NO18G01410, NO18G01410 (gene) Nannochloropsis oceanica

Overview
NameNO18G01410
Unique NameNO18G01410
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2749
Alignment locationchr18:471390..474138 -

Link to JBrowse

Properties
Property NameValue
DescriptionHistone deacetylase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:471390..474138 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023696Ureohydrolase_domain
IPR000286His_deacetylse
IPR023801His_deacetylse_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
BLAST of NO18G01410 vs. NCBI_GenBank
Match: EWM23360.1 (histone deacetylase [Nannochloropsis gaditana])

HSP 1 Score: 414.8 bits (1065), Expect = 6.400e-112
Identity = 211/319 (66.14%), Postives = 245/319 (76.80%), Query Frame = 0
Query:  547 SSGFCLINNVAVGAAYARQTYGRPPSGPFARVAIIDFDIHHGNGTEACVRALKPSRLALPLPASWAPQTYELFKPWLSEAEDADNVFFGSINLVDGPHFYPCSGREVENDEVSYPNIINVELSPVRPPTATAGSTKAKGLGPKKVREFCRKASEEFRDKVERLLLPKLKAFSADLLFISAGFDGHVDDFYHYLTDEDYAWLTRELVGVMELTSGKIISVLEGGYHTRAEREGGGGLGGGKRLPGRPVGSRGIGKQGAVGNAQVSEQDDEGGAGGSGEKIGARAGGGAYINLEIDGGLAKGVMAHVIALMDDESMLKTKM 866
            SSGFCL+NNVA+GAAYARQ YGR P GPFARVAI+DFDIHHGNGTE  VRAL+PSR  LPLPASWAP+ Y+LFKPWLSE EDA +VFFGSINLVDGPHFYPCSGRE++ND+ + PNI+NVEL P+RPP A  G+ KAK LGP+KV+E+C++AS EFR+KV   LLPKLKAF+ DLLFISAGFDGHV+D YHYLT+EDYAW+TRELV V E TSGK+ISVLEGGYH R +       G GKRLPGRP  S    +  + G +  +  DDE G  G  +         ++IN E DGGLAKGVMAHV+ALMDD       M
Sbjct:    3 SSGFCLLNNVAIGAAYARQAYGRAPHGPFARVAIVDFDIHHGNGTEDIVRALQPSRRLLPLPASWAPEHYQLFKPWLSEEEDAASVFFGSINLVDGPHFYPCSGREMDNDQAA-PNIVNVELRPLRPPQAAPGTGKAKMLGPRKVKEYCQRASVEFREKVSSTLLPKLKAFAPDLLFISAGFDGHVEDHYHYLTEEDYAWITRELVAVAEGTSGKVISVLEGGYHVRPDG------GPGKRLPGRPANSTRGARAPSGGPSGATSDDDEAGRDGVVKDC------QSHINEETDGGLAKGVMAHVMALMDDAGTFNMAM 308          
BLAST of NO18G01410 vs. NCBI_GenBank
Match: CBN74846.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 310.1 bits (793), Expect = 2.200e-80
Identity = 166/317 (52.37%), Postives = 204/317 (64.35%), Query Frame = 0
Query:  461 KKERAGSLPQDEDGKGIVSQ--FLDSDTRVCRESFQVACVAAGAVIQAVDQAAAGRK-RIFVATRPPGHHAGPRGAVPSHCFWKSPSSCSSGFCLINNVAVGAAYARQTYGRPPSGPFARVAIIDFDIHHGNGTEACVRALKPSRLALPLPASWAPQTYELFKPWLSEAEDADNVFFGSINLVDGPHFYPCSGREVENDEVSYPNIINVELSPVRPPTATAGSTKAKGLGPKKVREFCRKASEEFRDKVERLLLPKLKAFSADLLFISAGFDGHVDDFYHYLTDEDYAWLTRELVGVMELTSGKIISVLEGGYHTRA 775
            KKE A    +   G+   +   ++D DTRV RES+  A  AAGAVI AVD+   G+    FVA RPPGHHAGP G+ P+  FWK+P   SSGFCL+NN A+GAAYAR  YGR  SG  +RVAI+D DIHHGNGTE  VR L+P    LPLP SW P T  ++KPWL +  DADNVFFGS++L D   FYP SG E E    +  NI+NV LSP+ P        K + L   KV E+  KA  EF+ K +R LL +LK FS DLL ISAGFDGHV+D+YHYL++E Y W+T  L       +G+++SVLEGGY   A
Sbjct:  504 KKEEAAGDARGGFGRRFEADVGYVDVDTRVSRESYGAARTAAGAVILAVDRVVQGKNPNAFVAVRPPGHHAGPSGSAPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGR--SGELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDG-DADNVFFGSVSLQDKDLFYPASGTEEERFNDNDANIVNVSLSPLGP--TPGDEPKKRALTKTKVTEYTNKACNEFKQKCQRTLLARLKEFSPDLLIISAGFDGHVEDYYHYLSNEVYEWVTLALADC--CPTGRVVSVLEGGYSLEA 813          
