NO18G01440, NO18G01440 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G01440 vs. NCBI_GenBank
Match: EWM23369.1 (protein tyrosine phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 291.6 bits (745), Expect = 1.700e-75 Identity = 138/166 (83.13%), Postives = 149/166 (89.76%), Query Frame = 0 Query: 8 ASITKSVLFVCLGNICRSPSAEAVFKSMVAKKSLASQFHIDSCGTGGGNPGWYQEGGWSYHEGDRADSRMRAAASKRGIDITSLSRALTAEDVDKFDLLVCMDGANKSAVMEAADYWGKTSVAASKIRLMTEYCTINKGARMVPDPYYGGADGFDKVLDLLEDACE 174 AS KSVLFVCLGNICRSP+AEAVFKS+V ++ +S HIDSCGTGGGNPGWYQ+GGWSYHEGD ADSRMRAAASKRGIDITS SR L AED+D FD L+CMDGANKSAVMEAADYWGKT AA KIRLMTEYCTINKGAR VPDPYYGGADGF+KVLDLL+DAC+ Sbjct: 64 ASAAKSVLFVCLGNICRSPTAEAVFKSVVEREGKSSHIHIDSCGTGGGNPGWYQKGGWSYHEGDMADSRMRAAASKRGIDITSRSRPLKAEDIDFFDFLICMDGANKSAVMEAADYWGKTQTAAKKIRLMTEYCTINKGARTVPDPYYGGADGFEKVLDLLQDACD 229
BLAST of NO18G01440 vs. NCBI_GenBank
Match: CBN74838.1 (Protein tyrosine phosphatase [Ectocarpus siliculosus]) HSP 1 Score: 215.3 bits (547), Expect = 1.500e-52 Identity = 102/163 (62.58%), Postives = 123/163 (75.46%), Query Frame = 0 Query: 14 VLFVCLGNICRSPSAEAVFKSMVAKKSLASQFHIDSCGTGGGNPGWYQEGGWSYHEGDRADSRMRAAASKRGIDITSLSRALTAEDVDKFDLLVCMDGANKSAVMEAADYWGKTSVAASKIRLMTEYCTINKGARMVPDPYYGGADGFDKVLDLLEDACEGLL 177 VLFVCLGNICRSP+AEAVFK + +K A +F IDSCGTGGGNP WY+EGG SYH GD D+RM AAA+KRG+ ++ SR LT D DKFDL+V MD AN A+ AA++WGK+ A SK+R MT YC + + VPDPYYGG GF+ VLDLL+DAC+GLL Sbjct: 82 VLFVCLGNICRSPTAEAVFKQVTSKAGDADKFEIDSCGTGGGNPSWYKEGGESYHTGDSPDARMTAAAAKRGVMLSGASRPLTPGDFDKFDLVVGMDAANTKAMSTAAEHWGKSQEAISKLRTMTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQGLL 244
BLAST of NO18G01440 vs. NCBI_GenBank
Match: XP_009517773.1 (hypothetical protein PHYSODRAFT_471431 [Phytophthora sojae] >EGZ30498.1 hypothetical protein PHYSODRAFT_471431 [Phytophthora sojae]) HSP 1 Score: 210.3 bits (534), Expect = 4.900e-51 Identity = 106/168 (63.10%), Postives = 123/168 (73.21%), Query Frame = 0 Query: 13 SVLFVCLGNICRSPSAEAVFKSMVAKK--SLASQFHIDSCGTGGGNPGWYQEGGWSYHEGDRADSRMRAAASKRGIDITSLSRALTAEDVDKFDLLVCMDGANKSAVMEAADYWGKT---SVAASKIRLMTEYCTINKGARMVPDPYYGGADGFDKVLDLLEDACEGL 176 SVLFVCLGNICRSP+ EAV K +VAKK + AS FHIDSCGTGGGNP WY GGWSYHEGD ADSRM A KRG +TS SR L +D+D+FD ++CM+ NK+AV+EAA+ WG +A KI +MT YC K A VPDP+Y G GFD VLDLLEDAC+GL Sbjct: 3 SVLFVCLGNICRSPAGEAVLKGIVAKKAGADASSFHIDSCGTGGGNPNWYGAGGWSYHEGDAADSRMTKEAKKRGYAMTSRSRPLNKQDIDEFDYIICMEDKNKTAVLEAAEAWGGAPCRDLAKQKISMMTNYCKTFKDATRVPDPWYEG--GFDHVLDLLEDACDGL 168
