NO18G01210, NO18G01210 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO18G01210
Unique Name	NO18G01210
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2308
Alignment location	chr18:421042..423349 -

Link to JBrowse

Properties


Property Name	Value
Description	casein kinase 1

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr18	genome	chr18:421042..423349 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006468	protein phosphorylation

Vocabulary: **Molecular Function**
Term	Definition
GO:0004672	protein kinase activity
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom
IPR000719	Prot_kinase_dom

Homology

[Close]

BLAST of NO18G01210 vs. NCBI_GenBank
Match: XP_005855981.1 (casein kinase I HRR25-like protein [Nannochloropsis gaditana CCMP526] >EKU20390.1 casein kinase I HRR25-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 641.0 bits (1652), Expect = 3.200e-180
Identity = 372/483 (77.02%), Postives = 388/483 (80.33%), Query Frame = 0

Query:   17 EDQPLYPQAAQQLDLPHGLVSGLIGTTGGAQSSNRRAQAGQTSLSAQYAGGILPIPGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDLRVNKKYRLSRKIGSGSFGDIYLGVNVTTGEEVAIKLESVKTKHPQLLYESKIYRILYGGVGIPNVRWFGVEGDYNVMVLDLLGPSLEDLFNYCGRRFNLKTVLLLAQQLLSRLEFLHTKSFIHRDVKPDNFLIGLGRHHNTVYIIDFGLAKRYRDPRTHKHIAYREHKNLTGTARYASINTHIGIEQSRRDDLESLGYVIMYFLRGSLPWQGLKANTKKQKYERILERKMATSPEQLCKGFPSEFRSYFEYCRALRFDDRPDYSYLKRLFSELFLRKAFTDDAMFDWTILNMQXXXXXXXXXXXXXXXXXXXXXXXEMGEGGKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVRLDGKXXXXXEEVQDGGLAAGMGRRRGILSRQDDPT 500
            +DQP+YPQAAQQLDLPHGLVSGL+   G + S   + QA   + S+Q+AG               XXXXXXXXXXXXXXXXXX      MDLRVNKKYRLSRKIGSGSFGDIYLGVNVTTGEEVAIKLESVKTKHPQLLYESKIYRILYGGVGIPNVRWFGVEGDYNVMVLDLLGPSLEDLFNYCGRRFNLKTVLLLAQQLLSRLEFLHTKSFIHRDVKPDNFLIGLGRHHNTVYIIDFGLAKRYRDPRTHKHI YREHKNLTGTARYASINTHIGIEQSRRDDLESLGYV+MYFLRGSLPWQGLKA+TKKQKYERILERKMATSPEQLCKGFPSEFRSYFEYCRALRFDDRPDYSYLKRLFSELFLRK F DDAMFDWTILNMQ       XXXXXXXXXXXXXXXX      + E                             + LD +       V+   +   +GRRRGILSRQDDPT
Sbjct:   28 QDQPVYPQAAQQLDLPHGLVSGLL---GASDSRPLQTQALAPASSSQHAGAAPTSGARRVGVPSGXXXXXXXXXXXXXXXXXXGTRKAGMDLRVNKKYRLSRKIGSGSFGDIYLGVNVTTGEEVAIKLESVKTKHPQLLYESKIYRILYGGVGIPNVRWFGVEGDYNVMVLDLLGPSLEDLFNYCGRRFNLKTVLLLAQQLLSRLEFLHTKSFIHRDVKPDNFLIGLGRHHNTVYIIDFGLAKRYRDPRTHKHIIYREHKNLTGTARYASINTHIGIEQSRRDDLESLGYVVMYFLRGSLPWQGLKAHTKKQKYERILERKMATSPEQLCKGFPSEFRSYFEYCRALRFDDRPDYSYLKRLFSELFLRKGFADDAMFDWTILNMQ---QERSXXXXXXXXXXXXXXXXXXXXAMRKEQDGRAMDTGAMGEAGCKVGEDVAREKGGAIGLDSRG------VERAEIGVALGRRRGILSRQDDPT 498

[Close]

BLAST of NO18G01210 vs. NCBI_GenBank
Match: EWM23331.1 (Protein kinase, ATP binding site [Nannochloropsis gaditana])

HSP 1 Score: 607.4 bits (1565), Expect = 3.900e-170
Identity = 325/394 (82.49%), Postives = 333/394 (84.52%), Query Frame = 0

