NO18G01340, NO18G01340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G01340 vs. NCBI_GenBank
Match: EWM23359.1 (Transmembrane adaptor Erv26 [Nannochloropsis gaditana]) HSP 1 Score: 305.8 bits (782), Expect = 1.100e-79 Identity = 161/229 (70.31%), Postives = 183/229 (79.91%), Query Frame = 0 Query: 1 MGYVLVAIGYVAGYLAILFQAICIACGLYYAAELAEEYASATKRIIAYSVLAVVALHGLLLVESFPIFLLAGGIACHAVYGWLIIDFPNVEVFSLKFLFALGALCADHYIWFQYLQSRPPTIKSAFQSMAIFFLLVWFVPFALFVSLSVNDNVLPSIGSSATSGYSSTSSDAMYYSDYSTASGSLXXXXXXXXXXYSKGTSKNTTRKGGIRGMLDSLNSHIAPGIVKNV 230 MGYVL A+GY+AGY+AILFQ ICIACGLYYAAELAEEYASATKR+I +S+ AVV +H LL ESFP+ +L GGIACH Y WL++DFP VE+FS KFL L ALCADHYIWFQYL RP + SA S+AIFFLLVWFVPFA+FVSLSVNDNVLPS+ SS YSS+SSDAMYYSDYS S YSKGTS+NT++KGGIRGMLD+LN+HIAPGI KNV Sbjct: 1 MGYVLAAVGYIAGYMAILFQTICIACGLYYAAELAEEYASATKRMIMWSISAVVGVHVLLYFESFPLLVLLGGIACHGAYAWLLMDFPKVEIFSYKFLLGLVALCADHYIWFQYLHGRPSIVPSALTSIAIFFLLVWFVPFAIFVSLSVNDNVLPSMTSSPQ--YSSSSSDAMYYSDYS----STRSLSMSDSGSYSKGTSRNTSKKGGIRGMLDTLNAHIAPGIAKNV 223
BLAST of NO18G01340 vs. NCBI_GenBank
Match: XP_005855982.1 (hypothetical protein NGA_0524700 [Nannochloropsis gaditana CCMP526] >EKU20391.1 hypothetical protein NGA_0524700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 183.7 bits (465), Expect = 6.300e-43 Identity = 90/129 (69.77%), Postives = 104/129 (80.62%), Query Frame = 0 Query: 1 MGYVLVAIGYVAGYLAILFQAICIACGLYYAAELAEEYASATKRIIAYSVLAVVALHGLLLVESFPIFLLAGGIACHAVYGWLIIDFPNVEVFSLKFLFALGALCADHYIWFQYLQSRPPTIKSAFQSM 130 MGYVL A+GY+AGY+AILFQ ICIACGLYYAAELAEEYASATKR+I +S+ AVV +H LL ESFP+ +L GGIACH Y WL++DFP VE+FS KFL L ALCADHYIWFQYL RP + SA S+ Sbjct: 1 MGYVLAAVGYIAGYMAILFQTICIACGLYYAAELAEEYASATKRMIMWSISAVVGVHVLLYFESFPLLVLLGGIACHGAYTWLLMDFPKVEIFSYKFLLGLVALCADHYIWFQYLHGRPSIVPSALTSI 129
BLAST of NO18G01340 vs. NCBI_GenBank
Match: XP_009032872.1 (hypothetical protein AURANDRAFT_6594, partial [Aureococcus anophagefferens] >EGB11794.1 hypothetical protein AURANDRAFT_6594, partial [Aureococcus anophagefferens]) HSP 1 Score: 137.9 bits (346), Expect = 4.000e-29 Identity = 67/145 (46.21%), Postives = 95/145 (65.52%), Query Frame = 0 Query: 11 VAGYLAILFQAICIACGLYYAAELAEEYASATKRIIAYSVLAVVALHGLLLVESFPIFLLAGGIACHAVYGWLIIDFPNVEVFSLKFLFALGALCADHYIWFQYLQSRPPTIKSAFQSMAIFFLLVWFVPFALFVSLSVNDNVLP 156 + GYLA+ +C++CGLYYAAELAEE++ T R++ Y+ AVVA H +L ++ +P+ +A G+ACHA Y WL+ D+P +E+ S FL ++ A HY WFQ+L S+ F L VW VPF+LF+SLS+NDN LP Sbjct: 4 LGGYLAVFGATLCLSCGLYYAAELAEEHSVLTGRLLGYATRAVVAAHAVLWLDGYPLRRVAAGVACHACYAWLLNDYPRLELSSPAFLASVAAFLGGHYSWFQHLADLSVEPLPFINSLGFFTLFVWLVPFSLFISLSINDNALP 148
