NO18G01140, NO18G01140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G01140 vs. NCBI_GenBank
Match: EWM23313.1 (Chalcone isomerase, subgroup [Nannochloropsis gaditana]) HSP 1 Score: 351.3 bits (900), Expect = 2.200e-93 Identity = 187/222 (84.23%), Postives = 204/222 (91.89%), Query Frame = 0 Query: 1 MARLSFACLVSACLALTTCAMTEPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHKTGSKALFDALESDTTYDKIVLLKMARKVGAATLVNALAESVKPRLGKGSDAALLKFQDVLLAGLKGGEAETGKQFGFGIQGGNKLIVTINGKKQGEIASGPLAQAMLKTYLDDNAVSKDMKDSVAQGILTWINVTK 223 M RLS AC VSA LALTT AM EPA+KIKF++TI+LPG+ A LSLAGVGVRVKKLVGPLAVKVYGVG YVD+ +KLSKFKGHK GSKALFDALE+ +DKIVLLKMARKVGAATLVNALAESVKPRLGKGS+AALL+FQDVLLAGLKGGEAETGKQFGFGIQGG+KLIVTINGKKQGEIASGPLAQA+LKTYLD+NAVSKDMK+SVAQG+LTWIN+ K Sbjct: 1 MGRLSLACCVSALLALTTYAMIEPATKIKFEETISLPGSVAGLSLAGVGVRVKKLVGPLAVKVYGVGLYVDKGVAVRKLSKFKGHKAGSKALFDALETG-NFDKIVLLKMARKVGAATLVNALAESVKPRLGKGSEAALLQFQDVLLAGLKGGEAETGKQFGFGIQGGSKLIVTINGKKQGEIASGPLAQALLKTYLDNNAVSKDMKESVAQGLLTWINLVK 221
BLAST of NO18G01140 vs. NCBI_GenBank
Match: XP_005855968.1 (hypothetical protein NGA_0361402 [Nannochloropsis gaditana CCMP526] >EKU20377.1 hypothetical protein NGA_0361402 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 330.5 bits (846), Expect = 4.100e-87 Identity = 172/202 (85.15%), Postives = 189/202 (93.56%), Query Frame = 0 Query: 21 MTEPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHKTGSKALFDALESDTTYDKIVLLKMARKVGAATLVNALAESVKPRLGKGSDAALLKFQDVLLAGLKGGEAETGKQFGFGIQGGNKLIVTINGKKQGEIASGPLAQAMLKTYLDDNAVSKDMKDSVAQGILTWINVTK 223 M EPA+KIKF++TI+LPG+ A LSLAGVGVRVKKLVGPLAVKVYGVG YVD+ +KLSKFKGHK GSKALFDALE+ +DKIVLLKMARKVGAATLVNALAESVKPRLGKGS+AALL+FQDVLLAGLKGGEAETGKQFGFGIQGG+KLIVTINGKKQGEIASGPLAQA+LKTYLD+NAVSKDMK+SVAQG+LTWIN+ K Sbjct: 1 MIEPATKIKFEETISLPGSVAGLSLAGVGVRVKKLVGPLAVKVYGVGLYVDKGVAVRKLSKFKGHKAGSKALFDALETG-NFDKIVLLKMARKVGAATLVNALAESVKPRLGKGSEAALLQFQDVLLAGLKGGEAETGKQFGFGIQGGSKLIVTINGKKQGEIASGPLAQALLKTYLDNNAVSKDMKESVAQGLLTWINLVK 201
BLAST of NO18G01140 vs. NCBI_GenBank