Query:  106 MDLRVNKKYRLSRKIGSGSFGDIYLGVNVTTGEEVAIKLESVKTKHPQLLYESKIYRILYGGVGIPNVRWFGVEGDYNVMVLDLLGPSLEDLFNYCGRRFNLKTVLLLAQQLLSRLEFLHTKSFIHRDVKPDNFLIGLGRHHNTVYIIDFGLAKRYRDPRTHKHIAYREHKNLTGTARYASINTHIGIEQSRRDDLESLGYVIMYFLRGSLPWQGLKANTKKQKYERILERKMATSPEQLCKGFPSEFRSYFEYCRALRFDDRPDYSYLKRLFSELFLRKAFTDDAMFDWTILNMQXXXXXXXXXXXXXXXXXXXXXXXEMGEGGKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVRLDGKXXXXXEEVQDGGLAAGMGRRRGILSRQDDPT 500
            MDLRVNKKYRLSRKIGSGSFGDIYLGVNVTTGEEVAIKLESVKTKHPQLLYESKIYRILYGGVGIPNVRWFGVEGDYNVMVLDLLGPSLEDLFNYCGRRFNLKTVLLLAQQLLSRLEFLHTKSFIHRDVKPDNFLIGLGRHHNTVYIIDFGLAKRYRDPRTHKHI YREHKNLTGTARYASINTHIGIEQSRRDDLESLGYV+MYFLRGSLPWQGLKA+TKKQKYERILERKMATSPEQLCKGFPSEFRSYFEYCRALRFDDRPDYSYLKRLFSELFLRK F DDAMFDWTILNMQ       XXXXXXXXXXXXXXXX      + E                             + LD +       V+   +   +GRRRGILSRQDDPT
Sbjct:    1 MDLRVNKKYRLSRKIGSGSFGDIYLGVNVTTGEEVAIKLESVKTKHPQLLYESKIYRILYGGVGIPNVRWFGVEGDYNVMVLDLLGPSLEDLFNYCGRRFNLKTVLLLAQQLLSRLEFLHTKSFIHRDVKPDNFLIGLGRHHNTVYIIDFGLAKRYRDPRTHKHIIYREHKNLTGTARYASINTHIGIEQSRRDDLESLGYVVMYFLRGSLPWQGLKAHTKKQKYERILERKMATSPEQLCKGFPSEFRSYFEYCRALRFDDRPDYSYLKRLFSELFLRKGFADDAMFDWTILNMQ---QERSXXXXXXXXXXXXXXXXXXXGAMRKEQDGRAMDTGAMGEAGCKVGEDVAREKGGAIGLDSRG------VEGAEIGVALGRRRGILSRQDDPT 385

[Close]

BLAST of NO18G01210 vs. NCBI_GenBank
Match: CBJ25928.1 (Casein kinase (serine/threonine/tyrosine protein kinase) [Ectocarpus siliculosus])

HSP 1 Score: 539.7 bits (1389), Expect = 9.900e-150
Identity = 252/296 (85.14%), Postives = 278/296 (93.92%), Query Frame = 0

Query:  106 MDLRVNKKYRLSRKIGSGSFGDIYLGVNVTTGEEVAIKLESVKTKHPQLLYESKIYRILYGGVGIPNVRWFGVEGDYNVMVLDLLGPSLEDLFNYCGRRFNLKTVLLLAQQLLSRLEFLHTKSFIHRDVKPDNFLIGLGRHHNTVYIIDFGLAKRYRDPRTHKHIAYREHKNLTGTARYASINTHIGIEQSRRDDLESLGYVIMYFLRGSLPWQGLKANTKKQKYERILERKMATSPEQLCKGFPSEFRSYFEYCRALRFDDRPDYSYLKRLFSELFLRKAFTDDAMFDWTILNMQ 402
            M+LRV KKYRL RKIGSGSFGDIYLG N+TTGEEVAIKLES KTKHPQLLYESKIYRIL+GG+GIP VRW+GVEGDYNVMVLDLLGPSLEDLFNYC RRFNLKTVL+LA QLLSRLE++HTKSFIHRDVKPDNFLIGLG+  N ++IIDFGLAK+YRDPRTH+HI YR++KNLTGTARYASINTHIGIEQSRRDDLESLGYV+MYF+RGSLPWQGLKANTKKQKYERI++RKM+TS EQLCKG+PSEFRSYFEYCR+LRF+DRPDY+YLKRLF ELF RK F  D MFDWT+LN+Q
Sbjct:  105 MELRVGKKYRLGRKIGSGSFGDIYLGTNMTTGEEVAIKLESTKTKHPQLLYESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCSRRFNLKTVLMLADQLLSRLEYVHTKSFIHRDVKPDNFLIGLGKRQNIIHIIDFGLAKKYRDPRTHQHIPYRDNKNLTGTARYASINTHIGIEQSRRDDLESLGYVLMYFIRGSLPWQGLKANTKKQKYERIMDRKMSTSTEQLCKGYPSEFRSYFEYCRSLRFEDRPDYAYLKRLFKELFYRKGFQYDNMFDWTVLNLQ 400

