NO18G00880, NO18G00880 (gene) Nannochloropsis oceanica

Overview
NameNO18G00880
Unique NameNO18G00880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3396
Alignment locationchr18:329450..332845 -

Link to JBrowse

Properties
Property NameValue
DescriptionGtp cyclohydrolase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:329450..332845 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:00086863,4-dihydroxy-2-butanone-4-phosphate synthase activity
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0009231riboflavin biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR017945DHBP_synth_RibB-like_a/b_dom
IPR036144RibA-like_sf
IPR032677GTP_cyclohydro_II
IPR000422DHBP_synthase_RibB
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO18G00880 vs. NCBI_GenBank
Match: EWM23288.1 (gtp cyclohydrolase [Nannochloropsis gaditana])

HSP 1 Score: 738.8 bits (1906), Expect = 1.900e-209
Identity = 434/512 (84.77%), Postives = 468/512 (91.41%), Query Frame = 0
Query:  264 KPTPTLLAEGPDFLFEYISQCELPTDRGLFHLRAYRYTHKTS-KLVVEPVVMFQGEHQGGKGVWVRVHDQCLTSEVLGSRRCDCKEQLELALDRIVGNGEEGGLVIYLPQEGRGIGLANKVAAYALQEQGLDTVDANLFLGFGDDERKYDYVGFILKDLGVESIRLATNNPFKTRSLRAVGVKVDVVEALQTPANRHNLHYLRTKILKMEHSMDLSLNGGKRKEGEREEGGSLDGTDAATTPELLTDSDKNSVREDLEGLMEDE-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQYCFGKATVEAAIQAMAQGGMVVVVDDEDRENEGDLIMAADAVTTQQMAFIVRYCSGVVCVSLEGKDLDRLALPPMIAQNEDPKHTAFAVSVDYKHGTTTGISAHDRAATLRALADPASKASDFTRPGHIFPLRYTPGGVKNRRGHTEAALDLSRLAGRRPMGVLCEICSEDGSMA 764
            KPTP LLAEGP F+FE+ISQCELPTDRGLFHLRAYRYTHKT  + VVEPVV+FQGEH+GGK VWVRVHDQCLTSEVLGSRRCDCKEQLE+ALDRIVGNG EGGLVIYLPQEGRGIGLANKVAAYALQEQGLDTVDANLFLGFGDDER YDYV FIL+DLG+ESIRLATNNPFKTRSLRA GV+VD V+ LQ  ANRHNLHYLRTKILKMEH+M+L L GG+ +EGEREEGGSLDGT+AATTPE+LT+SD+NS+  + E +++ E           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   P YCFGKATVEAAI A+A G MVVVVDDEDRENEGD+IMAAD VTT+ MAFIVR+CSGVVCVSLEG+DLDRLALPPMIA+NEDPKHTAF VSVDYKH TTTGISAHDRAATLRALADPAS+ASDFTRPGHIFPLRY+PGGV+NRRGHTEAALDLS+LAGRRP+GVLCEICSEDGSMA
Sbjct:  253 KPTPVLLAEGPAFVFEFISQCELPTDRGLFHLRAYRYTHKTGRRQVVEPVVLFQGEHRGGKQVWVRVHDQCLTSEVLGSRRCDCKEQLEMALDRIVGNGSEGGLVIYLPQEGRGIGLANKVAAYALQEQGLDTVDANLFLGFGDDERTYDYVSFILQDLGIESIRLATNNPFKTRSLRAAGVQVDGVDGLQPSANRHNLHYLRTKILKMEHAMELRLGGGEGREGEREEGGSLDGTEAATTPEVLTESDRNSLSSEKERILDQEGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQAPGYCFGKATVEAAINAVAAGKMVVVVDDEDRENEGDIIMAADKVTTEAMAFIVRHCSGVVCVSLEGEDLDRLALPPMIAENEDPKHTAFTVSVDYKHNTTTGISAHDRAATLRALADPASRASDFTRPGHIFPLRYSPGGVRNRRGHTEAALDLSKLAGRRPVGVLCEICSEDGSMA 764          
BLAST of NO18G00880 vs. NCBI_GenBank
Match: XP_005853996.1 (3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [Nannochloropsis gaditana CCMP526] >XP_005854912.1 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [Nannochloropsis gaditana CCMP526] >EKU21456.1 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [Nannochloropsis gaditana CCMP526] >EKU22365.1 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 737.3 bits (1902), Expect = 5.400e-209
