NO18G00890, NO18G00890 (gene) Nannochloropsis oceanica

Overview
NameNO18G00890
Unique NameNO18G00890
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1778
Alignment locationchr18:333542..335319 +

Link to JBrowse

Properties
Property NameValue
DescriptionBranched-chain amino acid aminotransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:333542..335319 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0009987cellular process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR036038Aminotransferase-like
IPR001544Aminotrans_IV
Homology
BLAST of NO18G00890 vs. NCBI_GenBank
Match: EWM23282.1 (branched-chain amino acid aminotransferase [Nannochloropsis gaditana])

HSP 1 Score: 650.2 bits (1676), Expect = 4.800e-183
Identity = 329/411 (80.05%), Postives = 352/411 (85.64%), Query Frame = 0
Query:   53 SNLLLFSLLPAACAFLLPSSGPARLLHAXXXXXXXXXXXATFHPSCRPPSHLSAAPTAAGETKTTHRAPGTADLDWANLGFEFRQTRSHIKFVWKDGKWSEGELVADPYVKVHIANTGLHYGQAIFEGLKAFAWQDGSVHIFRPQENAKRLRMSAERLLMTPFPEDKFVEAVKRVVADNADFVPPFGTGGSMYIRPLLFGSGARIGLNPADEYTLLILPIPVGDYYKGGLSPVSALVIDDYDRAAPRGVGHVKVAGNYAADLLPNMLGKKKGFPIGLYLDAKTNSYVEEFSTSNFVAIDSKGAFVTPSSPTVLPSITNKSLMELAADMGLEVNVRPIPITEVKTLKEVAACGTAVVVTPVNRIVYKDEVIKIGAEGGGEGGTGPITAKLYARVRAIQQGEEEDKFGWTVKV 464
            S  LLFSLLP + AFL P     +  H            +T  P C    H    P +   T   HRAPGTA+LDWANLGFEFRQTRSHIKFVWK+G+WSEGELVADPYVKVHIANTGLHYGQAIFEGLKAFAWQDGS+ IFRPQENAKRLRMSAERLLMT FPEDKFVEAV+RVVADNAD+VPPFGTGGS+YIRPLLFGSG RIGLNP+DEYTLLI+PIPVGDYYKGGLSPVSALVIDDYDRAAPRGVGHVKVAGNYAADLLPN+LGKKKG+PIGLYLDAKTNS+VEEFSTSNFVAIDS GAFVTP SPTVLPSITNKSLM+LA D GL V  R IPITEVKTL+EVAACGTAVVVTPVNR+VY+DEVIKIG E   +GGTGP+TAKLY+RVRAIQQGE EDKF WTVKV
Sbjct:   14 SVFLLFSLLPTSSAFLTPCRPALQSQH----QLSHPAALSTPSPFC-DRQHDGRLPLSLSATTMAHRAPGTANLDWANLGFEFRQTRSHIKFVWKNGEWSEGELVADPYVKVHIANTGLHYGQAIFEGLKAFAWQDGSIRIFRPQENAKRLRMSAERLLMTAFPEDKFVEAVRRVVADNADYVPPFGTGGSLYIRPLLFGSGPRIGLNPSDEYTLLIMPIPVGDYYKGGLSPVSALVIDDYDRAAPRGVGHVKVAGNYAADLLPNLLGKKKGYPIGLYLDAKTNSFVEEFSTSNFVAIDSSGAFVTPRSPTVLPSITNKSLMDLARDEGLAVQERAIPITEVKTLREVAACGTAVVVTPVNRVVYRDEVIKIGGE---DGGTGPVTAKLYSRVRAIQQGEAEDKFSWTVKV 416          
BLAST of NO18G00890 vs. NCBI_GenBank
Match: XP_005854907.1 (branched-chain amino acid aminotransferase [Nannochloropsis gaditana CCMP526] >EKU21451.1 branched-chain amino acid aminotransferase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 637.1 bits (1642), Expect = 4.200e-179
