NO18G00960, NO18G00960 (gene) Nannochloropsis oceanica

Overview
NameNO18G00960
Unique NameNO18G00960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2353
Alignment locationchr18:349475..351827 -

Link to JBrowse

Properties
Property NameValue
DescriptionRegulator of chromosome condensation/beta-lactamase-inhibitor protein II
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:349475..351827 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens
Homology
BLAST of NO18G00960 vs. NCBI_GenBank
Match: EWM23332.1 (Regulator of chromosome condensation/beta-lactamase-inhibitor protein II [Nannochloropsis gaditana])

HSP 1 Score: 764.2 bits (1972), Expect = 3.100e-217
Identity = 450/602 (74.75%), Postives = 487/602 (80.90%), Query Frame = 0
Query:    3 KRQREDGQLSKEAYYE-EAEYPYGSSYSSSASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSFQRATPSTLASRRLVKPKKLDRRKEYLEAVKALNQRFHAWVVDQVKHNPGVSLAENALEYLSYVSQLDTRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVNPRVVYSLRGKNVCNIACGALHNVAATSDGRVYTWGCNDDGAVGREGNEAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGKMFFNSATSEREILRKQERPMLLPGLERVREIRSGVSSNLALLADSTVLSWGIGESGELGRAINLELR-ENAEDVEEGEKPEYELYRIWKEHLTPRPMQVEGGGYLAGVKAIGAGYNHSMVVMAVNAEVWSTGLNNYGQLGLGHQTNQKLLQHVEALDGKGITEVTGGAHYSMALSGPTGKLFAFGRSDSSQLGIGREGGVLSAGASESLPVPVQFPAVEAKTGKVPFVTAVSCGGTFNLAVTASNQVYTWGFGEMGQLGHRPAKGEEAVDEPVPRPIDFSQA-AXXXXXXXXXFEVLKVDGGAQHSVVLARVPVAYLEEVKRKLDEADAK 602
            KR R DGQ+SKEAYYE E+ +     Y  SA+                                           SFQRATPSTLASRR VKPKKLDRRKEYLEAVKALN RF AWVVDQV  +PGVSL ENALEYLSYV+QLD RYLRKQGEVFTFGSSECGQCAHGDRSASDILVV PRVVY+LRGKNVCNIACGALHNVA TSDGRVYTWGCNDDGA+GR G+EA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGKMFFNSA+SEREILRKQ  PM LPGLE VREIR+G S+NLALLADSTV+SWGIGESGELGRAI LELR E AE  E+G K EYELYR+WKEHLTPRPMQ+ GG    GVKAIGAGYNHSMVVMAV AEVW+ GLNNYGQLGLGH+ N+ LL+HVE LDG+GITEVTGGAH+SMAL+GPTGKLFAFGRSDSSQLGIGR GGVL+ GASE+LPVPV FPA EA TGK PFVT VSCGGTFNLA T+SNQVY+WGFGEMGQLGHRPA+GEE  DEP PR +D SQA           FEVLKVDGGAQHSV+LA+VP  +++  +RKL+EA+AK
Sbjct:    2 KRSRMDGQVSKEAYYEAESSFITTLPYGQSAN-------------------------GELPGGPVGEASQASSAASFQRATPSTLASRRFVKPKKLDRRKEYLEAVKALNGRFQAWVVDQVSRDPGVSLCENALEYLSYVTQLDGRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVAPRVVYALRGKNVCNIACGALHNVATTSDGRVYTWGCNDDGALGRGGHEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGKMFFNSASSEREILRKQTGPMRLPGLEHVREIRAGASTNLALLADSTVVSWGIGESGELGRAITLELRAEEAE--EDGGKAEYELYRVWKEHLTPRPMQLAGGRLATGVKAIGAGYNHSMVVMAVRAEVWAAGLNNYGQLGLGHRENRYLLEHVEGLDGRGITEVTGGAHHSMALAGPTGKLFAFGRSDSSQLGIGRAGGVLAPGASEALPVPVLFPAREAGTGKPPFVTGVSCGGTFNLATTSSNQVYSWGFGEMGQLGHRPARGEETSDEPCPRLVDMSQARGGGDGGGARGFEVLKVDGGAQHSVILAKVPATFMDTARRKLEEAEAK 576          
BLAST of NO18G00960 vs. NCBI_GenBank
Match: XP_024583630.1 (FOG: RCC1 domain [Plasmopara halstedii] >CEG47261.1 FOG: RCC1 domain [Plasmopara halstedii])

HSP 1 Score: 295.8 bits (756), Expect = 3.100e-76
Identity = 180/513 (35.09%), Postives = 268/513 (52.24%), Query Frame = 0