BLAST of NO18G01410 vs. NCBI_GenBank
Match: OQS07634.1 (histone deacetylase [Thraustotheca clavata])

HSP 1 Score: 268.9 bits (686), Expect = 5.600e-68
Identity = 146/311 (46.95%), Postives = 196/311 (63.02%), Query Frame = 0
Query:  482 LDSDTRVCRESFQVACVAAGAVIQAVDQAAAGRKR-IFVATRPPGHHAGPRGAVPSHCFWKSPSSCSSGFCLINNVAVGAAYARQTY-------GRPPSGPFARVAIIDFDIHHGNGTEACVRALKPSRLALPLPASWAPQTYELFKPWLSEAEDADNVFFGSINLVDGP-HFYPCSGR--EVENDEVSYPNIINVELSPVRP--PTATAGSTKAKGLGPKKVREFCRKASEEFRDKVERLLLPKLKAFSADLLFISAGFDGHVDDFYHYLTDEDYAWLTRELVGVM-ELTSGKIISVLEGGYHTRAEREG 779
            LD DT +  ESF+ A +A GAV+ AVD+   G  R  FV  RPPGHHAGP G V +  F ++P +CS+GFCL+NNVA+ AAYA   Y       G  P     RVAI+DFDIHHGNGTE  +R L P     PLPASWAP+++  + PW  +++DA NV+F S++L D    FYP SG+    ++D  +  NI+N+ L  + P   + +  STK +       + F  +ASEEFR K   +L P L AF+ DL+ ISAGFDGHVDD+YH+LT+ DY W+T +LV +  E   G+I+SVLEGGY+ ++   G
Sbjct:  191 LDHDTALSSESFKSALLAVGAVLHAVDKVVQGDNRNAFVVIRPPGHHAGPYGCVENDAFHEAPDTCSNGFCLLNNVAIAAAYAMSNYSTSYYSAGVSPFAEIRRVAIVDFDIHHGNGTEEIIRNLYPHYHRYPLPASWAPKSFHSYMPW-RDSQDAQNVYFASLHLHDDQVPFYPGSGKGPHGQHDLANAENIVNIPLKRLIPHGKSPSDCSTKIR-------KTFIEQASEEFRLKASSILFPSLLAFNPDLILISAGFDGHVDDYYHFLTEWDYEWITEKLVDIADECCCGRIVSVLEGGYNLQSHNAG 493          
BLAST of NO18G01410 vs. NCBI_GenBank
Match: GAY06681.1 (Hypothetical protein PINS_014486, partial [Pythium insidiosum])

HSP 1 Score: 266.2 bits (679), Expect = 3.700e-67
Identity = 179/552 (32.43%), Postives = 231/552 (41.85%), Query Frame = 0
Query:  220 YPPVCLQHETLNHQESVDRLVCLVDPHKGVLRRKRFANLEWADGTNFAPATTSDLLRVHEYDYIRHLQNICNSLPP-----TPCCQEKQGGEGVEGDSSSLLATLPALFQPRHSPAQPPAELLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFPVHLLKALAEVRXXXXXXXXXXXXXXXXXXXXXXXXXXQGPEDRSGEAFDKKERAGSLPQDEDGKGIVSQFLDSDTRVCRESFQVACVAAGAVIQAVDQAA-AGRKRIFVATRPPGHHAGPRGAVPSHCFWKSPSSCSSGFCLINNVAVGAAYARQTYG--------RPPSGPFARVAIIDFDIHHGNGTEACVRALKPSRLALPLPASWAPQTYELFKPWLSEAEDADNVFFGSINLVDGPHFYPCSGREVENDEVSY---PNIINVELSPVRPPTATAGSTKAKGLGPKKVREFCRKASEEFRDKVERLLLPKLKAFSADLLFISAGFDGHVDDFYHYLTDEDYAWLTRELVGV 755
            + P CL H    HQE+  RL  L  P  GVL + RF +LEWAD     P   +D+LRVH + YI+HL+  C +LPP     T        G+  + + +SL         P H   Q P                                                                                                                         +   F+ +                S   DSD+ + R S+  A +AAGAV  A+DQ      +  FV  RPPGHHAGP G V S  F + P  C+ GFCL+NN+A+GAAYA  TYG         P      R+AI+DFDIHHGNGTE  +R L P     PLPASWAP ++  ++PW  E  D DNVFF SI+L DG  FYP SG     D        NI+N+ L  + P          + L  K  R    KAS+ FRD+V R L+P L+ F  DL+ +SAGFDGH DDFY++LT++DYAW+T +L  V
