NO18G01710, NO18G01710 (gene) Nannochloropsis oceanica

Overview
NameNO18G01710
Unique NameNO18G01710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1608
Alignment locationchr18:541091..542698 +

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Properties
Property NameValue
DescriptionSerine palmitoyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:541091..542698 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0016740transferase activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR015424PyrdxlP-dep_Trfase
IPR004839Aminotransferase_I/II
Homology
BLAST of NO18G01710 vs. NCBI_GenBank
Match: XP_005853342.1 (serine palmitoyltransferase [Nannochloropsis gaditana CCMP526] >EKU23020.1 serine palmitoyltransferase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 763.5 bits (1970), Expect = 4.500e-217
Identity = 383/536 (71.46%), Postives = 446/536 (83.21%), Query Frame = 0
Query:    1 MAGDTTLGDSFLDLTVVAHQVLRQFWRELTQDGFKEWVLAAPARYQKWWLNLVEHSPGHVVVETTLILFIIWLIFLRKTEDPAKDETFLTEQEIDLLVKEWKPEPLVPATDPSWDGEDEEALVIEEMQGTRVVVKEKILLNLASFDFLGLAGRPEVKDAARAALNKYGCGSCGPRGFYGSIDVHVGAEQAMAKFMGAEEAISYSDAASSVSSTLPAFAKKGDLLVVDDGVYEPIQTAINLSRAQVRWFRHNDMEDLKRVLEGVAREDARLGRNVLEQRRFVVVEGLYKNYGDLCPLPALVALKKEFCYRLYLDQTFSFGCFGKGGRGVAEHWGVDLGEIDIMSVSISHALGSVGGMCVGTHEVVDHQRLSGAGYCYSASAPPFTSSAAIAALELLEKEPGLVAKLQENASFLSRNLRKIPGLEVRSEEVSPILHVGLTQ--EGGWGGRKYEQEILREVSRGCVAGGYAVVTSKVTCLVEEREGGRGGERAGGGVALALPSLRLTVSAAHSQAELQGAVNVIRKVVGAALKKRKQSR 535
            MA D +LGDSF+DLT+   Q+ +Q  REL++DG KEW+L APARY+KWWLNLVEH+PGHVVVET LILFIIWLIFLRKT DP+K+++FL+E+EID LV+EW+PEPLVP  DP+WD ED +ALV+EE+ GTRVVV  K ++N+ASFDFLGLAGR EVK+AARAALNKYGCGSCGPRGFYGSIDVHV AEQAMA F+GAEEAISYSDAASSVSSTLPAFAKKGDLL+ D+GVYEPIQTAINLSRAQVR+FRHNDMEDL+RVL  VA ED RL RN  EQRRF+VVEGLYKN+GDLCPLPAL+ALK+++ YRLYLDQTFSFGCFG  GRG+AEH+GV L ++++MSVSISHALGSVGGMCVGT EVVDHQRLSGAGYCYSASAPPFTSSAA+AAL LLEKEP LV KL+ENA +L+R L KIPGL+VRS+E+SP+LHVG+ +    GW  R+ E+ +L+ ++R CV  GYAVVTSK T L          E    G  L  PSLRL VSA H++AEL+GAV  IR+     LKK    R
Sbjct:    1 MAADPSLGDSFIDLTIALEQLWQQVRRELSRDGVKEWLLGAPARYKKWWLNLVEHAPGHVVVETALILFIIWLIFLRKTVDPSKEDSFLSEKEIDQLVEEWQPEPLVPGPDPAWDEEDAQALVVEEVDGTRVVVNGKKMINMASFDFLGLAGRGEVKEAARAALNKYGCGSCGPRGFYGSIDVHVMAEQAMAAFLGAEEAISYSDAASSVSSTLPAFAKKGDLLIADEGVYEPIQTAINLSRAQVRYFRHNDMEDLERVLREVAEEDRRLDRNEREQRRFIVVEGLYKNFGDLCPLPALIALKRQYRYRLYLDQTFSFGCFGTAGRGLAEHFGVPLADVEVMSVSISHALGSVGGMCVGTSEVVDHQRLSGAGYCYSASAPPFTSSAAMAALALLEKEPELVTKLRENAVWLARALGKIPGLKVRSQEISPVLHVGVAKAVSDGW-TREEEERVLQAIARACVDAGYAVVTSKYTLL--------DVEAVSKGGLLPEPSLRLAVSAVHTRAELEGAVEAIRRSAAGVLKKHAGGR 527          
BLAST of NO18G01710 vs. NCBI_GenBank
Match: EWM23367.1 (serine long chain base subunit 1 [Nannochloropsis gaditana])

HSP 1 Score: 763.1 bits (1969), Expect = 5.900e-217
Identity = 383/536 (71.46%), Postives = 446/536 (83.21%), Query Frame = 0