Query:   78 FQRATPSTLASRRLVKPKKLDRRKEYLEAVKALNQRFHAWVVDQVKHNPGVSLAENALEYLSYVSQLDTRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVNPRVVYSLRGKNVCNIACGALHNVAATSDGRVYTWGCNDDGAVGREGNE--AFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGKMFFNSATSEREILRKQERPMLLPGLERVREIRSGVSSNLALLADSTVLSWGIGESGELGRAINLELRENAEDVEEGEKPEYELYRIWKEHLTPRPMQVEGGGYLAGVKAIGAGYNHSMVVMAVNAEVWSTGLNNYGQLGLGHQTNQKLLQHVEALDGKGITEVTGGAHYSMALSGPTGKLFAFGRSDSSQLGIGREGGVLSAGASESLPVPVQFPAVEAKTGKVPFVTAVSCGGTFNLAVTASNQVYTWGFGEMGQLGHRPAKGEEAVDEPVPRPIDFSQA-----AXXXXXXXXXFEVLKVDGGAQHSVVLARV 584
            F RA+   L +RR+V  K   R +E    + ALN+ F A +  Q  HN   S  +N  EYL+Y  ++D ++  + G++ TFGS +CGQ  HG     D++   PRVV+SL    V  +ACG LH+ A T+ G VYTWGC+DDGA+GR+G+E                                           KEGK + ++ +++    RKQ RP L+  L+ + ++R G S NL    D  V SWG+GE G+LGR ++ E+++         K +Y++  ++++HL P+P+ + G   L  VKAIG G  HS+  ++ N  ++S GLNNYGQLG+G+  N   LQ VE L  K +  V GG H+S+ L+   G ++ FGR+DS QLG+         G  +  P  V   +    +  V  V  V+ G    LA+T SN++++WG+G+M  LG+   +     DE  PR +D+S+A                E+L V+ G QHS VLARV
Sbjct:   32 FPRASTQVLKARRIVTVKPTSRAQEAARQLAALNRAFVANLKAQWTHNKRESWEQNMKEYLNYAREIDAKFGARYGQILTFGSGDCGQLGHGVEMDDDLMAKVPRVVHSLAKLKVARVACGGLHSAAITASGEVYTWGCDDDGALGRDGDENVPTKVGMFGPQDAIAIQVVGGDCHTAVVTLAGEVYTWGCYRDKEGKQWCDARSAKDAFKRKQTRPFLIKALDNIADVRCGSSFNLVRTNDGRVYSWGLGEMGQLGREVDAEMKD--------AKGDYKVDMVYRDHLQPKPVML-GKDPLPVVKAIGCGSYHSLFAVSANGYLYSCGLNNYGQLGIGNTDNSSELQLVEDLSSKNVAFVDGGTHHSVVLTN-DGDVYTFGRADSGQLGVLES---CCTGEFKDRPQKVTISSHNKSSSSV--VRMVTSGSNHVLALTESNEIFSWGYGDMFALGNGVDR-----DENKPRQLDWSKAISGKDKEGKDQQFGKAEILLVEAGGQHSAVLARV 524          
BLAST of NO18G00960 vs. NCBI_GenBank
Match: XP_008606627.1 (hypothetical protein SDRG_02803 [Saprolegnia diclina VS20] >EQC40153.1 hypothetical protein SDRG_02803 [Saprolegnia diclina VS20])

HSP 1 Score: 287.0 bits (733), Expect = 1.500e-73
Identity = 184/504 (36.51%), Postives = 258/504 (51.19%), Query Frame = 0
Query:   81 ATPSTLASRRLVKPKKLDRRKEYLEAVKALNQRFHAWVVDQVKHNPGVSLAENALEYLSYVSQLDTRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVNPRVVYSLRGKNVCNIACGALHNVAATSDGRVYTWGCNDDGAVGREGNE-AFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGKMFFNSATSEREILRKQERPMLLPGLERVREIRSGVSSNLALLADSTVLSWGIGESGELGRAINLELRENAEDVEEGEKPEYELYRIWKEHLTPRPMQVEGGGYLAGVKAIGAGYNHSMVVMAVNAEVWSTGLNNYGQLGLGHQTNQKLLQHVEALDGKGITEVTGGAHYSMALSGPTGKLFAFGRSDSSQLGI--GREGGVLSAGASESLPVPVQFPAVEAKTGKVPFVTAVSCGGTFNLAVTASNQVYTWGFGEMGQLGHRPAKGEEAVDEPVPRPIDFSQAAXXXXXXXXXFEVLKVDGGAQHSVVLA 582
            A+   + SRR+V  +  +R++       ALNQ F+  +  Q   N   S  +N  EYL+YV +++ RY  K G + TFGS +CGQ  HG     D++V  PRVV +L  + +  + CG LH  A T DG VYTWGCNDDGA+GR G+E A                                        KEGK++ ++AT +     KQ  P  +PGL  + +I  G S NLA  AD  V SWG+GE G+LGR ++ ++R            EY+L  ++ +HL P  + + G   L   KAIG G  HS+ +      +++TGLNNYGQLGLGH  NQ   Q VEAL  K    V  G H S+ L    G +++FGR+DS QLG     E G +     E +        V+AK+G+V F   +SCG   +LAVT+ N +Y WG+G+M  LG     GEE  DE  PR +D+++             +L+V+ G QHS ++A
Sbjct:   33 ASDDVMRSRRVVTARSTERKRH----AYALNQNFYQGIKLQHAQNAKGSWVDNMAEYLAYVQEIEGRYGDKSGVIMTFGSGDCGQLGHGVDEDKDMIVSVPRVVAALSKQQIVRVGCGGLHTAAVTKDGNVYTWGCNDDGALGRTGDENAPALVTGFPANTSIINVVGGDCHSVALGVDGSVFMWGSYKDKEGKLWCDAATPKETFKNKQLTPFRIPGLSNIVDIDCGSSFNLARAADGHVFSWGLGEMGQLGRPVSDKIR--------APSGEYDLPLVFNQHLKPALVLLNGKKLLC--KAIGCGSYHSLFIANETGGIYTTGLNNYGQLGLGHDANQIEPQLVEALSHKVGQAVAAGTHNSLVLMA-DGTMYSFGRADSGQLGTIDNPETGAMKESPQEII--------VKAKSGRVSF-AKISCGSNHSLAVTSENDLYAWGYGDMCALG----TGEEK-DEYKPRLVDWTKTKFGPA------RILQVNAGGQHSAIVA 501          
