NO18G01480, NO18G01480 (gene) Nannochloropsis oceanica

Overview
NameNO18G01480
Unique NameNO18G01480
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4277
Alignment locationchr18:486291..490567 +

Link to JBrowse

Properties
Property NameValue
DescriptionDynamin like protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:486291..490567 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR030381G_DYNAMIN_dom
IPR000375Dynamin_central
IPR001401Dynamin_GTPase
IPR022812Dynamin_SF
Homology
BLAST of NO18G01480 vs. NCBI_GenBank
Match: EWM23355.1 (dynamin like protein [Nannochloropsis gaditana])

HSP 1 Score: 974.5 bits (2518), Expect = 1.800e-280
Identity = 543/643 (84.45%), Postives = 569/643 (88.49%), Query Frame = 0
Query:   56 LPAAAVLASLDSSRGLGPGSSNPELPPSLRVPKPPRADLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHDRGMQQLIPIVNKLQDVFAAIGKHPLDLPQIVVIGSQSSGKSSVLEHIVGRDFLPRGTGIVTRRPLILQLYNTAFLRGAGEDD-GGREGAHGGPEGKEWGEFLHRAGERFYDFMEIREEIKKETDRLTGKNKGISAKSINLKIYSPYVLNLTLVDLPGITKVSVGDQPVDIEAQIREMCLAYIANPNSIVLAVTAANTDIANSDSLKLAREVDPEGLRTIGVLTKMDLMDPGTDAADVLLNRVIPLRIGYVAVVNRGQRDIDNNLTIREALRRESSFFKAHPVYRSLLKQCTTPTLTRMLNNILMHHIRDCLPEIKSRIQAMTMEVARELDALGEPTTELSRATLGGTMLGLLSRFASTFQSAVEGKGNFVTGREGXXXXXXXXGGETLELYGGARINYIFSEIFGKSLMGIDPFATLTDEEIRTAICNANGTRPALFVPEISFDLLVKRQISRLEQPGLQCVDLVFDELLRMAAQCETTELTRFPELRDRVVEVVNHMLRKCVGPTQVMISNLINIELAYINTSHPDFIGGSRAVAQLMERM 698
            L + A +ASLD SRGLGPG++  E  PS R+ KPP+AD +            XXXXXXXXXXXXXX          XXXXXXXXXXXXXX         HDRGMQQLIPIVNKLQDVFAAIGKHPLDLPQIVVIGSQSSGKSSVLEHIVGRDFLPRGTGIVTRRPLILQLYNTAFLRG GED+               WGEFLHRAGERFYDFMEIR+EIK+ETDRLTGKNKGISAKSINLK+YSP+VLNLTLVDLPGITKVSVGDQP DIE+QIR MCLAYI NPNSI+LAVTAANTDIANSDSLKLAREVDP+GLRTIGVLTKMDLMDPGTDAADVLLNRVIPLRIGYVAVVNRGQRDID+NLTIREALR+E+ FFKAHPVYRS+LKQCTTPTLTRMLNNILMHHIRDCLPEIKSRIQAMTM+V REL+ALGEPTTELSRATLGGTMLGLLSRFASTFQSAVEG+G+F  GREG        G ETLELYGGARINYIFSEIFGK+LMGIDPFATLTDEEIRTAICNANGTRPALFVPEISFDLLVKRQISRLEQPGLQCVDLVFDELLRMAAQCETTELTRFPELRDRVVEVVNHMLRKCVGPTQ+MISNLINIELAYINTSHPDFIGGSRAVAQLME+M
Sbjct:   21 LQSTAAVASLDLSRGLGPGAT--EAGPSPRLAKPPKADST--------SISNXXXXXXXXXXXXXXRFQPKQHSNMXXXXXXXXXXXXXXSAANVTSSLHDRGMQQLIPIVNKLQDVFAAIGKHPLDLPQIVVIGSQSSGKSSVLEHIVGRDFLPRGTGIVTRRPLILQLYNTAFLRGGGEDEXXXXXXXXXXXXXXXWGEFLHRAGERFYDFMEIRDEIKRETDRLTGKNKGISAKSINLKVYSPHVLNLTLVDLPGITKVSVGDQPADIESQIRAMCLAYIGNPNSIILAVTAANTDIANSDSLKLAREVDPDGLRTIGVLTKMDLMDPGTDAADVLLNRVIPLRIGYVAVVNRGQRDIDSNLTIREALRKEAGFFKAHPVYRSMLKQCTTPTLTRMLNNILMHHIRDCLPEIKSRIQAMTMDVGRELEALGEPTTELSRATLGGTMLGLLSRFASTFQSAVEGRGSFAAGREG----GGVGGAETLELYGGARINYIFSEIFGKALMGIDPFATLTDEEIRTAICNANGTRPALFVPEISFDLLVKRQISRLEQPGLQCVDLVFDELLRMAAQCETTELTRFPELRDRVVEVVNHMLRKCVGPTQMMISNLINIELAYINTSHPDFIGGSRAVAQLMEKM 649          
BLAST of NO18G01480 vs. NCBI_GenBank
Match: CCI11042.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 701.4 bits (1809), Expect = 3.000e-198
Identity = 357/539 (66.23%), Postives = 432/539 (80.15%), Query Frame = 0
Query:  159 MQQLIPIVNKLQDVFAAIGKHPLDLPQIVVIGSQSSGKSSVLEHIVGRDFLPRGTGIVTRRPLILQLYNTAFLRGAGEDDGGREGAHGGPEGKEWGEFLHRAGERFYDFMEIREEIKKETDRLTGKNKGISAKSINLKIYSPYVLNLTLVDLPGITKVSVGDQPVDIEAQIREMCLAYIANPNSIVLAVTAANTDIANSDSLKLAREVDPEGLRTIGVLTKMDLMDPGTDAADVLLNRVIPLRIGYVAVVNRGQRDIDNNLTIREALRRESSFFKAHPVYRSLLKQCTTPTLTRMLNNILMHHIRDCLPEIKSRIQAMTMEVARELDALGEPTTELSRATLGGTMLGLLSRFASTFQSAVEGKGNFVTGREGXXXXXXXXGGETLELYGGARINYIFSEIFGKSLMGIDPFATLTDEEIRTAICNANGTRPALFVPEISFDLLVKRQISRLEQPGLQCVDLVFDELLRMAAQCETTELTRFPELRDRVVEVVNHMLRKCVGPTQVMISNLINIELAYINTSHPDFIGGSRAVAQLMERM 698