Sbjct:   56 FQPTCLDHHNDQHQENRARLTQLAGP-DGVLHKPRFRSLEWADLRALRPVRMADMLRVHSFSYIQHLEKSCGALPPQSDKITVGPLHPLDGDDDDDEGASL---------PYHEWLQSP------------------------------------------------------------------------------------------------------------------------HAQRCFEVEHPPS------------SGHFDSDSPISRSSYLAARLAAGAVCHAIDQVVHRSTRNAFVVVRPPGHHAGPNGCVDSQGFHRRPEMCTCGFCLLNNIAIGAAYALHTYGPSYAPSVATPERATIQRLAIVDFDIHHGNGTEEIIRNLVPHEQRYPLPASWAPLSFSSYQPWRDE-RDVDNVFFASIHLFDGDDFYPGSGVGPSGDSAELQQRSNILNLPLDFLGPKYL----EDRERLSMKAKRSLMEKASKTFRDRVTRQLVPALRRFQPDLILLSAGFDGHADDFYYFLTEDDYAWVTDQLTSV 460          
BLAST of NO18G01410 vs. NCBI_GenBank
Match: XP_008621273.1 (hypothetical protein SDRG_16829 [Saprolegnia diclina VS20] >EQC25307.1 hypothetical protein SDRG_16829 [Saprolegnia diclina VS20])

HSP 1 Score: 264.2 bits (674), Expect = 1.400e-66
Identity = 148/303 (48.84%), Postives = 187/303 (61.72%), Query Frame = 0
Query:  482 LDSDTRVCRESFQVACVAAGAVIQAVDQAAAGRKR-IFVATRPPGHHAGPRGAVPSHCFWKSPSSCSSGFCLINNVAVGAAYARQTYGRPPS---------GPFARVAIIDFDIHHGNGTEACVRALKPSRLALPLPASWAPQTYELFKPWLSEAEDADNVFFGSINLVD-GPHFYPCSGR--EVENDEVSYPNIINVELSPVRPPTATAGSTKAKGLGPKKVREFCRKASEEFRDKVERLLLPKLKAFSADLLFISAGFDGHVDDFYHYLTDEDYAWLTRELVGVME-LTSGKIISVLEGGY 771
            LD D  + +ESF  A  A GAV+ AVD+   GR R  FV  RPPGHHAGP G V +  F KSP  CS GFCL+NNVA+GAAYA  TYG  PS             RVAIIDFDIHHGNGTE  VR L+      PLP SWAP+T+  + PW  + +DADNVFF S+++ D    FYP SGR     N+  S   I+N+       P    G++  +G    ++ E   +AS EF+ K   +LLP L+AF+ DL+ IS+GFDGHVDD+YH LT+ DY W+T+ LV + +    G+I+SVLEGGY
Sbjct:  222 LDPDMPISKESFMTARYAVGAVLHAVDEVVCGRSRNAFVVVRPPGHHAGPYGCVENDAFHKSPGGCSCGFCLLNNVAIGAAYAMTTYG--PSHYSKASISHATVRRVAIIDFDIHHGNGTEEIVRNLRLHDHRYPLPPSWAPKTFPSYMPWRDD-DDADNVFFASMHVYDETTAFYPGSGRGPHGRNELASCNTIVNI-------PLTNLGASGKRGTERTRL-EHMERASSEFQSKATEVLLPALRAFAPDLILISSGFDGHVDDYYHGLTEWDYEWITQRLVEIADNCCDGRIVSVLEGGY 513          
BLAST of NO18G01410 vs. NCBI_GenBank
Match: ETL26000.1 (hypothetical protein L916_20220 [Phytophthora parasitica])

HSP 1 Score: 260.0 bits (663), Expect = 2.600e-65
Identity = 183/579 (31.61%), Postives = 245/579 (42.31%), Query Frame = 0
Query:  220 YPPVCLQHETLNHQESVDRLVCLVDPHKGVLRRKRFANLEWADGTNFAPATTSDLLRVHEYDYIRHLQNICNSLPPTPCCQEKQGGEGVEGDSSSLLATLPALFQPRHSPAQPPAELLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFPVHLLKALAEVRXXXXXXXXXXXXXXXXXXXXXXXXXXQGPEDRSGEAFDKKERAGSLPQDEDGKGIVSQFLDSDTRVCRESFQVACVAAGAVIQAVDQAAAGR-KRIFVATRPPGHHAGPRGAVPSHCFWKSPSSCSSGFCLINNVAVGAAYARQTYGRPPSGP------------------FARVAIIDFDIHHGNGTEACVRALKPSRLALPLPASWAPQTYELFKPWLSEAEDADNVFFGSINLVDGPHFYPCSGR-------EVENDEVSYPNIINVELSPVRPPTATAGSTKAKGLGPKKVREFCRKASEEFRDKVERLLLPKLKAFSADLLFISAGFDGHVDDFYHYLTDEDYAWLTRELVGVM-ELTSGKIISVLEGGYH 772
            Y P CL H   +HQES  RL C++   +GVL + RF +L+WA+     PA  +D+LRVH  +YI+HL++ C +LP              E +   L+ TL       +   +   EL                                                                            H LK                                        E  D+   AGS               D D+ + + S+  A +AAGAV  A+D+      K  FV  RPPGHHAGP G V    F   P  C+ GFCLINNV +GA+YA   Y  P   P                    RVAI+DFDIHHGNGTE  +R L P +   PLP SWAP  +  +KPW  E  D DNVFF SI+L D  +FYPCSG        E+E  +    NI+N+ L  + P        +   L  K  R    ++S+ FR+ V + L+P L  F  DL+ +SAGFDGH DDFY++L+++DY W+T ++  V  E   G+I+SVLEGGY+