[Close]

BLAST of NO18G01210 vs. NCBI_GenBank
Match: GAX20902.1 (casein kinase 1, epsilon [Fistulifera solaris])

HSP 1 Score: 538.9 bits (1387), Expect = 1.700e-149
Identity = 250/296 (84.46%), Postives = 280/296 (94.59%), Query Frame = 0

Query:  106 MDLRVNKKYRLSRKIGSGSFGDIYLGVNVTTGEEVAIKLESVKTKHPQLLYESKIYRILYGGVGIPNVRWFGVEGDYNVMVLDLLGPSLEDLFNYCGRRFNLKTVLLLAQQLLSRLEFLHTKSFIHRDVKPDNFLIGLGRHHNTVYIIDFGLAKRYRDPRTHKHIAYREHKNLTGTARYASINTHIGIEQSRRDDLESLGYVIMYFLRGSLPWQGLKANTKKQKYERILERKMATSPEQLCKGFPSEFRSYFEYCRALRFDDRPDYSYLKRLFSELFLRKAFTDDAMFDWTILNMQ 402
            M+LRV KKYRL RKIGSGSFGDIYLG N+TTGEEVAIKLESVKTKHPQLLYESKIYRIL+GG+GIPNVRW+G+EGDYNVMVLDLLGPSLEDLFNYCGRRF LKTVL+LA QLLSRLE++HTKSFIHRDVKPDNFLIGLG+  + ++IIDFGLAK+YRDPR+H+HI YRE+KNLTGTARYASINTHIGIEQSRRDDLESLGYV+MYF+RGSLPWQGLKANTKKQKYERI++RKM+TS EQLCKG+P+EFRSYFEYCR+LRF+DRPDY+YLKRLF ELF RK F  D +FDWT+LN+Q
Sbjct:    1 MELRVGKKYRLGRKIGSGSFGDIYLGTNMTTGEEVAIKLESVKTKHPQLLYESKIYRILHGGLGIPNVRWYGIEGDYNVMVLDLLGPSLEDLFNYCGRRFQLKTVLMLADQLLSRLEYVHTKSFIHRDVKPDNFLIGLGKRQSVIHIIDFGLAKKYRDPRSHQHIPYRENKNLTGTARYASINTHIGIEQSRRDDLESLGYVLMYFIRGSLPWQGLKANTKKQKYERIMDRKMSTSTEQLCKGYPTEFRSYFEYCRSLRFEDRPDYAYLKRLFKELFYRKGFQYDNLFDWTVLNLQ 296

[Close]

BLAST of NO18G01210 vs. NCBI_GenBank
Match: GAX16507.1 (casein kinase 1, epsilon [Fistulifera solaris])

HSP 1 Score: 538.9 bits (1387), Expect = 1.700e-149
Identity = 250/296 (84.46%), Postives = 280/296 (94.59%), Query Frame = 0

