NO18G01580, NO18G01580 (gene) Nannochloropsis oceanica

Overview
NameNO18G01580
Unique NameNO18G01580
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2239
Alignment locationchr18:511247..513485 -

Link to JBrowse

Properties
Property NameValue
DescriptionDynamin-like protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:511247..513485 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR000375Dynamin_central
IPR001401Dynamin_GTPase
IPR022812Dynamin_SF
Homology
BLAST of NO18G01580 vs. NCBI_GenBank
Match: EWM23365.1 (dynamin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 695.7 bits (1794), Expect = 1.500e-196
Identity = 398/745 (53.42%), Postives = 496/745 (66.58%), Query Frame = 0
Query:    2 FRSGRSKSRGKSLDATPTD------LTSLETHLTEKTDLIDDIKKVLPITVQASGIVAIGMQGAGKSTVLESLTGVPLSRASGLRRPVKVKIVCDPTCVKEYVLVSGSDPLFKQNTKRLENAADLPAALVKLNEQMNVAGSFR----PATGHFMEDKDEASDATIEEEE----RVYVEQPSRYMPDRH--SESITESSAGLIYVRVVRPSGPTYTIIDFPAFSCPPDAAQEAYLRRVLEEDEDPNKLILAVLSIKDVFDHADIIHLAKRLDPASKRTIGVVTKAHLVTKDMGIVEKLQMNSNKPLVLPLGYVAVCAADPNNSAANRQEVMQFEHAFFSSNPLLKGLRQERWGLASLKSLVLNYQKNGITQRLPELSQAIRTEIEELSADXXXXXXXXXXXXXXXXXXXXQGHPVAPAVVFDQFEDVFSRLCSEMTFVMFDVKELADNSSSRQDRKLNLGPRYQLAVEGREAEARRALPSYTSAEVAEWLNKEMGEFRGVIANANYLMHPVFRKAIRELVFPVLRVYARGVIQDMDDMLQYTAQELVGERFRPYTRLLEALMRDVTQVQAAKKEEAERLVGRLLEAELNWNFVDEVDLAFISQQIEKNVAANERGESAGRMEADDMWDALGVEXXXXXXXXXXXXXXXXXVARCFCSR-ATRESCRH----------------------------DLMSVVAAKYNDDIKLRALMSEELWAEQSRQQRAMRKAALEEVMGRLDLLS 702
            F  GR  SR KS  + P        L SLE  LTEKTDLIDD+KKVLPITVQA GIVAIGM+G+GKST+LE+L+GVPLS ASGL+RPV+VKIV DPTC KEYVLVSG+DPLFKQNT+RLE+A DLPA L  L++ +      R     A  + +ED    +  + EEEE    R  + + S Y         S       LIYVRVVRPSGPTYTI+DFPAFS PP A +EA L RVL ++ DP  L+LAV+ +KDVFD A+++ +AKRLDP SK+TIGVVTK HLVTK MGIVEKLQMN +K + LPLGYVAVCAADP N A   Q+V+ +E  FF++NPLLKGL+ ERWGL SLKSLV++ Q N ITQR+P LSQAIR+EIE+LS                       G       VF+  +DVFS+LCSEMT VMFD+ +LA+ SS+RQDRKLNLGPR+ +AVE REAEARRALP   S+EVA+WL  E+ EF GV +N++ +MHP+FRKA+REL FPVLR YA+ +I D+D+ML+Y A++++ ERF  Y+RL+E+L RDVTQVQ  KK EA+ L+ RLLEAELNW  VD VD+A I ++  K++  ++ G+   R    DMW   GV+                 +           +SC H                            D++SVV  KYN++ KLRALMSEELWA  SRQQ+A+R++ALEEVM +LDLLS
Sbjct:    7 FSGGRRSSRRKSASSRPNSVDWCAPLASLEACLTEKTDLIDDMKKVLPITVQAPGIVAIGMRGSGKSTILEALSGVPLSHASGLQRPVRVKIVSDPTCTKEYVLVSGTDPLFKQNTRRLEHARDLPACLAALDKDVRTDEVGRTQGMKAETNPVEDAGTPTSISQEEEEAENIREELSEQSSYFTGLGGVGSSGPAEDLRLIYVRVVRPSGPTYTIMDFPAFSSPPRAEEEACLNRVLAKERDPASLVLAVMPVKDVFDRAEVLQIAKRLDPGSKQTIGVVTKMHLVTKGMGIVEKLQMNGSKAVALPLGYVAVCAADPGNPAGTYQDVLDYEAKFFTTNPLLKGLKPERWGLTSLKSLVIHCQTNSITQRIPGLSQAIRSEIEDLSRTCVQNDERIEQKATTPRKKKSLG-------VFENTKDVFSKLCSEMTLVMFDINDLANGSSTRQDRKLNLGPRFLIAVETREAEARRALPVCNSSEVADWLWGELQEFGGVASNSDSIMHPIFRKAVRELFFPVLRGYAKSIIDDLDEMLKYAAEKMLEERFGAYSRLVESLTRDVTQVQETKKREADALIARLLEAELNWVLVDAVDMAHIEKETAKDMENSKTGDRGER--RSDMWGMEGVDEEQRESKLNKSKSGKVFMQSDHRGELQAMQSCLHQYVHLLLRRMFYAVPMNTRNVMINEFRDDVLSVVTGKYNEETKLRALMSEELWAGHSRQQQAVRRSALEEVMNKLDLLS 742          
