAVYTAAKLMSTLIYRNKDNLLAGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKENMTREECQNFVKKAISHAMARDG 190
BLAST of NO18G01720 vs. NCBI_GenBank
Match: CBJ30643.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 333.2 bits (853), Expect = 6.200e-88 Identity = 156/207 (75.36%), Postives = 183/207 (88.41%), Query Frame = 0 Query: 14 LKPGEVATGTTIMAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQALSDYVRYFLASHSIDLGRAPAVSTAAKLMSTMIYRNKDNLMAGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKEQMTREECQAFVKKAISHAMARDGSSGGVIRMVTIDKSGVAREFIPGDKLPYGP 221 LK GE++TGTTIMAV++DGGV++GADSRTSTGTYVANRVSDK+T+LH HIY CRSGSAADTQA++DYVRYFLASHS++LGR P V TAAK+ + Y NKD L+AG+II GWDP DGG VY + LGGT+ +QKF+IGGSGSTYIYGHVD AFKE MT+EE Q FV+KAISHAMARDGSSGGVIRMV IDK+GV+ E+IPGD+LP+GP Sbjct: 12 LKDGEISTGTTIMAVQYDGGVIMGADSRTSTGTYVANRVSDKITSLHDHIYACRSGSAADTQAITDYVRYFLASHSVELGRLPLVKTAAKMARGLCYNNKDRLLAGMIIAGWDPVDGGTVYEIPLGGTMMKQKFAIGGSGSTYIYGHVDAAFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSCEYIPGDQLPFGP 218
BLAST of NO18G01720 vs. NCBI_GenBank
Match: CCA15808.1 (proteasome subunit beta type6 putative [Albugo laibachii Nc14]) HSP 1 Score: 302.8 bits (774), Expect = 9.000e-79 Identity = 144/205 (70.24%), Postives = 170/205 (82.93%), Query Frame = 0 Query: 14 LKPGEVATGTTIMAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQALSDYVRYFLASHSIDLGRAPAVSTAAKLMSTMIYRNKDNLMAGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKEQMTREECQAFVKKAISHAMARDGSSGGVIRMVTIDKSGVAREFIPGDKLPY 219 LK GEV GT+I+AV+FDGGVVLGADSRTSTG YVANRVSDKLT LH IYCCRSGSAADTQALSDYVRYFL+SHS+D+G+ P V TAA L ++ Y NKD L+AG+I+ GWDP GGQVY++ +GG + +Q F+IGGSGSTYIYG VD A++ MT+EECQAFVKK ++HAMARDGSSGGVIR VTI K V REF G++LP+ Sbjct: 10 LKNGEVDAGTSIIAVKFDGGVVLGADSRTSTGAYVANRVSDKLTGLHDRIYCCRSGSAADTQALSDYVRYFLSSHSLDVGKLPKVHTAANLFRSLCYNNKDRLLAGIIVAGWDPVHGGQVYSIPIGGAMVKQNFAIGGSGSTYIYGLVDAAYRPDMTQEECQAFVKKMLAHAMARDGSSGGVIRTVTITKDSVTREFTSGEQLPF 214
BLAST of NO18G01720 vs. NCBI_GenBank
Match: CCI46756.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 302.4 bits (773), Expect = 1.200e-78 Identity = 144/213 (67.61%), Postives = 173/213 (81.22%), Query Frame = 0 Query: 6 QGLEQSMRLKPGEVATGTTIMAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQALSDYVRYFLASHSIDLGRAPAVSTAAKLMSTMIYRNKDNLMAGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKEQMTREECQAFVKKAISHAMARDGSSGGVIRMVTIDKSGVAREFIPGDKLPY 219 Q + + LK GE+ GT+I+AV+FDGGVVLGADSRTSTG YVANRVSDKLT LH IYCCRSGSAADTQALSDYVRYFL+SHS+D+G+ P V TAA L ++ Y NKD L+AG+I+ GWDP GGQVY++ +GG + +Q F+IGGSGSTYIYG VD A++ MT+EECQAFVKK ++HAMARDGSSGGVIR VTI K V R+F GD+LP+ Sbjct: 2 QDINAASFLKNGEIDAGTSIIAVKFDGGVVLGADSRTSTGAYVANRVSDKLTGLHDRIYCCRSGSAADTQALSDYVRYFLSSHSLDVGKLPKVHTAANLFRSLCYNNKDRLLAGIIVAGWDPVHGGQVYSIPIGGAMVKQNFAIGGSGSTYIYGLVDAAYRPDMTQEECQAFVKKMLAHAMARDGSSGGVIRTVTITKDCVTRDFTSGDQLPF 214
BLAST of NO18G01720 vs. NCBI_GenBank