            M QLIPIVNKLQDVF+AIG+ P++LPQIVVIGSQSSGKSSVLE+IVGRDFLPRG+GIVTRRPLILQLYN+       + +       GG    EWGEFLH  G++F DF EIR EI++ETDRLTGKNKGIS K+INLKIYSP+VLNLTLVDLPG+TKV VGDQP+DIE QIR+MC+ +I+NPNSI+LAVT+ANTD+ANSD+LKLARE+DP G RTIGVLTK+DLMD GTDA ++L  R+I LR G+V VVNR Q DI+NN++IR++L++E  FF+ H  YR++     T  L++ LN ILMHHIRDCLPEIKS+I +M  ++ +EL  +G PT  +S+  LGG +L L+S FA+ F ++++G+ N   G             E  ELYGGARI+YIF EIF K+L  +DPF TL+DE+IRT I NANG R +LFVPEISF+LL KRQI RLEQPGLQCVDL+FDEL R+A+QCET EL+RFPELRDRV+EVVN MLR C+GPTQ MI NLI+IELAYINT+HPDFIGGSRAVAQLME+M
Sbjct:    1 MDQLIPIVNKLQDVFSAIGQSPVNLPQIVVIGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLILQLYNS-------QSNLDETQLIGGESNVEWGEFLHIPGKKFKDFSEIRHEIERETDRLTGKNKGISNKTINLKIYSPHVLNLTLVDLPGVTKVPVGDQPIDIEEQIRDMCVEFISNPNSIILAVTSANTDLANSDALKLAREIDPAGDRTIGVLTKIDLMDEGTDALEMLQGRIISLRRGFVGVVNRSQADINNNVSIRDSLQKEQKFFQQHSAYRTVSSTMGTQYLSKTLNTILMHHIRDCLPEIKSKIGSMVTDLDQELTEMGSPTQSMSKTDLGGCLLHLISHFATNFSNSLDGRHNSPNGM------------EMQELYGGARIHYIFGEIFMKALRDVDPFDTLSDEDIRTTIRNANGPRQSLFVPEISFELLAKRQIKRLEQPGLQCVDLIFDELQRVASQCETMELSRFPELRDRVLEVVNKMLRTCLGPTQTMIQNLIHIELAYINTNHPDFIGGSRAVAQLMEKM 520          
BLAST of NO18G01480 vs. NCBI_GenBank
Match: CBJ26322.1 (Dnm1, dynamin-related GTPase involved in mitochondrial division [Ectocarpus siliculosus])

HSP 1 Score: 698.7 bits (1802), Expect = 1.900e-197
Identity = 372/622 (59.81%), Postives = 450/622 (72.35%), Query Frame = 0
Query:  159 MQQLIPIVNKLQDVFAAIGKHPLDLPQIVVIGSQSSGKSSVLEHIVGRDFLPRGTGIVTRRPLILQLYNTAFL----------------------------------------------RGAGEDDGGREGAHGG-------PEG-------------------------------KEWGEFLHRAGERFYDFMEIREEIKKETDRLTGKNKGISAKSINLKIYSPYVLNLTLVDLPGITKVSVGDQPVDIEAQIREMCLAYIANPNSIVLAVTAANTDIANSDSLKLAREVDPEGLRTIGVLTKMDLMDPGTDAADVLLNRVIPLRIGYVAVVNRGQRDIDNNLTIREALRRESSFFKAHPVYRSLLKQCTTPTLTRMLNNILMHHIRDCLPEIKSRIQAMTMEVARELDALGEPTTELSRATLGGTMLGLLSRFASTFQSAVEGKGNFVTGREGXXXXXXXXGGETLELYGGARINYIFSEIFGKSLMGIDPFATLTDEEIRTAICNANGTRPALFVPEISFDLLVKRQISRLEQPGLQCVDLVFDELLRMAAQCETTELTRFPELRDRVVEVVNHMLRKCVGPTQVMISNLINIELAYINTSHPDFIGGSRAVAQLMER 697
            M+ LIP+VNKLQDVF+AIG+ P+DLPQIVVIGSQSSGKSSVLE++VGRDFLPRGTGIVTRRPLILQLYNTA                                                 G+G   GGR  A GG       P G                               +EWGEFLH  G++F++F EIREEI +ETDRLTG NKGISAKSINL+IYSP+VLNLT+VDLPGITKV+ GDQP DIE QIR MCL YI NPN+I+L+VT+ANTD+ANSD+LK+AREVDP+G RT+GVLTK+DLMDPGTDA D+L NR+IPL+ G+V V+NRGQ+DID+ ++IR+AL++E+++F+ HP Y+ L K+  T  L++ LN ILMHHIRDCLPEIKS++  M   V++EL  LGEPT  +S A+L  T+L LLS+FAS F +AV+G+G+               G E  ELYGGARI+YIF EIF  SL  IDPF  LTD++IRTAI NANGTRP+LFVPE+SFDLLV++QI+RLEQPGLQC DLVFDE+ R+AAQCE TELTRFP LRDR+VEV + +LRKC+ PTQVMISNLI +ELAYINTSHPDFIGGSRA+A++MER
Sbjct:    3 MEDLIPVVNKLQDVFSAIGQTPIDLPQIVVIGSQSSGKSSVLENVVGRDFLPRGTGIVTRRPLILQLYNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKESGYTVTGRQDSGSGGLVGGRVAAFGGSSNGSVLPGGAPRTPSRTGRSGPXXXXXXXXXXXXXXXXXEREWGEFLHLPGQKFFNFAEIREEIIRETDRLTGNNKGISAKSINLRIYSPFVLNLTMVDLPGITKVATGDQPADIEEQIRGMCLQYIKNPNAIILSVTSANTDLANSDALKMAREVDPKGDRTVGVLTKIDLMDPGTDAGDMLDNRIIPLKRGFVGVINRGQKDIDDGVSIRQALQKEAAYFRDHPAYKGLDKRVGTTNLSKTLNQILMHHIRDCLPEIKSKLNVMMQSVSQELAELGEPTDCVSGASLTATLLTLLSKFASNFHAAVDGRGS------------SPDGIEMNELYGGARISYIFHEIFSHSLATIDPFEGLTDQDIRTAIYNANGTRPSLFVPEMSFDLLVRKQIARLEQPGLQCADLVFDEMQRIAAQCEGTELTRFPCLRDRIVEVNHQLLRKCMNPTQVMISNLIKLELAYINTSHPDFIGGSRAIAEVMER 612          
BLAST of NO18G01480 vs. NCBI_GenBank
Match: XP_009529892.1 (hypothetical protein PHYSODRAFT_560655 [Phytophthora sojae] >EGZ16143.1 hypothetical protein PHYSODRAFT_560655 [Phytophthora sojae])

