NO18G00950, NO18G00950 (gene) Nannochloropsis oceanica

Overview
NameNO18G00950
Unique NameNO18G00950
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2420
Alignment locationchr18:345916..348335 -

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Properties
Property NameValue
DescriptionDrug/metabolite transporter
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:345916..348335 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR000620EamA_dom
Homology
BLAST of NO18G00950 vs. NCBI_GenBank
Match: EWM23301.1 (Drug/metabolite transporter, partial [Nannochloropsis gaditana])

HSP 1 Score: 503.8 bits (1296), Expect = 5.200e-139
Identity = 275/372 (73.92%), Postives = 291/372 (78.23%), Query Frame = 0
Query:   60 PLQAGKTDGGSNNAKVRAFDPLAMVGE------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVALLWGSNFGALKYLDTCGVDVSLLTAMRFALASGALLPFLWGKGMPVFKAGLEVGLWVTLGYITQAIGLETTEASKSAFICSLTVVVVPLIQGLLGKKVMPTTWGACALAVFGVGLLTLQGATGPVIGDLWSLGQPLGFGIAFMRIEHYMKQLPGKAIPLAAAQMVSVFGISTIWAAITTQGFTNTGDLSILSDTPHFLSLLYTGLISSALAVVIESAALEYVSSEETSVIFSTEPLFAAATSAVVLGERLKPTGMLGGLAILGACLLTQVDMTTLVTVLPMLGKAADVSEQ 426
            P  AGK DGG   +KV+ FDPLA+VG                                                     VALLWGSNFGALKYLDTCGVDVSLLT+MRF LAS ALLPFLWGKGMPV KAGLEVGLWVTLGYITQAIGLETTEASKSAFICSLTVVVVPLIQGLLGKK+ PTTW AC LAV GVGLLTLQGATGPVIGDLWSLGQPLGFGIAFMRIEHYMKQLPGKAIPLAAAQM+SVFG+S +WAA+TT  F NTGDLSIL DTPHFLSLLYTGLISSALAVVIESAALEYVSSEETS+IFSTEPLFAAATSAVVLGERLKP+G+LGG  IL ACLLTQVD+T+L TVLP+L + AD   Q
Sbjct:   11 PCLAGKMDGG-GGSKVQTFDPLALVGRKNKGRASSTTSSSGTTSLLERQESLEGELEEGVSLEGTDEKDNTIYKAMLVVVALLWGSNFGALKYLDTCGVDVSLLTSMRFLLASVALLPFLWGKGMPVLKAGLEVGLWVTLGYITQAIGLETTEASKSAFICSLTVVVVPLIQGLLGKKIAPTTWTACGLAVLGVGLLTLQGATGPVIGDLWSLGQPLGFGIAFMRIEHYMKQLPGKAIPLAAAQMISVFGVSAVWAAVTTGMFQNTGDLSILFDTPHFLSLLYTGLISSALAVVIESAALEYVSSEETSIIFSTEPLFAAATSAVVLGERLKPSGILGGFVILSACLLTQVDLTSLATVLPILSRVADEGSQ 381          
BLAST of NO18G00950 vs. NCBI_GenBank
Match: XP_005853998.1 (hypothetical protein NGA_0480100 [Nannochloropsis gaditana CCMP526] >EKU22367.1 hypothetical protein NGA_0480100 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 499.2 bits (1284), Expect = 1.300e-137