Identity = 309/346 (89.31%), Postives = 328/346 (94.80%), Query Frame = 0
Query:  118 HRAPGTADLDWANLGFEFRQTRSHIKFVWKDGKWSEGELVADPYVKVHIANTGLHYGQAIFEGLKAFAWQDGSVHIFRPQENAKRLRMSAERLLMTPFPEDKFVEAVKRVVADNADFVPPFGTGGSMYIRPLLFGSGARIGLNPADEYTLLILPIPVGDYYKGGLSPVSALVIDDYDRAAPRGVGHVKVAGNYAADLLPNMLGKKKGFPIGLYLDAKTNSYVEEFSTSNFVAIDSKGAFVTPSSPTVLPSITNKSLMELAADMGLEVNVRPIPITEVKTLKEVAACGTAVVVTPVNRIVYKDEVIKIGAEGGGEGGTGPITAKLYARVRAIQQGEEEDKFGWTVKV 464
            HRAPGTA+LDWANLGFEFRQTRSHIKFVWK+G+WSEGELVADPYVKVHIANTGLHYGQAIFEGLKAFAWQDGS+ IFRPQENAKRLRMSAERLLMT FPED FVEAV+RVVADNAD+VPPFGTGGS+YIRPLLFGSG RIGLNP+DEYTLLI+PIPVGDYYKGGLSPVSALVIDDYDRAAPRGVGHVKVAGNYAADLLPN+LGKKKG+PIGLYLDAKTNS+VEEFSTSNFVAIDS GAFVTP SPTVLPSITNKSLM+LA D GL V  R IPITEVKTL+EVAACGTAVVVTPVNR+VY+DEVIKIG E   +GGTGP+TAKLY+RVRAIQQGE EDKF WTVKV
Sbjct:    3 HRAPGTANLDWANLGFEFRQTRSHIKFVWKNGEWSEGELVADPYVKVHIANTGLHYGQAIFEGLKAFAWQDGSIRIFRPQENAKRLRMSAERLLMTAFPEDNFVEAVRRVVADNADYVPPFGTGGSLYIRPLLFGSGPRIGLNPSDEYTLLIMPIPVGDYYKGGLSPVSALVIDDYDRAAPRGVGHVKVAGNYAADLLPNLLGKKKGYPIGLYLDAKTNSFVEEFSTSNFVAIDSSGAFVTPRSPTVLPSITNKSLMDLARDEGLAVQERAIPITEVKTLREVAACGTAVVVTPVNRVVYRDEVIKIGGE---DGGTGPVTAKLYSRVRAIQQGEAEDKFSWTVKV 345          
BLAST of NO18G00890 vs. NCBI_GenBank
Match: CBN77944.1 (branched chain amino acid aminotransferase [Ectocarpus siliculosus])

HSP 1 Score: 474.6 bits (1220), Expect = 3.600e-130
Identity = 227/354 (64.12%), Postives = 275/354 (77.68%), Query Frame = 0
Query:  110 AAGETKTTHRAPGTADLDWANLGFEFRQTRSHIKFVWKDGKWSEGELVADPYVKVHIANTGLHYGQAIFEGLKAFAWQDGSVHIFRPQENAKRLRMSAERLLMTPFPEDKFVEAVKRVVADNADFVPPFGTGGSMYIRPLLFGSGARIGLNPADEYTLLILPIPVGDYYKGGLSPVSALVIDDYDRAAPRGVGHVKVAGNYAADLLPNMLGKKKGFPIGLYLDAKTNSYVEEFSTSNFVAIDSKGAFVTPSSPTVLPSITNKSLMELAADMGLEVNVRPIPITEVKTLKEVAACGTAVVVTPVNRIVYKDEVIKIGAEGGGEGGTGPITAKLYARVRAIQQGEEEDKFGWTVKV 464
            AA E   T+  PGTAD+DW NLGFE+R   SH+KF +K+G W EGE+V DPYVKVHIANT LHYGQ++FEGLKAF  +DGSV +FRP ENAKR+R SAER+LM P P D F++A K  V  N ++VPP+G+ G++Y+RPLLFG+GARIGL P+DEYTLL++ IPVG+YYKGG  P +A+VI+DYDRAAP+GVG VKVAGNYAAD++PNML K+ G+PIGLYLDAKTN+ VEEFSTSNF A+     FVTP SP VLPSITNKSLM+LA D G+ V  RP+P  EV + KEVAACGTAVV+T + +IV   E+I I    GG   TGP+   LY RVR +Q GE EDKFGW + V
