NO18G01140, NO18G01140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G01140 vs. NCBI_GenBank
Match: GAX29183.1 (hypothetical protein FisN_28Lh012 [Fistulifera solaris]) HSP 1 Score: 76.3 bits (186), Expect = 1.400e-10 Identity = 66/176 (37.50%), Postives = 90/176 (51.14%), Query Frame = 0 Query: 34 ITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHKTGSKALFDALESDTTYD--KIVLLKMARKVGAATLVNALAESVKPRLGKGSDAALLKFQDVLLAGLKGGEAETGKQFGFGIQGGNKLIVTINGKKQGEIASGPLAQAMLKTYLDDNAVSKDMK 208 I+ P T LSL GVGVR K GP +K+Y V Y A+ +KL++ + KT KAL L+ + L M KVGA + +A+A+SV PR GS + K + ++L G+ A G F + + VT+NGK QG +AS LA A YLDD VS M+ Sbjct: 31 ISFPDTRGGLSLFGVGVRRK---GP--IKIYSVAMY-STSALQEKLAQCQ--KTDKKAL-SVLQKGVKEEGQASFSLNMNFKVGAEKMASAIADSVAPR-HSGSSQDVEKLKALILKGVPQAGATKGTTMDFDC-SHDSISVTVNGKAQGSVASSSLASAFCDVYLDDKCVSPAMR 195
BLAST of NO18G01140 vs. NCBI_GenBank
Match: XP_024385938.1 (fatty-acid-binding protein 3, chloroplastic-like isoform X2 [Physcomitrella patens] >PNR47019.1 hypothetical protein PHYPA_014139 [Physcomitrella patens]) HSP 1 Score: 76.3 bits (186), Expect = 1.400e-10 Identity = 69/209 (33.01%), Postives = 102/209 (48.80%), Query Frame = 0 Query: 21 MTEPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHKTG----SKALFDALESDTTYDKIVLLKMARKVGAATLVNALAESVKPRL-----GKGSDAALLKFQDVLLAGLKGGEAETGKQFGFGIQGGNKLIVTI------NGKKQGEIASGPLAQAMLKTYLDDNAVSKDMKDSVAQGI 215 +TEPA+ IKF +T+P ++ +L+ G GVR +K + L VKVY VG Y + V L+ +KG +ALF L + +K + +K+AR V AT AL E++ PRL G DAAL +F +V K + G + L + + N K + I S L A+ +L +AVS K +VA+GI Sbjct: 122 VTEPATSIKFALLLTVPDSSNTLTFLGAGVR-EKQIAFLKVKVYAVGVYA-QPDVAASLASWKGKSAADLVKDEALFQEL-AQAPVEKALQIKLARDVDGATFWGALDEALVPRLTASGAGADGDAALAEFGNV----FKNRSLQKGYVITLTWVQPSTLRIAVAESEAANLKTEASIESKALLSALYDVFLGTSAVSPSAKAAVAEGI 323
BLAST of NO18G01140 vs. NCBI_GenBank
Match: XP_024385937.1 (fatty-acid-binding protein 3, chloroplastic-like isoform X1 [Physcomitrella patens]) HSP 1 Score: 76.3 bits (186), Expect = 1.400e-10 Identity = 69/209 (33.01%), Postives = 102/209 (48.80%), Query Frame = 0 Query: 21 MTEPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHKTG----SKALFDALESDTTYDKIVLLKMARKVGAATLVNALAESVKPRL-----GKGSDAALLKFQDVLLAGLKGGEAETGKQFGFGIQGGNKLIVTI------NGKKQGEIASGPLAQAMLKTYLDDNAVSKDMKDSVAQGI 215 +TEPA+ IKF +T+P ++ +L+ G GVR +K + L VKVY VG Y + V L+ +KG +ALF L + +K + +K+AR V AT AL E++ PRL G DAAL +F +V K + G + L + + N K + I S L A+ +L +AVS K +VA+GI Sbjct: 129 VTEPATSIKFALLLTVPDSSNTLTFLGAGVR-EKQIAFLKVKVYAVGVYA-QPDVAASLASWKGKSAADLVKDEALFQEL-AQAPVEKALQIKLARDVDGATFWGALDEALVPRLTASGAGADGDAALAEFGNV----FKNRSLQKGYVITLTWVQPSTLRIAVAESEAANLKTEASIESKALLSALYDVFLGTSAVSPSAKAAVAEGI 330