Identity = 259/293 (88.40%), Postives = 272/293 (92.83%), Query Frame = 0
Query:  133 VALLWGSNFGALKYLDTCGVDVSLLTAMRFALASGALLPFLWGKGMPVFKAGLEVGLWVTLGYITQAIGLETTEASKSAFICSLTVVVVPLIQGLLGKKVMPTTWGACALAVFGVGLLTLQGATGPVIGDLWSLGQPLGFGIAFMRIEHYMKQLPGKAIPLAAAQMVSVFGISTIWAAITTQGFTNTGDLSILSDTPHFLSLLYTGLISSALAVVIESAALEYVSSEETSVIFSTEPLFAAATSAVVLGERLKPTGMLGGLAILGACLLTQVDMTTLVTVLPMLGKAADVSEQ 426
            VALLWGSNFGALKYLDTCGVDVSLLT+MRF LAS ALLPFLWGKGMPV KAGLEVGLWVTLGYITQAIGLETTEASKSAFICSLTVVVVPLIQGLLGKK+ PTTW AC LAV GVGLLTLQGATGPVIGDLWSLGQPLGFGIAFMRIEHYMKQLPGKAIPLAAAQM+SVFG+S +WAA+TT  F NTGDLSIL DTPHFLSLLYTGLISSALAVVIESAALEYVSSEETS+IFSTEPLFAAATSAVVLGERLKP+G+LGG  IL ACLLTQVD+T+L TVLP+L + AD   Q
Sbjct:   73 VALLWGSNFGALKYLDTCGVDVSLLTSMRFLLASVALLPFLWGKGMPVLKAGLEVGLWVTLGYITQAIGLETTEASKSAFICSLTVVVVPLIQGLLGKKIAPTTWTACGLAVLGVGLLTLQGATGPVIGDLWSLGQPLGFGIAFMRIEHYMKQLPGKAIPLAAAQMISVFGVSAVWAAVTTGMFQNTGDLSILFDTPHFLSLLYTGLISSALAVVIESAALEYVSSEETSIIFSTEPLFAAATSAVVLGERLKPSGILGGFVILSACLLTQVDLTSLATVLPILSRVADEGSQ 365          
BLAST of NO18G00950 vs. NCBI_GenBank
Match: XP_005827424.1 (hypothetical protein GUITHDRAFT_88716 [Guillardia theta CCMP2712] >EKX40444.1 hypothetical protein GUITHDRAFT_88716 [Guillardia theta CCMP2712])

HSP 1 Score: 200.7 bits (509), Expect = 9.300e-48
Identity = 119/284 (41.90%), Postives = 169/284 (59.51%), Query Frame = 0
Query:  133 VALLWGSNFGALKYLDTCGVDVSLLTAMRFALASGALLPFLWGKGMPVFKAGLEVGLWVTLGYITQAIGLET-TEASKSAFICSLTVVVVPLIQGLLGKKVMPTTWGACALAVFGVGLLTLQGATGPVIGDLWSLGQPLGFGIAFMRIEHYMKQLPGKAIPLAAAQMVSVFGISTIWAAITTQGFTNTGDLS-ILSDTPHFLSLLYTGLISSALAVVIESAALEYVSSEETSVIFSTEPLFAAATSAVVLGERLKPTGMLGGLAILGACLLTQVDMTTLVTVLP 415
            VA L+G+NFG++K +    +D S+   +RF LA  AL PFL      + K G+E+GLWV +GY+ Q IGL T  +AS +AF+CSL VV+ PL+    G+ V   +W A ALAVFGVG+L + G + P IGDLW+L QP+GFG+ F +IE  M+  PGK   L A Q+V V+    IWA +   G  +   ++  LS  P  +S+++TGLI++AL V+++                STEP++ AA +  VLGE +     +GG  I+ ACL + VD T L  V P
Sbjct:    2 VAALYGTNFGSIKIMQE-ALDPSVAAILRFTLALAALSPFLKTVPRDMIKPGVEIGLWVAMGYVVQGIGLNTGADASTAAFLCSLAVVICPLLDLFAGETVKAKSWIAAALAVFGVGVLEIGGTSQPSIGDLWALAQPIGFGMGFWKIEKVMRNFPGKGPQLTAIQLVVVWLTGLIWALVDNGGLPDVATVTESLSQMPVAVSVVWTGLITTALTVLLQXXXXXXXXXXXXXXXXSTEPIWGAAFAHAVLGEAIGMNTWVGGSLIIAACLCSSVDTTGLQEVTP 284          
