NO18G01430, NO18G01430 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO18G01430 vs. NCBI_GenBank
Match: GAY03579.1 (Hypothetical protein PINS_011403 [Pythium insidiosum]) HSP 1 Score: 68.6 bits (166), Expect = 2.700e-8 Identity = 66/217 (30.41%), Postives = 99/217 (45.62%), Query Frame = 0 Query: 1 MAFFGLTALGPQDPLAVSTDAVQHLHIFTDTDWKEAY------GRQLY-ENNQEHNRKKRSKIGCVATAEALPLKCVFATMEDVYH-----GSVPPADQRLFERWLRP-PSQEATITLTAFLTAVQGACTEAE--TMIASRRFDAGPSCESRSWQEYFSNLRKCKASVRAPSQKQTVPLTAQQQIDWETPAFVAASERKAIRSSEETKYASEMIKAG 203 MAFFGLT LG Q P ++ + L F+ DW++A+ G L+ E+++E + K+ T E LP ++ +YH +VP + L L + + ITL AF+ + C AE ASR SR F+ R R P +K +P+T Q + W P + + R+ +S EET+YAS M+KAG Sbjct: 1 MAFFGLTGLGSQSPFELTKET--PLCAFSPQDWQDAFMQTVRPGFTLHSESDEEVDAAKQELTRASITYEQLP-----TLLQHLYHCPKGVNNVPESSTALVLEVLADYAATQERITLGAFMQHAERICRHAEEDEAKASRYAYMKDGIRSRE----FTTTR----MARDPREKALLPMTDTQTLGWNKPTII--TTRRPTKSCEETRYASAMVKAG 200
BLAST of NO18G01430 vs. NCBI_GenBank
Match: GAY03580.1 (Hypothetical protein PINS_011402 [Pythium insidiosum]) HSP 1 Score: 66.2 bits (160), Expect = 1.300e-7 Identity = 61/222 (27.48%), Postives = 99/222 (44.59%), Query Frame = 0 Query: 1 MAFFGLTALGPQDPLAVSTDAVQHLHIFTDTDWKEAY------GRQLY-ENNQEHNRKKRSKIGCVATAEALPLKCVFATMEDVYH-----GSVPPADQRLFERWLRP-PSQEATITLTAFLTAVQGAC-------TEAETMIASRRFDAGPSCESRSWQEYFSNLRKCKASVRAPSQKQTVPLTAQQQIDWETPAFVAASERKAIRSSEETKYASEMIKAG 203 MAFFGLT LG Q P ++ + L F+ DW++A+ G L+ E+++E + K+ T E LP ++ +YH +VP + L L + + ITL AF+ + C ++ E++ + + SR K R P +K +P+T Q + W P + + R+ +S EET+YAS M+KAG Sbjct: 1 MAFFGLTGLGSQSPFELTKET--PLCAFSPQDWQDAFMQTVRPGFTLHSESDEEVDAAKQELTRASITYEQLP-----TLLQHLYHCPKGVNNVPESSTALVLEVLADYAATQERITLGAFMQHAERICRHGRRGRSQGESLSRTXEGRHPVARRSRRTSSTARRXTKHTRMARDPREKALLPMTDTQTLGWNKPTII--TTRRPTKSCEETRYASAMVKAG 213
BLAST of NO18G01430 vs. NCBI_GenBank
Match: XP_009524810.1 (hypothetical protein PHYSODRAFT_497395 [Phytophthora sojae] >EGZ22093.1 hypothetical protein PHYSODRAFT_497395 [Phytophthora sojae]) HSP 1 Score: 65.1 bits (157), Expect = 3.000e-7 Identity = 60/223 (26.91%), Postives = 99/223 (44.39%), Query Frame = 0 Query: 2 AFFGLTALGPQDPLAVSTDAVQH--LHIFTDTDWKEAY------GRQLYENNQEHNRKKRSKI-GCVATAEALPLKCVFATMEDVYHGSVPPADQRLFERWLRPPSQEA----TITLTAFLTAVQGACTEAETMIASRRF-----DAGPSCESRSWQEYFSNLRKCKASVRAPSQKQTVPLTAQQQIDWETPAFVAASERKAIRSSEETKYASEMIKAGHFLF 207 AFFGLT LG Q P D V+ +H F D+++A+ G LY + E + +++ T LP+ + +V + ++L E+ R S A +I L FL ++ C +++M ++ D + E S ++ L K + P QK P+T + W P A++RK +S EET+YA M+KAG + + Sbjct: 3 AFFGLTLLGSQSPF----DPVKETPIHAFQSRDFQDAFMQTYRPGFSLYSESDEEAQAANAELYSATITLAQLPVMLRYLYKCPRGVDNVSASTRKLVEQAFRLQSVGADASQSIDLQTFLAQMEELCRHSQSMESAAAHSAYLKDGATTREFVSNLDFLGKLVKHTRMEKDPRQKTLAPVTDSMTLGWNPPTM--ATKRKPTKSCEETRYACAMVKAGVYYY 219
BLAST of NO18G01430 vs. NCBI_GenBank
Match: POM77260.1 (Hypothetical protein PHPALM_5385 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 64.3 bits (155), Expect = 5.000e-7 Identity = 57/222 (25.68%), Postives = 104/222 (46.85%), Query Frame = 0 Query: 2 AFFGLTALGPQDPLAVSTDAVQH--LHIFTDTDWKEAY------GRQLYENNQEHNRKKRSKI-GCVATAEALPLKCVFATMEDVYHGSVPPADQRLFERWLRPPSQE---ATITLTAFLTAVQGACTEAETMIASRRF-----DAGPSCESRSWQEYFSNLRKCKASVRAPSQKQTVPLTAQQQIDWETPAFVAASERKAIRSSEETKYASEMIKAGHFLF 207 AFFGLT LG Q P D V+ +H F D+++A+ G LY + E + +++ T LP+ + +VP + + L E+ R +I L FLT ++ C ++++ ++ + D P+ E S ++ + + K + + P +K +P+T + W +P ++RK +S EET++AS M+KAG + + Sbjct: 3 AFFGLTYLGSQSPF----DPVKETPIHTFQPCDFQDAFMQTYRPGFSLYSESDEEAQAANAELDSATITLAQLPVMLRYLYKCPKGVDNVPASIRTLVEQAFRLQDGSDSCQSINLPTFLTRMEEVCRHSQSLQSAASYNAYVKDGLPTREFVSNLDFRAKMVKHQRMQKNPQEKALLPVTDTLTLGWNSPTM--ETKRKPNKSCEETRFASAMVKAGVYYY 218 The following BLAST results are available for this feature:
BLAST of NO18G01430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G01430 ID=NO18G01430|Name=NO18G01430|organism=Nannochloropsis oceanica|type=gene|length=621bpback to top protein sequence of NO18G01430.1 >NO18G01430.1-protein ID=NO18G01430.1-protein|Name=NO18G01430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=207bpback to top Synonyms
Publications
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