BLAST of NO18G00960 vs. NCBI_GenBank
Match: XP_008912457.1 (hypothetical protein PPTG_16624 [Phytophthora parasitica INRA-310] >ETI36877.1 hypothetical protein F443_17123 [Phytophthora parasitica P1569] >ETK77046.1 hypothetical protein L915_16651 [Phytophthora parasitica] >ETL30477.1 hypothetical protein L916_16556 [Phytophthora parasitica] >ETL83739.1 hypothetical protein L917_16378 [Phytophthora parasitica] >ETM36910.1 hypothetical protein L914_16484 [Phytophthora parasitica] >ETN02420.1 hypothetical protein PPTG_16624 [Phytophthora parasitica INRA-310] >ETO65552.1 hypothetical protein F444_17155 [Phytophthora parasitica P1976] >ETP06721.1 hypothetical protein F441_16983 [Phytophthora parasitica CJ01A1] >ETP34759.1 hypothetical protein F442_16982 [Phytophthora parasitica P10297])

HSP 1 Score: 285.0 bits (728), Expect = 5.600e-73
Identity = 179/513 (34.89%), Postives = 260/513 (50.68%), Query Frame = 0
Query:   77 SFQRATPSTLASRRLVKPKKLDRRKEYLEAVKALNQRFHAWVVDQVKHNPGVSLAENALEYLSYVSQLDTRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVNPRVVYSLRGKNVCNIACGALHNVAATSDGRVYTWGCNDDGAVGREGNEAF--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGKMFFNSATSEREILRKQERPMLLPGLERVREIRSGVSSNLALLADSTVLSWGIGESGELGRAINLELRENAEDVEEGEKPEYELYRIWKEHLTPRPMQVEGGGYLAGVKAIGAGYNHSMVVMAVNAEVWSTGLNNYGQLGLGHQTNQKLLQHVEALDGKGITEVTGGAHYSMALSGPTGKLFAFGRSDSSQLGIGREGGVLSAGASESLPVPVQFPAVEAKTGKVPFVTAVSCGGTFNLAVTASNQVYTWGFGEMGQLGHRPAKGEEAVDEPVPRPIDFSQA-----AXXXXXXXXXFEVLKVDGGAQHSVVLAR 583
            SF RA    L +RR+V      R +E    + ALN+ F + V  Q  HN   S  +N  EYLSY  ++D ++    G++ TFGS +CGQ  HG     D+++  PRVV  L    +  +ACG LH+ A TS G VYTWGCNDDGA+G  G+E                                           KEGK + ++ +++    +KQ  P L+  L+ + ++R G S NL    D  V SWG+GE G+LGR ++ +++++        K +Y++  ++ EHL P+P+ + G   L  VKAIG G  HS+  ++ N  ++S GLNNYGQLG+G   N   LQ VE L  K +  V GGAH+S+ L+   G ++ FGR+DS QLG        + G  +  P  V  P  + K G    V  V+ G    LA+T SN +++WG+G+M  LG+   +     DE  P  +D+S+A                E L+V+ G QHS VLAR
Sbjct:   31 SFPRAPTQVLKARRIVTATPTSRTQEAARQLAALNRAFVSNVKAQWAHNKADSWVQNMKEYLSYAREIDAKFGAHAGQMLTFGSGDCGQLGHGVEDEEDLMIKFPRVVSPLAKLQIVRVACGGLHSAAITSAGEVYTWGCNDDGALGHLGDENIPAKVAGFGPQQATAVQVVGGDCHTAVVTLAGKVYTWGCYRDKEGKQWCDAPSAKDAFKKKQPEPFLIKSLDNIADVRCGSSFNLVRTNDGRVYSWGLGEMGQLGRIVDDKMKDS--------KGDYKVDMVYTEHLQPKPVML-GNNPLPAVKAIGCGSYHSLFSLSSNGYLYSCGLNNYGQLGIGSTENCTELQLVEDLSSKNVAYVDGGAHHSVVLTN-DGDVYTFGRADSGQLGTLE---TCNTGEFKDRPQKVTIP--KPKNGGSSEVRMVASGSNHALALTESNAIFSWGYGDMLALGNGVDR-----DENKPYQVDWSKAILGKDKEGEEEEFGKAEFLQVEAGGQHSAVLAR 523          
BLAST of NO18G00960 vs. NCBI_GenBank
Match: KUF90081.1 (Regulator of chromosome condensation [Phytophthora nicotianae])

HSP 1 Score: 283.5 bits (724), Expect = 1.600e-72
Identity = 178/513 (34.70%), Postives = 259/513 (50.49%), Query Frame = 0