Sbjct:  268 YQPTCLDHHNDSHQESRQRL-CVLGGPEGVLHKDRFKDLKWANLNELRPARLNDILRVHTIEYIQHLEHACGNLP--------------EQNKKYLVGTL-------YDKHKGDKELTYAEWLQTE-------------------------------------------------------------------HALKCF--------------------------------------EVGDQPS-AGS--------------FDMDSPISKSSYMAARMAAGAVCHAIDKVLNNETKNAFVVVRPPGHHAGPNGCVEGEGFHLRPEMCTCGFCLINNVCIGASYAMSNYSSPFYTPAISSMNSDSLLSSTKRANIQRVAIVDFDIHHGNGTEEVIRNLIPHKQNYPLPPSWAPVQFSSYKPWRDE-NDPDNVFFSSIHLYDDDNFYPCSGMGPHGCSPELEKSK----NIVNLPLKVLGPKYL----DERLKLTSKAKRSLMEQSSKTFRNNVTKKLIPALTKFQPDLIMLSAGFDGHADDFYYFLSEDDYGWITDQITAVADECCDGRIVSVLEGGYN 695          
BLAST of NO18G01410 vs. NCBI_GenBank
Match: ETI32171.1 (hypothetical protein F443_20944 [Phytophthora parasitica P1569])

HSP 1 Score: 259.6 bits (662), Expect = 3.400e-65
Identity = 183/579 (31.61%), Postives = 244/579 (42.14%), Query Frame = 0
Query:  220 YPPVCLQHETLNHQESVDRLVCLVDPHKGVLRRKRFANLEWADGTNFAPATTSDLLRVHEYDYIRHLQNICNSLPPTPCCQEKQGGEGVEGDSSSLLATLPALFQPRHSPAQPPAELLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFPVHLLKALAEVRXXXXXXXXXXXXXXXXXXXXXXXXXXQGPEDRSGEAFDKKERAGSLPQDEDGKGIVSQFLDSDTRVCRESFQVACVAAGAVIQAVDQAAAGR-KRIFVATRPPGHHAGPRGAVPSHCFWKSPSSCSSGFCLINNVAVGAAYARQTYGRPPSGP------------------FARVAIIDFDIHHGNGTEACVRALKPSRLALPLPASWAPQTYELFKPWLSEAEDADNVFFGSINLVDGPHFYPCSGR-------EVENDEVSYPNIINVELSPVRPPTATAGSTKAKGLGPKKVREFCRKASEEFRDKVERLLLPKLKAFSADLLFISAGFDGHVDDFYHYLTDEDYAWLTRELVGVM-ELTSGKIISVLEGGYH 772
            Y P CL H   +HQES  RL C++   +GVL + RF +L+WA+     PA  +D+LRVH  +YI+HL+  C +LP              E +   L+ TL       +   +   EL                                                                            H LK                                        E  D+   AGS               D D+ + + S+  A +AAGAV  A+D+      K  FV  RPPGHHAGP G V    F   P  C+ GFCLINNV +GA+YA   Y  P   P                    RVAI+DFDIHHGNGTE  +R L P +   PLP SWAP  +  +KPW  E  D DNVFF SI+L D  +FYPCSG        E+E  +    NI+N+ L  + P        +   L  K  R    ++S+ FR+ V + L+P L  F  DL+ +SAGFDGH DDFY++L+++DY W+T ++  V  E   G+I+SVLEGGY+
Sbjct:  268 YQPTCLDHHNDSHQESRQRL-CVLGGPEGVLHKDRFKDLKWANLNELRPARLNDILRVHTIEYIQHLERACGNLP--------------EQNKKYLVGTL-------YDKHKGDKELTYAEWLQTE-------------------------------------------------------------------HALKCF--------------------------------------EVGDQPS-AGS--------------FDMDSPISKSSYMAARMAAGAVCHAIDKVLNNETKNAFVVVRPPGHHAGPNGCVEGEGFHLRPEMCTCGFCLINNVCIGASYAMSNYSSPFYTPAISSMNSDSLLSSTKRANIQRVAIVDFDIHHGNGTEEVIRNLIPHKQNYPLPPSWAPVQFSSYKPWRDE-NDPDNVFFSSIHLYDDDNFYPCSGMGPHGCSPELEKSK----NIVNLPLKVLGPKYL----DERLKLTSKAKRSLMEQSSKTFRNNVTKKLIPALTKFQPDLIMLSAGFDGHADDFYYFLSEDDYGWITDQITAVADECCDGRIVSVLEGGYN 695          