Query:    1 MAGDTTLGDSFLDLTVVAHQVLRQFWRELTQDGFKEWVLAAPARYQKWWLNLVEHSPGHVVVETTLILFIIWLIFLRKTEDPAKDETFLTEQEIDLLVKEWKPEPLVPATDPSWDGEDEEALVIEEMQGTRVVVKEKILLNLASFDFLGLAGRPEVKDAARAALNKYGCGSCGPRGFYGSIDVHVGAEQAMAKFMGAEEAISYSDAASSVSSTLPAFAKKGDLLVVDDGVYEPIQTAINLSRAQVRWFRHNDMEDLKRVLEGVAREDARLGRNVLEQRRFVVVEGLYKNYGDLCPLPALVALKKEFCYRLYLDQTFSFGCFGKGGRGVAEHWGVDLGEIDIMSVSISHALGSVGGMCVGTHEVVDHQRLSGAGYCYSASAPPFTSSAAIAALELLEKEPGLVAKLQENASFLSRNLRKIPGLEVRSEEVSPILHVGLTQ--EGGWGGRKYEQEILREVSRGCVAGGYAVVTSKVTCLVEEREGGRGGERAGGGVALALPSLRLTVSAAHSQAELQGAVNVIRKVVGAALKKRKQSR 535
            MA D +LGDSF+DLT+   Q+ +Q  REL++DG KEW+L APARY+KWWL+LVEH+PGHVVVET LILFIIWLIFLRKT DP+K+++FL+E+EID LV+EW+PEPLVP  DP+WD ED +ALV+EE+ GTRVVV  K ++N+ASFDFLGLAGR EVK+AARAALNKYGCGSCGPRGFYGSIDVHV AEQAMA F+GAEEAISYSDAASSVSSTLPAFAKKGDLL+ D+GVYEPIQTAINLSRAQVR+FRHNDMEDL+RVL  VA ED RL RN  EQRRF+VVEGLYKN+GDLCPLPAL+ALK+++ YRLYLDQTFSFGCFG  GRG+AEH+GV L ++++MSVSISHALGSVGGMCVGT EVVDHQRLSGAGYCYSASAPPFTSSAA+AAL LLEKEP LV KL+ENA +L+R L KIPGLEVRS+E+SP+LHVG+ +    GW  R+ E+ +L+ ++R CV  GYAVVTSK T L          E    G  L  PSLRL VSA H++AEL+GAV  IR+     LKK    R
Sbjct:    1 MAADPSLGDSFIDLTIALEQLWQQVRRELSRDGVKEWLLGAPARYKKWWLHLVEHAPGHVVVETALILFIIWLIFLRKTVDPSKEDSFLSEKEIDQLVEEWQPEPLVPGPDPAWDEEDAQALVVEEVDGTRVVVNGKKMINMASFDFLGLAGRGEVKEAARAALNKYGCGSCGPRGFYGSIDVHVMAEQAMAAFLGAEEAISYSDAASSVSSTLPAFAKKGDLLIADEGVYEPIQTAINLSRAQVRYFRHNDMEDLERVLREVAEEDRRLDRNEREQRRFIVVEGLYKNFGDLCPLPALIALKRQYRYRLYLDQTFSFGCFGTAGRGLAEHFGVPLADVEVMSVSISHALGSVGGMCVGTSEVVDHQRLSGAGYCYSASAPPFTSSAAMAALALLEKEPELVTKLRENAVWLARALGKIPGLEVRSQEISPVLHVGVAKAVSDGW-TREEEERVLQAIARACVDAGYAVVTSKYTLL--------DVEAVSKGGLLPEPSLRLAVSAVHTRAELEGAVEAIRRSAAGVLKKHAGGR 527          
BLAST of NO18G01710 vs. NCBI_GenBank
Match: XP_008866300.1 (hypothetical protein H310_03982 [Aphanomyces invadans] >ETW04862.1 hypothetical protein H310_03982 [Aphanomyces invadans])

HSP 1 Score: 386.3 bits (991), Expect = 1.500e-103
Identity = 199/490 (40.61%), Postives = 306/490 (62.45%), Query Frame = 0
Query:   42 PARYQKWWLNLVEHSPGHVVVETTLILFIIWLIFLRKTEDPAKDET--FLTEQEIDLLVKEWKPEPLVPATDPSWDGEDEEALVIEEMQGTRVVVK--EKILLNLASFDFLGLAGRPEVKDAARAALNKYGCGSCGPRGFYGSIDVHVGAEQAMAKFMGAEEAISYSDAASSVSSTLPAFAKKGDLLVVDDGVYEPIQTAINLSRAQVRWFRHNDMEDLKRVLEGVAREDARLGRNVLEQRRFVVVEGLYKNYGDLCPLPALVALKKEFCYRLYLDQTFSFGCFGKGGRGVAEHWGVDLGEIDIMSVSISHALGSVGGMCVGTHEVVDHQRLSGAGYCYSASAPPFTSSAAIAALELLEKEPGLVAKLQENASFLSRNLRKIPGLEVRSEEVSPILHVGLTQEGGWGGRKYEQEILREVSRGCVAGGYAVVTSKVTCLVEEREGGRGGERAGGGVALALPSLRLTVSAAHSQAELQGAVNVIRKVVGAAL 528
            P  Y  +   + + SP HV++ET LI+FI+++ F++K+    K ET   LTE EI  L  EW+PEPLVPA+    D       V+E    + + ++  +  LLN+A+ DFLG+A RPE+K  AR+AL KYGCGSCGPRGFYG+ID H   E+ +A F+G  ++I++SD  ++ SS LPA+AK+GDL+VVD+GV + I   +NL+R +  +++HNDMEDL+RVL+ V   D + GR    QRR++V EGL++N G L PLP +V L ++ C+RL+LD+T+SFG  G  G+G+ EH+ + + ++DI+  ++S  L  VGG   G+  VVD+QR++ AGY +SASAPP+TS+ A  ++ +L+ EPGL+  L+E A    R L  IPGL V S+ +SP++HV +  E G   +++  ++ R V       G AVV+  +              +    +   L ++R T++A H+   ++ A  ++     AA+