Query:  106 MDLRVNKKYRLSRKIGSGSFGDIYLGVNVTTGEEVAIKLESVKTKHPQLLYESKIYRILYGGVGIPNVRWFGVEGDYNVMVLDLLGPSLEDLFNYCGRRFNLKTVLLLAQQLLSRLEFLHTKSFIHRDVKPDNFLIGLGRHHNTVYIIDFGLAKRYRDPRTHKHIAYREHKNLTGTARYASINTHIGIEQSRRDDLESLGYVIMYFLRGSLPWQGLKANTKKQKYERILERKMATSPEQLCKGFPSEFRSYFEYCRALRFDDRPDYSYLKRLFSELFLRKAFTDDAMFDWTILNMQ 402
            M+LRV KKYRL RKIGSGSFGDIYLG N+TTGEEVAIKLESVKTKHPQLLYESKIYRIL+GG+GIPNVRW+G+EGDYNVMVLDLLGPSLEDLFNYCGRRF LKTVL+LA QLLSRLE++HTKSFIHRDVKPDNFLIGLG+  + ++IIDFGLAK+YRDPR+H+HI YRE+KNLTGTARYASINTHIGIEQSRRDDLESLGYV+MYF+RGSLPWQGLKANTKKQKYERI++RKM+TS EQLCKG+P+EFRSYFEYCR+LRF+DRPDY+YLKRLF ELF RK F  D +FDWT+LN+Q
Sbjct:    1 MELRVGKKYRLGRKIGSGSFGDIYLGTNMTTGEEVAIKLESVKTKHPQLLYESKIYRILHGGLGIPNVRWYGIEGDYNVMVLDLLGPSLEDLFNYCGRRFQLKTVLMLADQLLSRLEYVHTKSFIHRDVKPDNFLIGLGKRQSVIHIIDFGLAKKYRDPRSHQHIPYRENKNLTGTARYASINTHIGIEQSRRDDLESLGYVLMYFIRGSLPWQGLKANTKKQKYERIMDRKMSTSTEQLCKGYPTEFRSYFEYCRSLRFEDRPDYAYLKRLFKELFYRKGFQYDNLFDWTVLNLQ 296

[Close]

BLAST of NO18G01210 vs. NCBI_GenBank
Match: XP_002184539.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43938.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 537.0 bits (1382), Expect = 6.400e-149
Identity = 250/296 (84.46%), Postives = 279/296 (94.26%), Query Frame = 0

Query:  106 MDLRVNKKYRLSRKIGSGSFGDIYLGVNVTTGEEVAIKLESVKTKHPQLLYESKIYRILYGGVGIPNVRWFGVEGDYNVMVLDLLGPSLEDLFNYCGRRFNLKTVLLLAQQLLSRLEFLHTKSFIHRDVKPDNFLIGLGRHHNTVYIIDFGLAKRYRDPRTHKHIAYREHKNLTGTARYASINTHIGIEQSRRDDLESLGYVIMYFLRGSLPWQGLKANTKKQKYERILERKMATSPEQLCKGFPSEFRSYFEYCRALRFDDRPDYSYLKRLFSELFLRKAFTDDAMFDWTILNMQ 402
            M+LRV KKYRL RKIGSGSFGDIYLG N+TTGEEVAIKLESVKTKHPQLLYESKIYRIL+GG+GIPNVRW+G+EGDYNVMVLDLLGPSLEDLFNYCGRRF LKTVL+LA QLLSRLE++HTKSFIHRDVKPDNFLIGLG+  + ++IIDFGLAK+YRDPR+H+HI YRE+KNLTGTARYASINTHIGIEQSRRDDLESLGYV+MYF+RGSLPWQGLKANTKKQKYERI++RKM+TS EQLCKG+ +EFRSYFEYCR+LRF+DRPDY+YLKRLF ELF RK F  D MFDWT+LN+Q
Sbjct:    1 MELRVGKKYRLGRKIGSGSFGDIYLGTNMTTGEEVAIKLESVKTKHPQLLYESKIYRILHGGLGIPNVRWYGIEGDYNVMVLDLLGPSLEDLFNYCGRRFQLKTVLMLADQLLSRLEYVHTKSFIHRDVKPDNFLIGLGKRQSVIHIIDFGLAKKYRDPRSHQHIPYRENKNLTGTARYASINTHIGIEQSRRDDLESLGYVLMYFIRGSLPWQGLKANTKKQKYERIMDRKMSTSTEQLCKGYATEFRSYFEYCRSLRFEDRPDYAYLKRLFKELFYRKGFQYDNMFDWTVLNLQ 296

[Close]

BLAST of NO18G01210 vs. NCBI_GenBank
Match: XP_002182304.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46205.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 537.0 bits (1382), Expect = 6.400e-149
Identity = 250/296 (84.46%), Postives = 279/296 (94.26%), Query Frame = 0