Sbjct:    3 AAPEMPKTN-VPGTADMDWENLGFEYRDVNSHVKFTFKNGAWDEGEMVKDPYVKVHIANTALHYGQSVFEGLKAFHGKDGSVKLFRPDENAKRIRASAERILMEPPPADLFIKACKMAVKANMEYVPPYGSEGALYLRPLLFGTGARIGLQPSDEYTLLVMAIPVGNYYKGGFKPTTAVVIEDYDRAAPKGVGAVKVAGNYAADMMPNMLAKQAGYPIGLYLDAKTNTLVEEFSTSNFFAVTEDNKFVTPDSPAVLPSITNKSLMQLAEDEGMVVEHRPVPFDEVSSFKEVAACGTAVVMTTIKQIVKGGEIISI---NGGSDETGPVCQALYDRVRGVQAGELEDKFGWMMPV 352          
BLAST of NO18G00890 vs. NCBI_GenBank
Match: GAX17454.1 (branched-chain amino acid aminotransferase [Fistulifera solaris])

HSP 1 Score: 434.5 bits (1116), Expect = 4.200e-118
Identity = 219/350 (62.57%), Postives = 265/350 (75.71%), Query Frame = 0
Query:  119 RAPGTADLD--WANLGFEFRQTRSHIKFVWKDGK-WSEGELVADPYVKVHIANTGLHYGQAIFEGLKAFAWQDGSVHIFRPQENAKRLRMSAERLLMTPFPEDKFVEAVKRVVADNADFVPPFGTGGSMYIRPLLFGSGARIGLNPADEYTLLILPIPVGDYYKGGL-SPVSALVIDDYDRAAPRGVGHVKVAGNYAADLLPNMLGKKKGFPIGLYLDAKTNSYVEEFSTSNFVAI-DSKGAFVTPSSPTVLPSITNKSLMELAADMGLEVNVRPIPITEVKTLKEVAACGTAVVVTPVNRIVYKDEVIKIGAEGGGEGGTGPITAKLYARVRAIQQGEEEDKFGWTVKV 464
            + PGTA+LD  W  LGFEFR T SH++  +K+G+ W + ELV +PY+K+HI  T LHYGQA FEGLKAF  +DG+V+IFRP ENAKR++ S +R+ M   P D F++AVK VV DN ++VPP+G+GG++YIRP+LFGSG RIGL PADEYT + L IPVGDYYKGGL SPV  L+I D+DRAAPRGVG  KVAGNYAADLLPNML KK+GFPIGLYLDAKT S +EEFSTSNFV I  +  ++VTP SP+VLPSITNK+LM+LA + G++V  R I I E+    EV A GTAVVVTPV  I   D    I     GEG  GP+T KLY +VRAIQ GE EDK+GW VK+
Sbjct:    6 KKPGTAELDVPWGELGFEFRPTNSHVRVTYKEGEGWGKPELVTEPYIKLHIGATALHYGQACFEGLKAFCHEDGTVNIFRPDENAKRMQASCDRIRMAQMPTDLFIDAVKAVVNDNIEYVPPYGSGGALYIRPILFGSGPRIGLQPADEYTFVCLVIPVGDYYKGGLASPVKGLLITDFDRAAPRGVGAAKVAGNYAADLLPNMLSKKQGFPIGLYLDAKTQSKIEEFSTSNFVGIKHATNSYVTPKSPSVLPSITNKALMQLAEEEGMKVEQRDIDIEELDEFDEVLAVGTAVVVTPVGSITRLDG-DDIKQYKFGEGEIGPVTRKLYDKVRAIQNGEVEDKYGWNVKL 354          
BLAST of NO18G00890 vs. NCBI_GenBank
Match: XP_002178511.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50176.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 430.6 bits (1106), Expect = 6.000e-117
Identity = 229/378 (60.58%), Postives = 271/378 (71.69%), Query Frame = 0
Query:   95 HPSCRPPSHLSAAPTAAGETKTTHRAPGTADLD--WANLGFEFRQTRSHIKFVWKDGK-WSEGELVADPYVKVHIANTGLHYGQAIFEGLKAFAWQDGSVHIFRPQENAKRLRMSAERLLMTPFPEDKFVEAVKRVVADNADFVPPFGTGGSMYIRPLLFGSGARIGLNPADEYTLLILPIPVGDYYKGGL-SPVSALVIDDYDRAAPRGVGHVKVAGNYAADLLPNMLGKKKGFPIGLYLDAKTNSYVEEFSTSNFVAID-SKGAFVTPSSPTVLPSITNKSLMELAADMGLEVNVRPIPITEVKTLKEVAACGTAVVVTPVNRIVYKDEVIKIG----AEGGGEGGTGPITAKLYARVRAIQQGEEEDKFGWTVKV 464