BLAST of NO18G00950 vs. NCBI_GenBank
Match: XP_005841807.1 (hypothetical protein GUITHDRAFT_149872 [Guillardia theta CCMP2712] >EKX54827.1 hypothetical protein GUITHDRAFT_149872 [Guillardia theta CCMP2712])

HSP 1 Score: 190.7 bits (483), Expect = 9.700e-45
Identity = 117/279 (41.94%), Postives = 165/279 (59.14%), Query Frame = 0
Query:  133 VALLWGSNFGALKYLDTCGVDVSLLTAMRFALASGALLPFLWGKGMPVFKAGLEVGLWVTLGYITQAIGLETTEASKSAFICSLTVVVVPLIQGLLGKKVMPTTWGACALAVFGVGLLTLQGATGPVIGDLWSLGQPLGFGIAFMRIEHYMKQLPGKAIPLAAAQMVSVFGISTIWAAITT------QGFTNTGDLSILSDTPHFLSLLYTGLISSALAVVIESAALEYVSSEETSVIFSTEPLFAAATSAVVLGERLKPTGMLGGLAILGACLLTQVD 406
            VA L+G+NFG++K L++  +D S    +RF +AS A+LP L    +   K GLE+G++  LGY  Q IGL+T  AS  AF+CSL VVV PL+  L G ++    W +  LA+ G  +L L GA  P  GDLW+L QPL FG  F R E  M++LP +A PL A Q+++V  +S +W    T       G      L    D    L+LL+TG+ ++A+ V +E+ AL  ++S ET+V+F+TEPL+  A +  VLGE++     LGG  IL ACL   VD
Sbjct:   20 VAALYGTNFGSVKILES-SLDPSAAAFVRFGIASLAMLPLLKNLRVETIKPGLEIGMFAFLGYFAQGIGLQTCHASTMAFLCSLAVVVCPLLDVLEGSRLGAKAWTSVGLAIAGTAVLELAGADMPGTGDLWALIQPLAFGAGFWRCERVMRELPDQAAPLTAMQILTVGMMSMMWMVSDTVMHPGSAGHVMQEILHSFHDGHLLLALLWTGIATTAITVGLETWALGKLTSAETTVLFATEPLWGTAFAHAVLGEQVGSNAYLGGTLILAACLFRVVD 297          
BLAST of NO18G00950 vs. NCBI_GenBank
Match: CEM03567.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 189.5 bits (480), Expect = 2.200e-44
Identity = 115/279 (41.22%), Postives = 172/279 (61.65%), Query Frame = 0
Query:  133 VALLWGSNFGALKYL-----DTCGVDVSLLTAMRFALASGALLPFLWGKGMPVFKAGLEVGLWVTLGYITQAIGLETTEASKSAFICSLTVVVVPLIQGLLGKKVMPTTWGACALAVFGVGLLTLQGATGPVIGDLWSLGQPLGFGIAFMRIEHYMKQLPGKAIPLAAAQMVSVFGISTIWAAITTQGF-TNTGDLSILSDTPHFL-SLLYTGLISSALAVVIESAALEYVSSEETSVIFSTEPLFAAATSAVVLGERLKPTGMLGGLAILGACLLTQV 405
            +  LW SNF  +K       +   V+ S+  A RF++A+ AL PFL G  +     G E GL++ LGYI QA+ L TT A+K+AFICSL VV V L+  +L + +  +  GA  LAV GVG+L L+GA  PV GDL++L QP+ FG++++R+    +   G A+ ++AAQ+  V   S IWAA+ + G  T    L+ L   P  L S+ YTGLI+++L++++++ A   V   + SVI S+EPLFAA  S ++LGE L  +  LGG  I+ AC+L+++