BLAST of NO18G01140 vs. NCBI_GenBank
Match: XP_024385939.1 (fatty-acid-binding protein 3, chloroplastic-like isoform X3 [Physcomitrella patens] >XP_024385940.1 fatty-acid-binding protein 3, chloroplastic-like isoform X3 [Physcomitrella patens]) HSP 1 Score: 76.3 bits (186), Expect = 1.400e-10 Identity = 69/209 (33.01%), Postives = 102/209 (48.80%), Query Frame = 0 Query: 21 MTEPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHKTG----SKALFDALESDTTYDKIVLLKMARKVGAATLVNALAESVKPRL-----GKGSDAALLKFQDVLLAGLKGGEAETGKQFGFGIQGGNKLIVTI------NGKKQGEIASGPLAQAMLKTYLDDNAVSKDMKDSVAQGI 215 +TEPA+ IKF +T+P ++ +L+ G GVR +K + L VKVY VG Y + V L+ +KG +ALF L + +K + +K+AR V AT AL E++ PRL G DAAL +F +V K + G + L + + N K + I S L A+ +L +AVS K +VA+GI Sbjct: 83 VTEPATSIKFALLLTVPDSSNTLTFLGAGVR-EKQIAFLKVKVYAVGVYA-QPDVAASLASWKGKSAADLVKDEALFQEL-AQAPVEKALQIKLARDVDGATFWGALDEALVPRLTASGAGADGDAALAEFGNV----FKNRSLQKGYVITLTWVQPSTLRIAVAESEAANLKTEASIESKALLSALYDVFLGTSAVSPSAKAAVAEGI 284
BLAST of NO18G01140 vs. NCBI_GenBank
Match: XP_017424354.1 (PREDICTED: fatty-acid-binding protein 3, chloroplastic [Vigna angularis] >KOM42669.1 hypothetical protein LR48_Vigan05g027300 [Vigna angularis] >BAT93208.1 hypothetical protein VIGAN_07213500 [Vigna angularis var. angularis]) HSP 1 Score: 75.9 bits (185), Expect = 1.800e-10 Identity = 59/204 (28.92%), Postives = 104/204 (50.98%), Query Frame = 0 Query: 23 EPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHK----TGSKALFDALESDTTYDKIVLLKMARKVGAATLVNALAESVKPRLGKGS---DAALLKFQDVLLAGLKGGEAETGKQFGFGIQGGNKLIVTIN-----GKKQGEIASGPLAQAMLKTYLDDNAVSKDMKDSVAQGI 215 EPA+K+KF + PG + SL+L G G R +K+ + VKVY G Y+D+ ++ +L+ +KG G+ +LF + ++++K + + + R V T +AL++++ PR+ + + AL F+ V L + G KL+V+++ I S +A A+ +L DN VS +K SVA+G+ Sbjct: 80 EPATKVKFQTCLNFPGCSNSLTLFGAGYR-EKVFAIIGVKVYAAGLYLDQ-SITPELNAWKGLSKDAIQGNSSLFQTI-FQSSFEKSLQIILVRDVDGQTFWDALSDAIAPRIPASTSVDETALTTFRGVFL----DRPLKKGTFILLTWLNPTKLLVSVSPNGFPSTVDATIESANVASALFNVFLGDNPVSHSLKSSVAEGL 276
BLAST of NO18G01140 vs. NCBI_GenBank