Query:  106 MDLRVNKKYRLSRKIGSGSFGDIYLGVNVTTGEEVAIKLESVKTKHPQLLYESKIYRILYGGVGIPNVRWFGVEGDYNVMVLDLLGPSLEDLFNYCGRRFNLKTVLLLAQQLLSRLEFLHTKSFIHRDVKPDNFLIGLGRHHNTVYIIDFGLAKRYRDPRTHKHIAYREHKNLTGTARYASINTHIGIEQSRRDDLESLGYVIMYFLRGSLPWQGLKANTKKQKYERILERKMATSPEQLCKGFPSEFRSYFEYCRALRFDDRPDYSYLKRLFSELFLRKAFTDDAMFDWTILNMQ 402
            M+LRV KKYRL RKIGSGSFGDIYLG N+TTGEEVAIKLESVKTKHPQLLYESKIYRIL+GG+GIPNVRW+G+EGDYNVMVLDLLGPSLEDLFNYCGRRF LKTVL+LA QLLSRLE++HTKSFIHRDVKPDNFLIGLG+  + ++IIDFGLAK+YRDPR+H+HI YRE+KNLTGTARYASINTHIGIEQSRRDDLESLGYV+MYF+RGSLPWQGLKANTKKQKYERI++RKM+TS EQLCKG+ +EFRSYFEYCR+LRF+DRPDY+YLKRLF ELF RK F  D MFDWT+LN+Q
Sbjct:    1 MELRVGKKYRLGRKIGSGSFGDIYLGTNMTTGEEVAIKLESVKTKHPQLLYESKIYRILHGGLGIPNVRWYGIEGDYNVMVLDLLGPSLEDLFNYCGRRFQLKTVLMLADQLLSRLEYVHTKSFIHRDVKPDNFLIGLGKRQSVIHIIDFGLAKKYRDPRSHQHIPYRENKNLTGTARYASINTHIGIEQSRRDDLESLGYVLMYFIRGSLPWQGLKANTKKQKYERIMDRKMSTSTEQLCKGYATEFRSYFEYCRSLRFEDRPDYAYLKRLFKELFYRKGFQYDNMFDWTVLNLQ 296

[Close]

BLAST of NO18G01210 vs. NCBI_GenBank
Match: OEU16070.1 (kinase-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 537.0 bits (1382), Expect = 6.400e-149
Identity = 250/296 (84.46%), Postives = 279/296 (94.26%), Query Frame = 0

Query:  106 MDLRVNKKYRLSRKIGSGSFGDIYLGVNVTTGEEVAIKLESVKTKHPQLLYESKIYRILYGGVGIPNVRWFGVEGDYNVMVLDLLGPSLEDLFNYCGRRFNLKTVLLLAQQLLSRLEFLHTKSFIHRDVKPDNFLIGLGRHHNTVYIIDFGLAKRYRDPRTHKHIAYREHKNLTGTARYASINTHIGIEQSRRDDLESLGYVIMYFLRGSLPWQGLKANTKKQKYERILERKMATSPEQLCKGFPSEFRSYFEYCRALRFDDRPDYSYLKRLFSELFLRKAFTDDAMFDWTILNMQ 402
            M+LRV KKYRL RKIGSGSFGDIYLG N+TTGEEVAIKLESVKTKHPQLLYESKIYRIL+GG+GIPNVRW+G+EGDYNVMVLDLLGPSLEDLFNYCGRRF LKTVL+LA QLLSRLE++HTKSFIHRDVKPDNFLIGLG+  + ++IIDFGLAK+YRDPR+H+HI YRE+KNLTGTARYASINTHIGIEQSRRDDLESLGYV+MYF+RGSLPWQGLKANTKKQKYERI++RKM+TS EQLCKG+ +EFRSYFEYCR+LRF+DRPDY+YLKRLF ELF RK F  D MFDWT+LN+Q
Sbjct:    1 MELRVGKKYRLGRKIGSGSFGDIYLGTNMTTGEEVAIKLESVKTKHPQLLYESKIYRILHGGLGIPNVRWYGIEGDYNVMVLDLLGPSLEDLFNYCGRRFQLKTVLMLADQLLSRLEYVHTKSFIHRDVKPDNFLIGLGKRQSVIHIIDFGLAKKYRDPRSHQHIPYRENKNLTGTARYASINTHIGIEQSRRDDLESLGYVLMYFIRGSLPWQGLKANTKKQKYERIMDRKMSTSTEQLCKGYATEFRSYFEYCRSLRFEDRPDYAYLKRLFKELFYRKGFQYDNMFDWTVLNLQ 296