HSP 1 Score: 697.6 bits (1799), Expect = 4.300e-197
Identity = 352/539 (65.31%), Postives = 432/539 (80.15%), Query Frame = 0
Query:  159 MQQLIPIVNKLQDVFAAIGKHPLDLPQIVVIGSQSSGKSSVLEHIVGRDFLPRGTGIVTRRPLILQLYNTAFLRGAGEDDGGREGAHGGPEGKEWGEFLHRAGERFYDFMEIREEIKKETDRLTGKNKGISAKSINLKIYSPYVLNLTLVDLPGITKVSVGDQPVDIEAQIREMCLAYIANPNSIVLAVTAANTDIANSDSLKLAREVDPEGLRTIGVLTKMDLMDPGTDAADVLLNRVIPLRIGYVAVVNRGQRDIDNNLTIREALRRESSFFKAHPVYRSLLKQCTTPTLTRMLNNILMHHIRDCLPEIKSRIQAMTMEVARELDALGEPTTELSRATLGGTMLGLLSRFASTFQSAVEGKGNFVTGREGXXXXXXXXGGETLELYGGARINYIFSEIFGKSLMGIDPFATLTDEEIRTAICNANGTRPALFVPEISFDLLVKRQISRLEQPGLQCVDLVFDELLRMAAQCETTELTRFPELRDRVVEVVNHMLRKCVGPTQVMISNLINIELAYINTSHPDFIGGSRAVAQLMERM 698
            M QLIPI+NKLQDVF+AIG+ P++LPQIVVIGSQSSGKSSVLE+IVG+DFLPRG+GIVTRRPL+LQLYN++       ++ G E A       EWGEFLH   ++F DF EIR EI+KETDR+TGKNKGIS KSINLK++SP+VLNLTLVDLPGITKV VGDQPV+IE QIR+MC  +I+NPNSI+LAVT+ANTD+ANSD+LK+ARE+DP+G RTIGVLTK+DLMD GTDA D+L  RVIPL+ GYV VVNR Q DI++ L+IR++L +E +FFK HP YR++  +  T  L++ LN ILMHHIRDCLP+IKS+I +M  ++ +EL  +G PT ++S   +GG +L LLS F+S F ++++G+ + +               E  ELYGGARINYIF+EIF KSL  ++PF  L+DE+IRT I NANG R +LFVPE+SF+LL KRQISRLEQPGLQCVDLVFDEL R+ +QCET ELTRFPELRDRV+EVVN MLR  + PTQ MI NLI IELAY+NT+HPDFIGGSRAVAQLME+M
Sbjct:    1 MDQLIPIINKLQDVFSAIGQSPINLPQIVVIGSQSSGKSSVLENIVGKDFLPRGSGIVTRRPLVLQLYNSSATVPVVAEEDGAEAA------DEWGEFLHLPDQKFTDFAEIRREIEKETDRITGKNKGISNKSINLKVFSPHVLNLTLVDLPGITKVPVGDQPVNIEEQIRDMCTEFISNPNSIILAVTSANTDLANSDALKMAREIDPDGQRTIGVLTKLDLMDDGTDAMDMLQGRVIPLKRGYVGVVNRSQADINSQLSIRDSLAKEQNFFKTHPAYRAIASRMGTQYLSKTLNTILMHHIRDCLPDIKSKISSMISDLDQELGEMGSPTEQMSPTEMGGCLLNLLSHFSSNFTNSLDGRNHQLV--------------EMDELYGGARINYIFNEIFSKSLREVNPFDGLSDEDIRTTIRNANGPRQSLFVPEVSFELLAKRQISRLEQPGLQCVDLVFDELQRVTSQCETIELTRFPELRDRVMEVVNGMLRASLVPTQAMIQNLIQIELAYVNTNHPDFIGGSRAVAQLMEKM 519          
BLAST of NO18G01480 vs. NCBI_GenBank
Match: ETP37688.1 (hypothetical protein F442_14526 [Phytophthora parasitica P10297])

HSP 1 Score: 697.6 bits (1799), Expect = 4.300e-197
Identity = 354/540 (65.56%), Postives = 433/540 (80.19%), Query Frame = 0
Query:  159 MQQLIPIVNKLQDVFAAIGKHPLDLPQIVVIGSQSSGKSSVLEHIVGRDFLPRGTGIVTRRPLILQLYN-TAFLRGAGEDDGGREGAHGGPEGKEWGEFLHRAGERFYDFMEIREEIKKETDRLTGKNKGISAKSINLKIYSPYVLNLTLVDLPGITKVSVGDQPVDIEAQIREMCLAYIANPNSIVLAVTAANTDIANSDSLKLAREVDPEGLRTIGVLTKMDLMDPGTDAADVLLNRVIPLRIGYVAVVNRGQRDIDNNLTIREALRRESSFFKAHPVYRSLLKQCTTPTLTRMLNNILMHHIRDCLPEIKSRIQAMTMEVARELDALGEPTTELSRATLGGTMLGLLSRFASTFQSAVEGKGNFVTGREGXXXXXXXXGGETLELYGGARINYIFSEIFGKSLMGIDPFATLTDEEIRTAICNANGTRPALFVPEISFDLLVKRQISRLEQPGLQCVDLVFDELLRMAAQCETTELTRFPELRDRVVEVVNHMLRKCVGPTQVMISNLINIELAYINTSHPDFIGGSRAVAQLMERM 698
            M+QLIPI+NKLQDVF+AIG+ P++LPQIVVIGSQSSGKSSVLE+IVG+DFLPRG+GIVTRRPL+LQLYN +A +   G D+            +EWGEFLH  G++F DF EIR EI+KETDR+TGKNKGIS KSINLK+YSP+VLNLTLVDLPGITKV VGDQPV+IE QIR+MC  +I+NPNSI+LAVT+ANTD+ANSD+LK+ARE+DP G RTIGVLTK+DLMD GTDA D+L  RVIPL+ GYV VVNR Q DI++ L+IR++L +E +FFK HP YR++  +  T  L++ LN ILMHHIRDCLPEIKS+I +M  ++ +EL  +G PT +++   +GG +L LLS F+S F ++++G+ + +               E  ELYGGARINYIF+EIF KSL  ++PF  L+DE+IRT I NANG R +LFVPE+SF+LL KRQISRLEQPGLQCVDLVFDEL R+ +QCET ELTRFPELRDRV+EVVN MLR  + PTQ MI NLI IELAY+NT+HPDFIGGSRAVAQLME+M
Sbjct:    1 MEQLIPIINKLQDVFSAIGQSPINLPQIVVIGSQSSGKSSVLENIVGKDFLPRGSGIVTRRPLVLQLYNSSATIPVEGADE----------TVEEWGEFLHLPGQKFTDFNEIRREIEKETDRMTGKNKGISNKSINLKVYSPHVLNLTLVDLPGITKVPVGDQPVNIEEQIRDMCTEFISNPNSIILAVTSANTDLANSDALKMAREIDPNGERTIGVLTKLDLMDDGTDAMDMLQGRVIPLKKGYVGVVNRSQADINSQLSIRDSLAKEQNFFKTHPAYRAIASRMGTQYLSKTLNTILMHHIRDCLPEIKSKISSMISDLDQELGEMGSPTEQMTPTEMGGCLLNLLSHFSSNFTNSLDGRNHQLV--------------EMYELYGGARINYIFNEIFSKSLREVNPFDGLSDEDIRTTIRNANGPRQSLFVPEVSFELLAKRQISRLEQPGLQCVDLVFDELQRVTSQCETIELTRFPELRDRVMEVVNGMLRASLVPTQAMIQNLIQIELAYVNTNHPDFIGGSRAVAQLMEKM 516          