BLAST of NO18G01440 vs. NCBI_GenBank
Match: GAX76434.1 (hypothetical protein CEUSTIGMA_g3879.t1 [Chlamydomonas eustigma]) HSP 1 Score: 210.3 bits (534), Expect = 4.900e-51 Identity = 102/174 (58.62%), Postives = 124/174 (71.26%), Query Frame = 0 Query: 14 VLFVCLGNICRSPSAEAVFKSMVAKKSLASQFHIDSCGTGGGNPGWYQEGGWSYHEGDRADSRMRAAASKRGIDITSLSRALTAEDVDKFDLLVCMDGANKSAVMEAADYW--------GKTSVAASKIRLMTEYCTINKGARMVPDPYYGGADGFDKVLDLLEDACEGLLASM 180 V+FVCLGNICRSP+AEAVF+++V ++ ++ F IDSCGTGGGNP WY GGWSYHEGD D RM +AA KRGI +TS SR LT DV +FDL++ MD N+ AV EA YW + V SK LMT+YC KG VPDPYYGG +GF++VLDLL DACEGLL ++ Sbjct: 86 VIFVCLGNICRSPTAEAVFRAVVERRGVSHLFDIDSCGTGGGNPDWYCRGGWSYHEGDEPDRRMTSAAQKRGIVLTSRSRPLTPMDVTRFDLIIGMDAKNQYAVKEATSYWLSEGMIESSEAEVLRSKNSLMTDYCRTYKGVTEVPDPYYGGPEGFERVLDLLYDACEGLLDTL 259
BLAST of NO18G01440 vs. NCBI_GenBank
Match: OQR94018.1 (hypothetical protein THRCLA_08273 [Thraustotheca clavata]) HSP 1 Score: 209.1 bits (531), Expect = 1.100e-50 Identity = 100/168 (59.52%), Postives = 124/168 (73.81%), Query Frame = 0 Query: 14 VLFVCLGNICRSPSAEAVFKSMVAKKSLASQFHIDSCGTGGGNPGWYQEGGWSYHEGDRADSRMRAAASKRGIDITSLSRALTAEDVDKFDLLVCMDGANKSAVMEAADYWGK--TSVAASKIRLMTEYCTINKGARMVPDPYYGGADGFDKVLDLLEDACEGLLASM 180 VLFVCLGNICRSP+AE VFK++VAK + ++++ IDSCGTGGG GWY+ GWSYHEGD ADSRM+ A KRG +TS SR L ED+ +FD ++CMD N AV+EAA +WG +A +K+ M +YC +NKGA VPDP+Y G GFD VLDLLEDACEGL + Sbjct: 5 VLFVCLGNICRSPAAEGVFKAVVAKDNASAKYDIDSCGTGGGASGWYKPNGWSYHEGDSADSRMKKEAKKRGYHLTSKSRPLNPEDLHRFDHIICMDNNNVQAVLEAARFWGAEYEQLAKAKVSTMCQYCIVNKGATRVPDPWYEG--GFDTVLDLLEDACEGLYTQL 170
BLAST of NO18G01440 vs. NCBI_GenBank