Identity = 433/512 (84.57%), Postives = 468/512 (91.41%), Query Frame = 0
Query:  264 KPTPTLLAEGPDFLFEYISQCELPTDRGLFHLRAYRYTHKTS-KLVVEPVVMFQGEHQGGKGVWVRVHDQCLTSEVLGSRRCDCKEQLELALDRIVGNGEEGGLVIYLPQEGRGIGLANKVAAYALQEQGLDTVDANLFLGFGDDERKYDYVGFILKDLGVESIRLATNNPFKTRSLRAVGVKVDVVEALQTPANRHNLHYLRTKILKMEHSMDLSLNGGKRKEGEREEGGSLDGTDAATTPELLTDSDKNSVREDLEGLMEDE-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQYCFGKATVEAAIQAMAQGGMVVVVDDEDRENEGDLIMAADAVTTQQMAFIVRYCSGVVCVSLEGKDLDRLALPPMIAQNEDPKHTAFAVSVDYKHGTTTGISAHDRAATLRALADPASKASDFTRPGHIFPLRYTPGGVKNRRGHTEAALDLSRLAGRRPMGVLCEICSEDGSMA 764
            KPTP LLAEGP F+FE+ISQCELPTDRGLFHLRAYRYTHKT  + VVEPVV+FQGEH+GGK VWVRVHDQCLTSEVLGSRRCDCKEQLE+ALDRIVGNG EGGLVIYLPQEGRGIGLANKVAAYALQEQGLDTVDANLFLGFGDDER YDYV FIL+DLG+ESIRLATNNPFKTRSLRA GV+VD V+ LQ  ANRHNLHYLRTKILKMEH+M+L L GG+ +EGEREEGGSLDGT+AATTPE+LT+SD+NS+  + E +++ E           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   P YCFGKATVEAAI A+A G MVVVVDDEDRENEGD+I+AAD VTT+ MAFIVR+CSGVVCVSLEG+DLDRLALPPMIA+NEDPKHTAF VSVDYKH TTTGISAHDRAATLRALADPAS+ASDFTRPGHIFPLRY+PGGV+NRRGHTEAALDLS+LAGRRP+GVLCEICSEDGSMA
Sbjct:    6 KPTPVLLAEGPAFVFEFISQCELPTDRGLFHLRAYRYTHKTGRRQVVEPVVLFQGEHRGGKQVWVRVHDQCLTSEVLGSRRCDCKEQLEMALDRIVGNGSEGGLVIYLPQEGRGIGLANKVAAYALQEQGLDTVDANLFLGFGDDERTYDYVSFILQDLGIESIRLATNNPFKTRSLRAAGVQVDGVDGLQPSANRHNLHYLRTKILKMEHAMELRLGGGEGREGEREEGGSLDGTEAATTPEVLTESDRNSLSSEKERILDQEGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQAPGYCFGKATVEAAINAVAAGKMVVVVDDEDRENEGDIIIAADKVTTEAMAFIVRHCSGVVCVSLEGEDLDRLALPPMIAENEDPKHTAFTVSVDYKHNTTTGISAHDRAATLRALADPASRASDFTRPGHIFPLRYSPGGVRNRRGHTEAALDLSKLAGRRPVGVLCEICSEDGSMA 517          
BLAST of NO18G00880 vs. NCBI_GenBank
Match: CBN76675.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 402.1 bits (1032), Expect = 4.100e-108
Identity = 235/488 (48.16%), Postives = 289/488 (59.22%), Query Frame = 0
Query:  279 EYISQCELPTDRGLFHLRAYRYTHKTSKLVVEPVVMFQGEHQGGKGVWVRVHDQCLTSEVLGSRRCDCKEQLELALDRIVGNGEEGGLVIYLPQEGRGIGLANKVAAYALQEQGLDTVDANLFLGFGDDERKYDYVGFILKDLGVESIRLATNNPFKTRSLRAVGVKVDVVEALQTPANRHNLHYLRTKILKMEHSM----DLSLNGGKRKEGEREEGGSLDGTDAATTPELLTDSDKNSVR--EDLEGLMEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQYCFGKATVEAAIQAMAQGGMVVVVDDEDRENEGDLIMAADAVTTQQMAFIVRYCSGVVCVSLEGKDLDRLALPPMIAQNEDPKHTAFAVSVDYKHGTTTGISAHDRAATLRALADPASKASDFTRPGHIFPLRYTPGGVKNRRGHTEAALDLSRLAGRRPMGVLCEICSEDG 761
            +Y+S+C LPT RG F LR+YR  H+ +   +EPVVM  G+ Q  +GV VRVHDQCLTSEVLGS RCDCKEQLELALD I    E GG VIY+ QEGRGIGLANKVAAYALQ+ GLDTVDAN  LGF DD R Y+ V  IL D+G++SI+L TNNPFK + L+++G+KV     +    N H+L YLR K  +M H +    D+ + G    +G             AT P  L   +  ++R  E   G   +                                                            +  Y FG+ +V AAI+A+  G  VVV DDE RENEGDL+ AA+  T   +AF +R+ SGV+C SL  + L  L LP M+  NEDPK TAFA++VD K GT+TGISA DRA TLRALADP +   DF RPGHIFPLRYTPGGV  R GHTEAA+DL+ LAG  P+GVLCEI ++DG