BLAST of NO18G01480 vs. NCBI_GenBank
Match: XP_008910420.1 (hypothetical protein PPTG_15137 [Phytophthora parasitica INRA-310] >ETI39730.1 hypothetical protein F443_14709 [Phytophthora parasitica P1569] >ETK79845.1 hypothetical protein L915_14329 [Phytophthora parasitica] >ETL33264.1 hypothetical protein L916_14234 [Phytophthora parasitica] >ETL86551.1 hypothetical protein L917_14025 [Phytophthora parasitica] >ETN04493.1 hypothetical protein PPTG_15137 [Phytophthora parasitica INRA-310] >ETO68459.1 hypothetical protein F444_14714 [Phytophthora parasitica P1976] >ETP09590.1 hypothetical protein F441_14568 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 696.4 bits (1796), Expect = 9.600e-197
Identity = 354/540 (65.56%), Postives = 433/540 (80.19%), Query Frame = 0
Query:  159 MQQLIPIVNKLQDVFAAIGKHPLDLPQIVVIGSQSSGKSSVLEHIVGRDFLPRGTGIVTRRPLILQLYN-TAFLRGAGEDDGGREGAHGGPEGKEWGEFLHRAGERFYDFMEIREEIKKETDRLTGKNKGISAKSINLKIYSPYVLNLTLVDLPGITKVSVGDQPVDIEAQIREMCLAYIANPNSIVLAVTAANTDIANSDSLKLAREVDPEGLRTIGVLTKMDLMDPGTDAADVLLNRVIPLRIGYVAVVNRGQRDIDNNLTIREALRRESSFFKAHPVYRSLLKQCTTPTLTRMLNNILMHHIRDCLPEIKSRIQAMTMEVARELDALGEPTTELSRATLGGTMLGLLSRFASTFQSAVEGKGNFVTGREGXXXXXXXXGGETLELYGGARINYIFSEIFGKSLMGIDPFATLTDEEIRTAICNANGTRPALFVPEISFDLLVKRQISRLEQPGLQCVDLVFDELLRMAAQCETTELTRFPELRDRVVEVVNHMLRKCVGPTQVMISNLINIELAYINTSHPDFIGGSRAVAQLMERM 698
            M+QLIPI+NKLQDVF+AIG+ P++LPQIVVIGSQSSGKSSVLE+IVG+DFLPRG+GIVTRRPL+LQLYN +A +   G D+            +EWGEFLH  G++F DF EIR EI+KETDR+TGKNKGIS KSINLK+YSP+VLNLTLVDLPGITKV VGDQPV+IE QIR+MC  +I+NPNSI+LAVT+ANTD+ANSD+LK+ARE+DP G RTIGVLTK+DLMD GTDA D+L  RVIPL+ GYV VVNR Q DI++ L+IR++L +E +FFK HP YR++  +  T  L++ LN ILMHHIRDCLPEIKS+I +M  ++ +EL  +G PT +++   +GG +L LLS F+S F ++++G+ + +               E  ELYGGARINYIF+EIF KSL  ++PF  L+DE+IRT I NANG R +LFVPE+SF+LL KRQISRLEQPGLQCVDLVFDEL R+ +QCET ELTRFPELRDRV+EVVN MLR  + PTQ MI NLI IELAY+NT+HPDFIGGSRAVAQLME+M
Sbjct:    1 MEQLIPIINKLQDVFSAIGQSPINLPQIVVIGSQSSGKSSVLENIVGKDFLPRGSGIVTRRPLVLQLYNSSATIPVEGADE----------TVEEWGEFLHLPGQKFTDFNEIRREIEKETDRMTGKNKGISNKSINLKVYSPHVLNLTLVDLPGITKVPVGDQPVNIEEQIRDMCTEFISNPNSIILAVTSANTDLANSDALKMAREIDPNGERTIGVLTKLDLMDDGTDAMDMLQGRVIPLKKGYVGVVNRSQADINSQLSIRDSLAKEQNFFKTHPAYRAIASRMGTQYLSKTLNTILMHHIRDCLPEIKSKISSMISDLDQELGEMGSPTEQMTPTEMGGCLLNLLSHFSSNFTNSLDGRNHQLV--------------EMDELYGGARINYIFNEIFSKSLREVNPFDGLSDEDIRTTIRNANGPRQSLFVPEVSFELLAKRQISRLEQPGLQCVDLVFDELQRVTSQCETIELTRFPELRDRVMEVVNGMLRASLVPTQAMIQNLIQIELAYVNTNHPDFIGGSRAVAQLMEKM 516          
BLAST of NO18G01480 vs. NCBI_GenBank
Match: ETM39716.1 (hypothetical protein L914_14151 [Phytophthora parasitica] >KUF80179.1 Dynamin-1 protein [Phytophthora nicotianae] >KUF85120.1 Dynamin-1 protein [Phytophthora nicotianae] >KUF95365.1 hypothetical protein AM588_10010004 [Phytophthora nicotianae])

HSP 1 Score: 696.4 bits (1796), Expect = 9.600e-197
Identity = 354/540 (65.56%), Postives = 433/540 (80.19%), Query Frame = 0
Query:  159 MQQLIPIVNKLQDVFAAIGKHPLDLPQIVVIGSQSSGKSSVLEHIVGRDFLPRGTGIVTRRPLILQLYN-TAFLRGAGEDDGGREGAHGGPEGKEWGEFLHRAGERFYDFMEIREEIKKETDRLTGKNKGISAKSINLKIYSPYVLNLTLVDLPGITKVSVGDQPVDIEAQIREMCLAYIANPNSIVLAVTAANTDIANSDSLKLAREVDPEGLRTIGVLTKMDLMDPGTDAADVLLNRVIPLRIGYVAVVNRGQRDIDNNLTIREALRRESSFFKAHPVYRSLLKQCTTPTLTRMLNNILMHHIRDCLPEIKSRIQAMTMEVARELDALGEPTTELSRATLGGTMLGLLSRFASTFQSAVEGKGNFVTGREGXXXXXXXXGGETLELYGGARINYIFSEIFGKSLMGIDPFATLTDEEIRTAICNANGTRPALFVPEISFDLLVKRQISRLEQPGLQCVDLVFDELLRMAAQCETTELTRFPELRDRVVEVVNHMLRKCVGPTQVMISNLINIELAYINTSHPDFIGGSRAVAQLMERM 698
