NO18G01250, NO18G01250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G01250 vs. NCBI_GenBank
Match: EWM28918.1 (Protein of unknown function DUF3593 [Nannochloropsis gaditana]) HSP 1 Score: 219.5 bits (558), Expect = 8.300e-54 Identity = 107/129 (82.95%), Postives = 118/129 (91.47%), Query Frame = 0 Query: 54 GDWLETAGTYTLNWLKEVNYGAVFASSLFPYLWFLKNIWADDFPIPKTMKWGFASLLIFVISTIIGGIAAKLIYDELLANIDYIHGVAESLLGVTNIVLAIAAFRALEAAKKDRGGERPERWTEDGGVD 183 GD LE AGT+TL+WL VNYGAVFA SLFPYL FLKNIW +D+PIPKTMKWGFASLLIFV+STIIGGIAAKLIY+++LAN+DYIHGVAESLLGVTNIVLAIAAFRALEAAKKDR GERP WTE+G +D Sbjct: 112 GDLLEAAGTFTLDWLNNVNYGAVFALSLFPYLIFLKNIWPEDYPIPKTMKWGFASLLIFVVSTIIGGIAAKLIYNDVLANVDYIHGVAESLLGVTNIVLAIAAFRALEAAKKDRNGERPSVWTENGDLD 240
BLAST of NO18G01250 vs. NCBI_GenBank
Match: XP_005853976.1 (hypothetical protein NGA_0502100 [Nannochloropsis gaditana CCMP526] >EKU22384.1 hypothetical protein NGA_0502100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 205.7 bits (522), Expect = 1.200e-49 Identity = 119/219 (54.34%), Postives = 138/219 (63.01%), Query Frame = 0 Query: 16 SIISLKATLPDFDLIQSTTTGVLSLLSSP----PSVLLAGQ----DGDWLETAGTYTLNWLKEVNYGAVFASSLFPYLWFLKNIWADDFPIPK--------------------------------------------TMKWGFASLLIFVISTIIGGIAAKLIYDELLANIDYIHGVAESLLGVTNIVLAIAAFRALEAAKKDRGGERPERWTEDGGVD 183 + ++L A L D + + T +L L S P PS++ Q GD LE AGT+TL+WL VNYGAVFA SLFPYL FLKNIW +D+PIPK TMKWGFASLLIFV+STIIGGIAAKLIY+++LAN+DYIHGVAESLLGVTNIVLAIAAFRALEAAKKDR GERP WTE+G +D Sbjct: 81 AFVALSAGLVDTETARGAITSLLPLSSPPAAAMPSLVAIAQGTEGKGDLLEAAGTFTLDWLNNVNYGAVFALSLFPYLIFLKNIWPEDYPIPKVGGGCPKLLLFEHSRERATRSIASSAWRTSTDFRFPAPSSPSPQTMKWGFASLLIFVVSTIIGGIAAKLIYNDVLANVDYIHGVAESLLGVTNIVLAIAAFRALEAAKKDRNGERPSVWTENGDLD 299
BLAST of NO18G01250 vs. NCBI_GenBank
Match: CBN78626.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 80.9 bits (198), Expect = 4.600e-12 Identity = 43/95 (45.26%), Postives = 63/95 (66.32%), Query Frame = 0 Query: 76 VFASSLFPYLWFLKNIWADDFPIPKTMKWGFASLLIFVISTIIGGIAAKLIYDELLANIDYIHGVAESLLGVTNIVLAIAAFRALEAAKKDRGGE 171 +F +SLFPYL FL + + P+ +GFA LL+FV++TI GI AK Y+E+LAN+DY+HG+AES L +TN+ + A +A+ + GGE Sbjct: 42 LFQASLFPYLAFLWLLSRKETKTPEGGTFGFAFLLVFVVATIPAGIYAKTEYNEILANVDYLHGIAESFLTLTNLFIVSAFRKAVVGKQPAAGGE 136
BLAST of NO18G01250 vs. NCBI_GenBank
Match: XP_005714398.1 (unnamed protein product [Chondrus crispus] >CDF34579.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 80.5 bits (197), Expect = 6.000e-12 Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 0 Query: 77 FASSLFPYLWFLKNIWADDFPIPKTMKWGFASLLIFVISTIIGGIAAKLIYDELLANIDYIHGVAESLLGVTNIVLAI 155 FA+SLFPYL FL + D+ PK +GF LL+FV +TI GI AK+ Y ++LANID++HG AESLL +TN+++ + Sbjct: 61 FAASLFPYLGFLYYLGRDEVKCPKLANFGFRFLLVFVFATIPAGIYAKVHYHDILANIDWLHGGAESLLTITNLLIVL 138
BLAST of NO18G01250 vs. NCBI_GenBank
Match: XP_007514713.1 (predicted protein [Bathycoccus prasinos] >CCO14953.1 predicted protein [Bathycoccus prasinos]) HSP 1 Score: 79.3 bits (194), Expect = 1.300e-11 Identity = 40/90 (44.44%), Postives = 61/90 (67.78%), Query Frame = 0 Query: 76 VFASSLFPYLWFLKNIWADDFPIPKTMKWGFASLLIFVISTIIGGIAAKLIYDELLANIDYIHGVAESLLGVTNIVLAIAAFRALEAAKK 166 +FA+SLFPYL+FL + + PK +GF LL+FV +TI GI AK+ Y ++LAN+D++HG AESLL +TN+++ + L A++ Sbjct: 125 LFAASLFPYLFFLFFLGKPETAFPKRALFGFKFLLVFVFATIPAGIYAKVHYSDILANVDWLHGGAESLLTITNLLIVLGMREGLRDAER 214
