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Properties
| Property Name | Value |
|---|
| Description | Dymeclin |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr18 | genome | chr18:304192..308546 + |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
| Term | Definition |
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| IPR019142 | Dymeclin |
Homology
BLAST of NO18G00790 vs. NCBI_GenBank
Match: EWM23284.1 (Dymeclin [Nannochloropsis gaditana]) HSP 1 Score: 285.8 bits (730), Expect = 6.400e-73 Identity = 269/559 (48.12%), Postives = 307/559 (54.92%), Query Frame = 0
Query: 652 LQLPFDKLFAALARSLPQGEPAPLLFYSLLVSPNPLFLSCTLAQSDVDTLLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSAFNSALFRRLFLPSVPWYRERMLARTSLGSLSLLCLLRVLLFAIQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTHALLSTALRAILSFFTIALSPPLLPTNLSLIHSLLYSRHHLEPLLSHPSIRALASASFPPSL---PHALHSIQGEGXXXXGSEVGLGIVPEVLLFFGRLFDETEETLSVDKAMLLLEKGAREWQGRKEGGREGGLGPGGEMAIDPELKFTYEEEAEAEAFFVPYIWEIVHAKTKEDVWWITPCISAF--TPPXXXXXXXXXXXXXXXXXXXEGKGVVRKFLAGAMGVVPSSL 1206
L+LPFD+LF A R LP GEPAPLLFY+LL SPNPLFLS +LAQ DV++LLLP DSAFN+ALFRR FLPSVPWY+ER+L RTSLGSL+LLCLLR LLFA+ XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXX SLTHALLS+ LR +LSFF+IALSP LLP+NL+L+HSLLYSR HLEPLL+HP++RALA+ASFPPSL P H +Q EG G LG+VP VL FFGRLFDETE TLSV++AM +LEKGAREW G +E DPELKFTYEEE EA++FFVPYIWE ++ TKED+WW+ I F TP XXXXXXXXXXXXXXXX +G+VR+ LAG M V+P+SL
Sbjct: 175 LRLPFDRLFTAFGRLLPLGEPAPLLFYTLLSSPNPLFLSTSLAQGDVESLLLP-----------------------LLHQLYRPDRLPSLPPSPRPLYLLLTILLLFSQDSAFNTALFRRHFLPSVPWYKERLLGRTSLGSLALLCLLRALLFALH--------------------------------PAPAPSLKPIPETXXXXXXXXXXXXXXXXXLYLLQTSGAILLNLAAQAEHLHDYAALRLTQVLLLLLRRYVRLVEGLLSSSCPPLPLPAAGAVTAAAPSSFPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPNPSLTHALLSSGLRTLLSFFSIALSPSLLPSNLALVHSLLYSRQHLEPLLAHPAVRALATASFPPSLPPFPSPSHPVQ-EG----GXXXXLGLVPGVLEFFGRLFDETEGTLSVEQAMQVLEKGAREWVGGRE--XXXXXXXXXXXXXDPELKFTYEEETEADSFFVPYIWETIYTITKEDLWWMPQYIQLFGPTPSXXXXXXXXXXXXXXXXAAPSSQGMVRRLLAGTMSVIPTSL 671