BLAST of NO18G01580 vs. NCBI_GenBank
Match: EWM23366.1 (dynamin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 363.2 bits (931), Expect = 1.800e-96
Identity = 246/726 (33.88%), Postives = 361/726 (49.72%), Query Frame = 0
Query:   20 DLTSLETHLTEKTDLIDDIKKVLPIT--VQASGIVAIGMQGAGKSTVLESLTGVPLSRASG---LRRPVKVKIVCDPTCVKEYVLVSGSDPLFKQ---NTKRLENAADLPAALVKLNEQMNVAGSFRPATGHFMEDKDEASDATIEEEERVYVEQPSRYMPDRHSESITESSAGLIYVRVVRPSGPTYTIIDFPAFSCPPDAAQEAYLRRVLEEDEDPNKLILAVLSIKDVFDHADIIHLAKRLDPASKRTIGVVTKAHLVTKDMGIVEKLQMNSNKPLVLPLGYVAVCAADPNNSAANRQEVMQFEHAFFSSNPLLKGLRQERWGLASLKSLVLNYQKNGITQRLPELSQAIRTEIEELSADXXXXXXXXXXXXXXXXXXXXQGHPVAPAVVFDQFEDVFSRLCSEMTFVMFDVKELADNSSSRQDRKLNLGPRYQLAVEGREAEARRALPSYTSAEVAEWLNKE--MGEFRGVIANANYLMHPVFRKAIRELVFPVLRVYARGVIQDMDDMLQYTAQELVGERFRPYTRLLEALMRDVTQVQAAKKEEAERLVGRLLEAELNWNFVDEVDLAFISQQIEKNVAA----------------------------------NERGESAGRMEADDMWDALGVEXXXXXXXXXXXXXXXXXVARCFCSRATRESCRHDLMSVVAAKYNDDIKLRALMSEELWAEQSRQQRAMRKAALEEVMGRLDLLS 702
            +L  LE  L  KTDLIDD+  + P+   ++A GIV IG QGAGKS+VL+ LTG+P    +G    +RP+K+ I  DPT  + Y LVS  DP       NTK ++   +L   L  LNE                                             HSE   E+    IYV+VVRPSG  Y+++D P  +   D     +   +L   +DP+ +IL VL + D+FD A  + LAKR+DP  +RTIGVVTK  LV KDM  VEK+QM S   + LPLGY+AV +A       +R++++Q E AFF+SNPLL GLR ERWG  +LK LV++ Q N I Q +P++++ +  E++EL  +                    +G     A      +D F++LC +   + F++ ELA +SS+RQ+R LNLG R   A+   E EARRALP+  + +V  WL+ E        +  +   + H VFRK+IRE+  PVL  YA  ++ +    L+     LV E+F  +  L+++L  +V  +   KK + E+++ R++ +E+NW F+ E DL  + +++  N+A                                   + R E  G++   D      +                                RH+L+S+VA KYND+ KLR +MSEELW  Q RQQR  RK +L +++ +LDLLS
Sbjct:   88 ELDVLEAPLKVKTDLIDDLSILWPLNQQIKAPGIVVIGAQGAGKSSVLQLLTGMPFIYCTGSDSTKRPIKMNITTDPTTDETYTLVSTVDPECSPEDGNTKHVKKLEELSRLLAHLNEN------------------------------------------PEHSE--VEARKQPIYVKVVRPSGAAYSVMDLPGIN-EEDPESVRFTEDILH--QDPSCVILVVLPLTDIFDRAFPVALAKRVDPEGRRTIGVVTKTDLVQKDMDAVEKVQMTSQPGVNLPLGYIAVRSAAEKEKNESRRQILQREQAFFTSNPLLAGLRPERWGSTTLKRLVVDCQSNAIGQSIPKVTRLLHKELQELDNE--------EEKAAEALGWKDRGQSQGRAKPLSDHQDFFTKLCLDANTLGFEIGELALSSSTRQERHLNLGARLAAAITFHENEARRALPASVAEKVGSWLDVEGFASSEPRIYVSRETMSHDVFRKSIREVCGPVLMHYATALLTETGQQLEEVTHVLVQEKFTGFPWLVQSLKHEVNLLLGKKKVDTEKVLQRIVTSEMNWCFLSEADLNAVEREVALNMAGKSSGGLGMGKVAPAEEAKGSGLHWSAEMSDVLSPSTRAEEGGKLSRFDPTREARMRELTLDAYVRLMLRRVFYAVPMNIRNVMLNEFRHELVSMVAEKYNDEAKLRTVMSEELWRVQQRQQRTERKESLTDLLHKLDLLS 758          
BLAST of NO18G01580 vs. NCBI_GenBank
Match: XP_005853927.1 (dynamin-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU22433.1 dynamin-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 317.8 bits (813), Expect = 8.600e-83