BLAST of NO18G01410 vs. NCBI_GenBank
Match: ETK72548.1 (hypothetical protein L915_20357 [Phytophthora parasitica])

HSP 1 Score: 259.6 bits (662), Expect = 3.400e-65
Identity = 183/579 (31.61%), Postives = 245/579 (42.31%), Query Frame = 0
Query:  220 YPPVCLQHETLNHQESVDRLVCLVDPHKGVLRRKRFANLEWADGTNFAPATTSDLLRVHEYDYIRHLQNICNSLPPTPCCQEKQGGEGVEGDSSSLLATLPALFQPRHSPAQPPAELLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFPVHLLKALAEVRXXXXXXXXXXXXXXXXXXXXXXXXXXQGPEDRSGEAFDKKERAGSLPQDEDGKGIVSQFLDSDTRVCRESFQVACVAAGAVIQAVDQAAAGR-KRIFVATRPPGHHAGPRGAVPSHCFWKSPSSCSSGFCLINNVAVGAAYARQTYGRPPSGP------------------FARVAIIDFDIHHGNGTEACVRALKPSRLALPLPASWAPQTYELFKPWLSEAEDADNVFFGSINLVDGPHFYPCSGR-------EVENDEVSYPNIINVELSPVRPPTATAGSTKAKGLGPKKVREFCRKASEEFRDKVERLLLPKLKAFSADLLFISAGFDGHVDDFYHYLTDEDYAWLTRELVGVM-ELTSGKIISVLEGGYH 772
            Y P CL H   +HQES  RL C++   +GVL + RF +L+WA+     PA  +D+LRVH  +YI+HL++ C +LP              E +   L+ TL       +   +   EL                                                                            H LK                                 G  D+          AGS               D D+ + + S+  A +AAGAV  A+D+      K  FV  RPPGHHAGP G V    F   P  C+ GFCLINNV +GA+YA   Y  P   P                    RVAI+DFDIHHGNGTE  +R L P +   PLP SWAP  +  +KPW  E  D DNVFF SI+L D  +FYPCSG        E+E  +    NI+N+ L  + P        +   L  K  R    ++S+ FR+ V + L+P L  F  DL+ +SAGFDGH DDFY++L+++DY W+T ++  V  E   G+I+SVLEGGY+
Sbjct:  268 YQPTCLDHHNDSHQESRQRL-CVLGGPEGVLHKDRFKDLKWANLNELRPARLNDILRVHTIEYIQHLEHACGNLP--------------EQNKKYLVGTL-------YDKHKGDKELTYAEWLQTE-------------------------------------------------------------------HALKCF-------------------------------GVGDQPS--------AGS--------------FDMDSPISKSSYMAARMAAGAVCHAIDKVLNNETKNAFVVVRPPGHHAGPNGCVEGEGFHLRPEMCTCGFCLINNVCIGASYAMSNYSSPFYTPAISSMNSDSLLSSTKRANIQRVAIVDFDIHHGNGTEEAIRNLIPHKQNYPLPPSWAPVQFSSYKPWRDE-NDPDNVFFSSIHLYDDDNFYPCSGMGPHGCSPELEKSK----NIVNLPLKVLGPKYL----DERLKLTSKAKRSLMEQSSKTFRNNVTKKLIPALTKFQPDLIMLSAGFDGHADDFYYFLSEDDYGWITDQITAVADECCDGRIVSVLEGGYN 695          
BLAST of NO18G01410 vs. NCBI_GenBank
Match: ETL79213.1 (hypothetical protein L917_20092 [Phytophthora parasitica])

HSP 1 Score: 259.6 bits (662), Expect = 3.400e-65
Identity = 183/579 (31.61%), Postives = 244/579 (42.14%), Query Frame = 0
Query:  220 YPPVCLQHETLNHQESVDRLVCLVDPHKGVLRRKRFANLEWADGTNFAPATTSDLLRVHEYDYIRHLQNICNSLPPTPCCQEKQGGEGVEGDSSSLLATLPALFQPRHSPAQPPAELLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFPVHLLKALAEVRXXXXXXXXXXXXXXXXXXXXXXXXXXQGPEDRSGEAFDKKERAGSLPQDEDGKGIVSQFLDSDTRVCRESFQVACVAAGAVIQAVDQAAAGR-KRIFVATRPPGHHAGPRGAVPSHCFWKSPSSCSSGFCLINNVAVGAAYARQTYGRPPSGP------------------FARVAIIDFDIHHGNGTEACVRALKPSRLALPLPASWAPQTYELFKPWLSEAEDADNVFFGSINLVDGPHFYPCSGR-------EVENDEVSYPNIINVELSPVRPPTATAGSTKAKGLGPKKVREFCRKASEEFRDKVERLLLPKLKAFSADLLFISAGFDGHVDDFYHYLTDEDYAWLTRELVGVM-ELTSGKIISVLEGGYH 772