            H   R PS  +AA +A      T + PGTA LD  W  LGFEFR T SHIK  +K+G  W E ELV +PYV +HI  T LHYGQ+ FEGLKAF   D  V++FRP+ENA R++ S ERL+M   P + FV AV  VV DN ++VPP+G+ G++YIRPLLFGSG RIGL PADEYT LIL IPVGDYYKGGL +PV+ L+I D+DRAAPRGVG VKVAGNYAADLLPNML KKKGFPIGLYLD+KT +++EEFSTSNFV ID SK A+VTP SP+VLPSITNKSLM++A D G+ V  R + I E++T  EV A GTAVVVTPV  I   D + + G     E G +   G  T +LY RVRAIQ GE ED  GW  +V
Sbjct:   33 HVKGRSPSSSTAATSALSMAVET-KKPGTAKLDVAWEELGFEFRPTNSHIKITYKEGSGWGEPELVKEPYVNLHIGATALHYGQSCFEGLKAFTHADDEVYVFRPEENAHRMQSSCERLMMPVMPTETFVNAVNTVVKDNIEYVPPYGSNGALYIRPLLFGSGPRIGLQPADEYTFLILVIPVGDYYKGGLATPVNGLLIQDFDRAAPRGVGAVKVAGNYAADLLPNMLSKKKGFPIGLYLDSKTQNFIEEFSTSNFVGIDNSKNAYVTPKSPSVLPSITNKSLMQIAKDEGMTVEARDVTIAELETFDEVLAVGTAVVVTPVGSITRLD-LQEAGDVKRYEFGTKNEIGETTRRLYDRVRAIQNGEAEDVHGWNHRV 408          
BLAST of NO18G00890 vs. NCBI_GenBank
Match: GAX13983.1 (branched-chain amino acid aminotransferase [Fistulifera solaris])

HSP 1 Score: 429.5 bits (1103), Expect = 1.300e-116
Identity = 216/350 (61.71%), Postives = 264/350 (75.43%), Query Frame = 0
Query:  119 RAPGTADLD--WANLGFEFRQTRSHIKFVWKDGK-WSEGELVADPYVKVHIANTGLHYGQAIFEGLKAFAWQDGSVHIFRPQENAKRLRMSAERLLMTPFPEDKFVEAVKRVVADNADFVPPFGTGGSMYIRPLLFGSGARIGLNPADEYTLLILPIPVGDYYKGGL-SPVSALVIDDYDRAAPRGVGHVKVAGNYAADLLPNMLGKKKGFPIGLYLDAKTNSYVEEFSTSNFVAI-DSKGAFVTPSSPTVLPSITNKSLMELAADMGLEVNVRPIPITEVKTLKEVAACGTAVVVTPVNRIVYKDEVIKIGAEGGGEGGTGPITAKLYARVRAIQQGEEEDKFGWTVKV 464
            + PGTA LD  W  LGFEFR T SH++  +K+G+ W + E+V +PY+++HI  T LHYGQA FEGLKAF  +DG+V+IFRP ENAKR++ S +R+ M   P D F++AVK VV DN ++VPP+G+GG++YIRP+LFGSG RIGL PADEYT + L IPVGDYYKGGL SPV  L+I D+DRAAPRGVG  KVAGNYAADLLPNML KK+GFPIGLYLDAKT + +EEFSTSNFV I  +  ++VTP SP+VLPSITNK+LM+LA + G++V  R I I E+    EV A GTAVVVTPV  I   D    I     GEG  GP+T KLY +VRAIQ GE EDK+GW VK+
Sbjct:   43 KKPGTAKLDVPWGELGFEFRPTNSHVRVTYKEGEGWGKPEMVKEPYIQLHIGATALHYGQACFEGLKAFCHEDGTVNIFRPDENAKRMQASCDRIRMAKMPTDLFIDAVKAVVNDNIEYVPPYGSGGALYIRPILFGSGPRIGLQPADEYTFVCLVIPVGDYYKGGLASPVKGLLITDFDRAAPRGVGAAKVAGNYAADLLPNMLSKKQGFPIGLYLDAKTQTKIEEFSTSNFVGIKHATNSYVTPKSPSVLPSITNKALMQLAEEEGMKVEQRDIDIEELDEFDEVLAVGTAVVVTPVGSITRLDG-DDIKQYKFGEGEIGPVTRKLYDKVRAIQNGEVEDKYGWNVKL 391          
BLAST of NO18G00890 vs. NCBI_GenBank
Match: XP_002288882.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94318.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 421.8 bits (1083), Expect = 2.800e-114
Identity = 208/353 (58.92%), Postives = 255/353 (72.24%), Query Frame = 0