Identity = 208/571 (36.43%), Postives = 303/571 (53.06%), Query Frame = 0
Query:   20 DLTSLETHLTEKTDLIDDIKKVLPIT--VQASGIVAIGMQGAGKSTVLESLTGVPLSRASG---LRRPVKVKIVCDPTCVKEYVLVSGSDPLFKQ---NTKRLENAADLPAALVKLNEQMNVAGSFRPATGHFMEDKDEASDATIEEEERVYVEQPSRYMPDRHSESITESSAGLIYVRVVRPSGPTYTIIDFPAFSCPPDAAQEAYLRRVLEEDEDPNKLILAVLSIKDVFDHADIIHLAKRLDPASKRTIGVVTKAHLVTKDMGIVEKLQMNSNKPLVLPLGYVAVCAADPNNSAANRQEVMQFEHAFFSSNPLLKGLRQERWGLASLKSLVLNYQKNGITQRLPELSQAIRTEIEELSADXXXXXXXXXXXXXXXXXXXXQGHPVAPAVVFDQFEDVFSRLCSEMTFVMFDVKELADNSSSRQDRKLNLGPRYQLAVEGREAEARRALPSYTSAEVAEWLNKE---MGEFRGVIANANYLMHPVFRKAIRELVFPVLRVYARGVIQDMDDMLQYTAQELVGERFRPYTRLLEALMRDVTQVQAAKKEEAERLVGRLLEAELNWNFVDE 580
            +L  LE  L  KTDLIDD+  + P+   ++A GIV IG QGAGKS+VL+ LTG+P    +G    +RP+K+ I  DPT  + Y LVS  DP       NTK ++   +L   L  LNE                                             HSE   E+    IYV+VVRPSG  Y+++D P  +   D     +   +L   +DP+ +IL VL + D+FD A  + LAKR+DP  +RTIGVVTK  LV KDM  VEK+QM S   + LPLGY+AV +A       +R++++Q E AFF+SNPLL GLR ERWG  +LK LV++ Q N I Q +P++++ +  E++EL  +                    +G     A      +D F++LC +   + F++ ELA +SS+RQ+R LNLG R   A+   E EARRALP+  + +V  WL  E     E R  ++    + H VFRK+IRE+  PVL  YA  ++ +    L+     LV E+F  +  L+++L  +V  +   KK + E+++ R++ +E+NW F+ E
Sbjct:   54 ELDVLEAPLKVKTDLIDDLSILWPLNQQIKAPGIVVIGAQGAGKSSVLQLLTGMPFIYCTGSDSTKRPIKMNITTDPTTDETYTLVSTVDPECSPEDGNTKHVKKLEELSRLLAHLNEN------------------------------------------PEHSE--VEARKQPIYVKVVRPSGAAYSVMDLPGIN-EEDPESVRFTEDILH--QDPSCVILVVLPLTDIFDRAFPVALAKRVDPEGRRTIGVVTKTDLVQKDMDAVEKVQMTSQPGVNLPLGYIAVRSAAEKEKNESRRQILQREQAFFTSNPLLAGLRPERWGSTTLKRLVVDCQSNAIGQSIPKVTRLLHKELQELDKE--------EEKAAEALGWKDRGQSQGRAKPLSDHQDFFTKLCLDANTLGFEIGELALSSSTRQERHLNLGARLAAAITFHENEARRALPASVAEKVGSWLEVEDFASSEPRTYVSRET-MSHDVFRKSIREVCGPVLMHYATALLTETGQQLEEVTHVLVQEKFTGFPWLVQSLKHEVNLLLGKKKVDTEKVLQRIVTSEMNWCFLSE 568          
BLAST of NO18G01580 vs. NCBI_GenBank
Match: KOO31231.1 (dynamin-like protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 141.0 bits (354), Expect = 1.400e-29
Identity = 100/320 (31.25%), Postives = 152/320 (47.50%), Query Frame = 0
Query:  187 IYVRVVRPSGPTYTIIDFPAFSCPPDAAQ----EAYLRRVLEEDEDPNKLILAVLSIKDVFDHADIIHLAKRLDPASKRTIGVVTKAHLVTKDMGIVEKLQMNSNKPLVLPLGYVAVCAADPN--NSAANRQEVMQFEHAFFSSNPLLKGLRQERWGLASLKSLVLNYQKNGITQRLPELSQAIRTEIEELSADXXXXXXXXXXXXXXXXXXXXQGHPVAPAVVFDQFEDVFSRLCSEMTFVMFDVKELADNSSSRQDRKLNLGPRYQLAVEGREAEARRALPSYTSAEVAEWLNKEMGEFRGVIANANYLMHPVFRKAI 501
            IYV VVRPSGPT+T+ID P  +      Q    E     V    +DPN +IL V+   D F +A+ + LAK+ DP   RT+GVVTK+ L+  D  IV++++M   K + L LG++A+    P        R E M  EH  F  + LL  L   +WGL +L   ++  Q N +   +PE+ Q + T + E  A                     +   +APA   D      SR+   +  +  D+ ++   +    D+KL+L   +    E        A P Y SAE  E L   + E +GV +  N++M+P+FRK++
