NO18G00850, NO18G00850 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G00850 vs. NCBI_GenBank
Match: XP_005854910.1 (atp-dependent clp protease proteolytic subunit [Nannochloropsis gaditana CCMP526] >EKU21454.1 atp-dependent clp protease proteolytic subunit [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 416.4 bits (1069), Expect = 7.300e-113 Identity = 211/256 (82.42%), Postives = 231/256 (90.23%), Query Frame = 0 Query: 3 MTTMLLLLVS--FALTTTGVHAFVPPATSTVATPSSPITVQPRARTDLARTARSSVVMMPASEPAVPYKAPGTDYHRYVGIYQRLYYDRVLLCGQFIDDRVANQIMSILWYLHNEDKNKPIYMYFNVPGALLRPALSVFDTMQAMSNEIETINIGLTTGMGAFLCAAGTKGRRFSLPNSRFLMQKTGFEEQVYGQASDIVLEVDSTMRENQRFLAELSRLTGRKPEQIKKDFGRDFYLSAEESVEYGMVDQVITPG 257 + T LLLLV + +++ GV AFV P ++ ++T +P+T+QPRARTDLA RS+VVMMPASEPAVPYKAPGTDYHRYVGIYQRLYYDRVLLCGQFIDDRVANQIMSILWYLHNEDK+KPIYMYFNVPGA+LRPALSVFDTMQAMSNEIETINIGLTTGMG FLCAAGT GRRF+LPNSRFLMQKTGFEEQVYGQASDI+LEV+ST+RENQRFL EL+RLTGR PE I DF RDFYLSAEESVEYGMVDQVI PG Sbjct: 20 VATPLLLLVHALYIMSSLGVGAFVLPTSTGISTSRTPMTIQPRARTDLAHKPRSNVVMMPASEPAVPYKAPGTDYHRYVGIYQRLYYDRVLLCGQFIDDRVANQIMSILWYLHNEDKHKPIYMYFNVPGAMLRPALSVFDTMQAMSNEIETINIGLTTGMGGFLCAAGTHGRRFALPNSRFLMQKTGFEEQVYGQASDIILEVESTVRENQRFLKELARLTGRAPETIVDDFARDFYLSAEESVEYGMVDQVIIPG 275
BLAST of NO18G00850 vs. NCBI_GenBank
Match: EWM23292.1 (atp-dependent clp protease proteolytic subunit [Nannochloropsis gaditana]) HSP 1 Score: 308.5 bits (789), Expect = 2.200e-80 Identity = 156/190 (82.11%), Postives = 172/190 (90.53%), Query Frame = 0 Query: 3 MTTMLLLLVS--FALTTTGVHAFVPPATSTVATPSSPITVQPRARTDLARTARSSVVMMPASEPAVPYKAPGTDYHRYVGIYQRLYYDRVLLCGQFIDDRVANQIMSILWYLHNEDKNKPIYMYFNVPGALLRPALSVFDTMQAMSNEIETINIGLTTGMGAFLCAAGTKGRRFSLPNSRFLMQKTGFEE 191 + T LLLLV + +++ GV AFV P ++ ++T +P+T+QPRARTDLA RS+VVMMPASEPAVPYKAPGTDYHRYVGIYQRLYYDRVLLCGQFIDDRVANQIMSILWYLHNEDK+KPIYMYFNVPGA+LRPALSVFDTMQAMSNEIETINIGLTTGMG FLCAAGT GRRF+LPNSRFLMQKTGFEE Sbjct: 36 VATPLLLLVHALYIMSSLGVGAFVLPTSTGISTSRTPMTIQPRARTDLAHKPRSNVVMMPASEPAVPYKAPGTDYHRYVGIYQRLYYDRVLLCGQFIDDRVANQIMSILWYLHNEDKHKPIYMYFNVPGAMLRPALSVFDTMQAMSNEIETINIGLTTGMGGFLCAAGTHGRRFALPNSRFLMQKTGFEE 225
BLAST of NO18G00850 vs. NCBI_GenBank