Sbjct:  146 QYVSECLLPTPRGKFRLRSYR--HEGNGRSMEPVVMVAGDLQDLEGVPVRVHDQCLTSEVLGSLRCDCKEQLELALDYI---SEHGGCVIYMQQEGRGIGLANKVAAYALQDGGLDTVDANRHLGFDDDLRSYEAVEHILADMGIKSIKLMTNNPFKLKCLKSMGIKVLSRIPMLVAPNVHSLAYLRAKAHRMSHVLHQLDDVEILGESPSDG-------------ATAPVALPLDEVGAIRGGESTRGSEAE----------------------------------------------------------PDEEGYAFGRDSVLAAIEAVRSGKCVVVTDDEGRENEGDLVFAAEKATEDLLAFTIRHTSGVICASLGARRLQELRLPQMVENNEDPKMTAFAITVDAKFGTSTGISAGDRATTLRALADPEAGPRDFNRPGHIFPLRYTPGGVLERGGHTEAAVDLATLAGLSPVGVLCEITTKDG 557          
BLAST of NO18G00880 vs. NCBI_GenBank
Match: GAX18658.1 (3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [Fistulifera solaris])

HSP 1 Score: 370.2 bits (949), Expect = 1.700e-98
Identity = 228/488 (46.72%), Postives = 288/488 (59.02%), Query Frame = 0
Query:  279 EYISQCELPTDRGLFHLRAYRYTHKTSKLVVEPVVMFQGE---HQGGKGVWVRVHDQCLTSEVLGSRRCDCKEQLELALDRIVGNGEEGGLVIYLPQEGRGIGLANKVAAYALQEQGLDTVDANLFLGFGDDERKYDYVGFILKDLGVESIRLATNNPFKTRSLRAVGVKVDVVEALQTP-ANRHNLHYLRTKILKMEHSMDLSLNGGKRKEG-EREEGGSLDGTDAATTPELLTDSDKNSVREDLEGLMEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQYCFGKATVEAAIQAMAQGGMVVVVDDEDRENEGDLIMAADAVTTQQMAFIVRYCSGVVCVSLEGKDLDRLALPPMIAQNEDPKHTAFAVSVD--YKHGTTTGISAHDRAATLRALADPASKASDFTRPGHIFPLRYTPGGVKNRRGHTEAALDLSRLAGRRPMGVLCEICSED 760
            EY+++ +LPTD G F LRAYR    T++L  EP V++  +       + V VR+HDQC+TSEV  S+RCDCKEQL +AL +I    +EGGL+IYL QEGRGIGLANKVAAY LQ+ G+DTVDANL LGF +D R+Y  V  IL+DLG++SI L TNNP K   L+  GV V     +  P  N HN  YL +K  +M H+   +L G    +   R     L  TD   T    TD   N+++  L  L+E+E                                                           +  YCFG+ +VE AI AMA+G MVVVVDD DRENEGD IMAAD  + + MA IV+Y SGV+CV+LE   +++L +  M+  NEDPK TAF VSVD   +HG TTGISA DR+ T++ LA  +++ASD  RPGHIFPL+   GGV  R+GHTEAA+DLSRLAG  P GVLCEI SED
Sbjct:  107 EYVAETKLPTDIGQFQLRAYRIPQPTNRLNHEPCVIYNPKMPPFHSTQPVQVRIHDQCVTSEVFRSQRCDCKEQLHMALLKI---QKEGGLIIYLQQEGRGIGLANKVAAYQLQDHGMDTVDANLHLGFPEDLREYSVVPSILEDLGIQSIELMTNNPRKVELLKQAGVDVRGTVPMVVPKTNVHNQKYLESKFHRMHHANLAALVGTDESDVLSRNSNLPLYVTDEYITNG--TDLTANAIQVSL--LVEEE--------------------------------KAKAIAEAVGVDDEDDENGLEGVVASQEDGYCFGRESVEKAIAAMARGEMVVVVDDMDRENEGDFIMAADKCSPRDMAQIVKYSSGVICVALEKDRMEQLQIDAMVKNNEDPKGTAFGVSVDATKEHGITTGISATDRSKTVQLLAAASTQASDLQRPGHIFPLQAVQGGVLARQGHTEAAVDLSRLAGCAPAGVLCEIVSED 555          
BLAST of NO18G00880 vs. NCBI_GenBank
Match: GAX17273.1 (3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [Fistulifera solaris])

HSP 1 Score: 368.6 bits (945), Expect = 5.100e-98
Identity = 227/488 (46.52%), Postives = 287/488 (58.81%), Query Frame = 0
Query:  279 EYISQCELPTDRGLFHLRAYRYTHKTSKLVVEPVVMFQGE---HQGGKGVWVRVHDQCLTSEVLGSRRCDCKEQLELALDRIVGNGEEGGLVIYLPQEGRGIGLANKVAAYALQEQGLDTVDANLFLGFGDDERKYDYVGFILKDLGVESIRLATNNPFKTRSLRAVGVKVDVVEALQTP-ANRHNLHYLRTKILKMEHSMDLSLNGGKRKEG-EREEGGSLDGTDAATTPELLTDSDKNSVREDLEGLMEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQYCFGKATVEAAIQAMAQGGMVVVVDDEDRENEGDLIMAADAVTTQQMAFIVRYCSGVVCVSLEGKDLDRLALPPMIAQNEDPKHTAFAVSVD--YKHGTTTGISAHDRAATLRALADPASKASDFTRPGHIFPLRYTPGGVKNRRGHTEAALDLSRLAGRRPMGVLCEICSED 760
