NO18G00680, NO18G00680 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G00680 vs. NCBI_GenBank
Match: EWM23278.1 (Ankyrin repeat-containing domain protein [Nannochloropsis gaditana]) HSP 1 Score: 337.0 bits (863), Expect = 5.500e-89 Identity = 166/225 (73.78%), Postives = 186/225 (82.67%), Query Frame = 0 Query: 69 YVRADGIHLNYDPYTPEMRSKYGAPGQTDREGFDPYADRVGPGIYGGHVKRDECGRVIYGEQYQNHNPRPGPVYAGGGYTPIVQALGLGQKALEELLDACPEAVNEVSTGGATPLHMAGMSKRNQEMTEILIRRGGNIEAVDTYGYRPLHRMASNNLAVGAKALLKAGADPKAIAG----------TGE-GVGRRDKGETPMAVARSAGAWDVVQVLLPYYSPSS 283 YVRADG+ +NYDPYTPEMR+KYGAPG+TD EGFDPY+D VGPGIYGG+VKRD G+++ G+QYQ HNPRPGPVYAGGGY PIV+A+ LG AL +LLDACPEAVNEV+TGGATPLHMAGMS+RNQ+ T LI RGG+IEAVDTYGYRPLHRMASNNLAVGA ALL AGADPKA AG GE V + GETPM VARSAGAWDVVQ+LLPYY+ S Sbjct: 71 YVRADGVRMNYDPYTPEMRAKYGAPGRTDSEGFDPYSDSVGPGIYGGNVKRDADGKIVVGDQYQGHNPRPGPVYAGGGYAPIVEAMRLGPDALNDLLDACPEAVNEVTTGGATPLHMAGMSQRNQKGTAFLIARGGDIEAVDTYGYRPLHRMASNNLAVGAAALLDAGADPKAPAGIKRRYANAGNKGETDVEDTESGETPMDVARSAGAWDVVQLLLPYYTSGS 295
BLAST of NO18G00680 vs. NCBI_GenBank
Match: XP_005839669.1 (hypothetical protein GUITHDRAFT_84668 [Guillardia theta CCMP2712] >EKX52689.1 hypothetical protein GUITHDRAFT_84668 [Guillardia theta CCMP2712]) HSP 1 Score: 270.8 bits (691), Expect = 4.900e-69 Identity = 130/211 (61.61%), Postives = 159/211 (75.36%), Query Frame = 0 Query: 67 SPYVRADGIHLNYDPYTPEMRSKYGAPGQTDREGFDPYADRVGPGIYGGHVKRDECGRVIYGEQYQNHNPRPGPVYAGGGYTPIVQALGLGQKALEELLDACPEAVNEVSTGGATPLHMAGMSKRNQEMTEILIRRGGNIEAVDTYGYRPLHRMASNNLAVGAKALLKAGADPKAIAGTGEGVGRRDKGETPMAVARSAGAWDVVQVLLPY 278 S Y R DG+ + +DPY+P M KYGAPG+TD +GFDPYAD VGPGIYGG VKRD G+V+ G QYQNHNPRPGP+Y+G GYT + +AL G +A+++LL+ P V+E+STGGATPLHMAGMS++NQ TE+LI GGNIEA DTYGYRPLHRMASNNL +GA+ALLKAGAD G R GETP+++AR + A V+ VL Y Sbjct: 26 SQYYRKDGVRIVHDPYSPGMADKYGAPGETDSDGFDPYADTVGPGIYGGKVKRDAQGKVLIGRQYQNHNPRPGPIYSGEGYTEMSRALSSGPEAVKKLLELDPSLVHEISTGGATPLHMAGMSRKNQLSTELLIASGGNIEAEDTYGYRPLHRMASNNLDIGAEALLKAGAD---------GAARTQSGETPLSIARQSSAKGVISVLNKY 227
BLAST of NO18G00680 vs. NCBI_GenBank
Match: CEM29744.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 255.8 bits (652), Expect = 1.600e-64 Identity = 123/209 (58.85%), Postives = 147/209 (70.33%), Query Frame = 0 Query: 69 YVRADGIHLNYDPYTPEMRSKYGAPGQTDREGFDPYADRVGPGIYGGHVKRDECGRVIYGEQYQNHNPRPGPVYAGGGYTPIVQALGLGQKALEELLDACPEAVNEVSTGGATPLHMAGMSKRNQEMTEILIRRGGNIEAVDTYGYRPLHRMASNNLAVGAKALLKAGADPKAIAGTGEGVGRRDKGETPMAVARSAGAWDVVQVLLPY 