BLAST of NO18G01340 vs. NCBI_GenBank
Match: XP_005835276.1 (hypothetical protein GUITHDRAFT_86075 [Guillardia theta CCMP2712] >EKX48296.1 hypothetical protein GUITHDRAFT_86075 [Guillardia theta CCMP2712]) HSP 1 Score: 126.3 bits (316), Expect = 1.200e-25 Identity = 78/160 (48.75%), Postives = 95/160 (59.38%), Query Frame = 0 Query: 10 YVAGYLAILFQAICIACGLYYAAELAEEYASATKRIIAYSVLAVVALHGLLLV-ESFPIFLLAGGIACHAVYGWLIIDFPNVEVFSLKFLFALGALCADHYIWFQYL----QSRPPTIKSAFQSMAIFFLLVWFVPFALFVSLSVNDNVLPSIGSSATSG 165 Y +GYL +LF AIC+ACGLYY AELAEEY+ TK+++ YS+ V+A+HGLLLV + FP F GIA H VY + DFP V S FL A L +H++W Y Q R P Q MA F VW VPF FVS+S+ D VLPS S G Sbjct: 8 YASGYLVLLFLAICMACGLYYMAELAEEYSRLTKKVLKYSIWVVLAIHGLLLVLDGFPFFTTMFGIALHVVYYQFLKDFPFVNFSSPLFLGACAGLLVNHWLWIVYFREQYQYRVP------QIMAFFVPCVWLVPFGFFVSVSLGDTVLPSATHSGGLG 161
BLAST of NO18G01340 vs. NCBI_GenBank
Match: XP_022839820.1 (Transmembrane adaptor Erv26 [Ostreococcus tauri] >CEF99403.1 Transmembrane adaptor Erv26 [Ostreococcus tauri]) HSP 1 Score: 114.8 bits (286), Expect = 3.600e-22 Identity = 64/156 (41.03%), Postives = 95/156 (60.90%), Query Frame = 0 Query: 1 MGYVLVAIGYVAGYLAILFQAICIACGLYYAAELAEEYASATKRIIAYSVLAVVALHGLLLV-ESFPIFLLAGGIACHAVYGWLIIDFPNVEVFSLKFLFALGALCADHYIWFQYLQSRPPTIKSAFQSMAIFFLLVWFVPFALFVSLSVNDNVLP 156 M +V A+ Y+ GYL ++F A+C+A GLYY AE+ EEY TKR++ YS+ A LH LLLV + P F LA Y ++ FP ++ S++FL +L AL A H++W ++ T S + FF++VWFVPF F+S++ N++VLP Sbjct: 1 MEFVSDALVYIGGYLFLVFVAVCLATGLYYLAEMVEEYTRLTKRVLDYSIKASYGLHALLLVFDRLPFFTLAISAGSQFAYSRMLRRFPFIDFTSVEFLGSLAALAASHWVWVRHFHG---TYHSTEYVLGFFFMIVWFVPFGFFISIAANESVLP 153
BLAST of NO18G01340 vs. NCBI_GenBank