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00790 ID=NO18G00790|Name=NO18G00790|organism=Nannochloropsis oceanica|type=gene|length=4355bp
CAGGGGTTGTACGTAGGTATTTTAACTTGTTTTTCCCTTCGCGACCTGGA
CTGATTGTTTGGCGGCATTCCGGGGAGGGAGGGAGGGAGGCCAAAAGCCA
GGTCATTGAGGAGCCTAGCGCAAAAACTTCTTGCATATTAGTTCCTGGGA
CACAGGCCCTTTAGCTTGTACTGCTGCCCCTCAAAACAGTCGCGAGCACA
GGAACTGCAGGTGTTGATGGAGTGCTCTGCGACTATTCAAACACCATCAT
TCTTCGTCGCCCCGCTTCCTCTCCCCCCCCTCCACAGACGGGACATTACT
CCTGCGCACACTCCATATCTTCCTCATTCCTCGACACATCCACAGCTGCA
AATAGAGGGGCCTTCGATTGTTGTCGGCGGCGGTGGCGCGTACTGAACCC
GCTCGTCCTCGTTTTTTTCTCCTTTCAACCACTAGCACTAGCACCAGCAC
CATCACCACCATCTTTGCCCGCCTTCTCCCACGACAAGCTAGCCGCACAC
TCAGGCGAGAATGATGGCCACCACCACCACCAGTACCATCCCCTCCGCTT
CCTCTAACACAATTACCAGCAGCACGCACCTTCCCCCTGCAGTCGACCCA
CACCTGCTGGACCTGCTGGAAACCCTATCTGGACCCCACCCCATCCCTTC
CAACGCCCCCTTCTGGCGACACGGGCTTCTCCTTGCACCCGACCTCCGTG
AGACCTGCCGCCGAGATGCGGGCGTGCATGCCGATAACCCTGTGATGGAA
CACTTCGCAGCGCGTTTATTGTCCTGTAATCATCGATCAGGCAATTTGGG
GAGGCTGGTGCAACATACCATACAGAGTGTGGAGGAGGGAGGGCGGGACG
GCGGGAAGGAAGGTGGGATTGAGGTGGAAAGGGCGATGAATGCCATGAGA
CTAACGGCAGTTTTTGTAGGCTATTTGCTGGCGAGAGCGGGTGAGGGTGG
AGAAGGAGGAAGGGGCGTCGAGATGGTGCTAGAGCACATACAGCCATTCT
CGTATGTTGAGGAAGGGAGGGAGAGGAGAAGAAGACGTACTCATGGCTCT
TCATCCTCTTCACCCTCCTCTTTCTCGTCTAATTCGGTTTCGTCATCGGT
GTCGCCGTCGGCGGAAGCAGCAGCAGCAGCAGTGGCGGAAGGAGGAGAAG
GAATTATACGGCTTTCCTCTTCCTCCTCCTCGGTGTCCTCCCCCCCATCC
TCCCCCCCTACCCCCATCATCCCCTCTCTTCTTCATGCACTGTGCCGCTT
TATCCTCTCCGGAAGAGACGCCACCCTTCCGTCCTCCGTCCCTCCCTCCT
CTCTTTCTCCCTCCGCTTACCTGGAAGCAATAAATCTTCTCCTTGTACTC
TGTTCCAGCCAGCTTTATGGAGCGAGGGACGGGAGGGAGGGAAGGAGGGA
GGGAGGGAAGACTCGCCCCAAGGAACACATTTTCCTCGATGCGCTCATGG
AAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCGTGAGGATGGTAAGGCAA
TTATTGATGTGGTTTGTCCAGCCGACTGTTCCTCCTGTGGGAGGGAGGGA
GGAAGGGAGGGAGGGAGGGCGGACGAGGGGCAAGAGCAGCAACAGCAGGA
GTAGTAGCAGTGAGGACGTAAAATCACTGACAGGGGCCTTGTCAGGCTGG
ATGAATACACCGCGATGGTTAGGGGGAGGGCGGGAGGGCGGGAAGGGAGG
GCGGGAGGAAGGGAGGATAGCATCGGCATCTGCGTCTCATTCTTTTACCG
AGGGCTTGGAAGGAGGAACGAGACCCTGTTCCTATAACCAGCAGCAGAGA
GAGAGCACGATTCCTATTCCAGAAGGTGGAGGGAGGGAGGAAGGAAGGGA