Match: CEM00799.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 228.8 bits (582), Expect = 2.200e-56 Identity = 105/198 (53.03%), Postives = 150/198 (75.76%), Query Frame = 0 Query: 58 MMPASEPAVPYKAPGTDYHRYVGIYQRLYYDRVLLCGQFIDDRVANQIMSILWYLHNEDKNKPIYMYFNVPGALLRPALSVFDTMQAMSNEIETINIGLTTGMGAFLCAAGTKGRRFSLPNSRFLMQKTGFEEQVYGQASDIVLEVDSTMRENQRFLAELSRLTGRKPEQIKKDFGRDFYLSAEESVEYGMVDQVITP 256 MMP++ P VPYK PG+D++ +V + RL DRV+ G+F+D+ ANQI++ L YL +ED +PI +Y NVPGAL++P+L+++D M + I T+N+GL TGMGAFLCAAGT G+RF LPN+RFLMQKTG EE + GQA+D+ ++V ++N+R LA+L++ TG+ +IKKDF RDFYL+A E+ YG+VD+V+ P Sbjct: 1 MMPSTTPQVPYKPPGSDFYTWVDLNTRLLRDRVIFVGRFLDEEAANQIIATLLYLRSEDSTRPISLYMNVPGALMKPSLAIYDAMIGVECPISTLNLGLATGMGAFLCAAGTPGQRFCLPNARFLMQKTGMEEGMRGQATDLAIDVAENYKDNERMLAKLAQHTGQSLTKIKKDFERDFYLTANEAKLYGVVDKVLLP 198
BLAST of NO18G00850 vs. NCBI_GenBank
Match: XP_009034839.1 (hypothetical protein AURANDRAFT_58799 [Aureococcus anophagefferens] >EGB09993.1 hypothetical protein AURANDRAFT_58799 [Aureococcus anophagefferens]) HSP 1 Score: 224.2 bits (570), Expect = 5.300e-55 Identity = 107/214 (50.00%), Postives = 149/214 (69.63%), Query Frame = 0 Query: 42 PRARTDLARTARSSVVMMPASEPAVPYKAPGTDYHRYVGIYQRLYYDRVLLCGQFIDDRVANQIMSILWYLHNEDKNKPIYMYFNVPGALLRPALSVFDTMQAMSNEIETINIGLTTGMGAFLCAAGTKGRRFSLPNSRFLMQKTGFEEQVYGQASDIVLEVDSTMRENQRFLAELSRLTGRKPEQIKKDFGRDFYLSAEESVEYGMVDQVITP 256 P LA+ +R S +VPY+ PG+D H +V IYQRLY DR++L G F+D+ AN ++++L YL ED KPI +YFNVPGAL++P L+V+DT+Q + + T+N+GL TGMGAFLC AGTKG R++LPN+RFLMQ+TG ++ GQASDI L V +R+N R L ++TG + I +D RDFYLSA E+V+YG++D+V+ P Sbjct: 16 PAGGEGLAKASRYS------GRTSVPYQPPGSDSHMFVDIYQRLYRDRIMLVGNFLDEEQANSLIAVLLYLRFEDPKKPISIYFNVPGALMKPCLAVYDTLQTLECPVTTVNLGLATGMGAFLCGAGTKGCRYALPNARFLMQRTGLDDPFQGQASDIGLVVRENLRDNDRMEKALVKMTGNSIDVIHQDMKRDFYLSAHEAVQYGLIDKVLIP 223
BLAST of NO18G00850 vs. NCBI_GenBank
Match: XP_002179995.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48186.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 222.6 bits (566), Expect = 1.600e-54 Identity = 105/205 (51.22%), Postives = 146/205 (71.22%), Query Frame = 0 Query: 53 RSSVVMMPASEPAVPYKAPGTDYHRYVGIYQRLYYDRVLLCGQFIDDRVANQIMSILWYLHNEDKNKPIYMYFNVPGALLRPALSVFDTMQAMSN--EIETINIGLTTGMGAFLCAAGTKGRRFSLPNSRFLMQKTGFEEQVYGQASDIVLEVDSTMRENQRFLAELSRLTGRKPEQIKKDFGRDFYLSAEESVEYGMVDQVITP 256 R + MP+ P VPY PG DY +++ I +Y DR L FID+ AN ++SI+ YL NE PI MYFNVPGALLRP+L+++D +Q EIET+N+GL GMGAFLC+AGTKG+R ++PNSRFL+Q+TG +E GQA+DI LEV + + N R ELS++TG+ E+I++D RDFYLS++E+V+YG++D+V+ P Sbjct: 46 RRETIRMPSQSPQVPYMPPGADYAQFIDIEAAMYRDRTLFISTFIDEETANSLISIMLYLRNESPKDPISMYFNVPGALLRPSLALYDLIQQTKQKCEIETVNLGLCAGMGAFLCSAGTKGKRNAMPNSRFLLQRTGMDEVFRGQATDIALEVRNVKKWNDRMEEELSQMTGQPLERIQQDLKRDFYLSSDEAVQYGLIDRVLLP 250
BLAST of NO18G00850 vs. NCBI_GenBank