Match: OAQ28798.1 (DUF396-domain-containing protein [Mortierella elongata AG-77]) HSP 1 Score: 113.2 bits (282), Expect = 1.100e-21 Identity = 66/157 (42.04%), Postives = 95/157 (60.51%), Query Frame = 0 Query: 2 GYVLVAIGYVAGYLAILFQAICIACGLYYAAELAEEYASATKRIIAYSVLAVVALHGLL-LVESFPIFLLAGGIACHAVYGWLIIDFPNVEVFSLKFLFALGALCADHYIWFQYLQSRPPTIKSAFQSMAIFF-LLVWFVPFALFVSLSVNDNVLPS 157 G L+ I Y+ +A +F + +ACGLYY AEL EEY TK+II L VV LH +L +V+ P + +ACHAVY + +FP + + S+ FL ++ + DH++WF+Y ++ +F S+A FF + VW VPF F+SLS NDN LPS Sbjct: 4 GVTLLLISYIGTAIAFVFATLSLACGLYYLAELVEEYTVLTKKIIKGLTLGVVGLHLMLWIVDGLPFTKILFSLACHAVYSTNLSNFPYISLVSIPFLSSVVLVLVDHFMWFKYFANK----YYSFMSIASFFGICVWLVPFTYFISLSANDNALPS 156
BLAST of NO18G01340 vs. NCBI_GenBank
Match: XP_021878568.1 (transmembrane adaptor Erv26-domain-containing protein [Lobosporangium transversale] >ORZ08785.1 transmembrane adaptor Erv26-domain-containing protein [Lobosporangium transversale]) HSP 1 Score: 113.2 bits (282), Expect = 1.100e-21 Identity = 68/161 (42.24%), Postives = 91/161 (56.52%), Query Frame = 0 Query: 2 GYVLVAIGYVAGYLAILFQAICIACGLYYAAELAEEYASATKRIIAYSVLAVVALH-GLLLVESFPIFLLAGGIACHAVYGWLIIDFPNVEVFSLKFLFALGALCADHYIWFQYLQSRPPTIKSAFQSMAIFF-LLVWFVPFALFVSLSVNDNVLPSIGSS 161 G+ I + LA LF + +ACGLYY AEL EEY TK+II + VV LH L L++ P + + CHAVY + + +FP + + S+ FL + + DH++WFQY T F S+A FF + VW VPFA F+SLS NDN LPS S Sbjct: 4 GFTFTLISFAGAVLAFLFTTLSLACGLYYMAELVEEYTVWTKKIIKGLTMVVVVLHISLWLLDGLPFTKILFSLGCHAVYSFNLTNFPFISLTSVPFLLSCVLVLVDHFMWFQYFSRHYHT----FASIASFFGICVWMVPFAYFISLSANDNALPSFDKS 160
BLAST of NO18G01340 vs. NCBI_GenBank
Match: EXX52911.1 (Svp26p [Rhizophagus irregularis DAOM 197198w] >GBC41037.1 transmembrane adaptor erv26-like protein [Rhizophagus irregularis DAOM 181602] >PKC18033.1 transmembrane adaptor Erv26 [Rhizophagus irregularis] >PKC71938.1 transmembrane adaptor Erv26 [Rhizophagus irregularis] >PKY15453.1 transmembrane adaptor Erv26 [Rhizophagus irregularis] >PKY42556.1 transmembrane adaptor Erv26 [Rhizophagus irregularis] >POG63532.1 hypothetical protein GLOIN_2v1685259 [Rhizophagus irregularis DAOM 181602=DAOM 197198]) HSP 1 Score: 112.1 bits (279), Expect = 2.300e-21 Identity = 69/155 (44.52%), Postives = 92/155 (59.35%), Query Frame = 0 Query: 4 VLVAIGYVAGYLAILFQAICIACGLYYAAELAEEYASATKRIIAYSVLAVVALHGLL-LVESFPIFLLAGGIACHAVYGWLIIDFPNVEVFSLKFLFALGALCADHYIWFQYLQSRPPTIKSAFQSMAIFF-LLVWFVPFALFVSLSVNDNVLPS 157 +L + Y A LA LF + +ACGLYY AEL EEY T++II L VV +H LL L +SFP + + I CH VY + FP + + SL F+ + + ADH++WFQY SR F +A FF + VW +PF+ F+SLS NDN LPS Sbjct: 3 LLHLLSYGAAVLAFLFLTLSLACGLYYLAELVEEYTVLTRKIIKNVTLMVVVIHVLLWLFDSFPFWRILFSIMCHGVYTMNLETFPFINLTSLPFIASCVLVIADHFLWFQYFTSR----YFVFVDVAAFFGICVWLIPFSYFISLSANDNALPS 153