Sbjct:  133 MTFLWASNFPVIKLALGGGEEVAAVEPSVYAAGRFSIAALALSPFLLGAPIGALLGGAECGLYIALGYIGQALALATTTANKAAFICSLQVVFVVLVSSVLKRHLDRSALGAALLAVAGVGVLELRGARAPVEGDLFALAQPVFFGLSYIRLGKVSRNFKGSAVAISAAQVAVVGLCSLIWAAVQSGGLDTMLASLAPLWQQPPLLTSIAYTGLITTSLSIILQTQAFSKVKPTDASVIISSEPLFAAMLSVLLLGESLGQSNFLGGALIIAACILSEL 411          
BLAST of NO18G00950 vs. NCBI_GenBank
Match: XP_002183994.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44663.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 184.5 bits (467), Expect = 6.900e-43
Identity = 124/311 (39.87%), Postives = 175/311 (56.27%), Query Frame = 0
Query:  134 ALLWGSNFGALKYLDTCGVDVSLLTAMRFALASGALLPFLWGKGMP------------------VFKAGLEVGLWVTLGYITQAIGLETTEASKSAFICSLTVVVVPLIQGLLGKKVMPTTWGACALAVFGVGLLTLQGATGP----VIGDLWSLGQPLGFGIAFMRIEHYMKQLPGKAIPLAAAQMVSVFGISTIWAAITTQGFTNTGDLSI-LSDTPHFLSLLYTGLISSALAVVIESAALEYVSSEETSVIFSTEPLFAAATSAVVLGERLKPTGMLGGLAILGACLLTQVDMTTLVTVLPMLGKAAD 422
            A L+G+NF  +K L    + V +  A+RF +A+ A  P+L+ K  P                     AGLEVG W ++GY+ QA+GL TT ASKSAFICSL VVVVPL+  L GK ++P       +A+ GV +L L G +        GD  SL QP+ FGIAF R+E  M++ P +A    AAQ++ VF +S  +   T  G  N   L   LSDT    SL +TG IS+AL V +E+ AL+ +S+ ET++IFSTEPL+  A +A+++GE L     +G + IL  C+ + + +  L  +LP   K  D
Sbjct:  179 AALYGTNFSLVKLLGETDLPVGVSGALRFGMAALATSPWLFAKAKPNDDGTLPTTGSDMSVEMAATMAGLEVGFWNSIGYMAQAVGLATTAASKSAFICSLAVVVVPLLDFLAGKLLLPRQTVGAFMALAGVAILELGGMSAADFTLTFGDAASLLQPICFGIAFWRMEAAMQRFPNEANRSTAAQLLMVFLVSLTFGLFTDPGAFNVAQLQAWLSDTNILASLFWTGCISTALTVYMETLALKTLSAAETTLIFSTEPLWGTAFAALIMGETLGWESAVGAVLILSGCVFSNLGIQGLRNLLPGSDKPDD 489          
BLAST of NO18G00950 vs. NCBI_GenBank
Match: OLP83389.1 (hypothetical protein AK812_SmicGene35847 [Symbiodinium microadriaticum])

HSP 1 Score: 176.8 bits (447), Expect = 1.400e-40
Identity = 109/280 (38.93%), Postives = 163/280 (58.21%), Query Frame = 0
Query:  133 VALLWGSNFGALKYLDT-CGVDVSLLTAMRFALASGALLPFLWGKGMP-VFKAGLEVGLWVTLGYITQAIGLETTEASKSAFICSLTVVVVPLIQGLLGKKVMPTTWGACALAVFGVGLLTLQGATGPVIGDLWSLGQPLGFGIAFMRIEHYMKQLPGKAIPLAAAQMVSVFGISTIWAAITTQGFTNTGDLS-ILSDTPHFLSLLYTGLISSALAVVIESAALEYVSSEETSVIFSTEPLFAAATSAVVLGERLKPTGMLGGLAILGACLLTQVDMTTL 410