Query:   77 SFQRATPSTLASRRLVKPKKLDRRKEYLEAVKALNQRFHAWVVDQVKHNPGVSLAENALEYLSYVSQLDTRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVNPRVVYSLRGKNVCNIACGALHNVAATSDGRVYTWGCNDDGAVGREGNEAF--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGKMFFNSATSEREILRKQERPMLLPGLERVREIRSGVSSNLALLADSTVLSWGIGESGELGRAINLELRENAEDVEEGEKPEYELYRIWKEHLTPRPMQVEGGGYLAGVKAIGAGYNHSMVVMAVNAEVWSTGLNNYGQLGLGHQTNQKLLQHVEALDGKGITEVTGGAHYSMALSGPTGKLFAFGRSDSSQLGIGREGGVLSAGASESLPVPVQFPAVEAKTGKVPFVTAVSCGGTFNLAVTASNQVYTWGFGEMGQLGHRPAKGEEAVDEPVPRPIDFSQA-----AXXXXXXXXXFEVLKVDGGAQHSVVLAR 583
            SF R     L +RR+V      R +E    + ALN+ F + V  Q  HN   S  +N  EYLSY  ++D ++    G++ TFGS +CGQ  HG     D+++  PRVV  L    +  +ACG LH+ A TS G VYTWGCNDDGA+G  G+E                                           KEGK + ++ +++    +KQ  P L+  L+ + ++R G S NL    D  V SWG+GE G+LGR ++ +++++        K +Y++  ++ EHL P+P+ + G   L  VKAIG G  HS+  ++ N  ++S GLNNYGQLG+G   N   LQ VE L  K +  V GGAH+S+ L+   G ++ FGR+DS QLG        + G  +  P  V  P  + K G    V  V+ G    LA+T SN +++WG+G+M  LG+   +     DE  P  +D+S+A                E L+V+ G QHS VLAR
Sbjct:   31 SFPRTPTQVLKARRIVTATPTSRTQEAARQLAALNRAFVSNVKAQWAHNKADSWVQNMKEYLSYAREIDAKFGAHAGQMLTFGSGDCGQLGHGVEDEEDLMIKFPRVVSPLAKLQIVRVACGGLHSAAITSAGEVYTWGCNDDGALGHLGDENIPAKVAGFGPQQATAVQVVGGDCHTAVVTLAGKVYTWGCYRDKEGKQWCDAPSAKDAFKKKQPEPFLIKSLDNIADVRCGSSFNLVRTNDGRVYSWGLGEMGQLGRIVDDKMKDS--------KGDYKVDMVYTEHLQPKPVML-GNNPLPAVKAIGCGSYHSLFSLSSNGYLYSCGLNNYGQLGIGSTENCTELQLVEDLSSKNVAYVDGGAHHSVVLTN-DGDVYTFGRADSGQLGTLE---TCNTGEFKDRPQKVTIP--KPKNGGSSEVRMVASGSNHALALTESNAIFSWGYGDMLALGNGVDR-----DENKPYQVDWSKAILGKDKEGEEEEFGKAEFLQVEAGGQHSAVLAR 523          
BLAST of NO18G00960 vs. NCBI_GenBank
Match: XP_009837588.1 (hypothetical protein H257_12165 [Aphanomyces astaci] >ETV72802.1 hypothetical protein H257_12165 [Aphanomyces astaci])

HSP 1 Score: 280.8 bits (717), Expect = 1.000e-71
Identity = 187/504 (37.10%), Postives = 256/504 (50.79%), Query Frame = 0
Query:   80 RATPSTLASRRLVKPKKLDRR-KEYLEAVKALNQRFHAWVVDQVKHNPGVSLAENALEYLSYVSQLDTRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVNPRVVYSLRGKNVCNIACGALHNVAATSDGRVYTWGCNDDGAVGREGNEAF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGKMFFNSATSEREILRKQERPMLLPGLERVREIRSGVSSNLALLADSTVLSWGIGESGELGRAINLELRENAEDVEEGEKPEYELYRIWKEHLTPRPMQVEGGGYLAGVKAIGAGYNHSMVVMAVNAEVWSTGLNNYGQLGLGHQTNQKLLQHVEALDGKGITEVTGGAHYSMALSGPTGKLFAFGRSDSSQLGIGREGGVLSAGASESLPVPVQFPAVEAKTGKVPFVTAVSCGGTFNLAVTASNQVYTWGFGEMGQLGHRPAKGEEAVDEPVPRPIDFSQAAXXXXXXXXXFEVLKVDGGAQHSVVLA 582
            +A+   +  RR+VK      R  E      ALNQ F+  +  Q   N   S  EN  EYLSY  ++D RY   +G + TFGS +CGQ  HG     D+ V  PR V +L    +  +ACG LH +A T +G V+TWGCNDDGA+GR G+E                                          KEGK++ +  +      +KQ  P L+P L  V +++SG S NLA  AD  V SWG+GE G LGR ++ E+R+           EY+L  ++ +HLTP+ +++ G  +  G KA+GAG  HS+ V   +  ++S GLNNYGQLGLGH  NQ  LQ VEAL  K    V GG H+S+ L    G L+ FGR DS QLG   + G    GA +  P  ++ P V   TG      AV+CG    LAVT  + +Y+WG+G+M  LG+   K     DE  PR ID+++            ++L+V  G QHS V+A
Sbjct:   33 KASDEVMRGRRVVKAVVASTRLTELKRHTYALNQSFYQGIKLQSSQNAKESWLENMKEYLSYAQEIDGRYGDHRGVLLTFGSGDCGQLGHGVEEDIDMCVKFPRPVQALSMHRIARVACGGLHTMALTHEGSVFTWGCNDDGALGRIGDENLPGQVTGFPEGTTIVTIVGGDCHTTAVAVDGSVFTWGSYKDKEGKLWCDGPSPNDTFKKKQLTPYLVPTLANVVDVKSGSSHNLARCADGHVYSWGLGEMGNLGRPVSTEIRD--------AHGEYKLSVVFNDHLTPQLVKLNGKPF--GCKALGAGSYHSLFVANDSGGIYSCGLNNYGQLGLGHDVNQTELQLVEALGSKNGLFVEGGTHHSVVLV-TDGTLYTFGRGDSGQLGTLDDPG---TGAFKDSPQEIKVPGV---TG----FRAVACGSNHALAVTDQDAIYSWGYGDMLALGNGVEK-----DELKPRRIDWTKTKFGAA------KILQVAAGGQHSAVVA 504          