Match: GAX14210.1 (hypothetical protein FisN_20Hh167 [Fistulifera solaris]) HSP 1 Score: 216.9 bits (551), Expect = 8.500e-53 Identity = 101/201 (50.25%), Postives = 145/201 (72.14%), Query Frame = 0 Query: 57 VMMPASEPAVPYKAPGTDYHRYVGIYQRLYYDRVLLCGQFIDDRVANQIMSILWYLHNEDKNKPIYMYFNVPGALLRPALSVFDTMQAMSN--EIETINIGLTTGMGAFLCAAGTKGRRFSLPNSRFLMQKTGFEEQVYGQASDIVLEVDSTMRENQRFLAELSRLTGRKPEQIKKDFGRDFYLSAEESVEYGMVDQVITP 256 + MP++ P VP+K PG+DY +++ I +Y DR + ++IDD+ AN I+SI+ YL NE PI MYFNVPGA LRPAL+++D MQ EI+T+N+ LT GMG+ LCAAGTKG+R +LPN+RFL+ +TG ++ GQA+DI LEV + + N R EL+ LTG+ ++I++D RDFYL A+E+V+YG++DQV+ P Sbjct: 51 IQMPSTTPMVPFKPPGSDYAQFIDIESAMYRDRTMFIAKYIDDQAANSIISIMLYLRNESPRSPISMYFNVPGANLRPALAIYDLMQNTKKNCEIQTVNLALTAGMGSILCAAGTKGQRSALPNARFLLHRTGMDQVFRGQATDIALEVKNLKQANDRMEQELALLTGQPVDRIQQDLKRDFYLFADEAVQYGLIDQVLLP 251
BLAST of NO18G00850 vs. NCBI_GenBank
Match: GAX28866.1 (hypothetical protein FisN_20Lh167 [Fistulifera solaris]) HSP 1 Score: 214.9 bits (546), Expect = 3.200e-52 Identity = 100/201 (49.75%), Postives = 144/201 (71.64%), Query Frame = 0 Query: 57 VMMPASEPAVPYKAPGTDYHRYVGIYQRLYYDRVLLCGQFIDDRVANQIMSILWYLHNEDKNKPIYMYFNVPGALLRPALSVFDTMQAMSN--EIETINIGLTTGMGAFLCAAGTKGRRFSLPNSRFLMQKTGFEEQVYGQASDIVLEVDSTMRENQRFLAELSRLTGRKPEQIKKDFGRDFYLSAEESVEYGMVDQVITP 256 + MP++ P VP+K PG+DY +++ I +Y DR + ++IDD+ AN I+SI+ YL NE PI MYFNVPGA LRPAL+++D MQ EI+T+N+ LT GMG+ LCAAGTKG+R +LPN+RFL+ +TG ++ GQA+DI LEV + + N R EL+ LTG+ ++I++D RDFYL A+E+ +YG++DQV+ P Sbjct: 53 IQMPSTTPMVPFKPPGSDYAQFIDIESAMYRDRTMFISKYIDDQAANSIISIMLYLRNESPRSPISMYFNVPGANLRPALAIYDLMQNTKKNCEIQTVNLALTAGMGSILCAAGTKGQRSALPNARFLLHRTGMDQVFRGQATDIALEVKNLKQANDRMEQELALLTGQPLDRIQQDLKRDFYLFADEAAQYGLIDQVLLP 253
BLAST of NO18G00850 vs. NCBI_GenBank
Match: CBJ29870.1 (ATP-dependent Clp protease proteolytic subunit [Ectocarpus siliculosus]) HSP 1 Score: 211.5 bits (537), Expect = 3.600e-51 Identity = 99/197 (50.25%), Postives = 141/197 (71.57%), Query Frame = 0 Query: 59 MPASEPAVPYKAPGTDYHRYVGIYQRLYYDRVLLCGQFIDDRVANQIMSILWYLHNEDKNKPIYMYFNVPGALLRPALSVFDTMQAMSNEIETINIGLTTGMGAFLCAAGTKGRRFSLPNSRFLMQKTGFEEQVYGQASDIVLEVDSTMRENQRFLAELSRLTGRKPEQIKKDFGRDFYLSAEESVEYGMVDQVITP 256 MP+SEP VPY G+ ++ + Q L R+++ G+FID+ ANQ++++L Y D NK I +YFN PGAL+RPAL+V+DT+ M E+ T+N+GL TGM +FLCAAG +G+R++LPNSRFLMQ+TG E+ GQASDI +EV + MR N + L R+TG +I +DF RDFYLS+ E+V+YG++D+V+ P Sbjct: 1 MPSSEPMVPYTRDGSTVATWMPVSQCLQQSRIIMVGKFIDEEYANQLIAMLLYHEKNDPNKKISLYFNCPGALIRPALAVYDTLMHMGPELSTLNLGLATGMVSFLCAAGKRGQRYALPNSRFLMQRTGMEDPYQGQASDIGVEVQNVMRGNSKMEEALQRITGHTVAKIHEDFQRDFYLSSAEAVQYGIIDEVLLP 197
BLAST of NO18G00850 vs. NCBI_GenBank