Match: OWM88557.1 (hypothetical protein CDL15_Pgr002324 [Punica granatum]) HSP 1 Score: 75.9 bits (185), Expect = 1.800e-10 Identity = 61/209 (29.19%), Postives = 105/209 (50.24%), Query Frame = 0 Query: 23 EPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHKT----GSKALFDALESDTTYDKIVLLKMARKVGAATLVNALAESVKPR---LGKGSDAALLKFQDVLLAGLKGGEAETGKQFGFGIQGGNKLIVTIN-----GKKQGEIASGPLAQAMLKTYLDDNAVSKDMKDSVAQGILTWIN 220 EPA+K+KF ++TL G ++ LSL G G R +K+ + VKVY GFY++ ++ KL +KG G +LF ++ + +K + + + R V T +AL E++ PR L ++AL F+D+ +G G +K++V+++ + EI S + A+ +L D VS +K SV G++ +N Sbjct: 82 EPATKVKFSTSLTLAGCSSPLSLIGTGYR-EKVFAIIGVKVYAAGFYMN-PSLSAKLDSWKGKSASSIHGDGSLFSSI-FQVSLEKSLQIVLVRDVDGKTFWDALDEAISPRIKTLTFVDESALSTFRDI----FQGRPLNKGTSIFLTWLDKSKMLVSVSSDGLPSEVDAEIESENVTSALFDVFLGDPPVSPSLKASVVVGLVKILN 283
BLAST of NO18G01140 vs. NCBI_GenBank
Match: XP_003546743.1 (PREDICTED: fatty-acid-binding protein 3, chloroplastic-like [Glycine max] >KHN39751.1 Chalcone--flavonone isomerase 2 [Glycine soja] >KRH13487.1 hypothetical protein GLYMA_15G242900 [Glycine max]) HSP 1 Score: 75.5 bits (184), Expect = 2.400e-10 Identity = 57/204 (27.94%), Postives = 108/204 (52.94%), Query Frame = 0 Query: 23 EPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHK----TGSKALFDALESDTTYDKIVLLKMARKVGAATLVNALAESVKPRLGKGS---DAALLKFQDVLLAGLKGGEAETGKQFGFGIQGGNKLIVTINGK-----KQGEIASGPLAQAMLKTYLDDNAVSKDMKDSVAQGI 215 EPA+ +KF ++ PG + SL+L G G R +K+ + VKVY G Y+D+ +V ++L+ +KG G+ +LF+ + ++++K + + + R V T +AL++++ PR+ + + + AL F+ V L + G ++L+V+++ I S +A A+ +L D+ VS +K SVA+G+ Sbjct: 80 EPATNVKFQTSLNFPGCSNSLTLFGTGYR-EKVFAIIGVKVYAAGLYLDQ-SVTQELNAWKGQSKDAIQGNSSLFETI-FQSSFEKSLQIVLVRDVDGKTFWDALSDAISPRIPQPTTTDETALTTFRGVFL----DRPLKKGAIIILTWLNPSRLLVSVSSNGFPSTVDATIESANVASALFNVFLGDSPVSPSLKASVAEGL 276
BLAST of NO18G01140 vs. NCBI_GenBank
Match: OEU15653.1 (hypothetical protein FRACYDRAFT_218376 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 75.5 bits (184), Expect = 2.400e-10 Identity = 64/194 (32.99%), Postives = 98/194 (50.52%), Query Frame = 0 Query: 21 MTEPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHKTGSKALFDALESDTTYDKIV-LLKMARKVGAATLVNALAESVKPRLGKGSDAALLKFQDVLLAGLKG-GEAETGKQFGFGIQGGNKLIVTINGKKQGEIASGPLAQAMLKTYLDDNAVSKDMKDSVAQ 213 M + A+ I FD ++ LSL GVGVR K GP +KVY VG Y + V + LS + K AL S + + +LKM KVGA + +A+A+SV PR SD+ + + +D++ G+ G G A G F + + V ++GK G + S L +A YLDD VS +++++ + Sbjct: 1 MKDAATGIPFD------SKSSGLSLFGVGVRKK---GP--IKVYSVGMYCSDN-VQEDLSSISRSDSKDKKAIAALRSGASSNPTTFVLKMNFKVGAEKMASAIADSVSPR--HSSDSEVSQLKDLIFEGVSGKGAAVKGTVLEFDCT-DDGVEVKVDGKGYGNVPSDALGKAFRDVYLDDKCVSPKLRENILE 179
