NO18G00560, NO18G00560 (gene) Nannochloropsis oceanica

Overview
NameNO18G00560
Unique NameNO18G00560
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3521
Alignment locationchr18:231057..234577 -

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Properties
Property NameValue
DescriptionS-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:231057..234577 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR010719rRNA_methylase
Homology
BLAST of NO18G00560 vs. NCBI_GenBank
Match: CEM35425.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 170.2 bits (430), Expect = 1.400e-38
Identity = 93/204 (45.59%), Postives = 122/204 (59.80%), Query Frame = 0
Query:  240 ASHLALAHSIWGQVLRPGGIAVDATCGNGHDALAIAKFLFPTGVSRGLYGRLHCIDIQESAIAATRQQLVEKAGPPLSDDLSLLDTHVIFHRQNYREFPLSIRDNSVSLLVYNLGYLPGQEDKRRPTMAEDTLESLRQALFIRPILATHGLISLTCYRGHPEGAKEAAAVQDFVEGLDPLTFRCFVHSPLNRPLSPTVITIYRL 444
            ASHL L+  +W Q L+PGG AVDATCGNG D+L ++  +FP+         L CID+Q  AI +TR  L E+  PP  + + L      FH Q++  FP  I DNSV ++VYNLGYLPG  DK   T  + T+ SL  AL    ++   GLIS+  YRGHPEG  E+  V  +   L    +R F+H PLNRP SP ++T+YRL
Sbjct:   13 ASHLPLSRLLWKQGLKPGGRAVDATCGNGKDSLFLSTLIFPSDGDDETEAELICIDVQREAIGSTRSLLAEELRPPHLERIRL------FH-QSHERFPDCIADNSVDVIVYNLGYLPG-GDKSVTTRHDTTITSLTAAL---KLIVKGGLISVMLYRGHPEGTVESDGVISWASQLPADEWRVFLHEPLNRPTSPALMTLYRL 205          
BLAST of NO18G00560 vs. NCBI_GenBank
Match: CBN76462.1 (methylase-related [Ectocarpus siliculosus])

HSP 1 Score: 154.8 bits (390), Expect = 6.100e-34
Identity = 89/209 (42.58%), Postives = 127/209 (60.77%), Query Frame = 0
Query:  235 RMNAAASHLALAHSIWGQVLRPGGIAVDATCGNGHDALAIAKFLFPTGVSRGLYGRLHCIDIQESAIAATRQQLVEKAGPPLSDDLSLLDTHVIFHRQNYREFPLSIRDNSVSLLVYNLGYLPGQEDKRRPTMAEDTLESLRQALFIRPILATHGLISLTCYRGHPEGAKEAAAVQDFVEGLDPLTFRCFVHSPLNRPLSPTVITIYRL 444
            R N AASH  +AH +W QV  PG   +D T GNGHD+L +AK +    +  G+ G L+ +D+QE AI ATR++L  + G     +L+L  + +I    N+RE P  +   SV L+VYNLG+LPG  DK   T  EDTLES+  A   + ++   G+IS+  YRGH EG +E  AV+D+  GL    +R F+H  +NR  SP ++TI++L
Sbjct:  258 RNNPAASHSHMAHLLWRQVAGPGDTVLDCTAGNGHDSLELAKIV---ALKDGV-GSLYVMDVQERAIEATRERLRSELG-----ELALKRSTLI--NGNFREMPAELEPLSVQLVVYNLGWLPG-GDKSITTKLEDTLESIEAA---KRVVKHGGMISVMLYRGHAEGKRETEAVRDYAAGLAHSQWRVFMHERINRADSPELLTIFKL 451          
BLAST of NO18G00560 vs. NCBI_GenBank
Match: PJD98172.1 (rRNA methyltransferase [Parachlamydia sp.])