            EY+++ +LPTD G F LRAYR     ++L  EP V++  +       + V VR+HDQC+TSEV  S+RCDCKEQL +AL +I    +EGGL+IYL QEGRGIGLANKVAAY LQ+ G+DTVDANL LGF +D R+Y  V  IL+DLG++SI L TNNP K   L+  GV V     +  P  N HN  YL +K  +M H+   +L G    +   R     L  TD   T    TD   N+++  L  L+E+E                                                           +  YCFG+ +VE AI A+A+G MVVVVDD DRENEGD IMAAD  T + MA IV+Y SGV+CV+LE   +++L +  M+  NEDPK TAF VSVD   +HG TTGISA DR+ T++ LA  +++ASD  RPGHIFPL+   GGV  R+GHTEAA+DLSRLAG  P GVLCEI SED
Sbjct:  106 EYVAETKLPTDIGQFQLRAYRIPQPPNRLNHEPCVIYNPKMPPFHSTQPVQVRIHDQCVTSEVFRSQRCDCKEQLHMALLKI---QKEGGLIIYLQQEGRGIGLANKVAAYQLQDHGMDTVDANLHLGFPEDLREYSVVPSILEDLGIQSIELMTNNPRKVELLKQAGVDVRGTVPMVVPKTNVHNQKYLESKFHRMHHANLAALVGNDESDVLSRNSNLPLYVTDEYITNG--TDLTANAIQVSL--LVEEE-------------------------------KAKAIAEAVGVDDIGDDEDGLQGVVASQEDGYCFGRESVEKAIAAIARGEMVVVVDDMDRENEGDFIMAADKCTPRDMAQIVKYSSGVICVALEKDRMEQLQIDAMVKNNEDPKGTAFGVSVDATKEHGITTGISATDRSKTVQLLAASSTQASDLQRPGHIFPLQAVQGGVLARQGHTEAAVDLSRLAGCAPAGVLCEIVSED 555          
BLAST of NO18G00880 vs. NCBI_GenBank
Match: CEM38204.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 358.6 bits (919), Expect = 5.200e-95
Identity = 236/522 (45.21%), Postives = 312/522 (59.77%), Query Frame = 0
Query:  265 PTPTLLAE-GPDFLFEYISQCELPTDRGLFHLRAYRYTHKTSKLVVEPVVMFQGEHQGGKGVWVRVHDQCLTSEVLGSRRCDCKEQLELALDRIVGNGEEGGLVIYLPQEGRGIGLANKVAAYALQEQGLDTVDANLFLGFGDDERKYDYVGFILKDLGVESIRLATNNPFKTRSLRAVGVKVDVVEALQTPANRHNLHYLRTKILKMEHSMDLSLNGGKRKEGEREEGGSLDGTDAATTPELLTDSDKNSVREDLEGLMEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQP----------------------------QYCFGKATVEAAIQAMAQGGMVVVVDDEDRENEGDLIMAADAVTTQQMAFIVRYCSGVVCVSLEGKDLDRLALPPMIAQNEDPKHTAFAVSVDYKHGTTTGISAHDRAATLRALADPASKASDFTRPGHIFPLRYTPGGVKNRRGHTEAALDLSRLAGRRPMGVLCEICS 758
            P P +    GP    +++S+CE+PTD G+F LR+Y++     +  +  VVM  G+ +GG  V VRVHDQC+TSE LGS+RCDCK+QL++A++ +   G   G VIYL QEGRGIGLANK+AAYALQ++G+DTVDAN  LGF DD R Y+ V FIL+D+GVESI L TNNP K + L  +GV ++ +  L+   N  N  YL TK  +M H + L        + ++ +    +  D A   E +     N+            XXXXXXXXXXXXXXXXXXXXXXXX                                    P                            ++  G+ +VE AI+A+ +GGMV+V DDE RENEGDLIMAA+  T + +AF+VR+ SGV+CV +EG  LD L LPPM   N+DP+ TAF++S D  +G +TGIS+ DRA T+R LADP++ A DF RPGH+FPLRY  GGV  R GHTEA++DL+RLAG +P+ V+ EI S
Sbjct:  172 PPPAVFPNGGPKIYTKFVSECEMPTDHGVFRLRSYQHIAPDKQFDI--VVMINGDLKGGMDVPVRVHDQCMTSEALGSKRCDCKDQLDMAMEYV---GRNNGAVIYLQQEGRGIGLANKIAAYALQDRGMDTVDANRHLGFEDDTRSYESVPFILRDIGVESIVLMTNNPRKVKHLIQLGVNIEGIIPLRVSPNDFNRKYLETKSQRMMHVLPLEDWEDLLYQTKKAKLDIAEELDLAA--EGIQLKQVNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIQLTDPSIVPNKRPPSRKCPDDPQSGDKPGLPCSSPAAASVAPSAAPRMTVQVYHGVDLDLSTKRWRLGRTSVEEAIRALREGGMVIVTDDEKRENEGDLIMAAEKATPEDIAFMVRHTSGVLCVPMEGSRLDALNLPPMRTHNQDPRQTAFSLSCDIDNG-STGISSRDRALTIRRLADPSADAGDFIRPGHVFPLRYRDGGVFTRGGHTEASVDLTRLAGLQPVSVIGEIVS 685          