            + +LW +NF  +K +    GV   +    RF +A+G L P++     P V    +E G W+  GYI QA+GL TT ASKS FIC+L VV V LI G+  KK  P T  A ALAV GVG L L G+   VIGDL SL  P+GFG+ ++R+E  M + P  A+P+ A ++  V   S  + A+T    T + DL  +L+ +     +LYTGL+++ LA+V+ES A  ++ +   SVIF+TEPL+AA  +  ++ E       +GG  ++GA ++ ++   +L
Sbjct:  104 LCMLWATNFAVIKEITAQPGVTTQMYAVSRFTVAAGLLSPWISQASSPKVLARAVECGAWIAFGYIGQAVGLMTTTASKSCFICTLNVVFVSLIVGITKKKFDPQTVMAAALAVTGVGFLELAGSQQFVIGDLISLAMPVGFGMGYIRLEEIMAENPKDALPVTAVKLGVVAAASWAYYALT----TGSPDLEPVLASSTALTGILYTGLVTTGLALVVESVAFRFIDATSASVIFTTEPLWAAIFAVWLINEPFSAVDAIGGALVIGANVIKELPEESL 379          
BLAST of NO18G00950 vs. NCBI_GenBank
Match: WP_018467616.1 (EamA family transporter [Meiothermus timidus])

HSP 1 Score: 166.8 bits (421), Expect = 1.500e-37
Identity = 104/270 (38.52%), Postives = 160/270 (59.26%), Query Frame = 0
Query:  135 LLWGSNFGALKYLDTCGVDVSLLTAMRFALASGALLPFLWGKGMPVFKAGLEVGLWVTLGYITQAIGLETTEASKSAFICSLTVVVVPLIQGLLGKKVMPTTWGACALAVFGVGLLTLQGATGPVIGDLWSLGQPLGFGIAFMRIEHYMKQLPGKAIPLAAAQMVSVFGISTIWAAITTQGFTNTGDLSILSDTPHFLSLLYTGLISSALAVVIESAALEYVSSEETSVIFSTEPLFAAATSAVVLGERLKPTGMLGGLAILGACLLTQV 405
            LLWG+ F  +K      +  S +T  RF +A+   +PF+      V+ AGLE+GL++ LGY TQAIGLE T AS+SAFI +L VV++P+  GL+G K+    W A  +A+ GVGLL+  G+  P +GDLW+LG  L +     R+EH++       +P+   QM  V  +S +W A     +    D + L     +  +LY GL+++AL V +++     VS+ E ++ F+ EP++AA  +  +LGERL   G++GGL ILGA L++Q+
Sbjct:   17 LLWGTTFVVIKQ-SLESLSPSQITLARFVVAALCFVPFVLRLERKVWLAGLELGLYLWLGYATQAIGLEYTTASRSAFITTLYVVILPMFLGLIGYKLRLPVWVAAVMAIVGVGLLSYDGSP-PNLGDLWTLGTALAYTFYIWRLEHFVAVRSYPTLPITGVQMFGVALLSGVWVAWERPAW----DWATLP----YAEILYLGLVATALCVWLQALGQRTVSAPEAAIAFTLEPVYAAIFAFFILGERLGIQGLVGGLLILGATLVSQL 276          
BLAST of NO18G00950 vs. NCBI_GenBank
Match: GAQ80885.1 (hypothetical protein KFL_000650180 [Klebsormidium nitens])

HSP 1 Score: 166.8 bits (421), Expect = 1.500e-37
Identity = 108/289 (37.37%), Postives = 166/289 (57.44%), Query Frame = 0
Query:  133 VALLWGSNFGALKYLDTCGVDVSLLTAMRFALASGALLPFLWG--KGMPVFKAGLEVGLWVTLGYITQAIGLETTEASKSAFICSLTVVVVPLIQGLLGKKVMPTTWGACALAVFGVGLLTLQGATGPVIGDLWSLGQPLGFGIAFMRIEHYMKQLPGK-AIPLAAAQMVSVFGISTIWAAITTQGFTNTGDLSILS--------------DTPHFLSLLYTGLISSALAVVIESAALEYVSSEETSVIFSTEPLFAAATSAVVLGERLKPTGMLGGLAILGACLLTQV 405