Match: PNW73456.1 (hypothetical protein CHLRE_14g632767v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 207.6 bits (527), Expect = 3.200e-50 Identity = 104/174 (59.77%), Postives = 125/174 (71.84%), Query Frame = 0 Query: 14 VLFVCLGNICRSPSAEAVFKSMVAKKSLASQFHIDSCGTGGGNPGWYQEGGWSYHEGDRADSRMRAAASKRGIDITSLSRALTAEDVDKFDLLVCMDGANKSAVMEAADYW-----GKTSVA---ASKIRLMTEYCTINKGARMVPDPYYGGADGFDKVLDLLEDACEGLLASM 180 VLFVCLGNICRSP+AEAVF+++V + LA F IDSCGTGGGNP W+ EGGWSYHEGD ADSRM A KRG+ +TS SR L D +FD +V MD N A+ AADYW G +V A+++ LMT YC+ KG VPDPYYGG GF++VLDLL+DACEGLLA++ Sbjct: 100 VLFVCLGNICRSPTAEAVFRTVVQRAGLAEAFDIDSCGTGGGNPDWFTEGGWSYHEGDPADSRMTLTARKRGVQLTSRSRPLAPLDFGRFDYIVGMDAKNIRAIRTAADYWRVRPMGGDAVPADYAARLSLMTAYCSRFKGEPEVPDPYYGGPAGFERVLDLLDDACEGLLAAI 273
BLAST of NO18G01440 vs. NCBI_GenBank
Match: OQS01602.1 (hypothetical protein ACHHYP_00582 [Achlya hypogyna]) HSP 1 Score: 206.5 bits (524), Expect = 7.100e-50 Identity = 98/172 (56.98%), Postives = 126/172 (73.26%), Query Frame = 0 Query: 10 ITKSVLFVCLGNICRSPSAEAVFKSMVAKKSLASQFHIDSCGTGGGNPGWYQEGGWSYHEGDRADSRMRAAASKRGIDITSLSRALTAEDVDKFDLLVCMDGANKSAVMEAADYWGK--TSVAASKIRLMTEYCTINKGARMVPDPYYGGADGFDKVLDLLEDACEGLLASM 180 +T VLFVCLGNICRSP+AE VFK+MVA+ +++ IDSCGTGGG+ GWY+ G+SYHEG+ +DSRM+ A KRG +TS +R LT +D+ +FD ++CMD N AVMEAA +WG ++A +K+ M EYC +NKG VPDP+Y G GFD VLDLLEDACEGL + Sbjct: 1 MTTGVLFVCLGNICRSPAAEGVFKAMVARDGATAKYDIDSCGTGGGSSGWYKPNGFSYHEGENSDSRMKKEAKKRGYHLTSKARPLTRDDLHRFDHVICMDSNNVRAVMEAATFWGPEFAALAKAKVSTMCEYCIVNKGVTKVPDPWYEG--GFDTVLDLLEDACEGLYTKL 170
BLAST of NO18G01440 vs. NCBI_GenBank
Match: POM77652.1 (Phosphotyrosine protein phosphatase [Phytophthora palmivora var. palmivora]) HSP 1 Score: 206.5 bits (524), Expect = 7.100e-50 Identity = 102/167 (61.08%), Postives = 123/167 (73.65%), Query Frame = 0 Query: 13 SVLFVCLGNICRSPSAEAVFKSMVAKKSL-ASQFHIDSCGTGGGNPGWYQEGGWSYHEGDRADSRMRAAASKRGIDITSLSRALTAEDVDKFDLLVCMDGANKSAVMEAADYWGKTS---VAASKIRLMTEYCTINKGARMVPDPYYGGADGFDKVLDLLEDACEGL 176 SVLFVCLGNICRSP+ EAV K +V+K + A+ F+IDSCGTGGGNP WY GGWSYHEGD ADSRM A KRG +TS SR L +D+D+FD ++CM+ NK+AV+EAA+ WG S +A KI +MT+YC KG VPDP+Y G GFD VLDLLED C+GL Sbjct: 3 SVLFVCLGNICRSPAGEAVLKGIVSKNATDATSFYIDSCGTGGGNPNWYGAGGWSYHEGDAADSRMTKEAKKRGYVMTSRSRPLNQKDIDEFDYIICMEDKNKAAVLEAAEAWGGASCRDLAKQKISMMTDYCKTFKGVTRVPDPWYEG--GFDHVLDLLEDTCDGL 167
BLAST of NO18G01440 vs. NCBI_GenBank