HSP 1 Score: 146.7 bits (369), Expect = 1.700e-31
Identity = 85/202 (42.08%), Postives = 115/202 (56.93%), Query Frame = 0
Query:  241 SHLALAHSIWGQVLRPGGIAVDATCGNGHDALAIAKFLFPTGVSRGLYGRLHCIDIQESAIAATRQQLVEKAGPPLSDDLSLLDTHVIFHRQNYREFPLSIRDNSVSLLVYNLGYLPGQEDKRRPTMAEDTLESLRQALFIRPILATHGLISLTCYRGHPEGAKEAAAVQDFVEGLDPLTFRCFVHSPLNRPLSPTVITIYR 443
            SHL LAH  W  ++RPG   +DATCGNGHD L +A+    +       G++  ID+QE ++ AT  +L+E   P L   + L+ +        +  FP  I   SV L+VYNLGYLP + DK R T A+ T+ESL+ A    P+L   G+I +TCY GH EG KE  AV DFV GLDP  + C     +NR  +P ++ I R
Sbjct:   10 SHLDLAHQYWTILVRPGDTVIDATCGNGHDTLKLAQLALHSD-----QGQVIGIDLQEQSLLATNARLMEHLSPDLLRRVQLICS-------CHSSFP-DIPPKSVRLIVYNLGYLP-KGDKSRTTRAKTTIESLQAAF---PLLMPGGVICVTCYPGHEEGEKEEKAVLDFVRGLDPHEWCCTYQQWMNRQKAPGLLLIQR 194          
BLAST of NO18G00560 vs. NCBI_GenBank
Match: OJV11625.1 (rRNA methyltransferase [Chlamydiales bacterium 38-26])

HSP 1 Score: 145.6 bits (366), Expect = 3.700e-31
Identity = 80/203 (39.41%), Postives = 114/203 (56.16%), Query Frame = 0
Query:  241 SHLALAHSIWGQVLRPGGIAVDATCGNGHDALAIAKF-LFPTGVSRGLYGRLHCIDIQESAIAATRQQLVEKAGPPLSDDLSLLDTHVIFHRQNYREFPLSIRDNSVSLLVYNLGYLPGQEDKRRPTMAEDTLESLRQALFIRPILATHGLISLTCYRGHPEGAKEAAAVQDFVEGLDPLTFRCFVHSPLNRPLSPTVITIYR 443
            SHL +AHS W  +++ G + +DATCGNG D L +A+  L PT       G L+ IDIQ+ A+  T Q L +   P     +SL++       Q + +FP  I   SV L+ YNLGYLPG  +K   T  E TLESL++ALF   ++   G +S+T Y GHPEG +E   +  + + L P  + C  H  +NR  SP+++ I R
Sbjct:   11 SHLDVAHSYWNTLVKKGDVVIDATCGNGQDTLILAQLSLTPT------QGYLYGIDIQQRAVEITHQYLKQHLAPAFLARISLIN-------QCHSDFPQEISPESVRLITYNLGYLPGGGNKNLTTRVETTLESLKKALF---LIQKGGAVSITLYPGHPEGQREEEKILLWAKELSPFQWNCCHHQWINRFKSPSLLLIQR 197          
BLAST of NO18G00560 vs. NCBI_GenBank
Match: WP_013181883.1 (rRNA methyltransferase [Waddlia chondrophila] >ADI38165.1 putative rRNA methylase [Waddlia chondrophila WSU 86-1044] >CCB91142.1 hypothetical rRNA methylase [Waddlia chondrophila 2032/99])

HSP 1 Score: 143.7 bits (361), Expect = 1.400e-30
Identity = 76/202 (37.62%), Postives = 113/202 (55.94%), Query Frame = 0
Query:  241 SHLALAHSIWGQVLRPGGIAVDATCGNGHDALAIAKFLFPTGVSRGLYGRLHCIDIQESAIAATRQQLVEKAGPPLSDDLSLLDTHVIFHRQNYREFPLSIRDNSVSLLVYNLGYLPGQEDKRRPTMAEDTLESLRQALFIRPILATHGLISLTCYRGHPEGAKEAAAVQDFVEGLDPLTFRCFVHSPLNRPLSPTVITIYR 443
            SH+ LAH  W  +++PG I +DATCGNGHD L +A+            G+L+  D+Q+ AI +T+Q L+EK    + +        + F    +  FP  I+ NSV L  YNLGYLPG  DK + T  E TL+S+++AL     +   G++S+TCY GH EG +E   + +F   LDP  +    H  LNR  +P+++ I +
Sbjct:   10 SHIDLAHKHWKSLVKPGDIVIDATCGNGHDTLVLAQLALTVE-----SGKLYACDLQKDAINSTKQSLLEKLEKKIVE-------RIFFVHGCHSSFPDEIQPNSVRLAAYNLGYLPG-GDKAKTTQTETTLQSIQKAL---EAVQDGGMVSITCYPGHTEGKREEKHILEFASKLDPKRWSLCHHRWLNRSKAPSLLLIQK 195          
BLAST of NO18G00560 vs. NCBI_GenBank
Match: WP_088206239.1 (rRNA methyltransferase [Chlamydiales bacterium SCGC AG-110-P3] >SCA63812.1 Putative rRNA methylase YtqB [Chlamydiales bacterium SCGC AG-110-P3])