            Y P CL H   +HQES  RL C++   +GVL + RF +L+WA+     PA  +D+LRVH  +YI+HL+  C +LP              E +   L+ TL       +   +   EL                                                                            H LK                                        E  D+   AGS               D D+ + + S+  A +AAGAV  A+D+      K  FV  RPPGHHAGP G V    F   P  C+ GFCLINNV +GA+YA   Y  P   P                    RVAI+DFDIHHGNGTE  +R L P +   PLP SWAP  +  +KPW  E  D DNVFF SI+L D  +FYPCSG        E+E  +    NI+N+ L  + P        +   L  K  R    ++S+ FR+ V + L+P L  F  DL+ +SAGFDGH DDFY++L+++DY W+T ++  V  E   G+I+SVLEGGY+
Sbjct:  268 YQPTCLDHHNDSHQESRQRL-CVLGGPEGVLHKDRFKDLKWANLNELRPARLNDILRVHTIEYIQHLERACGNLP--------------EQNKKYLVGTL-------YDKHKGDKELTYAEWLQTE-------------------------------------------------------------------HALKCF--------------------------------------EVGDQPS-AGS--------------FDMDSPISKSSYMAARMAAGAVCHAIDKVLNNETKNAFVVVRPPGHHAGPNGCVEGEGFHLRPEMCTCGFCLINNVCIGASYAMSNYSSPFYTPAISSMNSDSLLSSTKRANIQRVAIVDFDIHHGNGTEEVIRNLIPHKQNYPLPPSWAPVQFSSYKPWRDE-NDPDNVFFSSIHLYDDDNFYPCSGMGPHGCSPELEKSK----NIVNLPLKVLGPKYL----DERLKLTSKAKRSLMEQSSKTFRNNVTKKLIPALTKFQPDLIMLSAGFDGHADDFYYFLSEDDYGWITDQITAVADECCDGRIVSVLEGGYN 695          
BLAST of NO18G01410 vs. NCBI_GenBank
Match: ETM32455.1 (hypothetical protein L914_20124 [Phytophthora parasitica])

HSP 1 Score: 259.6 bits (662), Expect = 3.400e-65
Identity = 183/579 (31.61%), Postives = 244/579 (42.14%), Query Frame = 0
Query:  220 YPPVCLQHETLNHQESVDRLVCLVDPHKGVLRRKRFANLEWADGTNFAPATTSDLLRVHEYDYIRHLQNICNSLPPTPCCQEKQGGEGVEGDSSSLLATLPALFQPRHSPAQPPAELLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFPVHLLKALAEVRXXXXXXXXXXXXXXXXXXXXXXXXXXQGPEDRSGEAFDKKERAGSLPQDEDGKGIVSQFLDSDTRVCRESFQVACVAAGAVIQAVDQAAAGR-KRIFVATRPPGHHAGPRGAVPSHCFWKSPSSCSSGFCLINNVAVGAAYARQTYGRPPSGP------------------FARVAIIDFDIHHGNGTEACVRALKPSRLALPLPASWAPQTYELFKPWLSEAEDADNVFFGSINLVDGPHFYPCSGR-------EVENDEVSYPNIINVELSPVRPPTATAGSTKAKGLGPKKVREFCRKASEEFRDKVERLLLPKLKAFSADLLFISAGFDGHVDDFYHYLTDEDYAWLTRELVGVM-ELTSGKIISVLEGGYH 772
            Y P CL H   +HQES  RL C++   +GVL + RF +L+WA+     PA  +D+LRVH  +YI+HL+  C +LP              E +   L+ TL       +   +   EL                                                                            H LK                                        E  D+   AGS               D D+ + + S+  A +AAGAV  A+D+      K  FV  RPPGHHAGP G V    F   P  C+ GFCLINNV +GA+YA   Y  P   P                    RVAI+DFDIHHGNGTE  +R L P +   PLP SWAP  +  +KPW  E  D DNVFF SI+L D  +FYPCSG        E+E  +    NI+N+ L  + P        +   L  K  R    ++S+ FR+ V + L+P L  F  DL+ +SAGFDGH DDFY++L+++DY W+T ++  V  E   G+I+SVLEGGY+