Match: GAX98438.1 (proteasome subunit beta type-6, putative [Pythium insidiosum]) HSP 1 Score: 302.4 bits (773), Expect = 1.200e-78 Identity = 143/211 (67.77%), Postives = 174/211 (82.46%), Query Frame = 0 Query: 8 LEQSMRLKPGEVATGTTIMAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQALSDYVRYFLASHSIDLGRAPAVSTAAKLMSTMIYRNKDNLMAGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKEQMTREECQAFVKKAISHAMARDGSSGGVIRMVTIDKSGVAREFIPGDKLPY 219 +++ LKPGE+ GT+I+AV FDGGVVLGADSRTSTGTY+ANRVSDKLT LH IYCCRSGSAADTQALSDYVR+FLASH++DLGR P V TAA L ++ Y NKD L+AG+I+ G DP GGQV+++ +GG + Q F+IGGSGSTYIYG+VD A++ MT+EECQ+FVKKA++HAMARDGSSGGVIRMVTI V REF+ G +LP+ Sbjct: 5 VDEGSFLKPGEIDAGTSIIAVRFDGGVVLGADSRTSTGTYIANRVSDKLTPLHDRIYCCRSGSAADTQALSDYVRHFLASHAMDLGRRPKVHTAANLFRSLCYNNKDRLLAGIIVAGVDPVKGGQVFSIPIGGAMVEQDFAIGGSGSTYIYGYVDSAYRPNMTKEECQSFVKKALAHAMARDGSSGGVIRMVTITADDVVREFVSGTELPF 215
BLAST of NO18G01720 vs. NCBI_GenBank
Match: XP_008900536.1 (hypothetical protein PPTG_07910 [Phytophthora parasitica INRA-310] >ETI53752.1 hypothetical protein F443_03356 [Phytophthora parasitica P1569] >ETK93633.1 hypothetical protein L915_03223 [Phytophthora parasitica] >ETL47028.1 hypothetical protein L916_03189 [Phytophthora parasitica] >ETM00126.1 hypothetical protein L917_03124 [Phytophthora parasitica] >ETM53307.1 hypothetical protein L914_03210 [Phytophthora parasitica] >ETN14280.1 hypothetical protein PPTG_07910 [Phytophthora parasitica INRA-310] >ETO82441.1 hypothetical protein F444_03423 [Phytophthora parasitica P1976] >ETP23561.1 hypothetical protein F441_03340 [Phytophthora parasitica CJ01A1] >ETP51572.1 hypothetical protein F442_03322 [Phytophthora parasitica P10297]) HSP 1 Score: 300.8 bits (769), Expect = 3.400e-78 Identity = 142/216 (65.74%), Postives = 174/216 (80.56%), Query Frame = 0 Query: 3 MPSQGLEQSMRLKPGEVATGTTIMAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQALSDYVRYFLASHSIDLGRAPAVSTAAKLMSTMIYRNKDNLMAGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKEQMTREECQAFVKKAISHAMARDGSSGGVIRMVTIDKSGVAREFIPGDKLPY 219 M Q +++ LKPGEV GT+I+AV F+GGVVLGADSRTSTGTYVANRVSDKLT LH ++CCRSGSAADTQALSDYVRY+L+SHS++LGR P V TAA L ++ Y NKD L+AG+I+ GWDP GGQV+++ +GG + Q F+IGGSGSTYIYG VD ++ MT+EECQ FVKKA++HAMARDGSSGGVIR VTI ++ V R+F GD LP+ Sbjct: 1 MTKQEVDEGSYLKPGEVDAGTSIIAVRFNGGVVLGADSRTSTGTYVANRVSDKLTPLHDRLFCCRSGSAADTQALSDYVRYYLSSHSVELGRLPKVGTAANLFRSLCYHNKDRLLAGIIVAGWDPVKGGQVFSIPIGGAMVEQDFAIGGSGSTYIYGLVDSEYRPNMTKEECQQFVKKALAHAMARDGSSGGVIRTVTITENEVVRDFTSGDDLPF 216
BLAST of NO18G01720 vs. NCBI_GenBank
Match: XP_002901169.1 (proteasome subunit beta type-6, putative [Phytophthora infestans T30-4] >EEY59155.1 proteasome subunit beta type-6, putative [Phytophthora infestans T30-4]) HSP 1 Score: 300.4 bits (768), Expect = 4.500e-78 Identity = 142/216 (65.74%), Postives = 174/216 (80.56%), Query Frame = 0 Query: 3 MPSQGLEQSMRLKPGEVATGTTIMAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQALSDYVRYFLASHSIDLGRAPAVSTAAKLMSTMIYRNKDNLMAGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKEQMTREECQAFVKKAISHAMARDGSSGGVIRMVTIDKSGVAREFIPGDKLPY 