HSP 1 Score: 138.3 bits (347), Expect = 5.900e-29
Identity = 82/203 (40.39%), Postives = 110/203 (54.19%), Query Frame = 0
Query:  241 SHLALAHSIWGQVLRPGGIAVDATCGNGHDALAIAKFLFP-TGVSRGLYGRLHCIDIQESAIAATRQQLVEKAGPPLSDDLSLLDTHVIFHRQNYREFPLSIRDNSVSLLVYNLGYLPGQEDKRRPTMAEDTLESLRQALFIRPILATHGLISLTCYRGHPEGAKEAAAVQDFVEGLDPLTFRCFVHSPLNRPLSPTVITIYR 443
            SHL LAH  W + L P  I +DATCGNGHDALA+A+ + P  G    L   LH IDIQE+AI +  + L ++   P    +        ++ Q++ E P       VS ++YNLGYLPG  DK   TM E TL SL QA+    ++   G +S+TCY GH  G  E  A+ D+   LD   + C  H   NRP +P++  I R
Sbjct:   10 SHLDLAHHNWARRLCPNDIVIDATCGNGHDALALAQLVIPKKGAQSPL---LHIIDIQENAIDSGYRCLEQQLTAPQMKAIH-------WYSQSHAELPTEKLPGPVSAVIYNLGYLPG-GDKTVTTMTESTLPSLMQAI---DLVKPGGFVSITCYPGHEAGYIEEVAILDWTHTLDRKEYSCCHHQWTNRPGAPSLFLIQR 198          
BLAST of NO18G00560 vs. NCBI_GenBank
Match: CCB89272.1 (hypothetical rRNA methylase [Simkania negevensis Z])

HSP 1 Score: 136.0 bits (341), Expect = 2.900e-28
Identity = 80/203 (39.41%), Postives = 114/203 (56.16%), Query Frame = 0
Query:  241 SHLALAHSIWGQVLRPGGIAVDATCGNGHDALAIAKFLFPTGVSRGLYGRLHCIDIQESAIAATRQQLVEKAGPPLSDDLSLLDTHVIFHRQNYREFPLSIRDNSVSLLVYNLGYLPGQEDKRRPTMAEDTLESLRQALFIRPILATHGLISLTCYRGHPEGAKEAAAVQDFVEGLDPLTFRCFVHSPLNRPLSPTVITIYRL 444
            SH+ LAH  W   L+PG   +DATCGNG+D+LA+A+          + G + CIDIQE AI ATR++L +   P +   ++       +H  ++  FP      + SL+VYNLGYLPG  DK   T A +TL+SL++AL    +L   G I LTCY GHP G +E   +  F + L+   F    H  +NR  SP+++ I +L
Sbjct:   13 SHIELAHQYWKSFLKPGDFVIDATCGNGYDSLALAQM---------VSGHVLCIDIQERAINATREKLKKNLTPSIFKVIT-------YHLGSHEHFP--PLKAAPSLIVYNLGYLPG-SDKTVVTDAFETLKSLKEAL---SLLKPGGAICLTCYVGHPGGEEEEKMLLSFSKSLNKNDFNVCYHQWINRLKSPSLLLIQKL 193          
BLAST of NO18G00560 vs. NCBI_GenBank
Match: WP_006340136.1 (methyltransferase domain-containing protein [Parachlamydia acanthamoebae] >EFB42657.1 hypothetical protein pah_c004o195 [Parachlamydia acanthamoebae str. Hall's coccus] >CCB86869.1 hypothetical rRNA methylase [Parachlamydia acanthamoebae UV-7])