Sbjct:  268 YQPTCLDHHNDSHQESRQRL-CVLGGPEGVLHKDRFKDLKWANLNELRPARLNDILRVHTIEYIQHLERACGNLP--------------EQNKKYLVGTL-------YDKHKGDKELTYAEWLQTE-------------------------------------------------------------------HALKCF--------------------------------------EVGDQPS-AGS--------------FDMDSPISKSSYMAARMAAGAVCHAIDKVLNNETKNAFVVVRPPGHHAGPNGCVEGEDFHLRPEMCTCGFCLINNVCIGASYAMSNYSSPFYTPAISSMNSDSLLSSTKRANIQRVAIVDFDIHHGNGTEEVIRNLIPHKQNYPLPPSWAPVQFSSYKPWRDE-NDPDNVFFSSIHLYDDDNFYPCSGMGPHGCSPELEKSK----NIVNLPLKVLGPKYL----DERLKLTSKAKRSLMEQSSKTFRNNVTKKLIPALTKFQPDLIMLSAGFDGHADDFYYFLSEDDYGWITDQITAVADECCDGRIVSVLEGGYN 695          
The following BLAST results are available for this feature:
BLAST of NO18G01410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23360.16.400e-11266.14histone deacetylase [Nannochloropsis gaditana][more]
CBN74846.12.200e-8052.37conserved unknown protein [Ectocarpus siliculosus][more]
OQS07634.15.600e-6846.95histone deacetylase [Thraustotheca clavata][more]
GAY06681.13.700e-6732.43Hypothetical protein PINS_014486, partial [Pythium... [more]
XP_008621273.11.400e-6648.84hypothetical protein SDRG_16829 [Saprolegnia dicli... [more]
ETL26000.12.600e-6531.61hypothetical protein L916_20220 [Phytophthora para... [more]
ETI32171.13.400e-6531.61hypothetical protein F443_20944 [Phytophthora para... [more]
ETK72548.13.400e-6531.61hypothetical protein L915_20357 [Phytophthora para... [more]
ETL79213.13.400e-6531.61hypothetical protein L917_20092 [Phytophthora para... [more]
ETM32455.13.400e-6531.61hypothetical protein L914_20124 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR060ncniR060Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003998NSK003998Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G01410.1NO18G01410.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|608007gene_9070Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100057g13gene7101Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G01410.1NO18G01410.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G01410 ID=NO18G01410|Name=NO18G01410|organism=Nannochloropsis oceanica|type=gene|length=2749bp
ATGGCGGCTCGGCGGACGACTCGACGCAACACAAATAGCCTTTCGCCGCC
TCCCGACGAGGAGAAAGGAGATGTTGACGGGAGCAGCAGCCGGCGCAGCA
GTGGAGCCAGCAGCAGTGGAGCCAGCAGCAGCGCCAGCATGGCTTCTCCG
CCCTATTACGACAGCGTCGCTCCCAGCCAAGAGTCGGAGGACTTCTTGAG
TGAGCAGTTTCATCGCCAAGTGAGTCTGCAACAGCTGCAACAGGAGAATC
AGATTTCTTCGTCCTCGTCCTCTTCTTCCACGGCCCCGCCTCCGCCATTG
TTGACAACAGTAGTGCCCCCTCCACCGCCTTCCTTCCACCCTCCCGGCAT
GCACAAACGGGAGCTGTCTTCGCCTAGTATAAGTCGCCTGTGCTCCGTTA
ATTCAGTCGAGATGCAGCTGGAAGGCGAAGGCCAACCAGGAAGCATGCTC
AACTGCGCTTTTTCCACTACTCTTCCCTCAACCAAAAAAAGTAACGGGAA
CGACACCCCCATGGGTATTCGGGCCCTCAAACAGAGCATACCTCCGCAAT
CTCCGGGGGAATCAGCCTTGTATTCTTTTGGAGGAGCGGCTTTTCCTCCC
CCACCGCCGTCGCAGGAGGTGATGAGTGCCGCCATGTCGACTCGCATGCT
CGTCATTTATCCTCCTGTCTGCCTCCAACATGAGACGCTAAATCATCAAG
AGAGTGTGGATCGATTAGTATGCTTGGTGGACCCGCATAAAGGGGTTTTG
AGACGGAAGCGGTTTGCGAACCTGGAATGGGCAGATGGAACGAATTTCGC
TCCTGCTACCACCTCGGACTTGCTTCGTGTACATGAGTATGATTACATCC
GGCATTTGCAAAACATTTGCAACTCGTTGCCGCCCACCCCTTGCTGCCAG
GAAAAGCAGGGAGGAGAAGGAGTGGAAGGAGATTCTTCTTCTCTCCTCGC
CACCTTGCCCGCCCTCTTCCAGCCCCGGCATTCCCCCGCCCAACCTCCGG