219 M Q +++ LKPGEV GT+I+AV F+GGVVLGADSRTSTGTYVANRVSDKLT LH ++CCRSGSAADTQALSDYVRY+L+SHS++LGR P V TAA L ++ Y NKD L+AG+I+ GWDP GGQV+++ +GG + Q F+IGGSGSTYIYG VD ++ MT+EECQ FVKKA++HAMARDGSSGGVIR VTI ++ V REF G+ LP+ Sbjct: 1 MTKQEVDEGSYLKPGEVDAGTSIIAVRFNGGVVLGADSRTSTGTYVANRVSDKLTPLHDRLFCCRSGSAADTQALSDYVRYYLSSHSVELGRLPKVGTAANLFRSLCYHNKDRLLAGIIVAGWDPVKGGQVFSIPIGGAMVEQDFAIGGSGSTYIYGLVDSEYRPNMTKEECQRFVKKALAHAMARDGSSGGVIRTVTITENEVVREFTSGEDLPF 216
BLAST of NO18G01720 vs. NCBI_GenBank
Match: OWZ11183.1 (Proteasome subunit beta type-6 [Phytophthora megakarya]) HSP 1 Score: 300.4 bits (768), Expect = 4.500e-78 Identity = 143/217 (65.90%), Postives = 174/217 (80.18%), Query Frame = 0 Query: 2 AMPSQGLEQSMRLKPGEVATGTTIMAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQALSDYVRYFLASHSIDLGRAPAVSTAAKLMSTMIYRNKDNLMAGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKEQMTREECQAFVKKAISHAMARDGSSGGVIRMVTIDKSGVAREFIPGDKLPY 219 AM Q +++ LKPGEV GT+I+AV F GGVVLGADSRTSTGTYVANRVSDKLT LH +YCCRSGSAADTQALSDYVRY+L+SHS++LGR P V TAA L ++ Y NKD L+AG+I+ GWDP GGQV+++ +GG + Q F+IGGSGSTYIYG VD ++ MT++ECQ FVKKA++HAMARDGSSGGVIR VTI ++ V R+F GD LP+ Sbjct: 416 AMTKQEVDEGGYLKPGEVDAGTSIIAVRFKGGVVLGADSRTSTGTYVANRVSDKLTPLHDRLYCCRSGSAADTQALSDYVRYYLSSHSVELGRLPKVDTAANLFRSLCYHNKDRLLAGIIVAGWDPVKGGQVFSIPIGGAMVEQDFAIGGSGSTYIYGLVDAEYRPDMTKDECQQFVKKALAHAMARDGSSGGVIRTVTITENEVVRDFTSGDDLPF 632
BLAST of NO18G01720 vs. NCBI_GenBank
Match: XP_009520096.1 (hypothetical protein PHYSODRAFT_350003, partial [Phytophthora sojae] >EGZ24808.1 hypothetical protein PHYSODRAFT_350003, partial [Phytophthora sojae]) HSP 1 Score: 298.1 bits (762), Expect = 2.200e-77 Identity = 141/216 (65.28%), Postives = 172/216 (79.63%), Query Frame = 0 Query: 3 MPSQGLEQSMRLKPGEVATGTTIMAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQALSDYVRYFLASHSIDLGRAPAVSTAAKLMSTMIYRNKDNLMAGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKEQMTREECQAFVKKAISHAMARDGSSGGVIRMVTIDKSGVAREFIPGDKLPY 219 M Q +++ LKPGEV GT+I+AV F GGVVLGADSRTS GTY+ANRVSDKLT LH +YCCRSGSAADTQALSDYVRY+L+SHS++LGR P V TAA L ++ Y NKD L+AG+I+ GWDP GGQV+++ +GG + Q F+IGGSGSTYIYG VD ++ MT+EECQ FVKKA++HAMARDGSSGGVIR VTI ++ V R+F GD LP+ Sbjct: 420 MTKQEVDEGSYLKPGEVDAGTSIIAVRFKGGVVLGADSRTSMGTYIANRVSDKLTPLHDRLYCCRSGSAADTQALSDYVRYYLSSHSVELGRLPKVGTAANLFRSLCYHNKDRLLAGIIVAGWDPVKGGQVFSIPIGGAMVEQDFAIGGSGSTYIYGLVDSEYRPDMTKEECQQFVKKALAHAMARDGSSGGVIRTVTITENEVVRDFTCGDDLPF 635 The following BLAST results are available for this feature:
BLAST of NO18G01720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G01720 ID=NO18G01720|Name=NO18G01720|organism=Nannochloropsis oceanica|type=gene|length=4364bpback to top protein sequence of NO18G01720.1 >NO18G01720.1-protein ID=NO18G01720.1-protein|Name=NO18G01720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=221bpback to top Synonyms
Publications
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