HSP 1 Score: 136.0 bits (341), Expect = 2.900e-28
Identity = 78/202 (38.61%), Postives = 116/202 (57.43%), Query Frame = 0
Query:  241 SHLALAHSIWGQVLRPGGIAVDATCGNGHDALAIAKFLFPTGVSRGLYGRLHCIDIQESAIAATRQQLVEKAGPPLSDDLSLLDTHVIFHRQNYREFPLSIRDNSVSLLVYNLGYLPGQEDKRRPTMAEDTLESLRQALFIRPILATHGLISLTCYRGHPEGAKEAAAVQDFVEGLDPLTFRCFVHSPLNRPLSPTVITIYR 443
            SHL +AH+ W +++ PG   +DATCGNGHD L +AK +  +       G +  +D+Q  AIAATR++L ++     ++ +  L  H   H      FP+   +NSV L+VYNLGYLP + DK   T    TL SL+ AL    ++A  G +SLTCY GH EG +E  A+ +FV+ L P  + C   + +NR  +P ++ I +
Sbjct:   10 SHLDVAHNHWKKLVNPGDTVIDATCGNGHDTLILAKLVLDSS-----SGCVIGMDVQPQAIAATREKLAKELS---ANQMERLHLHCACH----SIFPIQ-TENSVQLIVYNLGYLP-KSDKSLTTCVNTTLISLQAAL---SLIAPGGAVSLTCYPGHEEGKREEEAILNFVQKLRPQEWSCSYQTWVNRQKAPGLLLIQK 194          
BLAST of NO18G00560 vs. NCBI_GenBank
Match: WP_041419374.1 (methyltransferase domain-containing protein [Simkania negevensis])

HSP 1 Score: 136.0 bits (341), Expect = 2.900e-28
Identity = 80/203 (39.41%), Postives = 114/203 (56.16%), Query Frame = 0
Query:  241 SHLALAHSIWGQVLRPGGIAVDATCGNGHDALAIAKFLFPTGVSRGLYGRLHCIDIQESAIAATRQQLVEKAGPPLSDDLSLLDTHVIFHRQNYREFPLSIRDNSVSLLVYNLGYLPGQEDKRRPTMAEDTLESLRQALFIRPILATHGLISLTCYRGHPEGAKEAAAVQDFVEGLDPLTFRCFVHSPLNRPLSPTVITIYRL 444
            SH+ LAH  W   L+PG   +DATCGNG+D+LA+A+          + G + CIDIQE AI ATR++L +   P +   ++       +H  ++  FP      + SL+VYNLGYLPG  DK   T A +TL+SL++AL    +L   G I LTCY GHP G +E   +  F + L+   F    H  +NR  SP+++ I +L
Sbjct:    4 SHIELAHQYWKSFLKPGDFVIDATCGNGYDSLALAQM---------VSGHVLCIDIQERAINATREKLKKNLTPSIFKVIT-------YHLGSHEHFP--PLKAAPSLIVYNLGYLPG-SDKTVVTDAFETLKSLKEAL---SLLKPGGAICLTCYVGHPGGEEEEKMLLSFSKSLNKNDFNVCYHQWINRLKSPSLLLIQKL 184          
BLAST of NO18G00560 vs. NCBI_GenBank
Match: WP_059061345.1 (methyltransferase domain-containing protein [Candidatus Protochlamydia naegleriophila] >CUI17206.1 putative rRNA methylase [Candidatus Protochlamydia naegleriophila])