Query:  113 ETKTTHRAPGTADLDWANLGFEFRQTRSHIKFVWKDGKWSEGELVADPYVKVHIANTGLHYGQAIFEGLKAFAWQDGSVHIFRPQENAKRLRMSAERLLMTPFPEDKFVEAVKRVVADNADFVPPFGTGGSMYIRPLLFGSGARIGLNPADEYTLLILPIPVGDYYKGGLS-PVSALVIDDYDRAAPRGVGHVKVAGNYAADLLPNMLGKKKGFPIGLYLDAKTNSYVEEFSTSNFVAIDSKG-AFVTPSSPTVLPSITNKSLMELAADMGLEVNVRPIPITEVKTLKEVAACGTAVVVTPVNRIVYKDEVIKIGAEGGGEGGTGPITAKLYARVRAIQQGEEEDKFGWTVKV 464
            +  T   APGTADL W+ LGFEFR T+SH++ ++KDGKW E ELV  PY+ VHI  T LHYGQA FEGLKAFA  DGSV++FRP ENAKR+  S+ R++M   P + F++A   VV DN  +VPP+G+GG++Y+RPLLFGSG RIGL PA+EYT ++L IPVGDYYKGGL+ PV+ L++DDYDRAAP+GVG  KVAGNYAADL+PNM  KKKGFPI LYLDA T+S +EEFSTSNF+ ID+    +VTP SP+VLPSITNKSL  +A D G+ V  R I I+E+    EV ACGTAVVVTPV  +   D   +   +       G  T +LY  VR+IQ GE ED   W  KV
Sbjct:   54 DVSTDIGAPGTADLPWSELGFEFRPTKSHLRMIYKDGKWGEAELVESPYINVHIGATALHYGQACFEGLKAFAHDDGSVYMFRPDENAKRINASSGRVMMPEIPVETFIKACNDVVKDNIAYVPPYGSGGALYLRPLLFGSGPRIGLQPAEEYTFIVLVIPVGDYYKGGLAKPVNGLIVDDYDRAAPKGVGAAKVAGNYAADLVPNMEAKKKGFPICLYLDAATHSKIEEFSTSNFIGIDNDNKKYVTPRSPSVLPSITNKSLQTIAKDEGMTVEQREISISELSEFDEVVACGTAVVVTPVGSLTRFDASGEETEKFQFSEDVGITTRRLYDTVRSIQNGEVEDTHSWNFKV 406          
BLAST of NO18G00890 vs. NCBI_GenBank
Match: CEM06352.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 412.5 bits (1059), Expect = 1.700e-111
Identity = 203/372 (54.57%), Postives = 258/372 (69.35%), Query Frame = 0
Query:   92 ATFHPSCRPPSHLSAAPTAAGETKTTHRAPGTADLDWANLGFEFRQTRSHIKFVWKDGK-WSEGELVADPYVKVHIANTGLHYGQAIFEGLKAFAWQDGSVHIFRPQENAKRLRMSAERLLMTPFPEDKFVEAVKRVVADNADFVPPFGTGGSMYIRPLLFGSGARIGLNPADEYTLLILPIPVGDYYKGGLSPVSALVIDDYDRAAPRGVGHVKVAGNYAADLLPNMLGKKKGFPIGLYLDAKTNSYVEEFSTSNFVAIDSKG-AFVTPSSPTVLPSITNKSLMELAADMGLEVNVRPIPITEVKTLKEVAACGTAVVVTPVNRIVYKDEVIKIGAEGGGEGGTGPITAKLYARVRAIQQGEEEDKFGWTV 462
            A   P  R    ++   T      T     GTA+LDW  L FE+  T  +  + +   K W +G +  +PY+ +H+  T LHYGQA FEGLKAF  +DG V +FRP +NA+RL+ SAERL+M P PE+ F+ A ++ V  N  +VPP+GTGGS+Y+RP+L GS  RIG+ PA+EYT  ++ IPVGDYYKGGL PVSA V++ YDRAAP+GVG  KVAGNYAADLLPN +GK KGFPI LYLDAK N Y++EFSTSNF+A+   G  +VTP SP++LPSITN SLMELA D GL+   RP+PI EV +  EVAACGTAV++TP++RIV+KD+   +    G     GP+  +LY RVR IQ GEE DKFGW V
Sbjct:   32 AFLSPLPRLSKEINRRRTPFRAVATEESLVGTANLDWEALRFEYLPTDGYCVYRYTAEKGWDDGRMEQEPYISLHVGATALHYGQAAFEGLKAFHCKDGKVRMFRPLDNARRLQRSAERLMMPPVPENIFIYACRQAVLANLAYVPPYGTGGSLYLRPVLIGSSPRIGVQPAEEYTFFVMVIPVGDYYKGGLQPVSAWVVEGYDRAAPQGVGAYKVAGNYAADLLPNSIGKSKGFPIALYLDAKENRYIDEFSTSNFIAVTQDGNTYVTPESPSILPSITNLSLMELAKDEGLDTQRRPVPIEEVGSFSEVAACGTAVIITPIDRIVHKDKTYVVRGPDGRP--VGPVFERLYRRVRGIQYGEEADKFGWMV 401          