BLAST of NO18G00960 vs. NCBI_GenBank
Match: OQR93933.1 (regulator of chromosome condensation (RCC1), partial [Thraustotheca clavata])

HSP 1 Score: 278.1 bits (710), Expect = 6.800e-71
Identity = 183/506 (36.17%), Postives = 257/506 (50.79%), Query Frame = 0
Query:   77 SFQRATPSTLASRRLVKPKKLDRRKEYLEAVKALNQRFHAWVVDQVKHNPGVSLAENALEYLSYVSQLDTRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVNPRVVYSLRGKNVCNIACGALHNVAATSDGRVYTWGCNDDGAVGREGNEAF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGKMFFNSATSEREILRKQERPMLLPGLERVREIRSGVSSNLALLADSTVLSWGIGESGELGRAINLELRENAEDVEEGEKPEYELYRIWKEHLTPRPMQVEGGGYLAGVKAIGAGYNHSMVVMAVNAEVWSTGLNNYGQLGLGHQTNQKLLQHVEALDGKGITEVTGGAHYSMALSGPTGKLFAFGRSDSSQLGIGREGGVLSAGASESLPVPVQFPAVEAKTGKVPFVTAVSCGGTFNLAVTASNQVYTWGFGEMGQLGHRPAKGEEAVDEPVPRPIDFSQAAXXXXXXXXXFEVLKVDGGAQHSVVLA 582
            SF +A+   + SRR+V   +   RK +     ALNQ F+  +  Q   N   S  EN  EYLSYV +++ RY  K G VF FGS +CGQ  HG     D++V  PRVV +L  + +  + CG LH  A T +G VYTWGCNDDGA+GR  +E F                                        KEGK++ ++ T +     KQ  P  +PGL  + +I+ G S NLA  AD  V SWG+GE G+LGR ++ ++R+           EY+L  ++  HL P  + + G   L   KAIG G  HS+ V + +  +++TGLNNYGQLGLGH  NQ   Q VE L  K    V G  H S+ L    G L++FGR+DS QL      G +   A+ ++    Q   V+ K  ++ F   ++CG    LAV++ N +Y+WG+G+M  LG     GE+  DE  PR +D+++              L+VD G QHS +LA
Sbjct:   28 SFSKASSDIIRSRRIVSATRTTERKRH---AYALNQSFYQGIKLQHLQNAKGSWIENMKEYLSYVQEIEGRYGDKSGVVFAFGSGDCGQLGHGVDEDEDMIVSVPRVVAALEKEQIVRVGCGGLHTAAVTKNGAVYTWGCNDDGALGRTEDENFPGLVSGFPGNTSIINVVGGDCHTVALAVDGSVFMWGSYKDKEGKLWCDAPTPKETFKNKQLTPYNIPGLANIVDIKCGSSFNLARAADGHVFSWGLGEMGQLGRPVSQKIRD--------ASGEYDLPLVFNHHLKPALVLLNGKKLLC--KAIGCGSYHSLFVASESGGIYTTGLNNYGQLGLGHDVNQVEPQLVETLSHKVGLAVEGMTHSSVVLMA-DGTLYSFGRADSGQL------GTIDNPATGAMKESPQEIIVKDKGVRLVF-EKLACGSNHALAVSSKNNIYSWGYGDMSALG----TGEDK-DEYKPRLVDWTKTKFGPA------RTLQVDAGGQHSAILA 501          
BLAST of NO18G00960 vs. NCBI_GenBank
Match: XP_008873128.1 (hypothetical protein H310_08971 [Aphanomyces invadans] >ETV98253.1 hypothetical protein H310_08971 [Aphanomyces invadans])

HSP 1 Score: 275.0 bits (702), Expect = 5.800e-70
Identity = 178/507 (35.11%), Postives = 252/507 (49.70%), Query Frame = 0
Query:   77 SFQRATPSTLASRRLVKPKKLDRRKEYLEAVK-ALNQRFHAWVVDQVKHNPGVSLAENALEYLSYVSQLDTRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVNPRVVYSLRGKNVCNIACGALHNVAATSDGRVYTWGCNDDGAVGREGNEAF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGKMFFNSATSEREILRKQERPMLLPGLERVREIRSGVSSNLALLADSTVLSWGIGESGELGRAINLELRENAEDVEEGEKPEYELYRIWKEHLTPRPMQVEGGGYLAGVKAIGAGYNHSMVVMAVNAEVWSTGLNNYGQLGLGHQTNQKLLQHVEALDGKGITEVTGGAHYSMALSGPTGKLFAFGRSDSSQLGIGREGGVLSAGASESLPVPVQFPAVEAKTGKVPFVTAVSCGGTFNLAVTASNQVYTWGFGEMGQLGHRPAKGEEAVDEPVPRPIDFSQAAXXXXXXXXXFEVLKVDGGAQHSVVLA 582