HSP 1 Score: 133.3 bits (334), Expect = 1.900e-27
Identity = 74/202 (36.63%), Postives = 111/202 (54.95%), Query Frame = 0
Query:  241 SHLALAHSIWGQVLRPGGIAVDATCGNGHDALAIAKFLFPTGVSRGLYGRLHCIDIQESAIAATRQQLVEKAGPPLSDDLSLLDTHVIFHRQNYREFPLSIRDNSVSLLVYNLGYLPGQEDKRRPTMAEDTLESLRQALFIRPILATHGLISLTCYRGHPEGAKEAAAVQDFVEGLDPLTFRCFVHSPLNRPLSPTVITIYR 443
            SHL LAH  W ++L+PG  A+DATCGNGHD L + +            G ++ +D Q  AI  T+  L +   P   + + L+          + +FP SI   S+ L+VYNLGYLPG  DK   T    TL SL++AL    ++   G IS+TCY GH EGA+E  A+ ++++ L PL +    H  +NR  +P+++ + +
Sbjct:   10 SHLDLAHHYWSKLLKPGDRAIDATCGNGHDTLKLCQLALCQS-----EGEIYALDRQSEAIENTKAYLNQNLLPSQIEHIHLI-------LGCHSQFPASITPTSIKLIVYNLGYLPG-GDKAETTETSTTLLSLQEAL---NLVVPGGAISVTCYPGHLEGAREEEAILEWIKTLSPLEWSACHHKWINRRHAPSLLLLQK 195          
The following BLAST results are available for this feature:
BLAST of NO18G00560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CEM35425.11.400e-3845.59unnamed protein product [Vitrella brassicaformis C... [more]
CBN76462.16.100e-3442.58methylase-related [Ectocarpus siliculosus][more]
PJD98172.11.700e-3142.08rRNA methyltransferase [Parachlamydia sp.][more]
OJV11625.13.700e-3139.41rRNA methyltransferase [Chlamydiales bacterium 38-... [more]
WP_013181883.11.400e-3037.62rRNA methyltransferase [Waddlia chondrophila] >ADI... [more]
WP_088206239.15.900e-2940.39rRNA methyltransferase [Chlamydiales bacterium SCG... [more]
CCB89272.12.900e-2839.41hypothetical rRNA methylase [Simkania negevensis Z... [more]
WP_006340136.12.900e-2838.61methyltransferase domain-containing protein [Parac... [more]
WP_041419374.12.900e-2839.41methyltransferase domain-containing protein [Simka... [more]
WP_059061345.11.900e-2736.63methyltransferase domain-containing protein [Candi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR041ngnoR041Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G00560.1NO18G00560.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G00560.1NO18G00560.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G00560 ID=NO18G00560|Name=NO18G00560|organism=Nannochloropsis oceanica|type=gene|length=3521bp
ATGGCTGTCCCTCCCCCGCCCTCCTCCTCCTCCTCCTCCACCCCTTCCTT
GGCTACCGAGTCAGTATCCCCTCCATCCGCGCTAGGAGATGCGAAAGgtc
cgtgcttttacccctccctccctccctccctccctccctcccttccttcc
ttcctcaccctttcttactccttacccactcaaagatcgtccatgcactc
atccaatgtcccttccctccctccctccctccctccctcccttccttcct
ctctccaccagGCCTACATAGAAGGAGAGGAACCCATCTCTTGCCCACGC
CGCTCACCTCCGCCAATCCTTTAGGCTTCCGTTGCTTTCTCCTCTTCATC
CTCGTACTGCTTTCAATAGgtacgcctccagggagggagggagggaggga
gggagggaaggacatatggacagcgaagtagttgaagtttccatattttt
cttcccccccgcctacttcattgatcgcaccccctccctcccaccctccc
tccctcccttctcatcaccacagGCGGGACCCAAGCCTTTCGCCTCGCGG
CTGCCCTTCGCTCCCTGACCATAACGGCGGCAAAGAGGGGAGGGCTGGAA
GGAGGGGCAGGGATGGCGGCGGGTTGCTATCAATATAACACAATCAGgta
ggaaaggaaggaagatgtgagggagggagggagggagggaaggaaggaac
tgtgatgtcgcgcgggataaaagctgaattcatgatcctccctccctccc
tccctccctcccttcccccccccctctctcattctctgtttagAATGCTG
GGTGGGACGGCCGTACACGGGAGAAGCAGCAGCAGCAGCAGCAGCAGCAG
TAGTGGTGGTGGTGGGGCTTCGTCCTTGCCCTCTTCCTCGCCCTCCTCCC
CTCCCTCTTCCAGCACCTCCAGTCTGTTTGCCTCGGGCCGCGCATCGACC
GTCAGAGAAGAGGAGGAGGAGCGGCAGGAGGAGCAGGAGGAAGACGAAGA
GAAGGAAGAAGACGGAGCGAGAGAAGAGAGGGAAGAAGAGGAGGAAAGGA
GGGAAGCGAGGGAGGTGCCATACGGGGGAGGGGAGCAGGACGGGGAGGAG