GGAAGGGAGGGAGGGGAAGGGTGGTGCTGGGATGTTTCGAAATCTATATT
CGTATGTGGTCGGGGGGGAGGGAGGGAAGGAGGGAGGGGTTTCTTCCCCC
GCGGCCTCGGCTCACACAACCTCTTCCTCTTTGGATGGAAGCGACAGTAG
TAGTAGCAGCAATACCAGGGGCAGCAGGAGCAGCAATACCAGCAGCAGTA
GAGGAGGAGGAAAGGCGCTGACCGCAGCAGCAGCTGCTGGTGCTGCTGCT
GCTGCTGCCGCCGCTGCTGTCGGGGTTAAAAGTGGAGGAGGTAGAGGAGG
AAGGGAAGGAGGGCAAGGAGAAGCTGCTGTATTACTGGGGCAACGAGGAG
TACTGCTACTGCTGCTCCTTCTATTCTACCGTCGAGGCGAAGGCAGCAGC
AGTAGCAGCAGCAGTACGACAAACACCTCTCTCAACACCAGTAGCAGCAG
CAGTAGCAACCCATTTCGTACTGCGTTCGACTCACTTAAAGATGAGAGGT
ACCAATACGAAGAGGAAGACGTTGACGAAGAAGCTGCTGCTGTCCCCATG
GCAGGAGCACGAGCAGCAGCAGCAGCAGCCGGAGGAGGGAAGGAGGGAGT
GGCATCGCGGCAGCTGCAGCTCCCCTTCGATAAACTCTTCGCTGCCCTTG
CCCGTTCCCTCCCTCAGGGCGAGCCGGCTCCTCTCCTTTTCTACTCCCTC
CTCGTCTCACCCAACCCCCTCTTCCTCTCCTGCACCCTCGCGCAATCGGA
TGTAGATACCCTCCTCCTCCCCCTCCTCCATCAACTCTACCACCCCGCCG
CCTCCTCCTCGCCCTCCTCCTCGTCCTCATCGTCATCGTCGTCCTCCTCC
TCCTTCACCGGGTCATCCCTCCCTCCCTCCCTCCCCCCCTCCCCCCGACC
TCTCTACCTTCTTCTCACCCTCCTCCTCCTTCTCTCCCAAGATTCCGCCT
TCAACTCCGCCCTTTTCCGACGGTTGTTTCTTCCCTCTGTCCCATGGTAT
AGAGAAAGAATGCTTGCACGGACCTCCCTTGGATCCCTCTCCCTCCTCTG
CCTTCTTCGTGTCCTCCTCTTTGCGATACAAACCCCTCTTCCTCCTCGCC
CTCACGAGCACCAGCACCAGCAGTGCCATCTGCAGCCACATTCGCAGCTA
GAGAGTGTTAGCAGCAGCAGCAGCAGCGGAGATGGAAGCCGGCTCTACCT
TCTCTCCACCACCAGCGCCATCCTCCTGAACCTTTCAGCCCAAGCAGAAC
ACATTCACGGCTATGCTTCCCTCCGCCTCGTTCACGTCCTCCTCCTCCTT
CTTCGGCGGTATGTCCAATTTGCCGAGCGTCTCTCCTCTTCTTCCTCTTC
CCCGTCCTCCGTCTCCTCCTCCTCCTCTCCTGTCCCTGCTGGTGCTGCGA
CTGCTCCTTCTCCTCAGCCTTCCTCGTCGTCCCCCACCCTGCCCTCGCAT
CATCACTCGGCTTCCAACAGCAGCAGCTATAGCAGCAGCAGCAGCAGCAG
CAGCAACAGCTGCAACAACACCAACGGCACCCATCATCCCTCATATCCTA
CTTCCTCCTCGTCCTCCTCGACAGATGACGACCCCTCCCTCACGCACGCT
CTCCTCTCAACAGCCTTGCGGGCCATCCTGTCCTTCTTCACGATTGCCCT
CTCTCCTCCCCTTCTTCCCACCAACCTCTCCCTCATCCACTCCCTCCTCT
ACTCTCGTCACCATCTCGAGCCTCTCCTCTCCCACCCTTCCATCCGTGCC
CTCGCCTCGGCCTCGTTCCCACCCTCTCTCCCGCACGCCCTCCATTCCAT
CCAAGGGGAAGGGGAAGGGGAAGGAGGGAGCGAGGTAGGGCTAGGAATTG
TGCCTGAGGTATTGCTTTTTTTCGGGCGTCTTTTCGACGAGACGGAAGAG
ACGCTGTCCGTGGACAAAGCCATGCTATTGTTAGAGAAAGGAGCAAGGGA
ATGGCAGGGTAGGAAGGAGGGAGGGAGGGAGGGCGGACTAGGCCCAGGGG