Sbjct:   37 PWTYYNYIKTIYDRSPEHVIIETFLIVFILYISFVKKSSSRPKGETGEKLTESEIQTLCDEWEPEPLVPASFKPADDRPAYIGVVETTPSSHIKIQGIKDPLLNMATVDFLGMAARPEIKSVARSALTKYGCGSCGPRGFYGTIDTHEILEKDLASFIGTTDSITFSDLEATCSSVLPAYAKRGDLIVVDEGVTDSILIGVNLARCKTLFYKHNDMEDLERVLDSVRAADKKAGRASDAQRRYIVTEGLFRNSGALLPLPKVVELSRKHCFRLFLDETYSFGVLGATGKGITEHFNMSVDDVDILCGALSTTLAGVGGFSTGSQLVVDYQRINSAGYVFSASAPPYTSAVASESIRILKSEPGLLKSLRERAVQAHRLLSAIPGLHVLSDPISPVVHVRVATENGTTNKEWTAQVCRRVVEEAKTRGLAVVSPHL--------------KPNSLMDTPLATVRFTLNANHTTKHVETACKLLVDAFQAAV 512          
BLAST of NO18G01710 vs. NCBI_GenBank
Match: GBG28453.1 (Serine palmitoyltransferase 1 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 379.0 bits (972), Expect = 2.400e-101
Identity = 219/502 (43.63%), Postives = 303/502 (60.36%), Query Frame = 0
Query:   45 YQKWWLNLVEHSPGHVVVETTLILFIIWLIFLRKTEDPAKDETFLTEQEIDLLVKEWKPEPLVPATDPSWDG-----EDEEALVIEEMQGTRVVVKEKILLNLASFDFLGLAGRPEVKDAARAALNKYGCGSCGPRGFYGSIDVHVGAEQAMAKFMGAEEAISYSDAASSVSSTLPAFAKKGDLLVVDDGVYEPIQTAINLSRAQVRWFRHNDMEDLKRVLEGVAREDARLGRNVLEQRRFVVVEGLYKNYGDLCPLPALVALKKEFCYRLYLDQTFSFGCFGKGGRGVAEHWGVDLGEIDIMSVSISHALGSVGGMCVGTHEVVDHQRLSGAGYCYSASAPPFTSSAAIAALELL--EKEPGLVAKLQENASFLSRNLRKIP--GLEVRSEEVSPILHVGLT---------QEGGWGGRKYEQEILREVSRGCVAGGYAVVTSKVTCLVEEREGGRGGERAGGGVALALPSLRLTVSAAHSQAELQGAVNVIRKVVGAALK 529
            Y KWW+NL   +P H++VETTLIL I++++  R ++  +K ET L       L+ E++PEPL P   P  +G     ED   L  +  + T+V   +K +LNL + DFLG   R E+  AA  ALNKYGCGSCGPRGFYGSIDVHV  E+ +A F G ++ I YSDA S+ +S +PAF+ + DLLVVD+ V + I T +NLSR++V +F+HNDMEDL RVL+ V  ED RL R    QRRF+VVEGLY+NYGD+CPL  +V LK ++ +RL+LD++ S G FG  G+GVAEH+G+++ EID+   S+S    SVGG CVG+ EVV+HQRLSGAGYC+SAS+PPF S+ A  A++LL  E    L   +++NA      +RK+    L   S   S + HV L           +     R  E++ LR +++     G     +    L +  +   G  +      L  PS+R  ++A H + EL  AV  + K    ALK
Sbjct:   37 YLKWWINLWRENPVHLLVETTLILLILYILLQRPSKKRSKMET-LPAAVAQELLNEYEPEPLCP---PLTEGARMVLEDSVLLETKPSKYTKVSGVDKEVLNLTTMDFLGFGQRKEIHKAAEDALNKYGCGSCGPRGFYGSIDVHVFLEKDLANFFGTDDCIVYSDADSTATSAIPAFSNRSDLLVVDEAVNDAIITGVNLSRSRVLFFKHNDMEDLARVLQKVEEEDRRLKRK--PQRRFIVVEGLYRNYGDVCPLDEVVGLKNKYRWRLFLDESHSIGVFGASGKGVAEHFGIEMSEIDLFVSSLSTTFASVGGFCVGSREVVEHQRLSGAGYCFSASSPPFVSTVASQAIKLLTSEARSKLAPAVKKNAQTFHAAVRKLADGDLVTVSNPSSALAHVRLAPKYQLAEDPADYDEATRCAEEKTLRAITKKMREEGVLATVANYIILPDTVKQVVGSNKR---PPLPPPSIRFAITALHDEDELTRAVQTLVKCTREALK 529          
BLAST of NO18G01710 vs. NCBI_GenBank
Match: OQR83788.1 (serine palmitoyltransferase [Achlya hypogyna])

HSP 1 Score: 375.9 bits (964), Expect = 2.000e-100
Identity = 205/485 (42.27%), Postives = 297/485 (61.24%), Query Frame = 0
Query:   38 VLAAPARYQKWWLNLVEHSPGHVVVETTLILFIIWLIFLRKTEDPAKDETFLTEQEIDLLVKEWKPEPLV-PATDPSWDGEDEEALVIEEMQGTRVVVK--EKILLNLASFDFLGLAGRPEVKDAARAALNKYGCGSCGPRGFYGSIDVHVGAEQAMAKFMGAEEAISYSDAASSVSSTLPAFAKKGDLLVVDDGVYEPIQTAINLSRAQVRWFRHNDMEDLKRVLEGVAREDARLGRNVLEQRRFVVVEGLYKNYGDLCPLPALVALKKEFCYRLYLDQTFSFGCFGKGGRGVAEHWGVDLGEIDIMSVSISHALGSVGGMCVGTHEVVDHQRLSGAGYCYSASAPPFTSSAAIAALELLEKEPGLVAKLQENASFLSRNLRKIPGLEVRSEEVSPILHVGLTQEGGWGGRKYEQEILREVSRGCVAGGYAVVTSKVTCLVEEREGGRGGERAGGGVALALPSLRLTVSAAHSQAELQGAVNVI 520