Sbjct:   13 IYVTVVRPSGPTFTLIDIPGITHMTADGQADVHEITKGMVESYIKDPNMVILVVIPATDDFGNAEALKLAKKYDPYGLRTLGVVTKSDLIKPDSDIVQRIKM-EGKNIQLELGFIALRCRTPGEVKEGITRAEAMASEHRLFEKDELLSQLAPAQWGLRTLVRQIVAVQANRVEAFIPEIKQLLSTRLMEAEA---------------------EAERLAPACASDAARS--SRMNEMIRRIDLDLHDILTGARHFDDKKLHLPTVWVDLAEEFGQVIHSATPDYLSAEYKEMLKVSLKEVQGV-SPQNFMMYPIFRKSL 307          
BLAST of NO18G01580 vs. NCBI_GenBank
Match: CBJ32499.1 (DRP, dynamin-related protein [Ectocarpus siliculosus])

HSP 1 Score: 100.9 bits (250), Expect = 1.600e-17
Identity = 127/572 (22.20%), Postives = 232/572 (40.56%), Query Frame = 0
Query:   24 LETHLTEKTDLIDDIKKVLPIT--VQASGIVAIGMQGAGKSTVLESLTGVPLSRASGL--RRPVKVKIVCDPTCVKEYVLVSGSDPLFKQNTKRLENAADLPAALVKLNEQMNVAGSFRPATGHFMEDKDEASDATIEEEERVYVEQPSRYMPDRHSESITESSAGLIYVRVVRPSGPTYTIIDFPAFS-CPPDAAQEAY---LRRVLEEDEDPNKLILAVLSIKDVFDHADIIHLAKRLDPASKRTIGVVTKAHLVTKDMGIVEKLQMNSNKPLVLPLGYVAVCAADPNNSAANRQEVMQFEHAFFSSNPLLKGLRQERWGLASLKSLVLNYQKNGITQRLPELSQAIRTEIEELSADXXXXXXXXXXXXXXXXXXXXQGHPVAPAVVFDQFEDVFSRLCSEMTFVMFDVKELADNSSSR----QDRKLNLGPRYQLAVEGREAEAR-RALPSYTSAEVAEWLNKEMGEFRGV--IANANYLMHPVFRKAIRELVFPVLRVYARGVIQDMDDMLQYTAQELVGERFRPYTRLLEALMRD-VTQVQAAKKEEAERLVGRLLEAELNWNFVDE 580
            +E  L+ +   ++ ++ +L     V+  G+V  G Q AGKS+VLE+L G+ L R   +  R P+ + +V  P   + + ++ G   L K    ++    ++   + +L  ++                   A D                          T  SA  IY++++RPSGPT T+ID P  +   PD  Q+ +   +  V +  E+ N +IL V+   D F +A+ I LAK+ DP  +RT+GVVTK           + +++  + P                      +EV   E  FF +N  + G+ +E WG  +L   ++  Q   + Q +P+     +   +EL+                      Q     P  VF    +++ +    ++ +  ++K+L    S+R    QD  +++ P      +      R   +P++ +    E+  K    F+ V  +A  N L   VF     E+    L V +  +++ + D +Q T  +L       +  LL  L  + V Q   +K+   +  V  +++AEL W F  +
Sbjct:   11 IENRLSGELGALEQLRALLQNNEEVKIPGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLVLSLVAVPG-AEPHAVIGGQADLSK---GKIIGIDEISTDIERLTNEL-------------------AGDG-------------------------TAVSAKPIYLKIIRPSGPTLTLIDLPDITHNSPDGTQDIHTETVNLVKKFIENDNMVILVVIPAMDDFANAEAIALAKKYDPDGRRTLGVVTK----------TDNIKVEEDTP---------------------AEEVRARERQFFQTNSEMAGIEKEYWGFDTLVGRIVEIQAERVQQFIPKFLAQSKRRTKELA----------------------QALRDMPK-VFSNDNELWEKFRKVVSTIREELKDLLTFGSNRAITGQDESMDIIPHVTAMYKAYATGIRDDVVPNFFT---DEYHQKVCAAFKRVDGMALPNLLGGRVFSALFCEIFSEELGVRSEKLVEGVKDFMQDTLGKLCDHTCAAHPVLLNELKTNLVEQFVDSKEASTKSAVENIVKAELGWVFTQD 477          
BLAST of NO18G01580 vs. NCBI_GenBank
Match: XP_004830817.1 (dynamin, putative [Theileria equi] >AFZ81151.1 dynamin, putative [Theileria equi strain WA])

HSP 1 Score: 89.7 bits (221), Expect = 3.800e-14
Identity = 91/365 (24.93%), Postives = 146/365 (40.00%), Query Frame = 0