GGCGGTCCTATCCCGACGGAGGAGgtagggagggagggagggagggaggg
agggagggagggagggagggagggagggagggaggaaagaggaccttgct
gggcgtcgcggagagctggtcagattgatgcaggaggactcatcgaccct
ccgtccctccgtccctccctctgtcccttcctccgtccctccctccgtcc
ctccgtccctgcagGAGTTACAAGCGATCGTGGCCCAGCGAGGGCAGGAG
CTGGTGAGGATGAACGCCGCCGCTTCCCACTTGGCACTGGCACACTCGAT
ATGGGGACAGgtaggtagggagggagggcgggagggagggcgggtttgac
cgactgaccacatgaccaccacctcgtgcactttcctgagagctcatcca
ttctcctccctccctccctccctccgtccctgtctagccccccccaggag
ctcaaggcctcaggtcaatgtaaacccccagctgtcactcacccttccct
ccctccctccctccctccctccctccctccctcccttcctccccccccag
GTCCTCAGGCCGGGTGGCATTGCCGTTGACGCCACTTGCGGTAACGGCCA
CGATGCCCTGGCCATAGCCAAgtgaggagggagggagggagggaagaagg
gagggagagaaggagggagggagggagggcgctgagacgcgccggagtct
ctgaagttgccatcattataatgtccatctcatttatttatatatagatt
tctattctttgtaatcgtaatttcactctatcttaaataatattatgtat
tatcattgtaacacgttcatagATTTCTATTTCCCACGGGCGTCTCTCGA
GGCCTTTACGGCCGACTTCATTGCATCGACATCCAGgtaccctccctccc
ttattccctccctccctccctccctccctccctccctccctccctccctt
cctcccttgatcctccctccctccctccctccctccctcccttgatcctc
cctccctccccccctccctccttccgtcctttccactaaccttccctccc
tccctccctccctccctccctcccttcctaagGAATCTGCCATCGCTGCC
ACACGCCAGCAGCTGGTCGAGAAGGCCGGTCCTCCCCTTAGCGACGACCT
CTCCCTCCTCGACACCCACGTCATCTTCCACCGGCAAAACTACCGGgtac
atgccttccctccctccccctccctccctccctccctccctccctccctc
cctccctccctccctccctccctccctccctccttccctccttccctccc
tccctccctccttccctccctccctccctccctccctccctccctccccc
ttgcgttcgcctccttgagcccgttcaaacgtcgcctctcaacttcccct
ccttccctgccctccctccccccctccctttcagGAATTTCCCCTTTCCA
TCCGCGACAACTCCGTCTCCCTTCTCGTCTACAATCTCGGCTACCTCCCC
GGCCAAGAAGACAAACGCCGACCGACAATGGCCGAGGACACCCTCGAGAG
CCTCCGTCAGgtatgccctccctccctccctccctccctccctcccttcc
tccctgccgcccaccttcccgcccgtccgtatgacaaccctttccctccc
tccctccttccttctctccctcccttcctccctcccctcagGCCCTCTTT
ATTCGTCCCATCCTGGCCACCCATGGGTTGATCTCCTTGACGTGCTATAG
AGGTCACCCGGAAGGCGCAAAGGAAGCCGCAGCCGTGCAAGATTTCGTGG
AGgtgagggagggagggagggagggagggagcgagggagggagggagaga
ggaagggagggaggaacaagaaagatgttgttgggagctcaggagtgaag
agagtcatgtgggtgagtgggcacgatggggaaggaggaaggaagggagg
gaaggagggaaggaggaaaatgtttttcaccctctctcttcccttctctt
acttgctcctgctcatccctccctctctccctccctctcccgttctcagG
GGTTGGATCCTCTGACCTTCCGCTGTTTTGTTCATTCGCCGCTGAATCGG
CCTTTATCTCCCACGGTGATCACCATCTATAGACTCAAGTAGGGAGGGAG
GGAGGGAGAAAAGAAGGAACCATATATATTGAATGACTGACGTAGAAAGA
GGAGCAAGGAGGGAGGGAAGAAGGAGGGGAGGAAGGAAGGGATGGAGGGA
GGGAGGAAAGGTATTAGGGGATGCACGGGGGGGGCTTTCATTACGGTAGA
CGTAGCGTTTATTACGGTAGACGTAATGTGTATGTTCTTTGTCCTTGCGT
GTGTTAGTGGGCATATCGGGTTGACCTGAGGGAGAGGGGGGGATGCGGAT
GCTGGATGGGTGTCTGATTGT
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protein sequence of NO18G00560.1

>NO18G00560.1-protein ID=NO18G00560.1-protein|Name=NO18G00560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=445bp
MAVPPPPSSSSSSTPSLATESVSPPSALGDAKGLHRRRGTHLLPTPLTSA
NPLGFRCFLLFILVLLSIGGTQAFRLAAALRSLTITAAKRGGLEGGAGMA
AGCYQYNTIRMLGGTAVHGRSSSSSSSSSSGGGGASSLPSSSPSSPPSSS
TSSLFASGRASTVREEEEERQEEQEEDEEKEEDGAREEREEEEERREARE
VPYGGGEQDGEEGGPIPTEEELQAIVAQRGQELVRMNAAASHLALAHSIW
GQVLRPGGIAVDATCGNGHDALAIAKFLFPTGVSRGLYGRLHCIDIQESA
IAATRQQLVEKAGPPLSDDLSLLDTHVIFHRQNYREFPLSIRDNSVSLLV
YNLGYLPGQEDKRRPTMAEDTLESLRQALFIRPILATHGLISLTCYRGHP
EGAKEAAAVQDFVEGLDPLTFRCFVHSPLNRPLSPTVITIYRLK*
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Synonyms
Publications