BLAST of NO18G01340 vs. NCBI_GenBank
Match: GAQ92289.1 (hypothetical protein KFL_009680010 [Klebsormidium nitens]) HSP 1 Score: 111.3 bits (277), Expect = 4.000e-21 Identity = 69/183 (37.70%), Postives = 104/183 (56.83%), Query Frame = 0 Query: 8 IGYVAGYLAILFQAICIACGLYYAAELAEEYASATKRIIAYSVLAVVALH-GLLLVESFPIFLLAGGIACHAVYGWLIIDFPNVEVFSLKFLFALGALCADHYIWFQYL--QSRPPTIKSAFQSMAIFFLLVWFVPFALFVSLSVNDNVLPSIGSSATS--GYSSTSSDAMYYSDYSTASGSL 186 I YV GYL ++F A+C+A GLYY AEL EEY TKR+I ++ V+ +H LLL + P+ +A GI H VY L+ FP + + S FL ++G + H +WF++ + P + + + F ++VW +PFA F+SL+ N++VLP G S GY+ SD Y + G+L Sbjct: 8 IVYVGGYLFLVFFAVCLATGLYYIAELVEEYTRLTKRVIGTAIKVVIGIHVALLLWDRLPVLPIAVGIGSHVVYYRLLKTFPYISLTSPDFLGSVGLVVLSHIVWFRFFAYDYQRPYLTLEY-VIGFFLIMVWLIPFAYFISLAANESVLPGAGGPGASYGGYTRQESDPTYMGGGKRSRGTL 189
BLAST of NO18G01340 vs. NCBI_GenBank
Match: KFH73033.1 (hypothetical protein MVEG_00258 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 110.9 bits (276), Expect = 5.200e-21 Identity = 68/161 (42.24%), Postives = 91/161 (56.52%), Query Frame = 0 Query: 5 LVAIGYVAGYLAILFQAICIACGLYYAAELAEEYASATKRIIAYSVLAVVALH-GLLLVESFPIFLLAGGIACHAVYGWLIIDFPNVEVFSLKFLFALGALCADHYIWFQYLQSRPPTIKSAFQSMAIFF-LLVWFVPFALFVSLSVNDNVLPSIGSSATS 164 L I Y +A LF + +ACGLYY AEL EEY TK+II +AV LH L L++ FP + + CHAVY + FP + + SL FL + + DH++WFQ+ R +F S+A FF + VW +PFA F+SLS NDN LPS + S Sbjct: 7 LTLISYAGTGIAFLFSTLSLACGLYYLAELVEEYTVLTKKIIKGLTVAVAVLHLALWLLDGFPFSKILFSLFCHAVYSLNLGKFPYISLLSLPFLASCALVLCDHFMWFQFFTRR----YYSFMSIASFFGICVWMIPFAYFISLSANDNALPSFDKTEQS 163 The following BLAST results are available for this feature:
BLAST of NO18G01340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G01340 ID=NO18G01340|Name=NO18G01340|organism=Nannochloropsis oceanica|type=gene|length=1540bpback to top protein sequence of NO18G01340.1 >NO18G01340.1-protein ID=NO18G01340.1-protein|Name=NO18G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=230bpback to top Synonyms
Publications
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