Match: CBJ30273.1 (Chalcone Isomerase [Ectocarpus siliculosus]) HSP 1 Score: 147.5 bits (371), Expect = 4.900e-32 Identity = 95/198 (47.98%), Postives = 123/198 (62.12%), Query Frame = 0 Query: 21 MTEPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFK---GHKTGSKALFDALESDTTYDKIVLLKMARKVGAATLVNALAESVKPRLGKGSDAALLKFQDVLLAGL-KGGEAETGKQFGFGIQGGNKLIVTINGKKQGEIASGPLAQAMLKTYLDDNAVSKDMKDSVAQGI 215 +TE A+KI F + ++LPG + S SL G GVRVKK +GP VKVY VG YVDEKA K+L K G G F + + ++K ++LKMAR+VG +V+ALAESVKPR+ GS L FQD+LL + K G A+ G QFGF + G L V++NGK G I SGPL+ AM+ YL AVS K + A G+ Sbjct: 33 VTERATKISFREKVSLPGGSGS-SLMGTGVRVKK-IGPAGVKVYAVGLYVDEKAAAKELEVHKGEDGESLGKNDGFFTRVAKSNFEKTMVLKMAREVGTEKMVSALAESVKPRI-SGSKKPLDSFQDILLKAVGKEGAAKKGMQFGFVCKPG-ALCVSVNGKDAGTIKSGPLSSAMVDVYLGKKAVSPGAKKAFATGV 226
BLAST of NO18G01140 vs. NCBI_GenBank
Match: XP_005836862.1 (hypothetical protein GUITHDRAFT_161963, partial [Guillardia theta CCMP2712] >EKX49882.1 hypothetical protein GUITHDRAFT_161963, partial [Guillardia theta CCMP2712]) HSP 1 Score: 94.4 bits (233), Expect = 4.900e-16 Identity = 73/186 (39.25%), Postives = 103/186 (55.38%), Query Frame = 0 Query: 34 ITLPGTAAS----LSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHKTGSKALFDALESDTTYDKIVLLKMARKVGAATLVNALAESVKPRLGKGSDAALLKFQDVLLAGLKGGEAETGKQFGFGIQGGNKLIVTINGKKQGEIASGPLAQAMLKTYLDDNAVSKDMKDSVAQGIL 216 IT P T + L G G R K ++GP+AV VY VG YVD A K + K K+ +KAL + +Y K + + MAR VGA + NALAES++PR+ KG+DA L F+ + K ET + F IQ G+ L V+ G+K+ +S PL +AM YL ++ VS K+S+ G+L Sbjct: 65 ITFPETVKAGSKLLKFIGAGERKKAILGPVAVNVYAVGMYVDSDAA--KAAAPKDEKSANKALLEG-----SYPKALKIVMARTVGAEKIGNALAESLEPRV-KGTDAPLDAFKSFFGSMSK---LETNNEIDF-IQMGSDLQVSALGQKK-TFSSAPLCKAMFDIYLGESPVSVHAKESMVAGLL 237
BLAST of NO18G01140 vs. NCBI_GenBank
Match: XP_013903925.1 (hypothetical protein MNEG_3049 [Monoraphidium neglectum] >KIZ04906.1 hypothetical protein MNEG_3049 [Monoraphidium neglectum]) HSP 1 Score: 92.0 bits (227), Expect = 2.400e-15 Identity = 70/217 (32.26%), Postives = 109/217 (50.23%), Query Frame = 0 Query: 6 FACLVSACLA---LTTCAMTEPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHKTG----SKALFDALESDTTYDKIVLLKMA-RKVGAATLVNALAESVKPRLGKGSDAALLKFQDVLLAGLKGGEAETGKQFGFGIQGGNKLIVTINGKKQGEIASGPLAQAMLKTYLDDNAVSKDMKDSVAQGI 215 FA + + LA L EPA+ I + D + + LAGVGVR K+++G + VY +G YVD K L K+KG + ++A FDA+ + ++++ + L ++ + A VNAL E + P L K + ++K + L G + G F G KL+ I+G++ G I S L +A+ YL +AVS D K S AQG+ Sbjct: 54 FASVSAGALAPPKLFATPKVEPATGIDYPDNLCVITKNHCPGLAGVGVRAKRVLGLKNINVYALGLYVDAHGAKKALGKWKGSSSDTLLTNQAAFDAITTAESFERSLRLVISFGSLKRAQFVNALEERLAPPLNKAGKSDVMKSFERL---FDGASFKKGTAIDFSASGKGKLVTKIDGQQVGTIESPELVKALFDIYLGSDAVSADAKASFAQGL 267