            +  L+GSN   LK   T  +D +   A RF + S A  P+LW   +   + KAG E+GLW ++ Y+TQA+ L+T++A + +FI + TV+VVPL+ GL GKK+ P TW + A A+ GVGLL   GA  P IGD+W+L   + FG+  +R EH+ + L  + ++ L   QM      S  WA I   G  ++GDL++L+                  +  +LYTG+ ++AL + IE  +L  VS+ E +++++ EPL+ A  + ++LGER  P G LG   ILG  + TQ+
Sbjct:  262 LTFLYGSNVSVLKNSATL-LDPATFAAGRFGIGSIAFGPWLWKALRDPRIRKAGGELGLWASIAYLTQALALQTSDAGRVSFISTFTVIVVPLLAGLFGKKISPLTWVSAAAALAGVGLLESSGAP-PAIGDVWALLSAVLFGVQMLRTEHHSRSLRKEDSMALIGLQMTVTAAASAAWALI---GHLHSGDLTVLNALFAGDVGTLAQGLQGVPWWPMLYTGVFTTALCLWIEVVSLHDVSATEAALVYTIEPLWGAGFAWLLLGERWGPMGWLGAALILGGSMTTQL 545          
BLAST of NO18G00950 vs. NCBI_GenBank
Match: WP_027893761.1 (EamA family transporter [Meiothermus chliarophilus])

HSP 1 Score: 166.4 bits (420), Expect = 2.000e-37
Identity = 101/270 (37.41%), Postives = 156/270 (57.78%), Query Frame = 0
Query:  135 LLWGSNFGALKYLDTCGVDVSLLTAMRFALASGALLPFLWGKGMPVFKAGLEVGLWVTLGYITQAIGLETTEASKSAFICSLTVVVVPLIQGLLGKKVMPTTWGACALAVFGVGLLTLQGATGPVIGDLWSLGQPLGFGIAFMRIEHYMKQLPGKAIPLAAAQMVSVFGISTIWAAITTQGFTNTGDLSILSDTPHFLSLLYTGLISSALAVVIESAALEYVSSEETSVIFSTEPLFAAATSAVVLGERLKPTGMLGGLAILGACLLTQV 405
            LLWG+ F  +K      +  S +T  RFA+A+   +PF+      V+ AGLE+G ++ LGY TQA+GLE T AS+SAFI +L VV++P+  GL+G K+    W A  +A+ GVGLL+  G+  P +GDLW+LG  L +     R+EH++       +P+   QM  V  +S +W A     +           T  +  +LY GLI++A+ V +++     V + E ++ F+ EP++AA  +  +LGERL   G+ GGL ILGA L++Q+
Sbjct:   17 LLWGTTFVVIKQ-SLESLSASQITLARFAVAALCFVPFVLRLERKVWLAGLELGFYLWLGYATQAVGLEYTTASRSAFITTLYVVILPIFLGLIGHKLRLPVWAAALMAIVGVGLLSYDGSP-PNVGDLWTLGTALAYTFYIWRLEHFVAVRSYPTLPITGVQMFGVALLSGVWVAWERPAWNWA--------TLPYAEMLYLGLIATAICVWLQALGQRTVPAPEAAIAFTLEPVYAAILAYFLLGERLGVQGLAGGLLILGATLVSQL 276          
The following BLAST results are available for this feature:
BLAST of NO18G00950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23301.15.200e-13973.92Drug/metabolite transporter, partial [Nannochlorop... [more]
XP_005853998.11.300e-13788.40hypothetical protein NGA_0480100 [Nannochloropsis ... [more]
XP_005827424.19.300e-4841.90hypothetical protein GUITHDRAFT_88716 [Guillardia ... [more]