Query:   24 LETHLTEKTDLIDDIKKV-LPITVQASGIVAIGMQGAGKSTVLESLTGVP-LSRASGL--RRPVKVK------IVCDPTCVKEYVLVSGSDPLFKQNTKRLENAADLPAALVKLNEQMNVAGSFRPATGHFMEDKDEASDATIEEEERVYVEQPSRYMPDRHSESITESSAGLIYVRVVRPSGPTYTIIDFPAFSCPP-------DAAQEAYLRRVLEEDEDPNKLILAVLSIKDVFDHADIIHLAKRLDPASKRTIGVVTKAHLVTKDMGIVEKLQMNSNKPLVLPLGYVAVCAADPNNSA--ANRQEVMQFEHAFFSSNPLLKGLRQERWGLASLKSLVLNYQKNGITQRLPELSQAIRTEIE 370
            + ++L +   L+D+++ + L   +    I   G Q +GKS+VLES+ G+  L R  G+  RRP++ +      I  D T  K Y++  G+D  F    +      DL       N+ +                                V+ P                   I + V  P  P  ++ID P  +  P       D  +      ++    DP  +ILAV++       +D + LA+R DP   RT+GV+TK  L+ +       LQ   N  + L LGY  V      + A     +E ++ EHAFFS + + + L    WG+ SL + + N     I+  LPEL   I   I+
Sbjct:    5 MNSNLRQLISLVDNLRDIGLHKYINLPRICVAGTQSSGKSSVLESIVGIDFLPRGDGIVTRRPIEFRLNRLTDIAEDGTKPKPYIVFEGNDEKFYDFERARSYIQDLTNQRAGTNKGI--------------------------------VDDP-------------------IVLSVYSPDCPDLSLIDLPGVTRVPLKNSDQTDDIEMLTKEMIMRYASDPRTIILAVVAANVDMSTSDALQLARRADPQGIRTLGVITKIDLMDRGASAYSMLQ---NDEVPLRLGYTGVKNRSQQDIAEGVTIEEALKREHAFFSEHKIYRNLNPSLWGVGSLVNKLTNVLLRHISTVLPELKAEILNRIK 315          
BLAST of NO18G01580 vs. NCBI_GenBank
Match: OLP81297.1 (Dynamin-related protein 4C [Symbiodinium microadriaticum])

HSP 1 Score: 89.7 bits (221), Expect = 3.800e-14
Identity = 84/333 (25.23%), Postives = 141/333 (42.34%), Query Frame = 0
Query:   50 GIVAIGMQGAGKSTVLESLTGVPLSRASG--LRRPVKVKIVCDPTCVKEYVLVSGSDPLFKQNTKRLENAADLPAALVKLNEQMNVAGSFRPATGHFMEDKDEASDATIEEEERVYVEQPSRYMPDRHSESITESSAGLIYVRVVRPSGPTYTIIDFPAFSCPPDA---AQEAYLRRVLEEDEDPNKLILAVLSIKDVFDHADIIHLAKRLDPASKRTIGVVTK----AHLVTKDMGIVEKLQMNSNKPLVLPLGYVAVCAADPNN--SAANRQEVMQFEHAFFSSNPLLKGLRQERWGLASLKSLVLNYQKNGITQRLPELSQAIRTEIEEL 372
            G+V +G Q AGKS++LE+++G+   RA     R P  + ++ DPT  + + LVS                               +  SF  A    + D                VE   + + D+H+      S   +Y+RVVR  G   ++ID P  +   +      E  +  V E  E    +IL V+     F +A+++ LA+  DP   RT+GVVTK    A+    D  IVEK+ M+ +  + L  G+  V      N     +R+++ Q E   F+++   + L    WG   L   V   Q+  + + LP++ +++R    +L
Sbjct:   56 GVVVVGEQSAGKSSLLENISGIQFPRAQNTCTRMPCVLTMLTDPTVNESFALVS-------------------------------MDSSFTDAKRCAVAD----------------VEGQIKELTDQHTTGAAFISTEALYIRVVRRDGLQLSLIDLPGVTHNAEKMSNIHEVTVSLVKEYIEPEEMVILCVIPAMSDFGNAEVVKLAREYDPEGIRTLGVVTKCDDAANAEASD--IVEKVTMSRDSDVRLAFGFHCVVNRSQKNIDEGMSREDLWQKEEKTFTASD--RKLPANNWGTLRLMEKVAKIQEARVDECLPKIKESVRQRTIQL 337          
BLAST of NO18G01580 vs. NCBI_GenBank
Match: ORY75219.1 (hypothetical protein LY90DRAFT_401332 [Neocallimastix californiae])

HSP 1 Score: 89.0 bits (219), Expect = 6.500e-14
Identity = 94/373 (25.20%), Postives = 165/373 (44.24%), Query Frame = 0
Query:    8 KSRGKSLDATPTDLTSLETHLTEKTDLIDDIKKVLPITVQASGIVAIGMQGAGKSTVLESLTG---VPLSRASGLRRPVKVKIVCDPTCVKEYVLVSGSDPLFKQNTKRLENAADLPAALVKLNEQMNVAGSFRPATGHFMEDKDEASDATIEEEERVYVEQPSRYMPDRHSESITESSAGLIYVRVVRPSGPTYTIIDFPAFSCPPDAAQEAYLRRVLEE--DE---DPNKLILAVLSIKDVFDHADIIHLAKRLDPASKRTIGVVTKAHLVTKDMGIVEKLQMNSNKPLVLPLGYVAVCAADPNNSAANRQ-EVMQFEHAFFSSNPLLKGLRQERWGLASLKSLVLNYQKNGITQRLPELSQAIRTEIEEL 372