            M+QLIPI+NKLQDVF+AIG+ P++LPQIVVIGSQSSGKSSVLE+IVG+DFLPRG+GIVTRRPL+LQLYN +A +   G D+            +EWGEFLH  G++F DF EIR EI+KETDR+TGKNKGIS KSINLK+YSP+VLNLTLVDLPGITKV VGDQPV+IE QIR+MC  +I+NPNSI+LAVT+ANTD+ANSD+LK+ARE+DP G RTIGVLTK+DLMD GTDA D+L  RVIPL+ GYV VVNR Q DI++ L+IR++L +E +FFK HP YR++  +  T  L++ LN ILMHHIRDCLPEIKS+I +M  ++ +EL  +G PT +++   +GG +L LLS F+S F ++++G+ + +               E  ELYGGARINYIF+EIF KSL  ++PF  L+DE+IRT I NANG R +LFVPE+SF+LL KRQISRLEQPGLQCVDLVFDEL R+ +QCET ELTRFPELRDRV+EVVN MLR  + PTQ MI NLI IELAY+NT+HPDFIGGSRAVAQLME+M
Sbjct:    1 MEQLIPIINKLQDVFSAIGQSPINLPQIVVIGSQSSGKSSVLENIVGKDFLPRGSGIVTRRPLVLQLYNSSATIPVEGADE----------TVEEWGEFLHLPGQKFTDFNEIRREIEKETDRMTGKNKGISNKSINLKVYSPHVLNLTLVDLPGITKVPVGDQPVNIEEQIRDMCTEFISNPNSIILAVTSANTDLANSDALKMAREIDPNGERTIGVLTKLDLMDDGTDAMDMLQGRVIPLKKGYVGVVNRSQADINSQLSIRDSLAKEQNFFKTHPAYRAIASRMGTQYLSKTLNTILMHHIRDCLPEIKSKISSMISDLDQELGEMGSPTEQMTPTEMGGCLLNLLSHFSSNFTNSLDGRNHQLV--------------EMDELYGGARINYIFNEIFSKSLREVNPFDGLSDEDIRTTIRNANGPRQSLFVPEVSFELLAKRQISRLEQPGLQCVDLVFDELQRVTSQCETIELTRFPELRDRVMEVVNGMLRASLVPTQAMIQNLIQIELAYVNTNHPDFIGGSRAVAQLMEKM 516          
BLAST of NO18G01480 vs. NCBI_GenBank
Match: XP_002908808.1 (dynamin-2 [Phytophthora infestans T30-4] >EEY57622.1 dynamin-2 [Phytophthora infestans T30-4])

HSP 1 Score: 695.7 bits (1794), Expect = 1.600e-196
Identity = 354/539 (65.68%), Postives = 432/539 (80.15%), Query Frame = 0
Query:  159 MQQLIPIVNKLQDVFAAIGKHPLDLPQIVVIGSQSSGKSSVLEHIVGRDFLPRGTGIVTRRPLILQLYNTAFLRGAGEDDGGREGAHGGPEGKEWGEFLHRAGERFYDFMEIREEIKKETDRLTGKNKGISAKSINLKIYSPYVLNLTLVDLPGITKVSVGDQPVDIEAQIREMCLAYIANPNSIVLAVTAANTDIANSDSLKLAREVDPEGLRTIGVLTKMDLMDPGTDAADVLLNRVIPLRIGYVAVVNRGQRDIDNNLTIREALRRESSFFKAHPVYRSLLKQCTTPTLTRMLNNILMHHIRDCLPEIKSRIQAMTMEVARELDALGEPTTELSRATLGGTMLGLLSRFASTFQSAVEGKGNFVTGREGXXXXXXXXGGETLELYGGARINYIFSEIFGKSLMGIDPFATLTDEEIRTAICNANGTRPALFVPEISFDLLVKRQISRLEQPGLQCVDLVFDELLRMAAQCETTELTRFPELRDRVVEVVNHMLRKCVGPTQVMISNLINIELAYINTSHPDFIGGSRAVAQLMERM 698
            M QLIPI+NKLQDVF+AIG+ P++LPQIVVIGSQSSGKSSVLE+IVG+DFLPRG+GIVTRRPL+LQLYN++        +G  E A      +EWGEFLH  G++F DF EIR EI+KETDR+TGKNKGIS KSINLK++SPYVLNLTLVDLPGITKV VGDQPV+IE QIR+MC  +I+NPNSI+LAVT+ANTD+ANSD+LK+ARE+DP G RTIGVLTK+DLMD GTDA D+L  RVIPL+ GYV VVNR Q DI++ L+IR++L +E +FFK HP YR++  +  T  L++ LN ILMHHIRDCLPEIKS+I +M  ++ +EL  +G PT +++   +GG +L LLS F+S F ++++G+ + +               E  ELYGGARINYIF+EIF KSL  ++PF  L+DE+IRT I NANG R +LFVPE+SF+LL KRQISRLEQPGLQCVDLVFDEL R+ +QCET ELTRFPELRDRV+EVVN MLR  + PTQ MI NLI IELAY+NT+HPDFIGGSRAVAQLME+M
Sbjct:    1 MDQLIPIINKLQDVFSAIGQSPINLPQIVVIGSQSSGKSSVLENIVGKDFLPRGSGIVTRRPLVLQLYNSS---ATIPVEGAEETA------EEWGEFLHVPGQKFTDFNEIRREIEKETDRITGKNKGISNKSINLKVFSPYVLNLTLVDLPGITKVPVGDQPVNIEEQIRDMCTEFISNPNSIILAVTSANTDLANSDALKMAREIDPNGERTIGVLTKLDLMDDGTDAMDMLQGRVIPLKRGYVGVVNRSQADINSQLSIRDSLAKEQNFFKTHPAYRAIASRMGTQYLSKTLNTILMHHIRDCLPEIKSKISSMISDLDQELGEMGSPTEQMTATEMGGCLLSLLSHFSSNFTNSLDGRNHQLV--------------EMDELYGGARINYIFNEIFSKSLREVNPFDGLSDEDIRTTIRNANGPRQSLFVPEVSFELLAKRQISRLEQPGLQCVDLVFDELQRVTSQCETIELTRFPELRDRVMEVVNGMLRASLIPTQAMIQNLIQIELAYVNTNHPDFIGGSRAVAQLMEKM 516          
BLAST of NO18G01480 vs. NCBI_GenBank
Match: XP_024576875.1 (dynamin like protein [Plasmopara halstedii] >CEG40506.1 dynamin like protein [Plasmopara halstedii])

HSP 1 Score: 693.3 bits (1788), Expect = 8.200e-196
Identity = 350/539 (64.94%), Postives = 428/539 (79.41%), Query Frame = 0