Match: OEU17200.1 (CLP_protease-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 211.5 bits (537), Expect = 3.600e-51 Identity = 104/228 (45.61%), Postives = 155/228 (67.98%), Query Frame = 0 Query: 30 TVATPSSPITVQPRARTDLARTARSSVVMMPASEPAVPYKAPGTDYHRYVGIYQRLYYDRVLLCGQFIDDRVANQIMSILWYLHNEDKNKPIYMYFNVPGALLRPALSVFDTMQAMSN--EIETINIGLTTGMGAFLCAAGTKGRRFSLPNSRFLMQKTGFEEQVYGQASDIVLEVDSTMRENQRFLAELSRLTGRKPEQIKKDFGRDFYLSAEESVEYGMVDQVITP 256 T A+ S + ++ R + MP+ P VP+ PG+DY +++ I +Y DR L+ +FID+ AN+I+SIL ++ +D K I +YFNVPGALLRP+L+++D ++ EIET+N+GL TGMG+FLCAAGTKG+R ++PNSRFL+Q+ G ++ V GQA+DIVLEV + N R L+ LTG+ E+++ D RDFYLS++E+V+YG++DQV+ P Sbjct: 42 TAASLSQKAVTKASNNQFMSAGTRRDTIKMPSQTPMVPWTPPGSDYAQFMDINSAMYRDRTLMISRFIDEEAANEIISILLWMRQQDSYKTISIYFNVPGALLRPSLAIYDLIEQTKQTCEIETVNLGLCTGMGSFLCAAGTKGKRSAMPNSRFLLQRMGLDQPVRGQATDIVLEVKNIKMWNDRTEKILATLTGQPIEKVQTDLKRDFYLSSDEAVQYGLIDQVLLP 269
BLAST of NO18G00850 vs. NCBI_GenBank
Match: EJK71099.1 (hypothetical protein THAOC_07491 [Thalassiosira oceanica]) HSP 1 Score: 206.8 bits (525), Expect = 8.800e-50 Identity = 113/251 (45.02%), Postives = 160/251 (63.75%), Query Frame = 0 Query: 13 FALTTTGVHAFVPPATSTVAT-PSSPITVQPRARTDLARTARSSV----VMMPASEPAVPYKAPGTDYHRYVGIYQRLYYDRVLLCGQFIDDRVANQIMSILWYLHNEDKNKPIYMYFNVPGALLRPALSVFDT---MQAMSNEIETINIGLTTGMGAFLCAAGTKGRRFSLPNSRFLMQKTGFEEQVYGQASDIVLEVDSTMRENQRFLAELSRLTGRKPEQIKKDFGRDFYLSAEESVEYGMVDQVITP 256 FAL FV + S+ T P+S T +P + A T R SV +MMP EP VPY+APG+ Y ++VG+ R DR L ++IDD N+I+S L YL +ED K I +Y N+PGA LRP+L+++D ++A +I T N+ L GMGA + AGTKG R+SLPN+R+L+QKTG + GQA+DI LEV + N++ AE+S++TG+ E+I D RDFYLS+EE+V YG++D+V+ P Sbjct: 9 FALGALAALLFVGVSPSSAFTVPASGRTTRPSRGSAAAATTRLSVKRMPIMMPTQEPMVPYRAPGSTYDQFVGMKTRQLRDRTLWIARYIDDDATNEIISSLLYLQSEDDKKEIKLYLNIPGANLRPSLAIYDALMDLKASGIKISTTNVALCAGMGALIAGAGTKGMRYSLPNARYLLQKTGMDGVFQGQATDIYLEVKNIKEWNEKINAEISKVTGQPVERIDNDLKRDFYLSSEEAVRYGLIDEVLLP 259 The following BLAST results are available for this feature:
BLAST of NO18G00850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00850 ID=NO18G00850|Name=NO18G00850|organism=Nannochloropsis oceanica|type=gene|length=2046bpback to top protein sequence of NO18G00850.1 >NO18G00850.1-protein ID=NO18G00850.1-protein|Name=NO18G00850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=292bpback to top protein sequence of NO18G00850.2 >NO18G00850.2-protein ID=NO18G00850.2-protein|Name=NO18G00850.2|organism=Nannochloropsis oceanica|type=polypeptide|length=290bpback to top Synonyms
Publications
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