            V+ AP+ Y  +   + E SP HV++ET LI+FI ++   +KT+ P   +  LT  EI+ LV EW PEP+V P ++    G      ++E+  GT + ++     +LNL + DFLG A RPE+K  AR AL KYGCGSCGPRGFYG+ID H   E+ +AKF+G  ++I++SD  ++ SS LPAFAK+GDL+VVDDGV + I T +NL+R    +F+HNDM DL+RVL+ V   D + GR    QRR++V EGL++NYGD+ PLP +V L +++ +RL++D++FSFG  G  G+GV EH+ + +  IDI+  S+  +L  VGG   G+  VVD+QR++ AGY +SASAPP+TS+    A+ LL+ EP L++ L+ NA+     L   P L+V S   SP++HV L            + I   V R C++ G AVV               G  +A    A A  ++RLTV+A H+   +  AV  +
Sbjct:   31 VVHAPSTYVAYIKAVYERSPEHVIIETFLIVFIFYITLFKKTKVP---KVRLTAAEIESLVDEWHPEPIVPPVSETELKGASYNLGIVEDTPGTHMKLRGIAAPVLNLGTMDFLGFANRPEIKKTARDALTKYGCGSCGPRGFYGTIDTHELLEKDIAKFIGTTDSITFSDIEATASSVLPAFAKRGDLIVVDDGVNDSILTGVNLARCTTLYFKHNDMGDLERVLKSVRDADLKAGRRSDCQRRYLVTEGLFRNYGDIVPLPQVVELTRKYFFRLFVDESFSFGVLGATGKGVTEHFNLPIESIDILCGSLCTSLAGVGGFSTGSQHVVDYQRINSAGYVFSASAPPYTSAVCSEAIRLLKNEPALLSSLKANANAAHAGLSASPLLKVLSHADSPVVHVCLANGA------TNKHIATAVVRECLSKGVAVVA--------------GHHKASPLAADAFSTVRLTVNAKHTLEHIATAVKTV 492          
BLAST of NO18G01710 vs. NCBI_GenBank
Match: XP_012198955.1 (hypothetical protein SPRG_05056 [Saprolegnia parasitica CBS 223.65] >KDO30345.1 hypothetical protein SPRG_05056 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 374.8 bits (961), Expect = 4.500e-100
Identity = 205/493 (41.58%), Postives = 302/493 (61.26%), Query Frame = 0
Query:   41 APARYQKWWLNLVEHSPGHVVVETTLILFIIWLIFLRKTEDPAKDETFLTEQEIDLLVKEWKPEPLV-PATDPSWDGEDEEALVIEEMQGTRVVVK--EKILLNLASFDFLGLAGRPEVKDAARAALNKYGCGSCGPRGFYGSIDVHVGAEQAMAKFMGAEEAISYSDAASSVSSTLPAFAKKGDLLVVDDGVYEPIQTAINLSRAQVRWFRHNDMEDLKRVLEGVAREDARLGRNVLEQRRFVVVEGLYKNYGDLCPLPALVALKKEFCYRLYLDQTFSFGCFGKGGRGVAEHWGVDLGEIDIMSVSISHALGSVGGMCVGTHEVVDHQRLSGAGYCYSASAPPFTSSAAIAALELLEKEPGLVAKLQENASFLSRNLRKIPGLEVRSEEVSPILHV-----GLTQEGGWGGRKYEQEILREVSRGCVAGGYAVVTSKVTCLVEEREGGRGGERAGGGVALALPSLRLTVSAAHSQAELQGAVNVIRKVVGA 526
            AP+ Y ++   + E SP HV++ET LI+FI++++F++K++ P +    LT  EI  LV EW+PEP+V P ++ +         ++E+   T + ++     +LNL + DFLG+A R E+K  AR AL KYGCGSCGPRGFYG+ID H   E+ +A F+G  ++I++SD  ++ SS LPAFAK+GDL+VVDDGV + I+T +NL+R    +F+HNDM DL+RVL+ V   D + GR    QRR++V EGL++NYGD+ PLP +VAL + + +RL++D++FSFG  G  G+GV EH+ + +  IDI+  S+  +L  VGG   G+  VVD+QR++ AGY +SASAPP+TS+    A+ LL+ EP LVA+L+ NA      LR    L + S+  SP+LHV      LT+E   G           + + C+A G AVV               G  +       A  ++RLTV+A HS   +  A  V+  V+ A
Sbjct:   37 APSTYLQYIKAVYERSPEHVIIETFLIVFILYILFVKKSKLPKQAADRLTPAEIQSLVDEWQPEPIVAPISEAAIAAASYNLGIVEDTPNTHMKLRGIASPVLNLGTMDFLGMASRDEIKTTARNALTKYGCGSCGPRGFYGTIDTHEILEKDIAHFIGTTDSITFSDIEATASSVLPAFAKRGDLIVVDDGVNDSIRTGVNLARCTTLYFKHNDMADLERVLKSVRDADKKAGRRSDCQRRYIVTEGLFRNYGDILPLPKVVALARAYFFRLFVDESFSFGVLGATGKGVTEHFNLPIDSIDIICGSLCTSLAGVGGFSTGSQHVVDYQRINSAGYVFSASAPPYTSAVCSEAIRLLKNEPSLVAQLKTNAQAAHAALRASSALTLLSDPESPVLHVTTANAPLTKEDAAG-----------IVKACLAKGVAVVA--------------GDHKPTPLKTAAFATIRLTVNAQHSAEHIATACRVVADVMTA 504          