BLAST of NO18G00880 vs. NCBI_GenBank
Match: EJK53363.1 (hypothetical protein THAOC_27219 [Thalassiosira oceanica])

HSP 1 Score: 355.9 bits (912), Expect = 3.400e-94
Identity = 220/513 (42.88%), Postives = 276/513 (53.80%), Query Frame = 0
Query:  280 YISQCELPTDRGLFHLRAYRYTHKTSKLV------------VEPVVMFQ----------GEHQGGKGVWVRVHDQCLTSEVLGSRRCDCKEQLELALDRIVGNGEEGGLVIYLPQEGRGIGLANKVAAYALQEQGLDTVDANLFLGFGDDERKYDYVGFILKDLGVESIRLATNNPFKTRSLRAVGVK-VDVVEALQTPANRHNLHYLRTKILKMEHS-----MDLSLNGGKRKEGEREEGGSLDGTDAATTP---ELLTDSDKNSVREDLEGLMEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQYCFGKATVEAAIQAMAQGGMVVVVDDEDRENEGDLIMAADAVTTQQMAFIVRYCSGVVCVSLEGKDLDRLALPPMIAQNEDPKHTAFAVSVD--YKHGTTTGISAHDRAATLRALADPASKASDFTRPGHIFPLRYTPGGVKNRRGHTEAALDLSRLAGRRPMGVLCEICSED 760
            ++++  LPTD G F LRAYR       L              EP V+F           GE  G K V +R+HDQC TSEV  SRRCDCKEQL +AL  I    E GG +IYL QEGRGIGLANK+AAY+LQ+ GLDTVDAN  LGF +D R Y  V  ILKD+G++SI+L TNNP K   L ++GV  V  V  +   AN +N  YL TK  +M H+     ++ S N     +    E    +       P   E + D ++ +       LM+D                                                               YCFG+ +VE AI A+A+G ++VVVDDE RENEGD IMAAD  T ++MA  +RY SGV+C+ +EG  +D L LP M+  NEDPK TAF+V+VD   +HG TTGISA DR  T + LA+  +KASDF RPGHIFPLR    GV  R GHTEAA+D +RLAG  P G+LCEI SE+
Sbjct:  125 FVAETNLPTDIGHFRLRAYRVEEFEQALASSNPLGPGAGLGPEPCVIFASDKPPFGNRGGERGGAKAVPIRIHDQCFTSEVFRSRRCDCKEQLNMALSYI---RENGGAIIYLQQEGRGIGLANKIAAYSLQDVGLDTVDANTHLGFPEDCRTYGVVPSILKDMGIDSIQLMTNNPRKVERLSSLGVDVVGTVPMVVPTANPYNKKYLETKQKRMRHANFGSMLEASPNAIMSADDSHVEFMLREANVPPEEPLAEEYINDGEEMAANAVTVALMDD---------------------------------------------------PYQSGVVASDDGYCFGRKSVEEAIAAVARGELIVVVDDESRENEGDFIMAADLCTPEKMAEFIRYSSGVICIGMEGHRMDELELPAMVVDNEDPKETAFSVTVDATEEHGITTGISARDRCITSKMLANGDAKASDFHRPGHIFPLRAKENGVLTRDGHTEAAVDFARLAGSSPAGLLCEIVSEE 583          
BLAST of NO18G00880 vs. NCBI_GenBank
Match: OEU11600.1 (bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 289.3 bits (739), Expect = 3.900e-74
Identity = 181/413 (43.83%), Postives = 231/413 (55.93%), Query Frame = 0
Query:  362 EEGGLVIYLPQEGRGIGLANKVAAYALQEQGLDTVDANLFLGFGDDERKYDYVGFILKDLGVESIRLATNNPFKTRSLRAVGVKVDVVEALQTP-ANRHNLHYLRTKILKMEH----SMDLSLNGGKRKEGEREEGGSLDG----TDAATTPELL-TDSDKNSVR---EDLEGLMEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQYCFGKATVEAAIQAMAQGGMVVVVDDEDRENEGDLIMAADAVTTQQMAFIVRYCSGVVCVSLEGKDLDRLALPPMIAQNEDPKHTAFAVSVD--YKHGTTTGISAHDRAATLRALADPASKASDFTRPGHIFPLRYTPGGVKNRRGHTEAALDLSRLAGRRPMGVLCEICSED 760