Query:  159 MQQLIPIVNKLQDVFAAIGKHPLDLPQIVVIGSQSSGKSSVLEHIVGRDFLPRGTGIVTRRPLILQLYNTAFLRGAGEDDGGREGAHGGPEGKEWGEFLHRAGERFYDFMEIREEIKKETDRLTGKNKGISAKSINLKIYSPYVLNLTLVDLPGITKVSVGDQPVDIEAQIREMCLAYIANPNSIVLAVTAANTDIANSDSLKLAREVDPEGLRTIGVLTKMDLMDPGTDAADVLLNRVIPLRIGYVAVVNRGQRDIDNNLTIREALRRESSFFKAHPVYRSLLKQCTTPTLTRMLNNILMHHIRDCLPEIKSRIQAMTMEVARELDALGEPTTELSRATLGGTMLGLLSRFASTFQSAVEGKGNFVTGREGXXXXXXXXGGETLELYGGARINYIFSEIFGKSLMGIDPFATLTDEEIRTAICNANGTRPALFVPEISFDLLVKRQISRLEQPGLQCVDLVFDELLRMAAQCETTELTRFPELRDRVVEVVNHMLRKCVGPTQVMISNLINIELAYINTSHPDFIGGSRAVAQLMERM 698
            M QLIPI+NKLQDVF+AIG+ P++LPQIVVIGSQSSGKSSVLE+IVG+DFLPRG+GIVTRRPL+LQLYN                  GG   +EWGEFLH  G++F DF EIR EI+KETDR+TGKNKGIS K+INLKI+SP+VLNLTLVDLPGITKV VGDQPV+IE QIR+MC  +I+NPNSI+LAVT+ANTD+ANSD+LK+ARE+DP+G RTIGVLTK+DLMD GTDA D+L  RVIPL+ GYV VVNR Q DI++ ++IR++L +E +FFK HP YR++  +  T  L++ LN ILMHHIRDCLPEIKS+I +M  ++ +EL  +G PT +++   +GG +L LLS F+S F ++++G+ + +               E  ELYGGARINYIF+EIF KSL  ++PF  L+DE+IR  I NANG R +LFVPE+SF+LL KRQISRLEQPGLQCVDLVFDEL R+ +QCET ELTRFPELRDRV+EVVN MLR  + PTQ MI NLI IELAY+NT+HPDFIGGSRAVAQLME+M
Sbjct:    1 MDQLIPIINKLQDVFSAIGQSPINLPQIVVIGSQSSGKSSVLENIVGKDFLPRGSGIVTRRPLVLQLYNIP----------STSSVEGGDAAEEWGEFLHMPGQKFTDFNEIRREIEKETDRITGKNKGISNKTINLKIFSPHVLNLTLVDLPGITKVPVGDQPVNIEEQIRDMCTEFISNPNSIILAVTSANTDLANSDALKMAREIDPDGQRTIGVLTKLDLMDDGTDALDMLQGRVIPLKKGYVGVVNRSQADINSQVSIRDSLSKEQNFFKNHPAYRAISSRMGTQYLSKTLNTILMHHIRDCLPEIKSKISSMISDLDQELGEMGSPTVQMTSTEMGGCLLNLLSHFSSNFTNSLDGRNHQLV--------------EMDELYGGARINYIFNEIFSKSLREVNPFDGLSDEDIRITIRNANGPRQSLFVPEVSFELLAKRQISRLEQPGLQCVDLVFDELQRVTSQCETIELTRFPELRDRVMEVVNGMLRASLIPTQAMIQNLIRIELAYVNTNHPDFIGGSRAVAQLMEKM 515          
BLAST of NO18G01480 vs. NCBI_GenBank
Match: CCA17876.1 (dynamin GTPase putative [Albugo laibachii Nc14])

HSP 1 Score: 693.0 bits (1787), Expect = 1.100e-195
Identity = 356/539 (66.05%), Postives = 430/539 (79.78%), Query Frame = 0
Query:  159 MQQLIPIVNKLQDVFAAIGKHPLDLPQIVVIGSQSSGKSSVLEHIVGRDFLPRGTGIVTRRPLILQLYNTAFLRGAGEDDGGREGAHGGPEGKEWGEFLHRAGERFYDFMEIREEIKKETDRLTGKNKGISAKSINLKIYSPYVLNLTLVDLPGITKVSVGDQPVDIEAQIREMCLAYIANPNSIVLAVTAANTDIANSDSLKLAREVDPEGLRTIGVLTKMDLMDPGTDAADVLLNRVIPLRIGYVAVVNRGQRDIDNNLTIREALRRESSFFKAHPVYRSLLKQCTTPTLTRMLNNILMHHIRDCLPEIKSRIQAMTMEVARELDALGEPTTELSRATLGGTMLGLLSRFASTFQSAVEGKGNFVTGREGXXXXXXXXGGETLELYGGARINYIFSEIFGKSLMGIDPFATLTDEEIRTAICNANGTRPALFVPEISFDLLVKRQISRLEQPGLQCVDLVFDELLRMAAQCETTELTRFPELRDRVVEVVNHMLRKCVGPTQVMISNLINIELAYINTSHPDFIGGSRAVAQLMERM 698
            M QLIPIVNKLQDVF+AIG+ P++LPQIVVIGSQSSGKSSVLE+IVGRDFLPRG+GIVTRRPLILQLYN+       E    R     G    EWGEFLH  G++F DF EIR EI++ETDRLTGKNKGIS K+INLKI+SPYVLNLTLVDLPG+TKV VGDQPV+IE QIR+MC+ +I+NPNSI+LAVT+ANTD+ANSD+LKLARE+DP G RTIGVLTK+DLMD GTDA ++L  RVI LR G+V VVNR Q DI+NN++IR++L++E  FF+ H  YR++  +  T  L++ LN ILMHHIRDCLPEIKS+I +M  ++ +EL  +G PT  +S+  LGG +L L+S F++ F ++++G+ N               G E  ELYGGARI+YIF EIF K+L  +DPF TL+DE+IRT I NANG R +LFVPE+SF+LL KRQI RLEQPG+QCVDL+FDEL R+A+QCET EL+RFPELRDRV+EVVN MLR CVGPTQ  I NLI IELAYINT+HPDFIGGSRAVAQLME+M
Sbjct:    1 MDQLIPIVNKLQDVFSAIGQSPVNLPQIVVIGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLILQLYNSQSNSTLDESQPLR-----GENDVEWGEFLHIPGKKFTDFSEIRREIERETDRLTGKNKGISNKTINLKIFSPYVLNLTLVDLPGVTKVPVGDQPVNIEEQIRDMCVEFISNPNSIILAVTSANTDLANSDALKLAREIDPAGDRTIGVLTKIDLMDEGTDALEMLQGRVISLRRGFVGVVNRSQADINNNVSIRDSLQKEHLFFQNHTAYRTVSSKMGTQYLSKTLNTILMHHIRDCLPEIKSKIGSMVADLDQELAEMGSPTQSMSKTDLGGCLLHLISHFSTNFSNSLDGRHN------------SPNGIELHELYGGARIHYIFGEIFIKALREVDPFDTLSDEDIRTTIRNANGPRQSLFVPEVSFELLAKRQIKRLEQPGIQCVDLIFDELQRVASQCETMELSRFPELRDRVLEVVNKMLRACVGPTQTTIQNLIQIELAYINTNHPDFIGGSRAVAQLMEKM 522          