278 Y R DG+ + +DPY M YGA G TD EGFDPYAD VGPGIYGG VK+DE G V+YG QYQNHNP PGPVYAGGGY PI++AL G++A+EE+L P A+ E +TGGA PLHM GMS+RNQ MTE L+ +G + VDTYGY PLHRMASNNLA+GA+ALL+ G P G ETPM++AR + A DV+ VL Y Sbjct: 55 YYRKDGVRIQHDPYAKGMAEHYGAQGNTDPEGFDPYADTVGPGIYGGKVKKDEKGEVVYGRQYQNHNPNPGPVYAGGGYAPIIEALSKGKEAVEEILAISPSALEEETTGGARPLHMCGMSQRNQLMTEFLLDKGADPNVVDTYGYTPLHRMASNNLAIGARALLERGVSPTQPTKHGH--------ETPMSIARGSAARDVIAVLQEY 255
BLAST of NO18G00680 vs. NCBI_GenBank
Match: EJK74063.1 (hypothetical protein THAOC_04284 [Thalassiosira oceanica]) HSP 1 Score: 233.4 bits (594), Expect = 8.600e-58 Identity = 117/211 (55.45%), Postives = 145/211 (68.72%), Query Frame = 0 Query: 64 TTKSPYVRADGIHLNYDPYTPEMRSKYGAPGQTDREGFDPYADRVGPGIYGGHVKRDECGRVIYGEQYQNHNPRPGPVYAGGGYTPIVQALGLGQKALEELLDACPEAVNEVSTGGATPLHMAGMSKRNQEMTEILIRRGGNIEAVDTYGYRPLHRMASNNLAVGAKALLKAGADPKAIAGTGEGVGRRDKGETPMAVARSAGAWDVVQVL 275 T Y R DG+ + +DP+ P M KYG PG+TD EGFDPYAD VG GIYGG VKRD G ++ G QYQ HNPRPGPVY+GGGYTP + L + L+ LL P+ VN+V+TGGA PLHM GMSK Q L+ RG +IEA+DTYG+ PLHRMASNNLA GA+ LL+AGAD ++ TG+ G TPM++AR + A V++VL Sbjct: 3 TGAEDYYRHDGVRITHDPFAPGMAEKYGLPGKTDNEGFDPYADSVGAGIYGGIVKRDADGEIVIGRQYQGHNPRPGPVYSGGGYTPSTKMLTDIEGQLKPLLGRFPDLVNDVTTGGAQPLHMCGMSKSKQHAVSELVVRGADIEALDTYGFTPLHRMASNNLAEGARMLLEAGAD---VSSTGKA------GATPMSIARESRATAVMKVL 204
BLAST of NO18G00680 vs. NCBI_GenBank
Match: XP_002502598.1 (hypothetical protein MICPUN_113339, partial [Micromonas commoda] >ACO63856.1 hypothetical protein MICPUN_113339, partial [Micromonas commoda]) HSP 1 Score: 223.8 bits (569), Expect = 6.800e-55 Identity = 118/222 (53.15%), Postives = 140/222 (63.06%), Query Frame = 0 Query: 67 SPYVRADGIHLNYDPYTPEMRSKYGAPGQTDREGFDPYADRVGPGIYGGHVKRDECGRVIYGEQYQNHNPRPGPVYAGGGYTPIVQALGL-----------GQKALEELLDACPEAVNEVSTGGATPLHMAGMSKRNQEMTEILIRRGGNIEAVDTYGYRPLHRMASNNLAVGAKALLKAGADPKAIAGTGEGVGRRDKGETPMAVARSAGAWDVVQVLLPY 278 S Y R DG+ + +DPY P M +KYGAPG+TD +GFDPYAD VG GIY G V+R G V+ G QYQ HNPRPGPVY+GGGYTPI +A+ L +LLDA P+ VN+V+TGGA+PLH GMS+ NQ T LI RG ++ A+DTYGY PL RMASNNLAVGA ALL GA+P D P VA A A DV+ VL Y Sbjct: 37 SSYYRKDGVKITHDPYAPGMAAKYGAPGKTDADGFDPYADSVGAGIYSGTVQRAADGSVVIGRQYQGHNPRPGPVYSGGGYTPISEAISRFHAEMRSGAAETDTTLAKLLDAHPDLVNDVATGGASPLHTCGMSRSNQHATAFLIARGADLAAMDTYGYTPLDRMASNNLAVGAAALLAFGAEP-------------DAHGPPFDVAMDAEAKDVLAVLEKY 245
BLAST of NO18G00680 vs. NCBI_GenBank