[Close]

BLAST of NO18G01210 vs. NCBI_GenBank
Match: XP_002295127.1 (hypothetical protein THAPSDRAFT_14638, partial [Thalassiosira pseudonana CCMP1335] >EED87431.1 hypothetical protein THAPSDRAFT_14638, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 535.4 bits (1378), Expect = 1.900e-148
Identity = 249/296 (84.12%), Postives = 278/296 (93.92%), Query Frame = 0

Query:  106 MDLRVNKKYRLSRKIGSGSFGDIYLGVNVTTGEEVAIKLESVKTKHPQLLYESKIYRILYGGVGIPNVRWFGVEGDYNVMVLDLLGPSLEDLFNYCGRRFNLKTVLLLAQQLLSRLEFLHTKSFIHRDVKPDNFLIGLGRHHNTVYIIDFGLAKRYRDPRTHKHIAYREHKNLTGTARYASINTHIGIEQSRRDDLESLGYVIMYFLRGSLPWQGLKANTKKQKYERILERKMATSPEQLCKGFPSEFRSYFEYCRALRFDDRPDYSYLKRLFSELFLRKAFTDDAMFDWTILNMQ 402
            M+LRV KKYRL RKIGSGSFGDIYLG N+TTGEEVAIKLESVKTKHPQLLYESKIYRIL+GG+GIPNVRW+G+EGDYNVMVLDLLGPSLEDLFNYCGRRF LKTVL+LA QLL RLE++HTKSFIHRDVKPDNFLIGLG+  + ++IIDFGLAK+YRDPR+H+HI YRE+KNLTGTARYASINTHIGIEQSRRDDLESLGYV+MYF+RGSLPWQGLKANTKKQKYERI++RKM+TS EQLCKG+ +EFRSYFEYCR+LRF+DRPDY+YLKRLF ELF RK F  D MFDWT+LN+Q
Sbjct:    1 MELRVGKKYRLGRKIGSGSFGDIYLGTNMTTGEEVAIKLESVKTKHPQLLYESKIYRILHGGLGIPNVRWYGIEGDYNVMVLDLLGPSLEDLFNYCGRRFQLKTVLMLADQLLGRLEYVHTKSFIHRDVKPDNFLIGLGKRQSVIHIIDFGLAKKYRDPRSHQHIPYRENKNLTGTARYASINTHIGIEQSRRDDLESLGYVLMYFIRGSLPWQGLKANTKKQKYERIMDRKMSTSTEQLCKGYATEFRSYFEYCRSLRFEDRPDYAYLKRLFKELFYRKGFQYDNMFDWTVLNLQ 296

[Close]

BLAST of NO18G01210 vs. NCBI_GenBank
Match: EJK46125.1 (hypothetical protein THAOC_35228 [Thalassiosira oceanica])

HSP 1 Score: 532.7 bits (1371), Expect = 1.200e-147
Identity = 248/296 (83.78%), Postives = 277/296 (93.58%), Query Frame = 0

Query:  106 MDLRVNKKYRLSRKIGSGSFGDIYLGVNVTTGEEVAIKLESVKTKHPQLLYESKIYRILYGGVGIPNVRWFGVEGDYNVMVLDLLGPSLEDLFNYCGRRFNLKTVLLLAQQLLSRLEFLHTKSFIHRDVKPDNFLIGLGRHHNTVYIIDFGLAKRYRDPRTHKHIAYREHKNLTGTARYASINTHIGIEQSRRDDLESLGYVIMYFLRGSLPWQGLKANTKKQKYERILERKMATSPEQLCKGFPSEFRSYFEYCRALRFDDRPDYSYLKRLFSELFLRKAFTDDAMFDWTILNMQ 402
            M+LRV KKYRL RKIGSGSFGDIYLG N+ TGEEVAIKLESVKTKHPQLLYESKIYRIL+GG+GIPNVRW+G+EGDYNVMVLDLLGPSLEDLFNYCGRRF LKTVL+LA QLL RLE++HTKSFIHRDVKPDNFLIGLG+  + ++IIDFGLAK+YRDPR+H+HI YRE+KNLTGTARYASINTHIGIEQSRRDDLESLGYV+MYF+RGSLPWQGLKANTKKQKYERI++RKM+TS EQLCKG+ +EFRSYFEYCR+LRF+DRPDY+YLKRLF ELF RK F  D MFDWT+LN+Q
Sbjct:   90 MELRVGKKYRLGRKIGSGSFGDIYLGTNMGTGEEVAIKLESVKTKHPQLLYESKIYRILHGGLGIPNVRWYGIEGDYNVMVLDLLGPSLEDLFNYCGRRFQLKTVLMLADQLLGRLEYVHTKSFIHRDVKPDNFLIGLGKRQSVIHIIDFGLAKKYRDPRSHQHIPYRENKNLTGTARYASINTHIGIEQSRRDDLESLGYVLMYFIRGSLPWQGLKANTKKQKYERIMDRKMSTSTEQLCKGYATEFRSYFEYCRSLRFEDRPDYAYLKRLFKELFYRKGFQYDNMFDWTVLNLQ 385