BLAST of NO18G00890 vs. NCBI_GenBank
Match: OSX71900.1 (hypothetical protein BU14_0491s0008 [Porphyra umbilicalis])

HSP 1 Score: 405.6 bits (1041), Expect = 2.100e-109
Identity = 200/345 (57.97%), Postives = 247/345 (71.59%), Query Frame = 0
Query:  121 PGTADLDWANLGFEFRQTRSHIKFVWKDGKWS-EGELVADPYVKVHIANTGLHYGQAIFEGLKAFAWQDGSVHIFRPQENAKRLRMSAERLLMTPFPEDKFVEAVKRVVADNADFVPPFGTGGSMYIRPLLFGSGARIGLNPADEYTLLILPIPVGDYYKGGLSPVSALVIDDYDRAAPRGVGHVKVAGNYAADLLPNMLGKKKGFPIGLYLDAKTNSYVEEFSTSNFVAIDSKGAFVTPSSPTVLPSITNKSLMELAADMGLEVNVRPIPITEVKTLKEVAACGTAVVVTPVNRIVYKDEVIKIGAEGGGEGG-TGPITAKLYARVRAIQQGEEEDKFGWTVKV 464
            P + DLDWA LGF+FR T  +++  ++DG WS + ELVA+PY+K+HI  T LHYG + FEGLKAF   DG V +FRP ENAKR+  SA RLL+   P D F+ A K  V +N +FVPP+GTGGS+Y+RPLLFGSG +IGL+PADE+T L+L  PVGDYY GG +PV+A+V  DYDRAAPRGVGHVK AGNYAADLLPN L K+ G+PI LY+DA     VEEF TSNFV +     +VTP SP+VLPS+TNK+L  LA D G+ V  R + I EV   +EVAACGTAVV+T V R+VYK +VI +GA  G +    GP  ++LY +VR IQ GE  D  GW   V
Sbjct:   82 PASKDLDWATLGFQFRPTNCYVRHTYRDGAWSTKPELVAEPYIKLHIGATALHYGASCFEGLKAFRTADGRVSLFRPDENAKRMASSAARLLIPEVPADLFLSACKAAVRENVEFVPPYGTGGSLYVRPLLFGSGPKIGLSPADEFTFLVLVTPVGDYYAGGPAPVTAIVTTDYDRAAPRGVGHVKCAGNYAADLLPNTLAKRAGYPINLYVDAADQRSVEEFGTSNFVGLIG-NTYVTPDSPSVLPSVTNKTLATLAEDAGMVVERRTVDIGEVGEFEEVAACGTAVVITAVTRVVYKGDVITVGAGRGSDPEVVGPRFSELYKQVRGIQYGEIADPHGWCFDV 425          
BLAST of NO18G00890 vs. NCBI_GenBank
Match: XP_004365631.1 (branched-chain amino acid aminotransferase [Capsaspora owczarzaki ATCC 30864] >KJE89250.1 branched-chain amino acid aminotransferase [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 392.5 bits (1007), Expect = 1.800e-105
Identity = 194/330 (58.79%), Postives = 241/330 (73.03%), Query Frame = 0
Query:  131 LGFEFRQTRSHIKFVWKDGKWS-EGELVADPYVKVHIANTGLHYGQAIFEGLKAFAWQDGSVHIFRPQENAKRLRMSAERLLMTPFPEDKFVEAVKRVVADNADFVPPFGTGGSMYIRPLLFGSGARIGLNPADEYTLLILPIPVGDYYKGGLSPVSALVIDDYDRAAPRGVGHVKVAGNYAADLLPNMLGKKKGFPIGLYLDAKTNSYVEEFSTSNFVAIDSKGAFVTPSSPTVLPSITNKSLMELAADMGLEVNVRPIPITEVKTLKEVAACGTAVVVTPVNRIVYKDEVIKIGAEGGGEGGTGPITAKLYARVRAIQQGEEEDKFGW 460