            SF +A+   +  RR+ K      R   L+    ALNQ F+  +  Q   N   S  EN  EYLSY  ++D RY   +G + TFGS +CGQ  HG     D+ V  PR + +L    +  +ACG LH +A T +G V+TWGCNDDGA+GR G+E                                          KEGK++ +  T +    +KQ  P LLP L  V +I+ G S NLA  AD  V SWG+GE G LGR + +E+R+           EY +  ++ +HLTP+ ++  G  +  G +A+GAG  HS+ V   +  +++ GLNNYGQLGLGH  NQ  LQ VEAL  K    V GG H+S+ L    G ++ FGR DS QLG   +      G  +  P  +Q P V+          +++CG    LAV+  + +Y+WG+G+M  LG+   K     DE  PR +D+++             +L+V  G QHS V+A
Sbjct:   30 SFAKASDDVMRDRRVAKAVASSTRLSELKRHSYALNQSFYQGIKLQSSQNGKGSWLENMKEYLSYAQEIDGRYGDHRGVLLTFGSGDCGQLGHGVEEEVDMCVKFPRPIQALSMHRIVRVACGGLHTMALTHEGSVFTWGCNDDGALGRVGDENLPGPVTGFPDNTTIVNIVGGDCHTAAVTADGSVFTWGSYKDKEGKLWCDGPTPKDTFKKKQMTPYLLPTLANVVDIKCGSSHNLARCADGHVYSWGLGEMGNLGRPVAMEIRD--------ADGEYNVSLVFNDHLTPQLVKFNGKSF--GCRALGAGSYHSLFVANESGGIYTCGLNNYGQLGLGHDVNQTELQLVEALSSKNGLLVEGGTHHSVVLVS-DGTIYTFGRGDSGQLGTLDDP---CTGVFKDSPQEIQVPGVKG-------FRSIACGSNHALAVSDQDTIYSWGYGDMLALGNGVEK-----DELKPRRLDWAKTKFGDA------RILQVSAGGQHSAVVA 504          
BLAST of NO18G00960 vs. NCBI_GenBank
Match: XP_012204958.1 (hypothetical protein SPRG_10442 [Saprolegnia parasitica CBS 223.65] >KDO24365.1 hypothetical protein SPRG_10442 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 274.2 bits (700), Expect = 9.800e-70
Identity = 175/476 (36.76%), Postives = 244/476 (51.26%), Query Frame = 0
Query:   81 ATPSTLASRRLVKPKKLDRRKEYLEAVKALNQRFHAWVVDQVKHNPGVSLAENALEYLSYVSQLDTRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVNPRVVYSLRGKNVCNIACGALHNVAATSDGRVYTWGCNDDGAVGREGNE-AFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGKMFFNSATSEREILRKQERPMLLPGLERVREIRSGVSSNLALLADSTVLSWGIGESGELGRAINLELRENAEDVEEGEKPEYELYRIWKEHLTPRPMQVEGGGYLAGVKAIGAGYNHSMVVMAVNAEVWSTGLNNYGQLGLGHQTNQKLLQHVEALDGKGITEVTGGAHYSMALSGPTGKLFAFGRSDSSQLGI--GREGGVLSAGASESLPVPVQFPAVEAKTGKVPFVTAVSCGGTFNLAVTASNQVYTWGFGEMGQLGHRPAKGEEAVDEPVPRPIDFSQ 554
            A+   + SRR+V  +  +R++       ALNQ F+  +  Q   N   S  +N  EY++YV +++ RY  K G + TFGS +CGQ  HG     D++V  PRVV +L  + +  + CG LH  A T DG VYTWGCNDDGA+GR G+E A                                        KEGK++ ++AT +     KQ  P  +PGL  + +I  G S NLA  AD  V SWG+GE G+LGR ++ ++R            EY+L  ++ +HL P  + + G   L   KAIG G  HS+ + +    +++TGLNNYGQLGLGH  NQ   Q VEAL  K    V  G H S+ L    G +++FGR+DS QLG     E G +     E +        V+AK G+V F   +SCG   +LAVT+ N VY WG+G+M  LG    K     DE  PR +D+++
Sbjct:   33 ASDDVMRSRRVVTARSTERKRH----AYALNQNFYQGIKLQHAQNAKGSWVDNMAEYMAYVQEIEGRYGDKSGVIMTFGSGDCGQLGHGVDEDEDMIVSVPRVVAALSKQQIVRVGCGGLHTAAVTKDGDVYTWGCNDDGALGRTGDENAPALVTGFPANTSIINVVGGDCHSVALGVDGSVFMWGSYKDKEGKLWCDAATPKETFKNKQLTPFSIPGLSNIVDIDCGSSFNLARAADGHVYSWGLGEMGQLGRPVSDKIR--------APSGEYDLPLVFNQHLKPALVLLNGKKLLC--KAIGCGSYHSLFIASETGGIYATGLNNYGQLGLGHDANQIEPQLVEALSHKVGQAVAAGTHNSLVLMA-DGTMYSFGRADSGQLGTIDNPETGAMKESPQEII--------VKAKGGRVYF-AKISCGSNHSLAVTSENDVYAWGYGDMCALGTGDDK-----DEYKPRLLDWTK 479          
BLAST of NO18G00960 vs. NCBI_GenBank
Match: XP_009520896.1 (hypothetical protein PHYSODRAFT_297207 [Phytophthora sojae] >EGZ25608.1 hypothetical protein PHYSODRAFT_297207 [Phytophthora sojae])

HSP 1 Score: 272.7 bits (696), Expect = 2.900e-69
Identity = 174/512 (33.98%), Postives = 263/512 (51.37%), Query Frame = 0