Match: POM77827.1 (Phosphotyrosine protein phosphatase [Phytophthora palmivora var. palmivora]) HSP 1 Score: 206.5 bits (524), Expect = 7.100e-50 Identity = 103/167 (61.68%), Postives = 124/167 (74.25%), Query Frame = 0 Query: 13 SVLFVCLGNICRSPSAEAVFKSMVAKKSL-ASQFHIDSCGTGGGNPGWYQEGGWSYHEGDRADSRMRAAASKRGIDITSLSRALTAEDVDKFDLLVCMDGANKSAVMEAADYWGKTS---VAASKIRLMTEYCTINKGARMVPDPYYGGADGFDKVLDLLEDACEGL 176 SVLFVCLGNICRSP+ EAV K +V+K + A+ F+IDSCGTGGGNP WY GGWSYHEGD ADSRM A KRG +TS SR L +D+D+FD ++CM+ NK+AV+EAA+ WG S +A KI +MT+YC K A VPDP+Y G GFD VLDLLEDAC+GL Sbjct: 3 SVLFVCLGNICRSPAGEAVLKGIVSKNATDATSFYIDSCGTGGGNPDWYGAGGWSYHEGDAADSRMTKEAKKRGYVMTSRSRPLNQKDIDEFDYIICMEDKNKAAVLEAAEAWGGASCRDLAKQKISMMTDYCKTFKDATRVPDPWYEG--GFDHVLDLLEDACDGL 167
BLAST of NO18G01440 vs. NCBI_GenBank
Match: XP_008896922.1 (hypothetical protein PPTG_05177 [Phytophthora parasitica INRA-310] >ETI34400.1 hypothetical protein F443_19064 [Phytophthora parasitica P1569] >ETN17355.1 hypothetical protein PPTG_05177 [Phytophthora parasitica INRA-310] >ETP32436.1 hypothetical protein F442_18845 [Phytophthora parasitica P10297]) HSP 1 Score: 205.7 bits (522), Expect = 1.200e-49 Identity = 103/167 (61.68%), Postives = 122/167 (73.05%), Query Frame = 0 Query: 14 VLFVCLGNICRSPSAEAVFKSMVAKK--SLASQFHIDSCGTGGGNPGWYQEGGWSYHEGDRADSRMRAAASKRGIDITSLSRALTAEDVDKFDLLVCMDGANKSAVMEAADYWGKT---SVAASKIRLMTEYCTINKGARMVPDPYYGGADGFDKVLDLLEDACEGL 176 VLFVCLGNICRSP+ EAV K +VAKK + A+ FHIDSCGTGGGNP WY GGWSYHEG+ ADSRM A KRG +TS SR L +D+D+FD ++CM+ NK AV+EAA+ WG +A KI +MT+YC K A VPDP+Y G GFD VLDLLEDAC+GL Sbjct: 23 VLFVCLGNICRSPAGEAVLKGIVAKKAGADAASFHIDSCGTGGGNPNWYGAGGWSYHEGEAADSRMTKEAKKRGYIMTSRSRPLNKQDIDEFDYIICMEDKNKEAVLEAAEAWGGVPCRDLADQKISMMTDYCKTIKDATRVPDPWYEG--GFDHVLDLLEDACDGL 187 The following BLAST results are available for this feature:
BLAST of NO18G01440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G01440 ID=NO18G01440|Name=NO18G01440|organism=Nannochloropsis oceanica|type=gene|length=1208bpback to top protein sequence of NO18G01440.1 >NO18G01440.1-protein ID=NO18G01440.1-protein|Name=NO18G01440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=180bpback to top Synonyms
Publications
|