            LGF+F QT  H+++VW++GKWS + EL A PYV+VHIA T LHYGQ++FEGLKAF  +DG V +FRP  NA R+  SAERL+M   P D F+ A++R +  NADF+P +  GGS+YIRP+LFGSGAR+   PADEYT ++  +PVGDYY  G S V+ALV+ D DRAAP GVGHVK AGNYAA +   +  KKKG+P+ LYLD   + Y++EFSTSNFVAID+ G +VTP S TVLPSITN SLM+L ADMG+ V  R I I EV    EVAACGTAVV++PVNRIV   +VI IG         GPI  +LY R++AIQ+G+E D FGW
Sbjct:    8 LGFDFVQTNGHVQYVWRNGKWSDDAELQASPYVRVHIAATALHYGQSVFEGLKAFRCRDGRVRVFRPDRNAARMAESAERLMMPVVPTDVFIAAIERCIRANADFIPSYEHGGSLYIRPILFGSGARVPPEPADEYTFIVYVVPVGDYY-AGTSAVTALVVRDADRAAPLGVGHVKAAGNYAASMESTLSSKKKGYPLSLYLDPLHHKYIDEFSTSNFVAIDANGHYVTPESRTVLPSITNASLMQLCADMGIPVERRQIAIEEVARFAEVAACGTAVVLSPVNRIVTDADVISIGTL-----TIGPIMKRLYDRLKAIQRGDEPDPFGW 331          
The following BLAST results are available for this feature:
BLAST of NO18G00890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23282.14.800e-18380.05branched-chain amino acid aminotransferase [Nannoc... [more]
XP_005854907.14.200e-17989.31branched-chain amino acid aminotransferase [Nannoc... [more]
CBN77944.13.600e-13064.12branched chain amino acid aminotransferase [Ectoca... [more]
GAX17454.14.200e-11862.57branched-chain amino acid aminotransferase [Fistul... [more]
XP_002178511.16.000e-11760.58predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX13983.11.300e-11661.71branched-chain amino acid aminotransferase [Fistul... [more]
XP_002288882.12.800e-11458.92predicted protein [Thalassiosira pseudonana CCMP13... [more]
CEM06352.11.700e-11154.57unnamed protein product [Vitrella brassicaformis C... [more]
OSX71900.12.100e-10957.97hypothetical protein BU14_0491s0008 [Porphyra umbi... [more]
XP_004365631.11.800e-10558.79branched-chain amino acid aminotransferase [Capsas... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR064ncniR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003939NSK003939Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G00890.1NO18G00890.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|609149gene_9558Nannochloropsis oceanica (N. oceanica CCMP1779)gene
BCAT1gene7157Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G00890.1NO18G00890.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G00890 ID=NO18G00890|Name=NO18G00890|organism=Nannochloropsis oceanica|type=gene|length=1778bp
GCTTGGTCCAATCAATCATTGCTGTGCGCATGATGCAAGACCTCACAAAA
AGCCACGCACTAGCAATATGCACTTGAGGCTTGCGTAGAGCTTTCCTATC
CTGGGAAAAGACTGTTGACTGAAGAAACGACATTCTGCTGTGTGCTTTGC
TGCAGCTTTTTTGTTGCCTGGAAACACAAATGAGTGCCGGCCAATGCACT