Query:   78 FQRATPSTLASRRLVKPKKLDRRKEYLEAVKALNQRFHAWVVDQVKHNPGVSLAENALEYLSYVSQLDTRYLRKQGEVFTFGSSECGQCAHG-DRSASDILVVNPRVVYSL--RGKNVCNIACGALHNVAATSDGRVYTWGCNDDGAVGREGNE--AFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGKMFFNSATSEREILRKQERPMLLPGLERVREIRSGVSSNLALLADSTVLSWGIGESGELGRAINLELRENAEDVEEGEKPEYELYRIWKEHLTPRPMQVEGGGYLAGVKAIGAGYNHSMVVMAVNAEVWSTGLNNYGQLGLGHQTNQKLLQHVEALDGKGITEVTGGAHYSMALSGPTGKLFAFGRSDSSQLGIGREGGVLSAGASESLPVPVQFPAVEAKTGKVPFVTAVSCGGTFNLAVTASNQVYTWGFGEMGQLGHRPAKGEEAVDEPVPRPIDFSQAAXXXXXXXXXF---EVLKVDGGAQHSVVLA 582
            F  A P+ L +RR+V      R +E    + ALN+ F   +  Q  HN   S A+N  EY+SY  ++D ++  + G + TFGS +CGQ  HG +    D++V  PRVV  L      +  +ACG LH+   T+ G VYTWGC+DDGA+GR+G+E                                           KEGK + ++ +++    +KQ RP L+  L+ + +++ G + NLA   D  V SWG+GE G+LGR ++ E+++           EY++  ++KEHL P+ + + G   L  VK+IG G  HSM  ++ N  +++ GLNNYGQLG+G   N   LQ VE L  K +  V GG H+S+ L+   G ++ FGR+DS QLG+       S G  +  P  V  P  + K      V  ++ G    LA+T S+ +++WG+G+M QLGH   +     DE  PR +++S A          F   E+L+++ G QHS VLA
Sbjct:   32 FPVAAPNVLRARRIVSATPTSRPQEAARQLAALNRAFVDNIKAQWAHNKADSWAQNMKEYVSYAREIDAKFGARGGHLLTFGSGDCGQLGHGVEGEDEDLMVKFPRVVRPLLKLKLKIARVACGGLHSAVITTAGEVYTWGCSDDGALGRDGDENTPSKVDGFGPEQATAVQIVGGDCHTAVVTLAGRVYMWGCYRDKEGKQWCDAPSAKAAFKQKQTRPFLIKALDNIADVKCGNAFNLARTNDGRVYSWGLGEMGQLGRKVDAEMKD--------ADGEYKVEMVYKEHLQPKLVML-GKDQLPVVKSIGCGSYHSMFALSSNGYLYTCGLNNYGQLGIGSTDNCSELQLVEDLSFKNVAFVDGGEHHSVVLTN-DGDVYTFGRADSGQLGM---LDTCSTGDFKDRPQKVTIP--KPKNSGSNVVRMIATGSNHALALTESDAIFSWGYGDMLQLGHGLDQ-----DENKPRQLNWSNATYGKEGKNKKFGEAEILQIEAGGQHSAVLA 523          
The following BLAST results are available for this feature:
BLAST of NO18G00960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23332.13.100e-21774.75Regulator of chromosome condensation/beta-lactamas... [more]
XP_024583630.13.100e-7635.09FOG: RCC1 domain [Plasmopara halstedii] >CEG47261.... [more]
XP_008606627.11.500e-7336.51hypothetical protein SDRG_02803 [Saprolegnia dicli... [more]
XP_008912457.15.600e-7334.89hypothetical protein PPTG_16624 [Phytophthora para... [more]
KUF90081.11.600e-7234.70Regulator of chromosome condensation [Phytophthora... [more]
XP_009837588.11.000e-7137.10hypothetical protein H257_12165 [Aphanomyces astac... [more]
OQR93933.16.800e-7136.17regulator of chromosome condensation (RCC1), parti... [more]
XP_008873128.15.800e-7035.11hypothetical protein H310_08971 [Aphanomyces invad... [more]
XP_012204958.19.800e-7036.76hypothetical protein SPRG_10442 [Saprolegnia paras... [more]
XP_009520896.12.900e-6933.98hypothetical protein PHYSODRAFT_297207 [Phytophtho... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR064ncniR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003950NSK003950Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G00960.1NO18G00960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|560665gene_9551Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100053g39gene7146Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G00960.1NO18G00960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G00960 ID=NO18G00960|Name=NO18G00960|organism=Nannochloropsis oceanica|type=gene|length=2353bp
AACAAAAGCACACGCCTACGAATCACAGCATCATGAGCAAGCGCCAGCGA
GAGGACGGGCAGCTCAGCAAGGAGGCTTACTACGAAGAAGCTGAGTACCC