GAGAGATGGCCATAGACCCTGAATTGAAGTTTACGTATGAGGAGGAGGCG
GAAGCGGAGGCGTTCTTTGTGCCCTACATATGGGAAATCGTACATGCAAA
GACCAAGGAGGATGTGTGGTGGATCACACCGTGTATTTCTGCCTTCACAC
CACCCCTCCCGCCCTCACTCCCGCCCTCACTCCCGCCCTCGGCCCCTTCC
GCTCCTCCAGAGGAAGGGAAGGGGGTGGTGAGAAAATTTCTGGCGGGGGC
CATGGGGGTTGTGCCGTCCTCCCTCACATCCTTGTCTTCTTCTTCTTCCT
CTCAGCAGCGACAAAGGCAAGAGCAACCAGCTTATGGAAGCACTGGGAGT
AGAGGTGACAGTAGCAGTCGTGCCTCCCCCCCCCCCGTGGTGGTGACGAT
GCACGTCTAGCTGCAGCAGGAGGAGGAGCAATAGAATCAGTAGCAGCGTC
AACATCAGCTGTATAAAGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGA back to topprotein sequence of NO18G00790.1 >NO18G00790.1-protein ID=NO18G00790.1-protein|Name=NO18G00790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1250bp
MMATTTTSTIPSASSNTITSSTHLPPAVDPHLLDLLETLSGPHPIPSNAP
FWRHGLLLAPDLRETCRRDAGVHADNPVMEHFAARLLSCNHRSGNLGRLV
QHTIQSVEEGGRDGGKEGGIEVERAMNAMRLTAVFVGYLLARAGEGGEGG
RGVEMVLEHIQPFSYVEEGRERRRRRTHGSSSSSPSSFSSNSVSSSVSPS
AEAAAAAVAEGGEGIIRLSSSSSSVSSPPSSPPTPIIPSLLHALCRFILS
GRDATLPSSVPPSSLSPSAYLEAINLLLVLCSSQLYGARDGREGRREGGK
TRPKEHIFLDALMEEGGREGGREGVRMVRQLLMWFVQPTVPPVGGREEGR
EGGRTRGKSSNSRSSSSEDVKSLTGALSGWMNTPRWLGGGREGGKGGREE
GRIASASASHSFTEGLEGGTRPCSYNQQQRESTIPIPEGGGREEGREEGR
EGKGGAGMFRNLYSYVVGGEGGKEGGVSSPAASAHTTSSSLDGSDSSSSS
NTRGSRSSNTSSSRGGGKALTAAAAAGAAAAAAAAAVGVKSGGGRGGREG
GQGEAAVLLGQRGVLLLLLLLFYRRGEGSSSSSSSTTNTSLNTSSSSSSN
PFRTAFDSLKDERYQYEEEDVDEEAAAVPMAGARAAAAAAGGGKEGVASR
QLQLPFDKLFAALARSLPQGEPAPLLFYSLLVSPNPLFLSCTLAQSDVDT
LLLPLLHQLYHPAASSSPSSSSSSSSSSSSSFTGSSLPPSLPPSPRPLYL
LLTLLLLLSQDSAFNSALFRRLFLPSVPWYRERMLARTSLGSLSLLCLLR
VLLFAIQTPLPPRPHEHQHQQCHLQPHSQLESVSSSSSSGDGSRLYLLST
TSAILLNLSAQAEHIHGYASLRLVHVLLLLLRRYVQFAERLSSSSSSPSS
VSSSSSPVPAGAATAPSPQPSSSSPTLPSHHHSASNSSSYSSSSSSSSNS
CNNTNGTHHPSYPTSSSSSSTDDDPSLTHALLSTALRAILSFFTIALSPP
LLPTNLSLIHSLLYSRHHLEPLLSHPSIRALASASFPPSLPHALHSIQGE
GEGEGGSEVGLGIVPEVLLFFGRLFDETEETLSVDKAMLLLEKGAREWQG
RKEGGREGGLGPGGEMAIDPELKFTYEEEAEAEAFFVPYIWEIVHAKTKE
DVWWITPCISAFTPPLPPSLPPSLPPSAPSAPPEEGKGVVRKFLAGAMGV
VPSSLTSLSSSSSSQQRQRQEQPAYGSTGSRGDSSSRASPPPVVVTMHV* back to top
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