            K    +L++   D   L   L E  +++  + +     +Q   IV IG Q +GKS+VLE++ G   +P       RRP+++ +V  P   +EY    G  P  +   K + +   +   L +LN                          ++ E E +                    S   I +R+  P+ P  T+ID P +    +  Q   L+R + E  D+   +PN +ILA+ S      +++ +  ++++DP  +RTIGV+TK  LV  + G+   L +N++ P  L LGYV +    P  S  +RQ  + Q    +F +NP+       + GL++LK  +    +  + Q L  +  A++TE+EE+
Sbjct:   21 KGSSSALNSNQDDFMMLTKQLIEVRNILKTVNQNCS-ALQLPSIVVIGSQSSGKSSVLEAIVGHEFLPKGNNMVTRRPIELTLVHTPNAEEEY----GEFP--EIGMKNMTDFTQIQRTLSELN-------------------------MSVSESECI--------------------STDPIELRIYSPNVPDLTLIDLPGYIQVINRKQPPILKRKIVELCDKYIVEPN-IILAISSADVDLANSEALTHSRKVDPYGRRTIGVITKMDLVEPEKGV--DLLINNDYP--LELGYVGMVCKPPGKSGFSRQLSLTQKSDQYFRNNPIFH-QPDVQVGLSALKKRLTTILEENMGQNLYGIVDAVQTELEEV 335          
BLAST of NO18G01580 vs. NCBI_GenBank
Match: ORX77503.1 (hypothetical protein BCR32DRAFT_207855 [Anaeromyces robustus])

HSP 1 Score: 87.4 bits (215), Expect = 1.900e-13
Identity = 99/378 (26.19%), Postives = 164/378 (43.39%), Query Frame = 0
Query:    3 RSGRSKSRGKSLDATPTDLTSLETHLTEKTDLIDDIKKVLPITVQASGIVAIGMQGAGKSTVLESLTG---VPLSRASGLRRPVKVKIVCDPTCVKEYVLVSGSDPLFKQNTKRLENAADLPAALVKLNEQMNVAGSFRPATGHFMEDKDEASDATIEEEERVYVEQPSRYMPDRHSESITESSAGLIYVRVVRPSGPTYTIIDFPAFSCPPDAAQEAYLRRVLEEDED-----PNKLILAVLSIKDVFDHADIIHLAKRLDPASKRTIGVVTKAHLVTKDMGIVEKLQMNSNKPLVLPLGYVAVCAADPNNSAANRQ-EVMQFEHAFFSSNPLLKGLRQERWGLASLKSLVLNYQKNGITQRLPELSQAIRTEIEEL 372
            ++G+  +   SL++   D   L   L E  +++  + +     +Q   IV IG Q +GKS+VLE++ G   +P       RRP+++ +V  P   +EY    G  P    N     N  D                        F + +   SD  +   E               SE I   S   I +++  P+ P  T+ID P +    +  Q   L+R + E  D     PN +ILA+ S      +++ +  ++++DP  KRTIGV+TK  LV  + G+   L +N++ P  L LGYV +    P  S  +RQ  + Q    +F SNP+       + GL +LK  +    +  + Q L  +  A++ E+EE+
Sbjct:   18 KNGKGGNNSTSLNSNQDDFMMLTKQLIEVRNILKTVNQNCS-ALQLPSIVVIGSQSSGKSSVLEAIVGHEFLPKGNNMVTRRPIELTLVHTPNAEEEY----GEFPEIGIN-----NVTD------------------------FTQIQRTLSDLNMSVSE---------------SECI---STDPIELKIYSPTVPDLTLIDLPGYIQVINRKQPPILKRKIVELCDRYIVEPN-IILAISSADVDLANSEALTHSRKVDPYGKRTIGVITKMDLVDPEKGV--DLLINNDYP--LELGYVGMVCKPPGKSGFSRQLSLTQKSDQYFRSNPIFH-QPDVQVGLTALKKRLTTILEENMGQNLYGIVDAVQNELEEV 337          
BLAST of NO18G01580 vs. NCBI_GenBank
Match: XP_002551921.1 (KLTH0B03058p [Lachancea thermotolerans CBS 6340] >CAR21483.1 KLTH0B03058p [Lachancea thermotolerans CBS 6340])

HSP 1 Score: 85.1 bits (209), Expect = 9.400e-13
Identity = 94/358 (26.26%), Postives = 157/358 (43.85%), Query Frame = 0