BLAST of NO18G01140 vs. NCBI_GenBank
Match: OUS46896.1 (chalcone isomerase [Ostreococcus tauri]) HSP 1 Score: 82.4 bits (202), Expect = 1.900e-12 Identity = 70/197 (35.53%), Postives = 95/197 (48.22%), Query Frame = 0 Query: 18 TCAMTEPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHKTGSKALFDALESDTTYDKIVLLKMARKVGAATLVNALAESVKPRLGKGSDAALLKFQDVLLAGLKGGEAETGKQFGFGIQGGNKLIVTINGKKQGEIASGPLAQAMLKTYLDDNAVSKDMKDSVAQGI 215 T TE A+ + T G A+L+LAGVG RVKK+ G L VKVY GFYVD AVG + + G DALE+ T ++ + LK AR VG +V ALAE ++P + S AL +F+ + G + G F L I GKK IA L A+ Y+ + V +K +V + I Sbjct: 2 TTMTTERATGLAVPRAQTFDG--AALTLAGVGARVKKICG-LGVKVYACGFYVD--AVGVREAMGDGET-------DALEALKTCERSIRLKFARDVGGDKIVEALAERIRPAMDTDS-TALKRFEAI----FDGVSFKKGTSLDFTATADGALATRIKGKKVSHIADRALVDALFAAYVGADPVIPSLKSAVREFI 181
BLAST of NO18G01140 vs. NCBI_GenBank
Match: XP_003080708.2 (Chalcone isomerase [Ostreococcus tauri] >CEG01417.1 Chalcone isomerase [Ostreococcus tauri]) HSP 1 Score: 81.3 bits (199), Expect = 4.300e-12 Identity = 69/197 (35.03%), Postives = 95/197 (48.22%), Query Frame = 0 Query: 18 TCAMTEPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHKTGSKALFDALESDTTYDKIVLLKMARKVGAATLVNALAESVKPRLGKGSDAALLKFQDVLLAGLKGGEAETGKQFGFGIQGGNKLIVTINGKKQGEIASGPLAQAMLKTYLDDNAVSKDMKDSVAQGI 215 T TE A+ + T G A+L+LAGVG RVKK+ G L VKVY GFYVD AVG + + G DALE+ T ++ + LK AR VG +V ALAE ++P + S +L +F+ + G + G F L I GKK IA L A+ Y+ + V +K +V + I Sbjct: 2 TTMTTERATGLAVPRAQTFDG--AALTLAGVGARVKKICG-LGVKVYACGFYVD--AVGVREAMGDGET-------DALEALKTCERSIRLKFARDVGGDKIVEALAERIRPAMDADS-TSLKRFEAI----FDGVSFKKGTSLDFTATADGALATRIKGKKVSHIADRALVDALFAAYVGADPVIPSLKSAVREFI 181
BLAST of NO18G01140 vs. NCBI_GenBank
Match: XP_002286126.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95767.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 79.3 bits (194), Expect = 1.600e-11 Identity = 76/217 (35.02%), Postives = 109/217 (50.23%), Query Frame = 0 Query: 2 ARLSFACLVSACLALTTCAMTEPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHKTGS-KALFDALESDTTYDKIVLLKMARKVGAATLVNALAESVKPRLGKGSDAALLKFQDVLLAGL-KGGEAETGKQFGFGIQGGNKLIVTINGKKQGEIASGPLAQAMLKTYLDDNAVSKDMKDSVAQGILT 217 A L+ A ++ A+ + A+KI+FDDT+ LSL GVGVR K GP +KVY VG Y D++ S K +K G+ L +L+S T LLKM KVGA + A+AESV PR AA+ + ++L G+ G A G F + V+++GK+ G A+ L +A YLDD AVS +++S + T Sbjct: 12 AFLAVALSIAPSSVHAAAALIDSATKIQFDDTL------GGLSLFGVGVRKK---GP--IKVYSVGMYSDDETKASISSIPKSNKDGALSTLRTSLKSATA--TTFLLKMNFKVGAEKMAAAIAESVAPR--TSDKAAVEALKKLILDGVATKGAATPGTVLRFDCSSETGVKVSVDGKEIG--AAPGLCEAFCDVYLDDKAVSPALRNSCVENCCT 211