The following BLAST results are available for this feature:
BLAST of NO18G01480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23355.11.800e-28084.45dynamin like protein [Nannochloropsis gaditana][more]
CCI11042.13.000e-19866.23unnamed protein product [Albugo candida][more]
CBJ26322.11.900e-19759.81Dnm1, dynamin-related GTPase involved in mitochond... [more]
XP_009529892.14.300e-19765.31hypothetical protein PHYSODRAFT_560655 [Phytophtho... [more]
ETP37688.14.300e-19765.56hypothetical protein F442_14526 [Phytophthora para... [more]
XP_008910420.19.600e-19765.56hypothetical protein PPTG_15137 [Phytophthora para... [more]
ETM39716.19.600e-19765.56hypothetical protein L914_14151 [Phytophthora para... [more]
XP_002908808.11.600e-19665.68dynamin-2 [Phytophthora infestans T30-4] >EEY57622... [more]
XP_024576875.18.200e-19664.94dynamin like protein [Plasmopara halstedii] >CEG40... [more]
CCA17876.11.100e-19566.05dynamin GTPase putative [Albugo laibachii Nc14][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR060ncniR060Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004004NSK004004Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G01480.1NO18G01480.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|547218gene_9078Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100057g19gene7095Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G01480.1NO18G01480.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G01480 ID=NO18G01480|Name=NO18G01480|organism=Nannochloropsis oceanica|type=gene|length=4277bp
ATGTGCGGCAAGTCGGTTGTGCGCCCTTCTCATCATAGGGTCACCATCGC
TGAGCGACGATGGCGCCTTGCTTCTTCTGCCCCTTGGCCCAGTGTCCCTA
ATTTATTCCAACAATGGCGCCATGCTTTGAGgtcctcgaacacttacatt
gctcatggcggatttgtcaagcctgatggccatacatacgcctcgctcag
cttcttcctgttccccggtttccctccctcaccacgccccttagggacat
catttctgctgcttacaataaaaagtgccaccacgcataaacagGCGCAG
CACCAAACACCAACATATAGTAAAGCATTTACCAGCAGCAGCAGTCCTGG
CTTCGCTAGATTCCAGCCGTGGACTCGGACgtaagtgagtagaaaaaatt
cacgttccctgtccctttgcgctttccctacgttcggtcactcatcctcc
cacgcgagcgcagggctctttgaacaggtctacgggcatgatgtccgtgg
gttgttagattggcctaaaaaaatgcatttctgtttgcctttttgcctcc
caaagcgagcacttgttaccgtaccctgtactgccgccagacgcttcaca
tgcaacatgattgcaagcgcttatttcatcctcattgacatttgaccgcg
ttttcatgcacgaggaatgaggccttaggatttgactctcgaattgtcag
acgcagatcacacgtggtaccctgcaatatgcaatcaacgtattcttgca
catttaatcaacatccgctcctcacttctctatgacaaccaccaacccct
acagCCGGTAGCAGCAACCCCGAACTACCCCCTTCCTTGCGCGTCCCCAA
GCCACCCAGAGCCGACCTCAGCAGCAACAGCAACAGCAGTAACGGAAGCA
GCAGCAGCAGCAGTAGTAGCAACAAGCGTTTTCAACCCACGCAACACCAC
AGTCATACACACATGGCTGCCGGAGGGGCCGCCACGCCTCCTTCCTCCTC
CTCTTCAACCTCAACCTCCTCCTCATCTTCCTCTTCCTCTTCCTTGTTGC
ACGACCGAGGGATGCAGCAACTCATCCCGATTGTCAATAAGTTGCAAGAC
GTCTTCGCGGCCATCGGGAAGCATCCCCTGGACTTGCCCCAAATCGTGGT
GATCGGCAGCCAGTCCTCGGGAAAGAGCTCCGTGCTGGAGCATATCGgta
aaaagagggggagggaaggaaggaaaagaggggaggatggtagaagaggg
agggagggaagcatggcttcgacaaatttcattgagacgtcgaccgcaga
attattcatccttctcttctttccctcccttcctccctccccccccagTC
GGTCGTGACTTCTTGCCACGCGGCACAGGCATTGTTACCCGCCGACCTCT
CATCCTCCAGCTCTACAATACGGCCTTCCTTCGCGGCGCCGGGGAGGACG
ACGGCGGAAGGGAGGGCGCGCATGGCGGGCCGGAGGGGAAGGAATGGGGG
GAGTTTCTGCATCGGGCTGGAGAGAGGTTTTATGACTTCATGGAGATTCG
GGAGGAGATCAAGAAGGAGACGGATCGATTGACGGGAAAGAATAAGGGGA
TCAGTGCCAAGAGCATCAATCTCAAGATTTACTCGCCCTACGTCCTGAAC
CTGACCCTAGTAGACTTGCCGGGCATCACCAAGgtaagggagggagggag
gtagggagtgaaggagggggagagtgggaagcacatgacgcttcctcacc
aagtcataggggagaatatgggcgggaagaggggagggaggtctcactga