BLAST of NO18G01710 vs. NCBI_GenBank
Match: XP_008606126.1 (hypothetical protein SDRG_02323 [Saprolegnia diclina VS20] >EQC40427.1 hypothetical protein SDRG_02323 [Saprolegnia diclina VS20])

HSP 1 Score: 371.7 bits (953), Expect = 3.800e-99
Identity = 201/488 (41.19%), Postives = 296/488 (60.66%), Query Frame = 0
Query:   41 APARYQKWWLNLVEHSPGHVVVETTLILFIIWLIFLRKTEDPAKDETFLTEQEIDLLVKEWKPEPLV-PATDPSWDGEDEEALVIEEMQGTRVVVK--EKILLNLASFDFLGLAGRPEVKDAARAALNKYGCGSCGPRGFYGSIDVHVGAEQAMAKFMGAEEAISYSDAASSVSSTLPAFAKKGDLLVVDDGVYEPIQTAINLSRAQVRWFRHNDMEDLKRVLEGVAREDARLGRNVLEQRRFVVVEGLYKNYGDLCPLPALVALKKEFCYRLYLDQTFSFGCFGKGGRGVAEHWGVDLGEIDIMSVSISHALGSVGGMCVGTHEVVDHQRLSGAGYCYSASAPPFTSSAAIAALELLEKEPGLVAKLQENASFLSRNLRKIPGLEVRSEEVSPILHVGLTQEGGWGGRKYEQEILREVSRGCVAGGYAVVTSKVTCLVEEREGGRGGERAGGGVALALPSLRLTVSAAHSQAELQGAVNVIRKVVGA 526
            AP+ Y ++   + E SP HV++ET LI+FI+++ F++K++ P +    LT  EI  LV EW+PEP+V P +D +         ++E+  GT + ++     +LNL + DFLG+A R E+K  AR AL KYGCGSCGPRGFYG+ID H   E+ +A F+G  ++I++SD  ++ SS LPAFAK+GDL++VDDGV + I+T +NL+R    +++HNDM DL+RVL+ V   D + GR    QRR++V EGL++NYGD+ PLP +VAL + + +RL++D++FSFG  G  G+GV EH+ + +  IDI+  S+  +L  VGG   G+  VVD+QR++ AGY +SASAPP+TS+    A+ LL+ EP LVA+L+ NA      LR    L V S+  SP+LH               Q     + + C+A G AVV               G  +       A  ++RLTV+A HS   +  A  V+   + A
Sbjct:   37 APSTYLQYIKAVYERSPEHVIIETFLIVFILYISFVKKSKLPKQAADRLTPAEIQSLVDEWQPEPIVAPISDATIAAATYNLGIVEDTPGTHMKLRGIASPVLNLGTMDFLGMANRDEIKTTARNALTKYGCGSCGPRGFYGTIDTHEILEKDIAHFIGTTDSITFSDIEATASSVLPAFAKRGDLIIVDDGVNDSIRTGVNLARCTTLYYKHNDMADLERVLKSVRDADKKAGRRSDCQRRYIVTEGLFRNYGDILPLPQVVALARAYYFRLFVDESFSFGVLGATGKGVTEHFNLPIDSIDIICGSLCTSLAGVGGFSTGSQHVVDYQRINSAGYVFSASAPPYTSAVCSEAIRLLKNEPSLVAQLKANAQAAHAALRASSLLTVLSDPESPVLHATT------ANAPLTQAQAAAIVQACLAKGVAVVA--------------GDHKPTPLKTAAFSTIRLTVNAQHSAEHIATACRVVVDAIAA 504          
BLAST of NO18G01710 vs. NCBI_GenBank
Match: GAX13909.1 (serine palmitoyltransferase [Fistulifera solaris])

HSP 1 Score: 371.7 bits (953), Expect = 3.800e-99
Identity = 226/562 (40.21%), Postives = 329/562 (58.54%), Query Frame = 0
Query:   27 RELTQDGFKEWVLAAPARYQKWWLNLVEHSPGHVVVETTLILFIIWLIFLRKTEDPAKDE-TFLTEQEIDLLVKEWKPE---PLVP------------------------------ATDPSWDG-------EDEEAL---VIEEMQGTRVVVKEKILLNLASFDFLG-LAGRPEVKDAARAALNKYGCGSCGPRGFYGSIDVHVGAEQAMAKFMGAEEAISYSDAASSVSSTLPAFAKKGDLLVVDDGVYEPIQTAINLSRAQVRWFRHNDMEDLKRVLEGVAREDARLGRNVLEQRRFVVVEGLYKNYGDLCPLPALVALKKEFCYRLYLDQTFSFGCFGKGGRGVAEHWGVDL-GEIDIMSVSISHALGSVGGMCVGTHEVVDHQRLSGAGYCYSASAPPFTSSAAIAALELLEKEPGLVAKLQENASFLSRNLRKI------PGLEVRSEEVSPILHVGLTQEGGWGGRKYEQEI--LREVSRGCVAGGYAVVTSKVTCLVEEREGGRGGERAGGGVALA-LPSLRLTVSAAHSQAELQGAVNVIRKVVGAALKKRKQS 534