BLAST of NO18G01140 vs. NCBI_GenBank
Match: PIM97697.1 (Chalcone isomerase [Handroanthus impetiginosus]) HSP 1 Score: 79.0 bits (193), Expect = 2.100e-11 Identity = 60/204 (29.41%), Postives = 100/204 (49.02%), Query Frame = 0 Query: 23 EPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVDEKAVGKKLSKFKGHKT----GSKALFDALESDTTYDKIVLLKMARKVGAATLVNALAESVKPRLGKGS---DAALLKFQDVLLAGLKGGEAETGKQFGFGIQGGNKLIVTIN-----GKKQGEIASGPLAQAMLKTYLDDNAVSKDMKDSVAQGI 215 EP +K+KF ++TLPG ++SLSL G G R KK+ + VKVY G Y ++ ++ L +KGH +LF+A+ +K + + + R + T +AL E+V PRL + ++AL F+ + +G + G K++V I+ I S + A+ +L N VS +K SV++G+ Sbjct: 70 EPETKVKFQTSLTLPGCSSSLSLLGTGYREKKVFAIIGVKVYAAGLYANQ-SIFSTLDAWKGHSAADVQNDSSLFNAI-FRANLEKSLHIILVRDIDGKTFWDALDEAVSPRLSSPTPVDESALSTFRSI----FQGRPLKKGTSIFLTWLDTTKMLVCISPDVNPSSVDATIESSNVTYALFDVFLGGNPVSPSLKASVSKGL 267
BLAST of NO18G01140 vs. NCBI_GenBank
Match: XP_002503292.1 (predicted protein [Micromonas commoda] >ACO64550.1 predicted protein [Micromonas commoda]) HSP 1 Score: 77.4 bits (189), Expect = 6.200e-11 Identity = 63/197 (31.98%), Postives = 100/197 (50.76%), Query Frame = 0 Query: 21 MTEPASKIKFDDTITLPGTAASLSLAGVGVRVKKLVGPLAVKVYGVGFYVD----EKAVGKK-LSKFKGHKTGSKALFDALESDTTYDKIVLLKMARKVGAATLVNALAESVKPRLGKGSDAALLKFQDVLLAGLKGGEAETGKQFGFGIQGGNKLIVTINGKKQGEIASGPLAQAMLKTYLDDNAVSKDMKDSVAQ 213 +TEP + +K + G + L G+GVR+K++ G + VKVY G YV+ AVG + + K +ALFD + + +K V L AR + +A + +AL+E ++P LG S +L +F+ A G + G+ F GG KLI + K+ G+IA G L A+ YL + V K+S+ + Sbjct: 62 VTEPKTGLKLPGEYCVNGGKCA-PLTGMGVRIKRIAG-IGVKVYACGLYVNPASARAAVGDRYVGKSVKDVAKDQALFDVVNAAADVEKTVRLVFARDIDSAKIRDALSERLRPALGADS-PSLRRFE----AYFDGVTFKKGQSLTFTASGG-KLITSFGSKEAGQIADGKLCTALFDAYLGKSPVVPSAKESLGE 250 The following BLAST results are available for this feature:
BLAST of NO18G01140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G01140 ID=NO18G01140|Name=NO18G01140|organism=Nannochloropsis oceanica|type=gene|length=669bpback to top protein sequence of NO18G01140.1 >NO18G01140.1-protein ID=NO18G01140.1-protein|Name=NO18G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=223bpback to top Synonyms
Publications
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