            E GG +IYL QEGRGIGLANKVAAYALQ+ G+DTVDANL LGF +D R Y  V  IL D+ + SI+L TNNP K   L+ +GVKV     +  P  N  N  Y+  K  +M+H    S+ +        +        + G    T+  T  E++  ++ K S+    E+ EG++  +                                                              YCFG+ +VE AI AM +G MVVVVDD +RENEGDLIMAADA T + MAFIVRY SGV+C++++G  +D+L LPPM+  NEDPK TAF V+VD   +HG +TGIS+ DRA T+  LA   + A+DF RPGHIFPLR   GGV  R GHTEAA+DLS LAGR   G+LCEI SE+
Sbjct:    8 EHGGAIIYLQQEGRGIGLANKVAAYALQDVGMDTVDANLHLGFPEDARHYGAVPSILHDMKIGSIQLMTNNPRKVDKLKILGVKVQNTLPMVVPTTNPDNHRYMEAKYDRMDHQNLESLFIKTTNFDAADDXXXXXXXVIGETFVTECVTEGEVMAANAIKGSLAVSDENYEGVLAQDNG------------------------------------------------------------YCFGRESVEEAIAAMKKGKMVVVVDDMNRENEGDLIMAADACTPEDMAFIVRYSSGVICIAMDGDRMDKLKLPPMLTNNEDPKGTAFTVTVDATTEHGISTGISSTDRAKTVNMLASADAVATDFARPGHIFPLRARDGGVLERDGHTEAAVDLSYLAGRARSGILCEIVSEE 360          
BLAST of NO18G00880 vs. NCBI_GenBank
Match: WP_018747576.1 (3,4-dihydroxy-2-butanone-4-phosphate synthase [Chitiniphilus shinanonensis])

HSP 1 Score: 236.1 bits (601), Expect = 3.900e-58
Identity = 120/174 (68.97%), Postives = 138/174 (79.31%), Query Frame = 0
Query:  590 CFGKATVEAAIQAMAQGGMVVVVDDEDRENEGDLIMAADAVTTQQMAFIVRYCSGVVCVSLEGKDLDRLALPPMIAQNEDPKHTAFAVSVDYKHGTTTGISAHDRAATLRALADPASKASDFTRPGHIFPLRYTPGGVKNRRGHTEAALDLSRLAGRRPMGVLCEICSEDGSMA 764
            CF +  ++ A+ A+A GG VVVVDD DRENEGDLI+AADA+TT QMAF+VR+ SGVVCV+L  + LD L LP M+A N +   TAF VSVDY+HGT+TGISA DRAATLRALADPA  A DF RPGH+FPLRY  GGV  RRGHTEAALDL+ LAGR P GVLCEI  +DGSMA
Sbjct:    4 CFDE--IDTAVAAIAAGGFVVVVDDTDRENEGDLIIAADAITTGQMAFLVRHSSGVVCVALPPERLDELRLPLMVADNSESHATAFTVSVDYRHGTSTGISAADRAATLRALADPAIGADDFARPGHVFPLRYREGGVLRRRGHTEAALDLAALAGRAPAGVLCEIVDDDGSMA 175          
BLAST of NO18G00880 vs. NCBI_GenBank
Match: XP_005824331.1 (hypothetical protein GUITHDRAFT_47806, partial [Guillardia theta CCMP2712] >EKX37351.1 hypothetical protein GUITHDRAFT_47806, partial [Guillardia theta CCMP2712])

HSP 1 Score: 235.3 bits (599), Expect = 6.700e-58
Identity = 113/197 (57.36%), Postives = 146/197 (74.11%), Query Frame = 0
Query:  279 EYISQCELPTDRGLFHLRAYRYTHKTSKLVVEPVVMFQGEHQGGKGVWVRVHDQCLTSEVLGSRRCDCKEQLELALDRIVGNGEEGGLVIYLPQEGRGIGLANKVAAYALQEQGLDTVDANLFLGFGDDERKYDYVGFILKDLGVESIRLATNNPFKTRSLRAVGVKVDVVEALQTPANRHNLHYLRTKILKMEHSM 476
            E+I++C +PTDRG+F LR+YRY       ++EPVVM  G+ +G +GV VRVHDQC TSEVLGS+RCDCKEQL++AL+ I    +  G +IY+PQEGRGIGLANK+AAY LQ+ GLDTVDAN  LGF DDER YD V  IL+D+G+ S++L TNNP+K + L  VGVK+D  +      N +N+ YLRTK  +M HS+
Sbjct:    4 EFIAECHMPTDRGMFRLRSYRY---RGAKIMEPVVMVSGDLRGKEGVVVRVHDQCFTSEVLGSKRCDCKEQLDMALNYI---NQNSGAIIYMPQEGRGIGLANKIAAYQLQDNGLDTVDANRHLGFEDDERSYDCVPAILEDMGILSVQLVTNNPYKIQQLTDVGVKIDRTKPSLVEPNTYNVKYLRTKAARMSHSL 194          
The following BLAST results are available for this feature:
BLAST of NO18G00880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23288.11.900e-20984.77gtp cyclohydrolase [Nannochloropsis gaditana][more]
XP_005853996.15.400e-20984.573,4-dihydroxy 2-butanone 4-phosphate synthase / GT... [more]
CBN76675.14.100e-10848.16conserved unknown protein [Ectocarpus siliculosus][more]