CTATGGTTCCTCTTACTCGTCCTCTGCTTCCCTGTACTCTCGTGGAGGGG
GGATGGTCGGGTTGGGGGGCAGCACTGCTGCTGCTGGCGGTGGTAGTGGT
GGCGGTGGTAGCATGGTGACAGCCGCATCACCGCCGCCACACTCGATGTC
CTCGTCTTTGTCCTTTCAACGGGCCACGCCCTCCACCTTGGCGTCCCGGC
GACTGGTCAAGCCCAAGAAGCTTGATCGCCGCAAGGAGTACCTGgtacgc
ccgttttgtttggctccatttcttccaagctcgcttttctttgtccaact
gtgtgcacagaagctagacattcccactcactcctccactgtgtgtcatt
aaaacatacagGAGGCAGTCAAAGCCCTAAACCAGCGTTTCCACGCCTGG
GTTGTGGACCAGGTGAAACATAACCCTGGGGTCAGCTTGGCCGAGAACGC
GTTAGAGTACTTGAGCTACGTAAGCCAGCTTGACACCCGGTACCTGCGCA
AGCAAGGAGAGGTTTTTACGgtacgtgtgacaggatcggtggtagtcggt
gggccgggagagtggttggtatgtgctgttggcttcgtgtcttcttcctt
ctctctctcccttcctctctgcgtcgtccacattaatctgcccaagtgca
cctttcctatcgtggaaatcatatcgttcacttactgtcaaggaagaatg
tgaagagtgtaattcaccctctctcacaccgtctcttccccctcccttct
tccctccctccctccctccctctccttttagTTCGGCTCCAGCGAATGTG
GCCAGTGTGCGCACGGAGACCGCTCCGCCTCGGACATCCTGGTCGTGAAC
CCCAGGGTCGTCTACTCCCTGCGCGGGAAAAACGTGTGCAACATCGCATG
TGGCGCCCTGCACAATGTGGCGGCTACGTCCGACGGCCGTGTCTACACGT
GGGGATGTAATGACGATGGCGCCGTGGGTCGGGAGGGGAATGAAGCATTC
CCTATGCTTGTCCCGGATATCCGGCATGAGACTGTGATTGGTGTGGCCGC
TGGGGATAGCCATTCGTTGGTGATGACTTTGGAGGGGAGTGTGTACGGGT
GGGGCTGCTATAAAGACAAGGAGGGCAAAATGTTCTTCAACAGCGCCACG
TCTGAGCGAGAGATTTTGAGGAAGCAAGAGCGGCCCATGCTTTTGCCTGG
GTTGGAAAGGGTACGTGAGATCAGGTCGGGCGTCTCGAGCAATTTGGCGC
TCTTGGCGGACTCGACGGTTCTGTCTTGGGGGATAGGGGAAAGTGGAGAG
CTAGGGAGGGCTATCAACCTGGAACTGCGGGAGAATGCGGAGGACGTGGA
GGAGGGAGAGAAACCAGAGTATGAGCTTTATCGGATTTGGAAGGAGCACT
TGACCCCACGGCCGATGCAGGTGGAGGGGGGTGGATATCTAGCGGGGGTG
AAGGCGATCGGGGCGGGCTATAACCACAGCATGGTGGTTATGGCCGTGAA
CGCCGAAGTCTGGTCAACGGGTTTGAACAATTATGGACAGCTGGGATTGG
GGCACCAGACGAATCAGAAGCTGTTGCAGCACGTGGAGGCGTTGGACGGC
AAGGGGATCACGGAAGTGACGGGTGGGGCGCATTATTCCATGGCCCTGAG
TGGACCGACAGGGAAGCTCTTTGCGTTTGGACGCTCTGACTCGTCCCAGT
TGGGGATAGGGCGGGAAGGAGGAGTCCTGAGTGCCGGGGCGTCGGAGTCC
TTGCCAGTGCCGGTCCAATTTCCTGCTGTAGAAGCCAAAACGGGCAAGGT
GCCGTTTGTGACGGCGGTTTCTTGCGGAGGTACGTTTAATTTGGCCGTCA
CTGCGAGCAACCAGGTGTATACGTGGGGCTTTGGTGAGATGGGGCAATTG
GGTCACCGTCCGGCCAAGGGGGAGGAGGCAGTGGACGAACCTGTTCCGCG
GCCGATTGATTTTTCTCAAGCGGCGGGGGGGGGAGTGGGGGGAGGGGGAG
GTTTTGAGGTGCTCAAGGTGGATGGAGGCGCGCAGCATAGCGTGGTGTTG
GCGAGGGTGCCAGTGGCGTATCTGGAGGAGGTAAAGCGAAAGTTGGACGA
GGCAGACGCCAAGTATAATAAAAAAATGGAGGAGAAAAGGAGGGTGGCGC
AGCGTCAGGGACAAGGAGAGGAGGAGGAAGGGGACGATTTGGAATTCGAT
GATTTGTGAAAGAACCAATGAAAAGAAAATGATTTGAGGACGCCGTCTTC
TCT
back to top

protein sequence of NO18G00960.1

>NO18G00960.1-protein ID=NO18G00960.1-protein|Name=NO18G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=633bp
MSKRQREDGQLSKEAYYEEAEYPYGSSYSSSASLYSRGGGMVGLGGSTAA
AGGGSGGGGSMVTAASPPPHSMSSSLSFQRATPSTLASRRLVKPKKLDRR
KEYLEAVKALNQRFHAWVVDQVKHNPGVSLAENALEYLSYVSQLDTRYLR
KQGEVFTFGSSECGQCAHGDRSASDILVVNPRVVYSLRGKNVCNIACGAL
HNVAATSDGRVYTWGCNDDGAVGREGNEAFPMLVPDIRHETVIGVAAGDS
HSLVMTLEGSVYGWGCYKDKEGKMFFNSATSEREILRKQERPMLLPGLER
VREIRSGVSSNLALLADSTVLSWGIGESGELGRAINLELRENAEDVEEGE
KPEYELYRIWKEHLTPRPMQVEGGGYLAGVKAIGAGYNHSMVVMAVNAEV
WSTGLNNYGQLGLGHQTNQKLLQHVEALDGKGITEVTGGAHYSMALSGPT
GKLFAFGRSDSSQLGIGREGGVLSAGASESLPVPVQFPAVEAKTGKVPFV
TAVSCGGTFNLAVTASNQVYTWGFGEMGQLGHRPAKGEEAVDEPVPRPID
FSQAAGGGVGGGGGFEVLKVDGGAQHSVVLARVPVAYLEEVKRKLDEADA
KYNKKMEEKRRVAQRQGQGEEEEGDDLEFDDL*
back to top
Synonyms
Publications