Query:   33 DLIDDIKKVLPI-------TVQASGIVAIGMQGAGKSTVLESLTGVP-LSRASGL--RRPVKVK---IVCDPTCVKEYVLVSGSDPLFKQNTKRLENAADLPAALVKLNEQMNVAGSFRPATGHFMEDKDEASDATIEEEERVYVEQPSRYMPDRHSESITESSAGL----IYVRVVRPSGPTYTIIDFPAFSCPPDAAQEAYLRR-----VLEEDEDPNKLILAVLSIKDVFDHADIIHLAKRLDPASKRTIGVVTKAHLVTKDMGIVEKLQMNSNKPLVLPLGYVAVCAADPNNSAANR--QEVMQFEHAFFSSNPLLKGLRQERWGLASLKSLVLNYQKNGITQRLPELSQAIRT 367
            DLI  + K+  +       T+    +  IG Q +GKS++LE+L G   L R +G+  RRP+ ++   I  +   + EY  + G      QN    +   +L      L + +  +  F P T      KDE  +       R Y     R   +  +  I   + G+    I ++V  P     T++D P  +  P   Q A + +     +LE    PN +ILA+        +++ + LA+ +DP  KRTIGV+TK  L+  D G    L + S K   L LG+V +      +  ANR  +E +  E  FF+ +P+ + +   + G   L  L+ +   N I  +LP++   + T
Sbjct:    6 DLIPTVNKLQDVMYDAGIDTLDLPVLAVIGSQSSGKSSILETLVGKDFLPRGTGIVTRRPLVLQLNNISPNSPLINEYQDIHG------QNYDTSDTKGEL-----TLEDHLRKSQGFEPTT------KDEWGEFLHLPGRRFYDFGEIRQEIENETARIAGKNKGISRIPINLKVFSPRVLNLTLVDLPGITKVPIGEQPADIEKQIKNLILEHVAKPNCIILAISPANVDLVNSESLKLARDVDPHGKRTIGVITKMDLM--DSG-TNALDILSGKLYPLKLGFVGIVNRSQQDIQANRSVEEALNNEEIFFTRHPVYRTI-STKCGTRYLAKLLNHILMNHIRDKLPDIKARLNT 342          
The following BLAST results are available for this feature:
BLAST of NO18G01580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23365.11.500e-19653.42dynamin-like protein [Nannochloropsis gaditana][more]
EWM23366.11.800e-9633.88dynamin-like protein [Nannochloropsis gaditana][more]
XP_005853927.18.600e-8336.43dynamin-like protein, partial [Nannochloropsis gad... [more]
KOO31231.11.400e-2931.25dynamin-like protein [Chrysochromulina sp. CCMP291... [more]
CBJ32499.11.600e-1722.20DRP, dynamin-related protein [Ectocarpus siliculos... [more]
XP_004830817.13.800e-1424.93dynamin, putative [Theileria equi] >AFZ81151.1 dyn... [more]
OLP81297.13.800e-1425.23Dynamin-related protein 4C [Symbiodinium microadri... [more]
ORY75219.16.500e-1425.20hypothetical protein LY90DRAFT_401332 [Neocallimas... [more]
ORX77503.11.900e-1326.19hypothetical protein BCR32DRAFT_207855 [Anaeromyce... [more]
XP_002551921.19.400e-1326.26KLTH0B03058p [Lachancea thermotolerans CBS 6340] >... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR046ncniR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G01580.1NO18G01580.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|223118gene_8851Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G01580.1NO18G01580.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G01580 ID=NO18G01580|Name=NO18G01580|organism=Nannochloropsis oceanica|type=gene|length=2239bp
CCACAGTATACACAGTCCATTGCAATCTCACCATGTTTCGCTCGGGCAGG
TCAAAGTCGCGGGGCAAGTCCCTCGACGCCACTCCCACGGACTTGACCAG
CCTGGAGACGCACTTGACGGAAAAGACGGATCTGATCGACGACATTAAAA
AGGTACTCCCCATTACCGTGCAAGCATCGGGCATCGTGGCCATCGGCATG
CAGGGCGCGGGCAAGTCCACCGTCCTCGAATCCCTGACTGGCGTGCCTTT
GTCACGGGCAAGCGGGCTGCGACGCCCTGTCAAGGTCAAGATTGTCTGCG
ATCCCACCTGCGTCAAGGAATATGTCCTCGTCAGTGGCAGTGACCCTCTA
TTCAAGCAAAATACGAAGCGTCTGGAAAACGCGGCTGATTTGCCTGCGGC