GAX18658.11.700e-9846.723,4-dihydroxy 2-butanone 4-phosphate synthase / GT... [more]
GAX17273.15.100e-9846.523,4-dihydroxy 2-butanone 4-phosphate synthase / GT... [more]
CEM38204.15.200e-9545.21unnamed protein product [Vitrella brassicaformis C... [more]
EJK53363.13.400e-9442.88hypothetical protein THAOC_27219 [Thalassiosira oc... [more]
OEU11600.13.900e-7443.83bifunctional 3,4-dihydroxy-2-butanone 4-phosphate ... [more]
WP_018747576.13.900e-5868.973,4-dihydroxy-2-butanone-4-phosphate synthase [Chi... [more]
XP_005824331.16.700e-5857.36hypothetical protein GUITHDRAFT_47806, partial [Gu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL008nonsL008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR064ncniR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G00880.1NO18G00880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|533682gene_9559Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G00880.1NO18G00880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G00880 ID=NO18G00880|Name=NO18G00880|organism=Nannochloropsis oceanica|type=gene|length=3396bp
ATGAGAAGGCAGCCCGAGGGGAGTCACAACACCGACAACAACAGCATCAA
CACCACACCACCACCTGCAGCCGCCGTCTTCGTCGCCTGCCCCTCTGGCC
CTGGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCAGCAGCTGTCTT
AACCTCTGTGCATTAGTCTTTTTTGCGTGCCTCCTCTTGGCGTGGGTACC
GGATTCCGCCCTTGCCGTCTCCTCTTCTCTTCCATCCTCCTCAGGGTTTT
TGTCCCGTCGCGGCGGTGCCACCACGCCCATACCTCCGACCTCCGTCTCC
AGCAGCAGCAGTAGTAGTAACAGCAGCAGCAACAAAAAGAAAACTTATCG
TCGACCTTCTGCTGCGGCTCTCTCTACCACCAATATGTTGAATACTGACG
CCCCGCCCAGCATCAGCAGCACCTGCAGCAGCACCAGCAGCAGCACAAGC
AGCGACAGCAGTAGCCACGCATCCCTCCCTCATCCCAGCCCAAGCACCAC
ACCAGCTAAATCTACGAACAGCAGTCTTACTGGTGGACGTCTGTTCGGAG
ACAGATTCCTCCTGGCCACAGCCACTAGCAACAGGAGAAAAGCTGCAGCT
GCTGCTGCTTGCTCTCCTCAAAAGGAGCAAAAAGAACAGCAGCAGCAGCT
GCCCCTTGCAACTGGCAGTCTCCCTACTTCCCTCCATTTGCTGCACTCTC
ATCATCATCACAACCACGAGGAGGACGAGGATGGCGAGGAGGTGGTTCTC
TCGGCGCTCTCCTTGGCAATGGCGGATGCGAACATAGAGAAGCCGACGCC
TACCCTCCTTGCGGAAGGGCCTGACTTTCTTTTTGAGTACATTTCTCAAT
GTGAACTACCCACGGACAGAGGCCTTTTCCATCTCCGTGCGTACCGATAC
ACGCACAAGACAAGTAAGCTGGTGGTGGAGCCGGTGGTGATGTTCCAGGG
CGAGCACCAGGGAGGGAAGGGGGTTTGGGTCCGAGTGCATGACCAATGCC
TGACTTCCGAGGTGCTGGGCTCTCGACGATGCGATTGCAAAGAACAACTG
GAGCTAGCCCTTGATCGTATCGTGGGAAATGGAGAAGAGGGGGGGTTGGT
AATCTACCTACCACAGGAAGGGAGGGGGATTGGGCTCGCCAACAAGGTTG
CAGCGTACGCGCTGCAGGAGCAAGGGCTGGACACTGTGGATGCAAATCTG
TTCTTGGGGTTTGGGGACGATGAAAGAAAGTATGATTATGTTGGATTTAT
CCTGAAGGATTTGGGGGTGGAATCCATCAGACTGGCCACGAACAATCCTT
TCAAGACGCGGTCGTTAAGAGCCGTAGGTGTCAAGGTGGATGTGGTGGAG
GCCCTGCAAACACCGGCCAACCGGCATAATCTACACTACCTTCGAACGAA
GATCTTGAAGATGGAGCATTCGATGGACTTGTCCTTGAATGGGGGAAAAA
GGAAGGAAGGAGAGAGGGAGGAAGGGGGTAGTTTGGATGGGACGGATGCC
GCAACCACCCCGGAGCTTCTCACGGACAGTGACAAAAATTCCGTGAGGGA
GGACCTGGAGGGACTGATGGAGGACGAGGAAGGGAGGGAGGGTGAGGACG
GGCTGGAGGGGGAGGAGGAGGACGAGGCACGACTGTTGACGGCGGCCAAG
GCGGCAGCAAGGGCCATGCAAGAAGGAGGGAATGGACAAGTAGGGGCAGG