BLAST of NO18G01140 vs. NCBI_GenBank
Match: GAX25544.1 (hypothetical protein FisN_28Hh012 [Fistulifera solaris]) HSP 1 Score: 75.1 bits (183), Expect = 3.100e-10 Identity = 75/211 (35.55%), Postives = 103/211 (48.82%), Query Frame = 0 Query: 1 MARLSFACLVSACLALTTC--AMTEPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHKTGSKALFDALESDTTYD--KIVLLKMARKVGAATLVNALAESVKPRLGKGSDAALLKFQDVLLAGLKGGEAETGKQFGFGIQGGNKLIVTINGKKQGEIASGPLAQAMLKTYLDDNAVSKDMK 208 ++R + A ++A L L A T+ A+ I F P LSL GVGVR K GP +K+Y V Y A+ +KL+K K KT K L L+ + L M KVGA + +A+A+SV PR GS + K + ++L G+ A G F + + VT+NGK QG +AS LA A YLDD VS M+ Sbjct: 2 LSRNAIAHAIAALLVLVVAVDARTDKATGISF------PDARGGLSLFGVGVRRK---GP--IKIYSVAMY-STSALQEKLAKCK--KTDKKTL-TVLQKGVKEEGQASFSLNMNFKVGAEKMASAIADSVAPR-HSGSSQDVEKLKALILKGVPQAGATKGTTMDFDC-SHDSISVTVNGKAQGSVASSSLASAFCDVYLDDKCVSPAMR 195
BLAST of NO18G01140 vs. NCBI_GenBank
Match: ADE76284.1 (unknown [Picea sitchensis]) HSP 1 Score: 74.7 bits (182), Expect = 4.000e-10 Identity = 63/207 (30.43%), Postives = 103/207 (49.76%), Query Frame = 0 Query: 21 MTEPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHKTGSKALFDALESDTTY----DKIVLLKMARKVGAATLVNALAESVKPRLGKGSDAALLKFQDVLLAGLKGGEAETGKQFGFGIQGGNKLIVTINGKKQGEIA-----SGPLAQAMLKTYLDDNAVSKDMKDSVAQGILTWI 219 + EPA+ +KF ++ +PG ++SLSLAG G R KK + ++VKVY G YVD + L+ + G K GS+ D L + + +K + + + R + T AL E++ PRL K + AA K D+ +G + G + ++V+I+ +A S +A A+ Y + VS +K SVA G+ + I Sbjct: 90 IVEPATNVKFLTSLNVPGGSSSLSLAGTGFREKK-IAIISVKVYAAGLYVD-TTIKSYLAAWSG-KLGSQIEQDNLFFNAVFEAPVEKSLQIVLVRDIDGETFWGALDEALSPRL-KTTGAAEQKALDIFRETFRGKSLKRGTTIYLNWLKSSIMLVSISSDGSPSVADATIDSPAVAFALFDVYFGSHPVSPPLKKSVASGLASII 292 The following BLAST results are available for this feature:
BLAST of NO18G01140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G01140 ID=NO18G01140|Name=NO18G01140|organism=Nannochloropsis oceanica|type=gene|length=669bpback to top protein sequence of NO18G01140.1 >NO18G01140.1-protein ID=NO18G01140.1-protein|Name=NO18G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=223bpback to top Synonyms
Publications
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