The following BLAST results are available for this feature:

BLAST of NO18G01210 vs. NCBI_GenBank

BLAST of NO18G01210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_005855981.1	3.200e-180	77.02	casein kinase I HRR25-like protein [Nannochloropsi...	[more]
EWM23331.1	3.900e-170	82.49	Protein kinase, ATP binding site [Nannochloropsis ...	[more]
CBJ25928.1	9.900e-150	85.14	Casein kinase (serine/threonine/tyrosine protein k...	[more]
GAX20902.1	1.700e-149	84.46	casein kinase 1, epsilon [Fistulifera solaris]	[more]
GAX16507.1	1.700e-149	84.46	casein kinase 1, epsilon [Fistulifera solaris]	[more]
XP_002184539.1	6.400e-149	84.46	predicted protein [Phaeodactylum tricornutum CCAP ...	[more]
XP_002182304.1	6.400e-149	84.46	predicted protein [Phaeodactylum tricornutum CCAP ...	[more]
OEU16070.1	6.400e-149	84.46	kinase-like protein [Fragilariopsis cylindrus CCMP...	[more]
XP_002295127.1	1.900e-148	84.12	hypothetical protein THAPSDRAFT_14638, partial [Th...	[more]
EJK46125.1	1.200e-147	83.78	hypothetical protein THAOC_35228 [Thalassiosira oc...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL008	nonsL008	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR060	ncniR060	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR043	ngnoR043	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK003977	NSK003977	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO18G01210.1	NO18G01210.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|674263	gene_9047	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
CK	gene7117	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO18G01210.1	NO18G01210.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO18G01210 ID=NO18G01210|Name=NO18G01210|organism=Nannochloropsis oceanica|type=gene|length=2308bp
ATGCAGCAGGAGTTCTTCTGGCTGCTGATCCATGGCCTGGACAGCAGTGg
taatatcggcgcttggatgtcctccaaacaaacaatacgctttgccggag
agaatatggcgtgttaggtaattgttagactaggcggtgcatgattacac
gctgtctttgcggctttctgtccccaaaatctattatcatcctcataccc
tcgtacaaccacaccaaacacaccacaaacaggtgtcccgccctcatcca
cccacctgccttgcatccaaacacctggatgtctgcgggatgacttggtg
gacattgtcgactgccggatggaaccgaggctgagggggccaaatcaaag
aaaaatggtctgttgctacttcttctttgggatgtgccgctggatgtgca
gacccttgttacgcccctcctgccgcctccacaacaaccttccatatatc
gagtatggggaatgatcgagatgcatgtttgcgtatagagctcgaggcag
gcggccacggaccgtagtcacggttgacgaatgagagaagacgccgccgg
gcttctgacctcacatacggacaattgacacagcagcctctcacccatgc
ctaatctcgcaccactaacaaaatactaacagggagccctttttagctgg
atcaaagcaagggttagaacagctcggtccacgtgcgagaagagtggagg
aagaggaggaggaggcagtctcgaccaccatcctgccaaagggaaaccac
gcagcagtgctgccgtctgtctgccttcgcactcacgctagcgcctcccg
ccggctgatatctcgagccgttttttcctctttttgccgccgcgcccgca
accatagAGGACCAGCCGTTATACCCGCAGGCGGCGCAGCAGTTAGACCT
CCCGCACGGGCTCGTCTCGGGACTTATCGGCACGACCGGTGGTGCTCAGA
GCAGTAACCGGCGCGCCCAAGCAGGACAGACATCGTTGTCTGCCCAATAC
GCAGGAGGAATCCTGCCGATCCCAGGTACGGGGGCAGCAGCCGCAGCCGG
AACCGGTGGCGGAGGAGGCGCCAGCACCACGGCGTCGTCCTCAGCAGCAG
CAGCGGCGGCAGCCTCGGGGGGGATGGACCTGCGGGTAAACAAGAAGTAC
CGTCTGAGCAGGAAGATTGGAAGCGGTTCTTTCGGAGACATTTATTTGGG
GGTGAACGTCACAACGGGCGAGGAGGTTGCTATCAAGCTGGAGAGCGTCA
AGACCAAGCACCCGCAGTTGCTGTACGAATCCAAGATCTACCGGATTCTG
TATGGTGGGGTCGGCATCCCCAACGTGCGCTGGTTCGGGGTGGAGGGTGA
CTACAATGTCATGGTCCTGGACCTGCTCGGGCCCTCACTGGAGGACCTGT
TCAATTACTGCGGGCGTCGGTTCAACCTCAAGACCGTGCTCCTCCTCGCC
CAGCAGCTGCTCTCCCGACTGGAGTTTCTGCATACCAAGAGCTTCATCCA
CAGGGACGTGAAGCCCGACAATTTCCTGATCGGACTGGGCCGGCACCATA
ACACTGTCTACATCATCGACTTTGGCCTGGCCAAGCGCTACCGAGACCCC
CGCACGCACAAGCACATCGCCTACCGAGAACACAAGAACCTGACCGGCAC
GGCCCGCTACGCCTCCATCAACACTCACATCGGTATCGAGCAGTCTCGTC
GCGACGACCTGGAATCGCTAGGCTACGTGATCATGTACTTTTTGCGTGGC
TCTCTCCCCTGGCAAGGCCTCAAGGCCAACACCAAGAAGCAGAAGTACGA
GCGCATCCTGGAGCGCAAGATGGCCACATCGCCCGAGCAGCTGTGCAAGG
GTTTCCCCTCTGAATTTCGCTCTTACTTCGAGTACTGTCGAGCCCTGCGC
TTTGATGACCGGCCCGACTACTCCTATTTAAAGCGACTCTTTTCCGAGCT
CTTCCTAAGGAAGGCCTTCACGGACGACGCCATGTTCGATTGGACCATCC
TCAACATGCAGCAGGAGCGCAGCCGCCAGCAGCAGCAGCAGCAGCAGCAG
CAGGAGGAGCAGCAGCAGCAGGCGCGGGGGGAAATGGGAGAAGGAGGGAA
AGCGGAAGGCGCAACCGCTTTAGGGGAGGGAGGAGGGAAGGAAGGACTAT
CGGCAGGAGAGGACGGGAAGGCAAGGGGAAAGGAAGGGGGGATAGTCCGA
CTAGATGGCAAGGGAGGAGGAGGGGAGGAGGAAGTGCAGGATGGAGGATT
AGCTGCGGGGATGGGACGGCGGCGGGGCATCTTGTCAAGACAAGACGATC
CCACTTAG