GCTTGTCAAACTCAACGAGCAGATGAACGTGGCTGGAAGCTTCCGACCGG
CTACAGGTCATTTTATGGAAGACAAAGATGAGGCCTCGGATGCCACCATC
GAGGAAGAGGAGAGAGTGTACGTTGAGCAACCATCACGCTACATGCCAGA
TCGCCATAGCGAGTCGATCACCGAGAGTAGTGCTGGGTTGATATATGTGC
GCGTCGTGCGTCCCTCCGGCCCCACCTACACCATCATTGACTTCCCTGCT
TTCAGCTGTCCGCCCGACGCTGCACAAGAAGCTTATCTTCGCCGCGTTTT
AGAGGAAGATGAGGATCCCAACAAGCTCATTTTGGCCGTTCTGTCAATCA
AGGACGTGTTTGACCATGCTGACATCATCCATCTCGCCAAGCGCCTCGAC
CCTGCTTCCAAGCGCACTATCGGGGTCGTGACCAAAGCACACCTGGTCAC
CAAAGACATGGGGATCGTCGAAAAGCTGCAAATGAACAGCAACAAGCCCC
TTGTCCTTCCACTGGGTTATGTGGCCGTCTGTGCCGCGGACCCCAACAAC
TCTGCGGCTAATCGACAGGAAGTTATGCAATTTGAACATGCCTTCTTCTC
GTCCAACCCCTTGCTGAAAGGTCTACGACAGGAGAGGTGGGGATTGGCCT
CTCTCAAGTCGTTGGTATTGAATTATCAGAAGAATGGTATCACACAGCGC
CTTCCAGAGCTGAGCCAGGCGATACGAACAGAGATTGAGGAGTTGAGCGC
AGACCTCCACCAGGAGCAGTACCATCACCAGCACGCGCACCAGCAGAAGC
ACATGAGTAAGGCGCAAGGACATCCGGTGGCCCCTGCTGTTGTTTTTGAT
CAGTTTGAGGACGTGTTTAGTAGGCTGTGTTCGGAGATGACCTTCGTTAT
GTTTGATGTGAAGGAGTTGGCCGACAACAGTAGTTCGCGGCAAGACCGCA
AGCTTAATCTGGGGCCTCGATACCAACTTGCAGTGGAAGGGAGGGAAGCC
GAGGCCAGGAGGGCGTTGCCTAGCTATACATCTGCAGAGGTGGCTGAGTG
GTTGAATAAGGAGATGGGGGAGTTTAGGGGGGTGATTGCGAATGCGAATT
ATCTGATGCATCCTGTCTTTAGGAAGGCGATTCGTGAGTTGGTTTTCCCT
GTGTTGCGAGTGTATGCGAGGGGGGTGATCCAGGATATGGACGATATGCT
TCAGTACACGGCGCAGGAGCTGGTGGGGGAGAGGTTCAGGCCGTATACGC
GGCTGCTTGAGGCGTTGATGAGGGATGTGACGCAGGTACAGGCGGCGAAG
AAGGAAGAGGCAGAAAGGTTGGTGGGGAGGCTGTTAGAAGCGGAGCTGAA
TTGGAATTTTGTCGATGAAGTGGATTTGGCGTTCATTTCACAACAAATTG
AGAAGAATGTGGCGGCCAACGAGAGAGGAGAGAGTGCGGGGAGGATGGAG
GCGGATGACATGTGGGATGCGCTCGGGGTGGAGGGGGGGGCTGGAGGGGG
GGCGGGGGGAGAGGGGGGCTGGGGAGGAGCAAAAGTGGCAAGGTGTTTTT
GCAGTCGAGCCACTCGAGAGAGCTGCAGgtgatgcagtgcacgcttcatt
actatgtgcagttgctactgcggcgtgtattctatgcgattccgacgaat
acgaggaacgttatgatcaatgagttcagGCATGATCTGATGTCTGTCGT
GGCGGCCAAGTATAACGACGATATCAAGCTCCGCGCGCTCATGTCTGAAG
AGCTGTGGGCCGAACAGAGCCGCCAGCAGCGCGCTATGCGCAAGGCAGCG
TTGGAGGAGGTGATGGGCAGGTTGGACTTGCTGTCGTAG
back to top

protein sequence of NO18G01580.1

>NO18G01580.1-protein ID=NO18G01580.1-protein|Name=NO18G01580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=702bp
MFRSGRSKSRGKSLDATPTDLTSLETHLTEKTDLIDDIKKVLPITVQASG
IVAIGMQGAGKSTVLESLTGVPLSRASGLRRPVKVKIVCDPTCVKEYVLV
SGSDPLFKQNTKRLENAADLPAALVKLNEQMNVAGSFRPATGHFMEDKDE
ASDATIEEEERVYVEQPSRYMPDRHSESITESSAGLIYVRVVRPSGPTYT
IIDFPAFSCPPDAAQEAYLRRVLEEDEDPNKLILAVLSIKDVFDHADIIH
LAKRLDPASKRTIGVVTKAHLVTKDMGIVEKLQMNSNKPLVLPLGYVAVC
AADPNNSAANRQEVMQFEHAFFSSNPLLKGLRQERWGLASLKSLVLNYQK
NGITQRLPELSQAIRTEIEELSADLHQEQYHHQHAHQQKHMSKAQGHPVA
PAVVFDQFEDVFSRLCSEMTFVMFDVKELADNSSSRQDRKLNLGPRYQLA
VEGREAEARRALPSYTSAEVAEWLNKEMGEFRGVIANANYLMHPVFRKAI
RELVFPVLRVYARGVIQDMDDMLQYTAQELVGERFRPYTRLLEALMRDVT
QVQAAKKEEAERLVGRLLEAELNWNFVDEVDLAFISQQIEKNVAANERGE
SAGRMEADDMWDALGVEGGAGGGAGGEGGWGGAKVARCFCSRATRESCRH
DLMSVVAAKYNDDIKLRALMSEELWAEQSRQQRAMRKAALEEVMGRLDLL
S*
back to top
Synonyms
Publications