cgtctcgctcacgagtcattcatgtatgccacgccgcgtccactccagGT
GTCCGTTGGGGACCAGCCGGTGGATATCGAGgtgaggagagcgggaggga
gggcacgagggcggagggaggatgtcaagaggtgattcaacaagcaattt
attcgtttactcttgtctttctcgcacctatatgacctatctcccctgcc
caccgaccagGCCCAAATCCGGGAGATGTGCCTGGCGTACATCGCTAACC
CCAACTCGATCGTCTTGGCAGTCACGGCGGCCAACACAGgtactgtcttg
aagacgagggcacttctttcggtgcgcgtgacgtggcctgttttcatgaa
aacgtacgtgccatcaaaacatgcgtggccactcctctcacaaagcaagc
cctccctccctccccctcctcccttctccctgctaaagACATCGCGAACT
CAGACTCGCTGAAGCTTGCGCGGGAAGTGGACCCCGAGGGGCTGCGGACG
ATCGGCGTCTTGACTAAGATGGACTTGATGGACCCAGgtagatgcgagtg
gtgctccccgggtcttaagtgtgtcctgcttttctcagaaagcaatgtgt
aattgtttgattctttgttcatttaggaagaggattctcacgcctcggga
aacccaaccaccccctttccacccctctagGCACAGACGCCGCCGACGTG
CTGCTGAATCGTGTCATTCCCCTCCGGATCGGCTACGTAGCAGTGGTGAA
CCGCGGCCAGCGCGACATAGACAACAACCTGACTATCCGCGAGGCCCTGC
GGAGGGAATCGAGTTTTTTCAAGGCCCATCCCGTATATCGGTCGCTGCTG
AAGCAGTGCACCACCCCCACCTTGACGCGCATGCTCAACAACATTCTCAT
GCACCACATCCGgtgaggaagagggagggagcgagggagggtgggaggga
gggagttagttgtaaagaaaggcatccaactaccttcgaatttcactgct
cacctcaccctccctcctttcctccctcccttcccctcctagCGACTGCC
TCCCTGAGATCAAATCCCGCATCCAAGCGATGACCATGGAGGTGGCCCGC
GAGCTGGACGCCCTCGGCGAGCCCACGACTGAGCTCTCGCGGGCCACGCT
GGGGGGCACCATGCTGGGGCTCTTGTCGCGCTTTGCCTCCACCTTCCAAA
GCGCAGTGGAGGGGAAGGGGAATTTCGTGACTGGACGGGAGGGAGGGCGG
GAGGGAGGGATTGTGGGGGGTGGTGAGACGTTGGAGTTGTATGGAGGGGC
GAGGATTAATTACATTTTTAGTGAGATATTCGGGAAGTCCTTGATGGGCA
TTGACCCGTTCGCGACCCTGACGGACGAGGAGATACGGACGGCAATCTGC
AACGCCAATGGGACGCGGCCGGCGTTGTTCGTGCCGGAGATCAGCTTCGA
TCTGCTGGTGAAAAGACAGATTTCGCGGTTGGAGCAGgtagggaaggggg
cgcgggagaggggaggagggggaagtgccactgacctattgccatgtact
gctgtacatcgaactgggtgcccagccctcacccttatcctccctccttc
tgtccttccgtccttcccaccccctcacttcctcactagcctggcctagc
acgcctggacatggcctttagtggtcgatgagcccctgcgggcacccgac
cagtgccagaactgactctcaccttcctttccttattcccatatccctcc
atatcccccccccagCCCGGCCTCCAATGCGTGGACTTGGTCTTCGACGA
GTTGCTGCGTATGGCCGCTCAGTGCGAGACGACGGAGCTGACGCGCTTCC
CCGAGCTGAGGGACCGGGTGGTGGAGGTGGTGAACCACATGCTCCGCAAG
TGCGTGGGGCCCACCCAGgtgagaggaataggagggagagaggaagggag
ggggggggggaagaagtgcagaatgcttctggggtcagaacaaacagatc
cactttttgagagtgcagatgagtcttacttagatttagctccttcgcac
ttgctctctttcaggtggacgatggtctggtctcgagccggatcagcatc
gagctggctgcacgaaaccctgccgttctgaccctcctaactcaccggcc
tctacccccctctcttcccccggtcagGTGATGATCTCAAATCTGATCAA
CATCGAGCTAGCGTACATCAACACCTCCCACCCCGACTTCATTGGGGGCT
CCCGGGCTGTGGCTCAGCTCATGGAGAGAATGGCCCAAGAAAAGGGGAAT
GCGGGGGGAAGAGAGGGAGGGAGGGAGGGAGGAAGGGGTGGGGAGGAGAG
GGGGAGCCCTGTGAGGGGGGATGTGGGAGGGGGAAGAAAGAAGGATACCG
GGGTGGTAGGGGGGGGGCGGGAGGAGGGGCAATGGGAGGTCGAGGGGTGG
GGCTGGGGATGGAGGATGGAGGGATGA
back to top

protein sequence of NO18G01480.1

>NO18G01480.1-protein ID=NO18G01480.1-protein|Name=NO18G01480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=762bp
MCGKSVVRPSHHRVTIAERRWRLASSAPWPSVPNLFQQWRHALRRSTKHQ
HIVKHLPAAAVLASLDSSRGLGPGSSNPELPPSLRVPKPPRADLSSNSNS
SNGSSSSSSSSNKRFQPTQHHSHTHMAAGGAATPPSSSSSTSTSSSSSSS
SSLLHDRGMQQLIPIVNKLQDVFAAIGKHPLDLPQIVVIGSQSSGKSSVL
EHIVGRDFLPRGTGIVTRRPLILQLYNTAFLRGAGEDDGGREGAHGGPEG
KEWGEFLHRAGERFYDFMEIREEIKKETDRLTGKNKGISAKSINLKIYSP
YVLNLTLVDLPGITKVSVGDQPVDIEAQIREMCLAYIANPNSIVLAVTAA
NTDIANSDSLKLAREVDPEGLRTIGVLTKMDLMDPGTDAADVLLNRVIPL
RIGYVAVVNRGQRDIDNNLTIREALRRESSFFKAHPVYRSLLKQCTTPTL
TRMLNNILMHHIRDCLPEIKSRIQAMTMEVARELDALGEPTTELSRATLG
GTMLGLLSRFASTFQSAVEGKGNFVTGREGGREGGIVGGGETLELYGGAR
INYIFSEIFGKSLMGIDPFATLTDEEIRTAICNANGTRPALFVPEISFDL
LVKRQISRLEQPGLQCVDLVFDELLRMAAQCETTELTRFPELRDRVVEVV
NHMLRKCVGPTQVMISNLINIELAYINTSHPDFIGGSRAVAQLMERMAQE
KGNAGGREGGREGGRGGEERGSPVRGDVGGGRKKDTGVVGGGREEGQWEV
EGWGWGWRMEG*
back to top
Synonyms
Publications