NO18G01680, NO18G01680 (gene) Nannochloropsis oceanica

Overview
NameNO18G01680
Unique NameNO18G01680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2124
Alignment locationchr18:536450..538573 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:536450..538573 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO18G01680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR046ncniR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G01680.1NO18G01680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G01680.1NO18G01680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G01680 ID=NO18G01680|Name=NO18G01680|organism=Nannochloropsis oceanica|type=gene|length=2124bp
ATGAATTCCTTCGCCAGAACCAGCCCCTCACTTGTCATCTGCGTTGCCCC
CCACGGAGCTGGCGGCCGCTGGCGCGACCCGCACCTCGTGTCCGCTCCCT
CTTCCTTCACCGCTGATGCCAGCTCGGGACCGTCCACCACTACCACAGCT
CTTCACAATAGCACCGgtgcttcctctcttccaccatcgccctccctgat
gctgggcgtggatagcacgatttctcttatgaaatttattacgtgcaact
cctctcaagggagcatgacacgcatgacggagcagaacacttcatgatat
ccattgtcaaacatattcctgggattgcaagtcaggagaagagggtagag
gctttatcaagacaattacaaaaacgctctttcttcccgcgtccacgaaa
atggtcatgctccctttacatacaataccgcaataaggattgttactctt
tctagagcttaaattatttttatggcagtatatgtggtttatttgtttgt
ggcaaaggtttgtccacaaaaacctcctaacccccaaatggtgctcctct
tgtcttggcgtcctggttctcgacgttcatggttttattttcaatttaaa
aatcaagatagaaataatatgaggcgacgaccacctgggaagaaattact
tgggaacgccaaatgcacaacacggaggaaaaagacacattaagtcacgt
agtgaaatatgtagacctgattcttctttatcttttgtgcgacagGTCAA
GTGGCGGGGTGGAGCTTGCCAGTGCAACATCAGCACCAGCACCAACACCG
GCAGTGGGAGGAGGTGGAGGAGGAGGGGGAGGAAGAAGAGGGAAAAGAAC
CCGGGCTGCGGAAGCAGCAGCAGCCGCCCGGATGCGGCATGGCAGTCGCA
GAAGCACCAGCCCGGGCAGCTGCAGGAGGAGGAGGAGGGGGAAGGGATAG
CAGGATGGATACAGGAGGGGATTCTGGAAGGGTAGGATTGGGAGGAGTCG
GGGCGGCCGAAGCGGGAACAGGAGGAGGAGGAGAGGGAACGAGAGGAATA
CCTACTTTGCTCTCTTTACCCGGAGAAAATGCAACACGAGCACTAGAAAT
CATTGCTAGAATTCGTGCGGCACTTGCAAGAGGAAGGGAGAAGGGAAAGA
GAAAGATAGTGAGGGCGCTCCGACGAGGAGGAAGAGGGGGAGGGGAAGGA
GGGGGAGGACGAGGGGAAGGACGAGGGGAAAGAGGGGCAGGAGGACGAGG
GGAAAAAGGGGCAGGAGGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGAAGAGGAGGAAGAAGAGGTAGAGGAAGAAGAGGAA
GAAGAAGAGGAAGAGGAAGAGGAAGAAGAGGAAGAAAAAGACGAACAAAA
AGAAGAAGGAGGAGAGGAAGAAGAGGAAGAAGAAGACGAACAAGAAAAAG
AAGGAGGAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGA
AGAAGAAGAAGGAGGGGGAGGAGGAGGAGGGGGAGGAGGAGGAAGACGAG
GAGGGAGACGAGGAGGGGGTGGAAGGGGAAGGGGAGGAGGAGGAGGAGGC
GGTGGAAGCAGAGGAGGAGGGGGGGGGAATGAGGAGGAGGAGGAGAAGGG
GGAGGAGGAGGAAGGGAAAGGGGAGGAGGGGGCGGAGGCGGTGGAAGCAG
AGGAGGCGGAGGCGGAGGCGGAGGAGGCGGAGGAGGACGAGGACGAGGCA
GAGGAGGAGGTCATGGGCGGGCCATCCGAGGACTTTGTTGGTGTGACACC
TGTGAACAGTTCGTGTCTCGGGACGGCAATGGGGCACGCAACATCCTGCG
GGTGTACAGGAGTATGGTCCGTGGGGAAGCTCGTCTCCATGATCTTCGGT
TTGGTCAACCGCGGCAAGATATGCGGACACTCTATGTGTAGCGTTCCCGC
TGACCTCCTCTTTTATCCTCCTCCCCCTTCTCCTCCTGGCCCTGTGTGGG
CCGTCCGGGGACTTTGCCTGATCGAAAAACCTGTCAAAGTCGCTAGAAAA
ACTCGGACAAGAAATAAGGGGTGA
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protein sequence of NO18G01680.1

>NO18G01680.1-protein ID=NO18G01680.1-protein|Name=NO18G01680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=515bp
MNSFARTSPSLVICVAPHGAGGRWRDPHLVSAPSSFTADASSGPSTTTTA
LHNSTGQVAGWSLPVQHQHQHQHRQWEEVEEEGEEEEGKEPGLRKQQQPP
GCGMAVAEAPARAAAGGGGGGRDSRMDTGGDSGRVGLGGVGAAEAGTGGG
GEGTRGIPTLLSLPGENATRALEIIARIRAALARGREKGKRKIVRALRRG
GRGGGEGGGGRGEGRGERGAGGRGEKGAGGRGGGGGGGGGGGGGGEEEEE
EVEEEEEEEEEEEEEEEEEKDEQKEEGGEEEEEEEDEQEKEGGEEEEEEE
EEEEEEEEEEEEEEEEGEEEEEEEEEEGGGGGGGGGGGRRGGRRGGGGRG
RGGGGGGGGSRGGGGGNEEEEEKGEEEEGKGEEGAEAVEAEEAEAEAEEA
EEDEDEAEEEVMGGPSEDFVGVTPVNSSCLGTAMGHATSCGCTGVWSVGK
LVSMIFGLVNRGKICGHSMCSVPADLLFYPPPPSPPGPVWAVRGLCLIEK
PVKVARKTRTRNKG*
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Synonyms
Publications