XP_005841807.19.700e-4541.94hypothetical protein GUITHDRAFT_149872 [Guillardia... [more]
CEM03567.12.200e-4441.22unnamed protein product [Vitrella brassicaformis C... [more]
XP_002183994.16.900e-4339.87predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OLP83389.11.400e-4038.93hypothetical protein AK812_SmicGene35847 [Symbiodi... [more]
WP_018467616.11.500e-3738.52EamA family transporter [Meiothermus timidus][more]
GAQ80885.11.500e-3737.37hypothetical protein KFL_000650180 [Klebsormidium ... [more]
WP_027893761.12.000e-3737.41EamA family transporter [Meiothermus chliarophilus... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR064ncniR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003948NSK003948Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G00950.1NO18G00950.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|609128gene_9552Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101051g3gene7148Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G00950.1NO18G00950.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G00950 ID=NO18G00950|Name=NO18G00950|organism=Nannochloropsis oceanica|type=gene|length=2420bp
CAGCAGCAGgttatacaaggtagcttttcgttctccttgacgcctcgtcc
caacccggcccgtgcaagtgtccgcctcttacgacccctctgtcaacata
ttttcgcaagcatagctcaatagacctgcagcgctaagtaaaaagtacac
aaatcagatatatcatgtctcctacaagcagttctgtcaccctggtcatg
aggagcagcggcagcaacagaagCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAACAGCAGCAACAGCGGAAGGAAAAGGAAAGCCC
CCCGCTGTCTCACCACCACCACGGCAGCAGCAGCGGCCGTGGGGCTGCTC
TGTATGGCTAGCGCACCGCAAGGTGTGTTGTCTTTCGCACCTGCGGCATT
CGGTCCTCACGCCACCAGCAGCAGCACGGCGAGAATACATGCCTTCTCTT
CTTCTTCTTTCAACGCTTATCTTGACAGAAGCAGCAGCAGGCCGCACCCT
TTCTCGCAGCCACAACAACTATCCATAGTTCCCTTGCAAGCCGGCAAGAC
TGACGGAGGGAGTAACAACGCCAAAGTACGGGCTTTCGACCCTTTGGCCA
TGGTGGGGGAAAAGAAAAAAAGCAGCACCAGCACGGCACTGTTAGAAAAA
GGGAGCAAAGATGTCGTTACTGAAGCAGCAGGGGGAGGTCTGGTTGACGA
AGAGGAGGAAAAGCCTGACAATGGCATATACAAGGCGATGCTTGTAGTGG
TAGCCCTCTTATGGGGATCTAATTTCGGGGCTCTTAAATACCTCGACACT
TGCGGGGTGGACGTCTCGCTGCTCACTGCCATGCGGTTCGCCCTGGCTTC
GGGCGCGTTACTCCCTTTCCTGTGGGGGAAAGGTATGCCTGTCTTCAAAG
CCGGCCTTGAGGTCGGGTTGTGGGTTACCCTTGGATACATTACACAGGCT
ATCGGCCTCGAGACCACTGAGGCGTCCAAGTCAGCTTTTATCTGCTCCCT