            R LT     + + + P  Y++WWLNLV + P HV+VETTLI+ I++ +  R  +  A DE   LT +E + L+ +WK     PL P                              A+  S D          E+A         + T    + K +LN  + D+LG  A    +K+AA  AL+KYGCGSCGPRGFYG++DVH+  E AMAKF+G ++AI YSD AS+VSST+ AFAK+GDL+V D+G+YEP+ T ++LSRA V+WF+HNDM DL++VL  V   D +LGR + +QRRF+VVEGLYKN G + PL  L+ LK+++C+RL LD++ SFG  GK GRGV E +G  L  +++I ++S+ +A+GS+GG+ VG+ EVVDHQRLSG+GYC+SAS+PPFT++AAI ++ELL ++P  + +L+EN  +L   L  +        L + S+E SP++   + Q       K   EI  L EV +  +  G A V +              G ++ G V  A  P++R+ VS  H++ ++  AV  + + V   L +   S
Sbjct:   29 RRLTLSEVADVLTSFPVLYKEWWLNLVANDPIHVLVETTLIIAIVYFLVSRSKDWKASDEKEKLTAKEENELLYDWKQNIRAPLAPKVQHQPEYAVIHKTDGRTITLQVNVSSSMSASSVSTDSTPVTNNVSTEDAFKGGATRASENTHPAPEFKTVLNFGTSDYLGRSASNSLIKEAALKALDKYGCGSCGPRGFYGTVDVHLELESAMAKFIGTDDAILYSDGASTVSSTVAAFAKRGDLIVADEGIYEPLMTGVSLSRANVKWFKHNDMADLQKVLAQVQESDIKLGRKLNDQRRFLVVEGLYKNTGKVVPLDDLIKLKEKYCFRLILDESNSFGVLGKTGRGVTELFGKQLMRDVEITTISLENAVGSIGGVTVGSEEVVDHQRLSGSGYCFSASSPPFTATAAIKSIELLAEQPETLKQLRENQLYLRSKLLNLCQHKLEEVLVITSDERSPMV---ILQVADIPETKNLDEIAFLSEVVKESLNRGVAFVAT--------------GHQSVGLVRTAPPPAIRICVSCLHTKEDIDHAVTALGESVDFVLNRMHDS 573          
BLAST of NO18G01710 vs. NCBI_GenBank
Match: GAX16818.1 (serine palmitoyltransferase [Fistulifera solaris])

HSP 1 Score: 369.8 bits (948), Expect = 1.500e-98
Identity = 223/567 (39.33%), Postives = 327/567 (57.67%), Query Frame = 0
Query:   27 RELTQDGFKEWVLAAPARYQKWWLNLVEHSPGHVVVETTLILFIIWLIFLRKTEDPAKDE-TFLTEQEIDLLVKEWKPE---PLVPATDPSWDGEDEEALVIEEMQGTRVVVKE---------------------------------------------KILLNLASFDFLG-LAGRPEVKDAARAALNKYGCGSCGPRGFYGSIDVHVGAEQAMAKFMGAEEAISYSDAASSVSSTLPAFAKKGDLLVVDDGVYEPIQTAINLSRAQVRWFRHNDMEDLKRVLEGVAREDARLGRNVLEQRRFVVVEGLYKNYGDLCPLPALVALKKEFCYRLYLDQTFSFGCFGKGGRGVAEHWGVDL-GEIDIMSVSISHALGSVGGMCVGTHEVVDHQRLSGAGYCYSASAPPFTSSAAIAALELLEKEPGLVAKLQENASFLSRNLRKI------PGLEVRSEEVSPILHVGLTQEGGWGGRKYEQEI--LREVSRGCVAGGYAVVTSKVTCLVEEREGGRGGERAGGGVALA-LPSLRLTVSAAHSQAELQGAVNVIRKVVGAALKKRKQS 534
            R +T     + + + P  Y++WWLNLV + P HV+VETTLI+ I++ +  R  +  A DE   LT +E + L+ +WK     PL P           E  VI +  G  + ++                                              K +LN  + D+LG  A    +K+AA  AL+KYGCGSCGPRGFYG++DVH+  E AMAKF+G ++AI YSD AS+VSST+ AFAK+GDL+V D+G+YEP+ T ++LSRA V+WF+HNDM DL++VL  V   D +LGR + +QRRF+VVEGLYKN G + PL  L+ LK+++C+RL LD++ SFG  GK GRGV E +G  L  +++I ++S+ +A+GS+GG+ VG+ EVVDHQRLSG+GYC+SAS+PPFT++AAI ++ELL ++P  + +L+EN  +L   L  +        L + S+E SP++   + Q       K   EI  L EV +  +  G A V +              G ++ G V  A  P++R+ VS  H++ ++  AV  + + V   L +   S
Sbjct:   29 RRVTLSEVADALTSFPVLYKEWWLNLVANDPIHVLVETTLIIAIVYFLVSRSKDWKASDEKEKLTAKEENELLYDWKQNIRAPLAPKVQ-----HQPECAVIHKTDGRTITLQVNVSSAMSASSVSTDSTPVTNNVSTEDAFKGGAARAGESIHPAPEFKTVLNFGTSDYLGRSASNSLIKEAAIKALDKYGCGSCGPRGFYGTVDVHLELESAMAKFIGTDDAILYSDGASTVSSTVAAFAKRGDLIVADEGIYEPLMTGVSLSRANVKWFKHNDMADLQKVLAQVQESDRKLGRKLNDQRRFLVVEGLYKNTGKIVPLDDLIKLKEKYCFRLILDESNSFGVLGKTGRGVTELFGKQLMRDVEITTISLENAVGSIGGVTVGSEEVVDHQRLSGSGYCFSASSPPFTATAAIKSIELLAEQPETLKQLRENQLYLRSKLLNLCQHKLEEVLVITSDERSPMV---ILQVADIPETKNLDEIAFLSEVVKESLNRGVAFVAT--------------GHQSVGLVRTAPPPAIRICVSCLHTKEDIDHAVTALGESVDFVLNRMHDS 573          