BLAST of NO18G01250 vs. NCBI_GenBank
Match: CEM23009.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 78.2 bits (191), Expect = 3.000e-11 Identity = 42/87 (48.28%), Postives = 59/87 (67.82%), Query Frame = 0 Query: 74 GAVFASSLFPYLWFLKNIWADDFPIPKTMKWGFASLLIFVISTIIGGIAAKLIYDELLANIDYIHGVAESLLGVTNIVLAIAAFRAL 161 G +FA+SLFPYL FL + + +P+ +GF LL+FV TI GI AK+ Y+E LAN+DY+HG AES L VTN+++ I +A+ Sbjct: 22 GQLFAASLFPYLAFLWFLSRPETRMPRLANFGFQFLLVFVGMTIPAGILAKVWYNEKLANVDYLHGGAESFLTVTNLLIVIGMRQAI 108
BLAST of NO18G01250 vs. NCBI_GenBank
Match: WP_019498158.1 (DUF3593 domain-containing protein [Pseudanabaena sp. PCC 6802]) HSP 1 Score: 76.6 bits (187), Expect = 8.700e-11 Identity = 44/91 (48.35%), Postives = 57/91 (62.64%), Query Frame = 0 Query: 75 AVFASSLFPYLWFLKNIWADDFPIPKTMKWGFASLLIFVISTIIGGIAAKLIYDELLANIDYIHGVAESLLGVTNIVLAIAAFRALEAAKK 166 A+FA SLFPYL FL I +PK WGF L+FV TI GI AKL+Y E LAN+D++HG AESLL + NI++ + A + +K Sbjct: 6 ALFALSLFPYLAFLWFITRSG-KMPKLALWGFYGTLVFVAVTIPVGIYAKLVYKESLANVDFLHGGAESLLTIANILIVLGFKNASDRLRK 95
BLAST of NO18G01250 vs. NCBI_GenBank
Match: GAX14921.1 (hypothetical protein FisN_12Lh381 [Fistulifera solaris]) HSP 1 Score: 76.3 bits (186), Expect = 1.100e-10 Identity = 53/131 (40.46%), Postives = 71/131 (54.20%), Query Frame = 0 Query: 46 SVLLAGQDGDWLETAGTYTLNWLKEVNYGAVFASSLFPYLWFLKNIWADDFPIPKTMKWGFASLLIFVISTIIGGIAAKLIYDELLANIDYIHGVAESLLGVTNIVLAIAAFRALEAAKKDRGGERPERWT 177 + LLA D D E G F +SLFPYL FL + + PK + GFA+ L+FV TI IAAK++Y LA+ D++HG AESLL +TN+V IA +AL A K++G P+ T Sbjct: 59 TTLLANMDADTAEALA------------GPFFGASLFPYLAFLYFLDRPENETPKGVTVGFATCLLFVFLTIPAAIAAKVLYGVSLADSDWLHGSAESLLTMTNLVTVIAFRQALRA--KEQGLPPPQSAT 175
BLAST of NO18G01250 vs. NCBI_GenBank
Match: XP_002504984.1 (predicted protein [Micromonas commoda] >ACO66242.1 predicted protein [Micromonas commoda]) HSP 1 Score: 75.1 bits (183), Expect = 2.500e-10 Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 0 Query: 70 EVNYGAVFASSLFPYLWFLKNIWADDFPIPKTMKWGFASLLIFVISTIIGGIAAKLIYDELLANIDYIHGVAESLLGVTNIVLAIAAFRALEAAK 165 E+ G +F +SL PYL FL + + +P +GF LL+FV TI I AKL+Y+++LAN+D++HG AESLL +TN+++ I L K Sbjct: 88 ELIEGNLFGASLLPYLVFLYYLGMPESKMPPRALFGFKFLLVFVFGTIPCAIYAKLVYNDILANVDWLHGPAESLLTITNLLIVIGLREGLRDLK 182
BLAST of NO18G01250 vs. NCBI_GenBank
Match: EJK60591.1 (hypothetical protein THAOC_19021 [Thalassiosira oceanica]) HSP 1 Score: 74.7 bits (182), Expect = 3.300e-10 Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = 0 Query: 74 GAVFASSLFPYLWFLKNIWADDFPIPKTMKWGFASLLIFVISTIIGGIAAKLIYDELLANIDYIHGVAESLLGVTNIVLAIAAFRAL 161 G F SLFPYL FL + D+ PK + GFA+ L+FV TI IAAKL+Y LA+ D++HG AESLL +TN+V +A +AL Sbjct: 11 GPFFGLSLFPYLGFLYLLNVDENNTPKGVVVGFATCLLFVFLTIPAAIAAKLLYGVSLADSDWLHGSAESLLTITNLVTVVAFRQAL 97 The following BLAST results are available for this feature:
BLAST of NO18G01250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G01250 ID=NO18G01250|Name=NO18G01250|organism=Nannochloropsis oceanica|type=gene|length=1577bpback to top protein sequence of NO18G01250.1 >NO18G01250.1-protein ID=NO18G01250.1-protein|Name=NO18G01250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=184bpback to top Synonyms
Publications
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