AACCGCGGCAGCATCAGCAGCGGCAGCAGCAGCAGCAGCCGCAGCAGAAT
TGGAGCAACCACAGTATTGTTTTGGCAAGGCCACGGTAGAAGCAGCAATC
CAGGCCATGGCCCAAGGAGGGATGGTGGTGGTGGTGGACGACGAGGATCG
CGAAAATGAAGGTGACCTCATCATGGCAGCCGACGCAGTAACCACCCAAC
AGATGGCATTCATCGTCCGTTACTGTTCTGGCGTTGTCTGCGTCTCTCTT
GAAGGAAAAGACTTGGACAGACTCGCCCTCCCTCCTATGATTGCTCAGAA
CGAGGACCCGAAACACACCGCGTTCGCGGTCTCTGTCGACTACAAACATG
GCACCACCACTGGTATCTCCGCTCATGATCGTGCTGCTACCCTCCGAGCC
CTCGCTGACCCTGCCAGCAAGGCAAGCGACTTTACACGTCCTGGGCATAT
ATTCCCTCTGCGATACACCCCGGGGGGGGTGAAGAACCGAAGGGGTCACA
CCGAGGCGGCGCTCGACCTCAGTCGGCTGGCGGGACGGAGGCCTATGGGG
GTGCTGTGCGAGATTTGCTCAGAGGATGGAAGTATGGCGAAGgtgccaga
attgaaggaattctgtaaaacgcatggcttggttttaacgagcattgctg
atttggtggcgtacaggattgagaaggagaggaaggagagataaaaaggg
gagggagggagggagggagggcgggcgggcgggagaaagggcgcggttgc
ccttccatctttaaagcgcacggctagcataatggcttagcccttaccgg
cattttgaatttggtggcacatcggaagacgggaaatattttataattac
gacagCAGAAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAA
CAGCAGACGACAGCAGCAGCTGAAGAGAGGATAAAGGAAATAGAAGAAGT
CGAAGGCATTATCCTATATGTGTCCTACAAATTGAGAGAGGGATTGATTG
CCAAGAACCGGGAGCTGTATGTGCGGTCAACGGTAAGTTGGTTGACTCCA
CACAAACACACAGAGGACACTCACTAAGTGTGATTAAACGAGATAAAAAT
TTTGAAAGCAAGCATGCAAGTGCACAAGCCCGCGAACGACGAAACTAACC
GGCAGTAACGCGAGTGGTCTCGAAAGCAGTTTCCCGGGGGAGGAACGGAA
GATGGATTTTACCGATAGCGAAAAGGTAAGAGAAGAAGGTTGAGAGAAGA
TATGTGTCGAGGAATAAGGTGCTTGCTATTTGCCGGCACGAGGGAGTTGT
TTAGTTCGTGAAAGAATAAGGATGGTAAATGAGTGGTGAGCTTGTGGCGG
ACCTACTCTCAAGAAAGACGAAGGTATAGGAGAGAGGACGAAGGACAAAT
TGTGACAAAATGTGTCTCCGTGGCAGCAGTAGCAGCAGTGCCAGCAGCGA
GCGCACCCGTATCAGCAGTAGAAAAGAGGCACAAGCCAGGAGTGGATAGA
AGAAAAAGAGTTAAGAGGAGGGACGGAAACAAAGAAAAAATGAAGGAGGC
GTACTGAGGAAAGACACTACTAGGATAGCTTCAGAGCAAGTTGGCCGCAA
TAGCAACAGAGGCAAACGATGATAAGGAATGGTTGAAACGGGAAAATAAT
GAGGATGAATGAGAAGAGCGAAACAAAAAGAAACATAATATTTACA
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protein sequence of NO18G00880.1

>NO18G00880.1-protein ID=NO18G00880.1-protein|Name=NO18G00880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=838bp
MRRQPEGSHNTDNNSINTTPPPAAAVFVACPSGPGSSSSSSSSSSRSSCL
NLCALVFFACLLLAWVPDSALAVSSSLPSSSGFLSRRGGATTPIPPTSVS
SSSSSSNSSSNKKKTYRRPSAAALSTTNMLNTDAPPSISSTCSSTSSSTS
SDSSSHASLPHPSPSTTPAKSTNSSLTGGRLFGDRFLLATATSNRRKAAA
AAACSPQKEQKEQQQQLPLATGSLPTSLHLLHSHHHHNHEEDEDGEEVVL
SALSLAMADANIEKPTPTLLAEGPDFLFEYISQCELPTDRGLFHLRAYRY
THKTSKLVVEPVVMFQGEHQGGKGVWVRVHDQCLTSEVLGSRRCDCKEQL
ELALDRIVGNGEEGGLVIYLPQEGRGIGLANKVAAYALQEQGLDTVDANL
FLGFGDDERKYDYVGFILKDLGVESIRLATNNPFKTRSLRAVGVKVDVVE
ALQTPANRHNLHYLRTKILKMEHSMDLSLNGGKRKEGEREEGGSLDGTDA
ATTPELLTDSDKNSVREDLEGLMEDEEGREGEDGLEGEEEDEARLLTAAK
AAARAMQEGGNGQVGAGTAAASAAAAAAAAAAELEQPQYCFGKATVEAAI
QAMAQGGMVVVVDDEDRENEGDLIMAADAVTTQQMAFIVRYCSGVVCVSL
EGKDLDRLALPPMIAQNEDPKHTAFAVSVDYKHGTTTGISAHDRAATLRA
LADPASKASDFTRPGHIFPLRYTPGGVKNRRGHTEAALDLSRLAGRRPMG
VLCEICSEDGSMAKQKQEQQQQQQQQQQQQQTTAAAEERIKEIEEVEGII
LYVSYKLREGLIAKNRELYVRSTVSWLTPHKHTEDTH*
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Synonyms
Publications