BLAST of NO18G01710 vs. NCBI_GenBank
Match: XP_008905166.1 (hypothetical protein PPTG_11756 [Phytophthora parasitica INRA-310] >ETN09333.1 hypothetical protein PPTG_11756 [Phytophthora parasitica INRA-310])

HSP 1 Score: 368.6 bits (945), Expect = 3.200e-98
Identity = 204/499 (40.88%), Postives = 306/499 (61.32%), Query Frame = 0
Query:   41 APARYQKWWLNLVEHSPGHVVVETTLILFIIWLIFLRKTEDPAKDETFLTEQEIDLLVKEWKPEPLVPATDPSWDGEDEEALVIEEMQGTRVVVK--EKILLNLASFDFLGLAGRPEVKDAARAALNKYGCGSCGPRGFYGSIDVHVGAEQAMAKFMGAEEAISYSDAASSVSSTLPAFAKKGDLLVVDDGVYEPIQTAINLSRAQVRWFRHNDMEDLKRVLEGVAREDARLGRNVLEQRRFVVVEGLYKNYGDLCPLPALVALKKEFCYRLYLDQTFSFGCFGKGGRGVAEHWGVDLGEIDIMSVSISHALGSVGGMCVGTHEVVDHQRLSGAGYCYSASAPPFTSSAAIAALELLEKEPGLVAKLQENASFLSRNLRK-IPGLEVRSEE-VSPILHVGLTQE------GGWGGRKYEQEILREVSRGCVAGGYAVVTSKVTCLVEEREGGRGGERAGGGVALALPSLRLTVSAAHSQAELQGAVNVIRKVVGAALKK 530
            AP+ Y ++  ++ E SP HV++ET LI+F+I++ F+ K + P      L+E+EID L +EW PEP++P        + +   ++E    T + ++   K LLNLA+FDFLGL  RPE+K+ A   L KYGCGSCGPRGFYG+ID H   E+ +A+ MG  ++I++SD  ++ SS LPAFAK+GDL+V+DDG  + I    NL+R  V +++HND+EDL+RVL+ V  ED R  R    QRR+VV E L++N+GD+  LP +V L  ++ +RL+LD++FSFG  GK GRG+ EH+G+D+ E+ I+  S++ +  SVGG   G+ EVVD+QR++ AGY +SASAPPFTS+    A+ +++ EP L  KL++NA     +L   + G+   S+  VSPILH+ L  E           R  ++++   V + C+A G A+ + +                        LPSLR++V+A HS  EL+ A  +I     A  K+
Sbjct:   31 APSSYYEYIRSIYERSPEHVIIETFLIVFVIYITFV-KRDKPKGAAAKLSEREIDDLCEEWTPEPIIPPNAVVDVNKSKPIGIVEATPDTHIKLQGYGKPLLNLATFDFLGLGSRPELKEVAVKTLTKYGCGSCGPRGFYGTIDTHEILEKDIAQMMGTTDSITFSDTEATSSSVLPAFAKRGDLIVMDDGCNDSILVGANLARCTVLYYKHNDLEDLERVLKSVRDEDKRKKRGSDCQRRYVVTEALFRNHGDMIDLPHIVELCNKYFFRLFLDESFSFGVLGKSGRGLTEHYGMDVSEVAIICSSLAGSTASVGGFSTGSQEVVDYQRINSAGYVFSASAPPFTSACCSEAIRIMKNEPELFTKLRDNAKLAHDSLSAGVQGVYSLSKAVVSPILHLRLLPEVVARVGSEENQRALQRKVCDTVMQKCLAKGVAICSPRYKT---------------HQTLEPLPSLRVSVTAIHSPKELEAACKIIATEAMATAKE 513          
The following BLAST results are available for this feature:
BLAST of NO18G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853342.14.500e-21771.46serine palmitoyltransferase [Nannochloropsis gadit... [more]
EWM23367.15.900e-21771.46serine long chain base subunit 1 [Nannochloropsis ... [more]
XP_008866300.11.500e-10340.61hypothetical protein H310_03982 [Aphanomyces invad... [more]
GBG28453.12.400e-10143.63Serine palmitoyltransferase 1 [Aurantiochytrium sp... [more]
OQR83788.12.000e-10042.27serine palmitoyltransferase [Achlya hypogyna][more]
XP_012198955.14.500e-10041.58hypothetical protein SPRG_05056 [Saprolegnia paras... [more]
XP_008606126.13.800e-9941.19hypothetical protein SDRG_02323 [Saprolegnia dicli... [more]
GAX13909.13.800e-9940.21serine palmitoyltransferase [Fistulifera solaris][more]
GAX16818.11.500e-9839.33serine palmitoyltransferase [Fistulifera solaris][more]