Match: XP_003061638.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH54268.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 218.4 bits (555), Expect = 2.900e-53 Identity = 118/237 (49.79%), Postives = 146/237 (61.60%), Query Frame = 0 Query: 64 TTKSPYVRADGIHLNYDPYTPEM--------------RSKYGAPGQTDREGFDPYADRVGPGIYGGHVK-RDECGRVIYGEQYQNHNPRPGPVYAGGGYTPIVQALG-----------LGQKALEELLDACPEAVNEVSTGGATPLHMAGMSKRNQEMTEILIRRGGNIEAVDTYGYRPLHRMASNNLAVGAKALLKAGADPKAIAGTGEGVGRRDKGETPMAVARSAGAWDVVQVL 275 + K+ + RADG+ + +DP+ P M R KYGAPG+TDR+GFDPYAD VG GIYGG VK R E G V+ G+QYQ HNPRPGPVYAGGGYTP+ A+ + L +LLDA P+ VN+VSTGGA+PLH GMS+ NQ T LI RG +++AVD YG+ PL R ASNNLA+ A+ALLK GADP D P VA + A DV++ L Sbjct: 5 SAKAAHYRADGVRITHDPHAPGMAEVHSIHWSPYDRVRVKYGAPGETDRDGFDPYADSVGAGIYGGVVKRRPEDGSVVIGKQYQGHNPRPGPVYAGGGYTPVSDAIATFNREVSGGVPTPETTLAKLLDAHPDLVNDVSTGGASPLHTCGMSRANQHATAFLISRGADVDAVDAYGFTPLDRAASNNLAIAAEALLKRGADP-------------DANGPPRDVATQSEARDVLKAL 228
BLAST of NO18G00680 vs. NCBI_GenBank
Match: GAX11066.1 (hypothetical protein FisN_2Lh603 [Fistulifera solaris]) HSP 1 Score: 210.7 bits (535), Expect = 6.000e-51 Identity = 97/174 (55.75%), Postives = 126/174 (72.41%), Query Frame = 0 Query: 66 KSPYVRADGIHLNYDPYTPEMRSKYGAPGQTDREGFDPYADRVGPGIYGGHVKRDECGRVIYGEQYQNHNPRPGPVYAGGGYTPIVQALGLGQKALEELLDACPEAVNEVSTGGATPLHMAGMSKRNQEMTEILIRRGGNIEAVDTYGYRPLHRMASNNLAVGAKALLKAGADP 240 ++ Y RADG+ + +DPY P M KYG PG+T+ EGFDPYAD VGPGIYGG V+R E G ++ G+QYQNHN R GPVY G GY+ + +A+ G + ++ +L PE E+STGGA PLHM GMS++ Q T+ LI G ++ A DTYGY P+HRMASNNLA+G +AL +AG DP Sbjct: 6 ENEYYRADGVRITHDPYAPGMAEKYGLPGETNPEGFDPYADTVGPGIYGGSVERYEDGTIVIGQQYQNHNHRLGPVYDGRGYSLMSRAIHAGPEKVKAILADYPELREEISTGGARPLHMCGMSQKGQLCTQALIDAGADLHAQDTYGYTPMHRMASNNLAIGGEALARAGVDP 179
BLAST of NO18G00680 vs. NCBI_GenBank
Match: GAX13058.1 (hypothetical protein FisN_2Hh603 [Fistulifera solaris]) HSP 1 Score: 210.3 bits (534), Expect = 7.800e-51 Identity = 103/208 (49.52%), Postives = 140/208 (67.31%), Query Frame = 0 Query: 66 KSPYVRADGIHLNYDPYTPEMRSKYGAPGQTDREGFDPYADRVGPGIYGGHVKRDECGRVIYGEQYQNHNPRPGPVYAGGGYTPIVQALGLGQKALEELLDACPEAVNEVSTGGATPLHMAGMSKRNQEMTEILIRRGGNIEAVDTYGYRPLHRMASNNLAVGAKALLKAGADPKA-IAG---TGEGVGRRDKGETPMAVARSAGAWD 270 ++ Y RADG+ + +DPY P M KYG PG+T+ +GFDPYAD VGPGIYGG V+R++ G ++ G+QYQNHN RPGPVY G GY+ + +A+ G ++ +L E E+STGGA PLHM GMS++ Q T+ LI G ++ A DTYGY P+HRMASNNLA+G +AL +AG DP A I G T + +R + + V + G +D Sbjct: 6 ENEYYRADGVRITHDPYAPGMAEKYGLPGETNPDGFDPYADTVGPGIYGGSVERNKDGTIVIGQQYQNHNHRPGPVYDGRGYSLMSRAIHAGPDKVKAILADYLELREEISTGGARPLHMCGMSQKGQLCTQALIDAGADLHAQDTYGYTPMHRMASNNLAIGGEALARAGVDPNARIEGADSTAIEIAKRSRSIQFLMVMQKLGLYD 213