CATTCATTGCTGAGCACCAGCCTCCCCCCTCCCCTCGCCTCATCACCTCC
AAACATACGTACCTTCCACCACCATCACACAACACAGTCCATCATGGCGA
GAAGAAGACTAACAGGGCCTGCCACGCTCTGCCCAAGCAACTTGCTCCTC
TTTTCTCTTCTCCCTGCAGCCTGCGCCTTCCTCCTCCCCTCCTCCGGTCC
TGCCCGCCTGCTCCACGCCTCCTCCTCACTATCATCCTCCGCCTCCACTA
CCGCCACCTTCCACCCTAGCTGTAGGCCACCATCACACCTCTCTGCGGCC
CCCACTGCCGCCGGTGAAACAAAGACGACGCACCGCGCCCCCGGCACGGC
CGACTTGGACTGGGCCAACCTCGGCTTCGAATTCAGGCAAACGCGCAGTC
ACATCAAATTCGTCTGGAAAGACGGGAAATGGTCCGAAGGCGAGCTGGTG
GCCGATCCTTACGTAAAAGTGCATATCGCCAACACAGGGTTGCATTACGG
CCAGGCGATTTTTGAGGGTCTCAAGGCCTTTGCCTGGCAGGATGGTTCAG
TGCACATTTTCCGCCCTCAGGAGAACGCGAAGCGTCTACGCATGTCCGCC
GAACGTCTGCTCATGACCCCCTTCCCGGAAGATAAATTTGTAGAGGCGGT
CAAGCGAGTAGTGGCTGATAATGCTGATTTCGTCCCTCCGTTTGGCACCG
GGGGGAGTATGTATATCCGTCCTTTGCTGTTTGGGAGTGGGGCACGAATC
GGTCTTAATCCTGCAGATGAGTACACGCTCCTCATCTTGCCAATCCCGGT
GGGAGATTACTATAAGGGGGGATTGTCTCCAGTTTCAGCGCTCGTGATTG
ATGACTATGACAGGGCCGCGCCTCGGGGCGTCGGGCATGTGAAAGTAGCG
GGAAATTACGCTGCGGATTTATTGCCTAATATGCTGGGGAAGAAGAAGGG
CTTTCCGATTGGGTTGTACCTGGACGCCAAGACCAACAGCTACGTAGAGG
AGTTCTCGACGTCGAATTTTGTGGCGATAGATTCGAAGGGGGCGTTTGTG
ACGCCGAGCAGTCCGACGGTCCTCCCCTCCATTACCAACAAGTCCCTCAT
GGAGCTGGCGGCCGATATGGGCCTCGAAGTGAACGTTCGTCCTATCCCTA
TAACAGAAGTAAAGACCTTGAAAGAAGTCGCGGCATGCGGAACTGCCGTG
GTGGTCACCCCTGTCAATCGCATTGTCTATAAAGATGAGGTAATTAAGAT
TGGTGCCGAAGGAGGGGGGGAGGGAGGGACTGGGCCCATCACCGCGAAGC
TGTACGCAAGAGTGCGGGCGATTCAACAGGGAGAGGAGGAGGATAAGTTC
GGATGGACAGTGAAGGTCTAAGGGGGGAGGGAAAAGGAAGAAAGGAAGGA
GGGAAAGGCCTTGGGCGGCGATTGACTTGGCATGACGTTTGAGGCATGGA
CAGTAACAGAAATGAAGATGCTGAGGGCGAGAAAAGATCAACAAAGAAAG
AAAGAAGAAAAGTGAAGCAAATACACTGAACTCTTTCATCGTCGCTGACA
TGCACGCGAGGGCACTCGGAGGAGAAGA
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protein sequence of NO18G00890.1

>NO18G00890.1-protein ID=NO18G00890.1-protein|Name=NO18G00890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=464bp
MSAGQCTHSLLSTSLPPPLASSPPNIRTFHHHHTTQSIMARRRLTGPATL
CPSNLLLFSLLPAACAFLLPSSGPARLLHASSSLSSSASTTATFHPSCRP
PSHLSAAPTAAGETKTTHRAPGTADLDWANLGFEFRQTRSHIKFVWKDGK
WSEGELVADPYVKVHIANTGLHYGQAIFEGLKAFAWQDGSVHIFRPQENA
KRLRMSAERLLMTPFPEDKFVEAVKRVVADNADFVPPFGTGGSMYIRPLL
FGSGARIGLNPADEYTLLILPIPVGDYYKGGLSPVSALVIDDYDRAAPRG
VGHVKVAGNYAADLLPNMLGKKKGFPIGLYLDAKTNSYVEEFSTSNFVAI
DSKGAFVTPSSPTVLPSITNKSLMELAADMGLEVNVRPIPITEVKTLKEV
AACGTAVVVTPVNRIVYKDEVIKIGAEGGGEGGTGPITAKLYARVRAIQQ
GEEEDKFGWTVKV*
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Synonyms
Publications