GACCGTGGTGGTAGTCCCCCTCATCCAGGGCTTGCTGGGCAAGAAAGTCA
TGCCCACAACATGGGGTGCTTGCGCACTGGCCGTCTTTGGGGTGGGGTTG
TTGACGTTACAGGGGGCCACGGGACCGGTTATAGGGGACTTATGGTCGTT
AGGACAGCCGTTGGGGTTTGGAATTGCATTTATGCGGATCGAACATTACA
TGAAGCAACTGCCAGGGAAGGCTATCCCGTTGGCAGCAGCCCAAATGGTG
TCGGTGTTCGGGATCTCCACCATATGGGCGGCGATAACGACGCAGGGGTT
TACCAACACCGGGGATTTGTCGATTTTGTCCGATACGCCCCATTTCTTGT
CCTTGCTGTACACGGGCCTGATCTCTTCGGCCTTGGCGGTGGTGATTGAG
AGTGCAGCGCTGGAGTACGTGTCGAGTGAAGAGACGTCGGTGATATTTTC
GACCGAGCCGTTGTTCGCGGCGGCAACGTCGGCGGTGGTTTTGGGGGAGA
GGCTGAAACCGACCGGCATGCTGGGAGGGCTGGCGATTTTGGGGGCTTGC
TTATTGACACAGGTGGATATGACGACTTTGGTGACGGTGTTGCCCATGCT
GGGGAAGGCGGCAGATGTGAGCGAGCAGGTAAATGAATGAAATTGGACTC
GGCTATCGAGATAAATCAGGATTAATTTAGTTTCTAGGGTGGAGAAGAGA
GAGGCAGGGAGAAATAGACGTCTGTAAGAGTGCGGAGTCGAATGGAAAAT
CTGGTATTAAGAGGAAGACAAAGGAGAGAGACAATGGAAAAAAGTGAGAG
AGTATGTGAGTGGATAACGATTGGGAAATGATAGAAGATGAGTGCTGACC
AAGAGGGAGCAAAAATAAAACCCATGCGAAGAAGCTAGCATGTGTCCCTT
CCCATCCCCGAGCTTTGCGAAGGGATATTGGGAGAGGAGAGAGGGAGAGG
AGGAATGGAAGGGGGGGAGGGGCGGTTTAACTCTCTCCCGTGTAATGATG
TCGTAAGTGCCCCAGCCATACAAGCGTGCAGCGACGATTTAGGGAAGGGG
CTTAATACTCTATTATATAGGTGAAAAAGGATGAGTGGGAAAGAGACACA
AATGACGAGAGGCATAGGGAGGGTTGAGATATTATTAGAAAGCGAAAATG
GGAAGGAGATCGAGTCAAGGAAGAAGACGCATTCATGTTGTGTTAATGTA
TTTTTCTTCTTCTTCTCTCACTCATCTCAGCACCGCCACGCTACACCCCG
CGCACTGACCTCGAGAAAGAAAGCAGAGTTCACCTCCAGAGCTAGAACCT
GAGATGAGATAAGAAGGAAAACAAGGAGAGAGGAAGAGGGAAGGAAAAGT
CGAACGGGCGATGTCCAATAAGGGACAACCGTCTAACTCAAAAAGACCGA
AAAGTGATAGGTGCAACGTG
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protein sequence of NO18G00950.1

>NO18G00950.1-protein ID=NO18G00950.1-protein|Name=NO18G00950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=429bp
MASAPQGVLSFAPAAFGPHATSSSTARIHAFSSSSFNAYLDRSSSRPHPF
SQPQQLSIVPLQAGKTDGGSNNAKVRAFDPLAMVGEKKKSSTSTALLEKG
SKDVVTEAAGGGLVDEEEEKPDNGIYKAMLVVVALLWGSNFGALKYLDTC
GVDVSLLTAMRFALASGALLPFLWGKGMPVFKAGLEVGLWVTLGYITQAI
GLETTEASKSAFICSLTVVVVPLIQGLLGKKVMPTTWGACALAVFGVGLL
TLQGATGPVIGDLWSLGQPLGFGIAFMRIEHYMKQLPGKAIPLAAAQMVS
VFGISTIWAAITTQGFTNTGDLSILSDTPHFLSLLYTGLISSALAVVIES
AALEYVSSEETSVIFSTEPLFAAATSAVVLGERLKPTGMLGGLAILGACL
LTQVDMTTLVTVLPMLGKAADVSEQVNE*
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Synonyms
Publications