CGGAGCTGCTGCGGCCCTCTTCCTTGGCTTCCCCGAACTCCCTTTCTCCC
TCTTCCTCTGAGGCACCCTCCCCTGCAGATGGTGAGAAAAATTCTACCAG
AGAGGGTTCTGCCTACAACGCCAGCAGCAATATGAAAGGTAGCTGTAGCG
GCAACGGCAGCAGCAGCAGCAGCAACAGCAGCAGGCGGGCGCCTCTAAGC
GTGCGGCACCACACGTCTATCCGTGACTTTCCCGTGCATTTGTTGAAAGC
GCTGGCGGAGGTCAGAGAGGAGGATGAGGAGGAAGGCGGGGGCGAGGAAG
GAGGGCACCCTCCTACCCAGGAGCAGCAGCAGTACGGGCGAAGGCAAGGC
CCGGAGGACCGCAGCGGTGAAGCTTTTGACAAGAAGGAGCGGGCGGGAAG
TCTTCCTCAAGACGAGGATGGCAAGGGCATTGTCTCTCAGTTCTTAGACT
CTGACACGCGTGTTTGTCGCGAATCCTTTCAAGTGGCGTGCGTTGCTGCC
GGGGCCGTCATTCAAGCCGTCGATCAAGCAGCCGCTGGTCGCAAACGTAT
TTTTGTTGCTACCCGTCCTCCGGGCCACCACGCCGGTCCTCGAGGCGCTG
TGCCTAGCCACTGCTTTTGGAAGTCCCCCTCCTCCTGCTCCTCGGGATTT
TGTTTGATCAATAACGTGGCGGTCGGCGCGGCATATGCTAGGCAAACCTA
TGGCCGTCCCCCCTCCGGGCCCTTCGCTCGAGTCGCCATCATCGATTTTG
ACATTCACCACGGAAATGGAACGGAAGCCTGTGTAAGAGCACTGAAACCC
TCGCGACTAGCTCTCCCCCTCCCTGCCTCCTGGGCACCCCAGACCTACGA
ACTGTTCAAGCCCTGGCTGTCCGAGGCAGAGGATGCCGACAACGTCTTCT
TCGGGAGCATCAACCTGGTGGACGGCCCGCATTTCTACCCTTGTTCGGGG
CGAGAAGTCGAGAATGACGAGGTCTCATACCCGAACATAATCAACGTGGA
GCTCTCCCCCGTCAGGCCGCCAACAGCAACAGCAGGGTCGACCAAGGCGA
AAGGGCTAGGCCCCAAAAAAGTGAGGGAGTTCTGCAGAAAGGCGAGTGAA
GAGTTCAGGGACAAGGTGGAAAGGTTGTTGCTGCCGAAGCTCAAGGCTTT
CAGCGCCGATTTGTTATTCATCTCCGCAGGgtacgtttaagggaaagcga
ggggggggggaagggaaggaggaagggaacacggcggaagcttattatcc
gcttgattcacgcgcgccacccacctctatttccattaagtcaatctccc
cgccctttcttacctccttcttccgccctagATTTGATGGCCACGTGGAT
GACTTTTATCACTACTTGACTGACGAGGACTATGCGTGGCTCACGCGCGA
GTTGGTGGGCGTCATGGAGCTGACCTCTGGGAAAATCATCAGTGTGCTTG
AAGGGGGTTACCATACCCGTGCGGAGAGAGAAGGAGGGGGAGGGCTTGGG
GGAGGGAAACGTTTGCCGGGTCGCCCAGTGGGCTCTAGGGGGATAGGAAA
GCAGGGGGCCGTGGGTAATGCGCAAGTTTCTGAGCAGGATGATGAAGGAG
GAGCAGGTGGAAGTGGGGAAAAAATTGGAGCAAGAGCAGGAGGAGGGGCT
TACATTAATTTGGAGATTGATGGGGGATTGGCGAAGGGGGTCATGGCGCA
TGTGATTGCTTTGATGGACGATGAGAGTATGTTGAAGACGAAGATGTAG
back to top

protein sequence of NO18G01410.1

>NO18G01410.1-protein ID=NO18G01410.1-protein|Name=NO18G01410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=866bp
MAARRTTRRNTNSLSPPPDEEKGDVDGSSSRRSSGASSSGASSSASMASP
PYYDSVAPSQESEDFLSEQFHRQVSLQQLQQENQISSSSSSSSTAPPPPL
LTTVVPPPPPSFHPPGMHKRELSSPSISRLCSVNSVEMQLEGEGQPGSML
NCAFSTTLPSTKKSNGNDTPMGIRALKQSIPPQSPGESALYSFGGAAFPP
PPPSQEVMSAAMSTRMLVIYPPVCLQHETLNHQESVDRLVCLVDPHKGVL
RRKRFANLEWADGTNFAPATTSDLLRVHEYDYIRHLQNICNSLPPTPCCQ
EKQGGEGVEGDSSSLLATLPALFQPRHSPAQPPAELLRPSSLASPNSLSP
SSSEAPSPADGEKNSTREGSAYNASSNMKGSCSGNGSSSSSNSSRRAPLS
VRHHTSIRDFPVHLLKALAEVREEDEEEGGGEEGGHPPTQEQQQYGRRQG
PEDRSGEAFDKKERAGSLPQDEDGKGIVSQFLDSDTRVCRESFQVACVAA
GAVIQAVDQAAAGRKRIFVATRPPGHHAGPRGAVPSHCFWKSPSSCSSGF
CLINNVAVGAAYARQTYGRPPSGPFARVAIIDFDIHHGNGTEACVRALKP
SRLALPLPASWAPQTYELFKPWLSEAEDADNVFFGSINLVDGPHFYPCSG
REVENDEVSYPNIINVELSPVRPPTATAGSTKAKGLGPKKVREFCRKASE
EFRDKVERLLLPKLKAFSADLLFISAGFDGHVDDFYHYLTDEDYAWLTRE
LVGVMELTSGKIISVLEGGYHTRAEREGGGGLGGGKRLPGRPVGSRGIGK
QGAVGNAQVSEQDDEGGAGGSGEKIGARAGGGAYINLEIDGGLAKGVMAH
VIALMDDESMLKTKM*
back to top
Synonyms
Publications