XP_008905166.13.200e-9840.88hypothetical protein PPTG_11756 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR046ncniR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004021NSK004021Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G01710.1NO18G01710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G01710.1NO18G01710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G01710 ID=NO18G01710|Name=NO18G01710|organism=Nannochloropsis oceanica|type=gene|length=1608bp
ATGGCTGGGGACACGACGCTGGGGGACTCCTTCCTGGATCTTACTGTGGT
TGCCCACCAGGTGCTGCGCCAATTTTGGAGGGAACTTACCCAAGACGGCT
TTAAGGAATGGGTCTTAGCCGCCCCCGCCCGCTACCAAAAATGGTGGCTC
AATCTCGTGGAGCATTCGCCGGGGCACGTTGTCGTGGAGACAACACTGAT
ACTGTTTATTATATGGTTGATATTTCTCCGCAAGACGGAAGATCCGGCCA
AGGATGAAACTTTTTTGACGGAGCAGGAAATCGACCTGCTCGTCAAGGAA
TGGAAGCCCGAGCCGCTTGTCCCTGCAACTGACCCTTCATGGGACGGCGA
AGACGAAGAAGCACTGGTCATCGAAGAAATGCAAGGTACCCGCGTCGTGG
TTAAAGAGAAAATCCTTCTTAATCTTGCTTCCTTTGATTTCCTCGGCCTA
GCCGGTCGTCCCGAGGTGAAGGATGCAGCACGCGCGGCGCTGAATAAGTA
CGGGTGTGGTTCATGTGGACCCCGCGGGTTTTATGGCTCCATTGATGTGC
ATGTAGGAGCGGAGCAAGCTATGGCAAAGTTTATGGGTGCAGAGGAAGCC
ATTTCGTACTCGGATGCGGCGAGCAGTGTGAGCTCGACCTTGCCGGCGTT
TGCGAAGAAAGGAGATTTGCTGGTGGTAGATGATGGGGTGTACGAGCCGA
TCCAGACGGCGATTAACTTGAGTAGGGCGCAAGTGAGATGGTTTCGGCAC
AATGACATGGAGGATTTGAAACGGGTGTTGGAGGGAGTGGCGCGGGAGGA
TGCGAGGTTGGGGAGAAACGTGCTGGAGCAACGGCGGTTTGTGGTGGTGG
AGGGGTTGTACAAGAACTACGGAGACCTGTGCCCGCTGCCCGCGTTGGTG
GCGTTGAAGAAGGAGTTTTGTTACCGACTATATTTGGATCAGACATTCTC
GTTTGGTTGTTTCGGGAAAGGGGGGAGGGGGGTTGCAGAGCACTGGGGGG
TGGACTTGGGAGAGATCGATATTATGAGTGTTTCAATTTCGCATGCCCTG
GGCTCAGTGGGTGGCATGTGTGTGGGGACGCATGAGGTGGTGGATCACCA
AAGATTATCTGGAGCAGGGTATTGTTACTCGGCTTCTGCTCCTCCGTTCA
CTTCGTCCGCCGCAATCGCGGCATTAGAGCTGCTGGAGAAGGAACCGGGG
TTGGTGGCCAAGTTACAAGAAAATGCGAGTTTTTTAAGTCGGAACTTGAG
AAAGATTCCGGGATTGGAGGTGAGGAGTGAGGAGGTTTCACCGATTTTAC
ATGTGGGCTTGACGCAGGAGGGAGGCTGGGGAGGGAGGAAGTATGAGCAG
GAGATATTGAGGGAGGTATCGCGGGGTTGCGTGGCAGGGGGGTATGCGGT
TGTCACTAGCAAGGTGACTTGTTTGGTGGAAGAGAGGGAAGGAGGGAGGG
GAGGGGAAAGAGCAGGAGGAGGAGTAGCTTTGGCGCTGCCATCGTTGAGG
TTGACGGTGTCGGCGGCGCATAGTCAGGCGGAGTTACAAGGGGCGGTGAA
CGTCATCAGAAAGGTGGTTGGCGCGGCGTTGAAGAAGAGGAAGCAGTCGA
GGGGCTGA
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protein sequence of NO18G01710.1

>NO18G01710.1-protein ID=NO18G01710.1-protein|Name=NO18G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=536bp
MAGDTTLGDSFLDLTVVAHQVLRQFWRELTQDGFKEWVLAAPARYQKWWL
NLVEHSPGHVVVETTLILFIIWLIFLRKTEDPAKDETFLTEQEIDLLVKE
WKPEPLVPATDPSWDGEDEEALVIEEMQGTRVVVKEKILLNLASFDFLGL
AGRPEVKDAARAALNKYGCGSCGPRGFYGSIDVHVGAEQAMAKFMGAEEA
ISYSDAASSVSSTLPAFAKKGDLLVVDDGVYEPIQTAINLSRAQVRWFRH
NDMEDLKRVLEGVAREDARLGRNVLEQRRFVVVEGLYKNYGDLCPLPALV
ALKKEFCYRLYLDQTFSFGCFGKGGRGVAEHWGVDLGEIDIMSVSISHAL
GSVGGMCVGTHEVVDHQRLSGAGYCYSASAPPFTSSAAIAALELLEKEPG
LVAKLQENASFLSRNLRKIPGLEVRSEEVSPILHVGLTQEGGWGGRKYEQ
EILREVSRGCVAGGYAVVTSKVTCLVEEREGGRGGERAGGGVALALPSLR
LTVSAAHSQAELQGAVNVIRKVVGAALKKRKQSRG*
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Synonyms
Publications