NO18G00940, NO18G00940 (gene) Nannochloropsis oceanica

Overview
NameNO18G00940
Unique NameNO18G00940
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2137
Alignment locationchr18:343779..345915 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:343779..345915 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO18G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR064ncniR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G00940.1NO18G00940.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO18G00940.2NO18G00940.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G00940.1NO18G00940.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO18G00940.2NO18G00940.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G00940 ID=NO18G00940|Name=NO18G00940|organism=Nannochloropsis oceanica|type=gene|length=2137bp
GAGAGAGGTCGACAGAAAAGATGTGAGTGATGTGGGAATTGATCATGCCG
GCATGTTCATATGTTGTTCGGAAGGCACTTCAGGTAATCTCCCTTTTCAG
GTCGTGGGCGGAATGGAAGCGACAGCTACGATGACAACGAGGTCTTTTAT
CCATGCCAGCCCCAGAGCCAATGACGAACAAATACCTAATGGAGAAATAC
AAAATAGTGGGGATTGAGTGAAAAGAGACCTGGGCACACACGGCCTGCCA
AAGTGTGCTGTGGATCGGCGCACCCCCCGCCTCGGGGTGTGTGTGTGTGT
GTGTGACGGTGCGAGCTCCGGAGGAGGCTCCCCGCCTGACTGAGTTTCAA
AGCACCAACAAATGTGCCTGCATGTTCGCAGCAGCCCAGCCATGGTTTGG
CAAGTGGGCGCTAAACATGCACCTTCCATAGCAACGATCCATGAAGTGCA
ATCAAGAATAGCAATAGCGTTCCGTTCCGAGGGCCGCGCTCGGTTGTGCC
TGGAGCGCGATCCCCATCCTTTTGTCTCCAGACAGCAAGTAGGCGGCACA
ACTTACACAAAGTGAATGCAAGTTAGAGTACGGTAAGCTGGTGGCCTCCC
TTTTATTGAAGGCAGCGACTTGCCTCAAGCGACCAAGCGCGATACTAGGA
GACACGGCGTGATGTGAGGCCTGTGCATCATCATGATGCTTCTGGTAATG
AGGGGCTCTCTGCGTGCGGCTGTCGTGTCCCTGCTCCCATTGTCTACACC
ATGCGACGCCATGACCTATGGAGAGCATCAGTACGACCACCACAAGCGCG
ACGAGGGAGTTCGAAGGCGGGCTCAAGATGGCGGGACACCACGGAGGGGA
CGTGGCTGGCCTTGCTCTCTTCCTATCCTTCGAATCATGCGTGCAGCACG
GCGGATCGAGCACAAGCCCCCACGACCAACGCCCGCGCGAACCATCACAT
ATCCAGACCAGCACGTCAAGCTTCGCAAGCTGCATCATTGCGTTGGTCGC
ATGCTTGCTGCCGCTCCTCGGCCACTCCTTGCCGTAAATCCTCTTCCCTC
TGGGCGTCGACCTATTCTCATCCTCATCCTCGTCGTCGAGCACACCCTGT
CTCCCCATCACCGCACCGGCTATACAAGCATCACATCTAAGgtaaggacg
ctcaacagaagagaggagagacaaggcagtagaaattccttcaccctcga
aatgcaaaggccgtgatgtattcatatcaacatacgccgttttacctgct
ctatactgcgcctgacagcgtagatgagaagaacttgttgtctgagccta
ctttgcaacccccctcctctcctaatttctgcctccttttgtatttacat
ggaaaaaatgagcagcaggcattgacaacgtcatacattcctccaccaca
cataagcatagATAGCTCTTGGCCAAAGCACCTGCGACAGCTACAGCCAC
GGCTCGATCCTTACAAAGGTAAACTGTTATCCGACGGAGCGGCACCAGGA
CTCGTTCAAACCCGCCTCCTTCTCTGTGTCGTGTCTCCTTTTCTGCGTCT
CAGGTCCTCCCCTTCTTTCTCCTTCCCTTTTTTCGTTGCCTCCCGCCCCT
TTTGCCCCAAGAAAAAGTTGATGACAATTACATTGCTGACTCTAGACGAT
GCCGACAGTGTCTTTGCACACTGCCGCATCATTTGCGAGTTTTTTACAGC
TAGCCTTCAAAGTTCCCTGATTTTTTAACGCATGGTATACTTGAATATCA
CATGGCATGGGGGAGAACGAGGGATGTGAGGAGCAGTGTGTGTGTAGTGT
GTGTGTAGTGTGTGTATGTGTGTATAAAAGCAGGATAGGAGAATAGCGAT
TTCAGTGTACTTGCATACTTTTTTTTCACAGGTTGGATTGATCAACACAT
CTCTTCCCTTCATTATTATTCCATATGCACGGTCTGACAGTCAAATAGCG
CTAAACATTCCAAGGGGAGGGAAAGAATGCGGCGTCTACGTCAGAGAGAT
TTAAAGGGAAAAGAGCAGGAGAAAATTGGAAATTGGAGGAATGCTGTCTA
GTGATGAAGATAAAATCGGGAGGAAAATGGAACAGGGGAAAAGAATAGGG
CAGGGCCTATAAAAGGAAAGGCATGAATTCATGAATT
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protein sequence of NO18G00940.1

>NO18G00940.1-protein ID=NO18G00940.1-protein|Name=NO18G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=156bp
MMLLVMRGSLRAAVVSLLPLSTPCDAMTYGEHQYDHHKRDEGVRRRAQDG
GTPRRGRGWPCSLPILRIMRAARRIEHKPPRPTPARTITYPDQHVKLRKL
HHCVGRMLAAAPRPLLAVNPLPSGRRPILILILVVEHTLSPHHRTGYTSI
TSKHR*
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protein sequence of NO18G00940.2

>NO18G00940.2-protein ID=NO18G00940.2-protein|Name=NO18G00940.2|organism=Nannochloropsis oceanica|type=polypeptide|length=223bp
MMLLVMRGSLRAAVVSLLPLSTPCDAMTYGEHQYDHHKRDEGVRRRAQDG
GTPRRGRGWPCSLPILRIMRAARRIEHKPPRPTPARTITYPDQHVKLRKL
HHCVGRMLAAAPRPLLAVNPLPSGRRPILILILVVEHTLSPHHRTGYTSI
TSKIALGQSTCDSYSHGSILTKVNCYPTERHQDSFKPASFSVSCLLFCVS
GPPLLSPSLFSLPPAPFAPRKS*
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Synonyms
Publications