BLAST of NO18G00680 vs. NCBI_GenBank
Match: XP_002291424.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91531.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 209.5 bits (532), Expect = 1.300e-50 Identity = 109/199 (54.77%), Postives = 136/199 (68.34%), Query Frame = 0 Query: 86 MRSKYGAPGQTDREGFDPYADRVGPGIYGGHVKR-DECGRVIYGEQYQNHNPRPGPVYAGGGYTPIVQALGLGQKALEELLDACPEAVNEVSTGGATPLHMAGMSKRNQEMTEILIRRGGNIEAVDTYGYRPLHRMASNNLAVGAKALLKAGADPKAIAGTGEGVGRRDKGETPMAVARSAGAWDVVQVLLPYYSPSSS 284 M KYG PG+TD EGFDPY D VG GIYGG V+R E G ++ G+QYQNHNPRPGPVYAGGGYTP ALG Q+ L LLD P+ VN+++TGGA PLHM GMS+ Q + L+ RG +IEA+DTYG PLHRMASNNLA GA+ LL+AGAD + G+ G +PM++A+ + A V VL + +S+ Sbjct: 1 MADKYGRPGKTDDEGFDPYRDSVGAGIYGGIVQRHSETGEIVIGQQYQNHNPRPGPVYAGGGYTPCTLALGDVQRKLIPLLDKYPDLVNDITTGGAQPLHMCGMSQGKQHSVQALVERGADIEALDTYGMTPLHRMASNNLADGARMLLEAGAD---VFNEGK------IGISPMSIAKGSAARAVTNVLYEFAKLNST 190
BLAST of NO18G00680 vs. NCBI_GenBank
Match: OEU20036.1 (hypothetical protein FRACYDRAFT_217021 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 206.1 bits (523), Expect = 1.500e-49 Identity = 105/205 (51.22%), Postives = 131/205 (63.90%), Query Frame = 0 Query: 69 YVRADGIHLNYDPYTPEMRSKYGAPGQTDREGFDPYADRVGPGIYGGHVKRDECGRVIYGEQYQNHNPRPGPVYAGGGYTPIVQALGLGQKALEELLDACPEAVNEVSTGGATPLHMAGMSKRNQEMTEILIRRGGNIEAVDTYGYRPLHRMASNNLAVGAKALLKAGADP----KAIAGTGEGVGRRDKGETPMAVARSAGAWD 270 + R DG+ ++YDPY M KYG PG TD EGFDPYAD VG GIYGG VKRD G ++ GEQYQNHN RPGPVY G GY+ + +A+ G + + E+L PE E+STGGA PLHM GMS NQ T+ LI ++ A DTYGY LHRMASNNL VG +AL++AG DP + T + RR +G + + G +D Sbjct: 3 HYRKDGVKIDYDPYAKGMAEKYGLPGNTDNEGFDPYADSVGAGIYGGCVKRDNEGNIVIGEQYQNHNNRPGPVYDGRGYSLMSKAIHAGPEKVTEILKDYPELKEEISTGGARPLHMCGMSSNNQLSTQSLIDAKADLYAQDTYGYTALHRMASNNLDVGGEALVRAGHDPNMKMEGADSTPIEIARRSRGIQFLMKMQELGHYD 207 The following BLAST results are available for this feature:
BLAST of NO18G00680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 18 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00680 ID=NO18G00680|Name=NO18G00680|organism=Nannochloropsis oceanica|type=gene|length=1781bpback to top protein sequence of NO18G00680.1 >NO18G00680.1-protein ID=NO18G00680.1-protein|Name=NO18G00680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=284bpback to top Synonyms
Publications
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