protein sequence of NO18G01210.1

>NO18G01210.1-protein ID=NO18G01210.1-protein|Name=NO18G01210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=500bp
MQQEFFWLLIHGLDSSEDQPLYPQAAQQLDLPHGLVSGLIGTTGGAQSSN
RRAQAGQTSLSAQYAGGILPIPGTGAAAAAGTGGGGGASTTASSSAAAAA
AASGGMDLRVNKKYRLSRKIGSGSFGDIYLGVNVTTGEEVAIKLESVKTK
HPQLLYESKIYRILYGGVGIPNVRWFGVEGDYNVMVLDLLGPSLEDLFNY
CGRRFNLKTVLLLAQQLLSRLEFLHTKSFIHRDVKPDNFLIGLGRHHNTV
YIIDFGLAKRYRDPRTHKHIAYREHKNLTGTARYASINTHIGIEQSRRDD
LESLGYVIMYFLRGSLPWQGLKANTKKQKYERILERKMATSPEQLCKGFP
SEFRSYFEYCRALRFDDRPDYSYLKRLFSELFLRKAFTDDAMFDWTILNM
QQERSRQQQQQQQQQEEQQQQARGEMGEGGKAEGATALGEGGGKEGLSAG
EDGKARGKEGGIVRLDGKGGGGEEEVQDGGLAAGMGRRRGILSRQDDPT*

Synonyms

Publications