NO18G00480, NO18G00480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G00480 vs. NCBI_GenBank
Match: XP_002506022.1 (predicted protein [Micromonas commoda] >ACO67280.1 predicted protein [Micromonas commoda]) HSP 1 Score: 153.3 bits (386), Expect = 2.500e-33 Identity = 92/270 (34.07%), Postives = 149/270 (55.19%), Query Frame = 0 Query: 58 RLHLRLKTP-TAEEHEKIETLREAVRQTPFWSHPQHRTWLTDSTLLRFLIARDFSIEKAMEMLSTALTWRGLREPYALTASQPQVQEQGATGKIYNAGFD-RWRRPVVIFNNSVNNSNDTTAQMRYLAYNLETALRRAKRLHPEEDVSKFVIFMHMTDFSLFNCPPFKVTRETIQIVTTCFPETMGHCVIFNPPFAFSAFFDSVKRFIDKRTASKIVMLSGDVSEGSVNDLAMKELLGNDWKALTGADQARLREGCSPGFDPSSYWPSLV 326 R+H L +P A +HE L E + P W +RFL AR+ +I+KA +M+S L WR P+ +T + +++ Q TGK+ G D R RPV++F++S NS D Q+R L Y++ + RA R +P ++ K+++F+H+ DF L P K + T+ ++ FPE +G +++ PP F+A VK F+ + T +KI+ ++G+V GS ND M+ + G+DW+ LTGA + SPG+D + W +V Sbjct: 81 RVHEWLASPDRAGKHEDDPELDEIL-------DPSGDAW------IRFLRARNGNIDKAFKMMSNHLAWRCDYRPWTITPA--EIEHQNVTGKVRMGGLDSRDGRPVLVFDDSKENSKDHAMQLRSLVYHV-CRVDRACRRNP--NLGKYLLFIHLRDFKLSKAPGRKQSTNTLSLLQDQFPERLGRAILYKPPTVFAAMLSMVKPFMTEVTRNKIIAVTGNVDAGSKNDSKMRGIAGDDWRELTGATMPQSSPEISPGYDHARAWAEVV 332
BLAST of NO18G00480 vs. NCBI_GenBank
Match: XP_009034158.1 (hypothetical protein AURANDRAFT_6155, partial [Aureococcus anophagefferens] >EGB11047.1 hypothetical protein AURANDRAFT_6155, partial [Aureococcus anophagefferens]) HSP 1 Score: 142.9 bits (359), Expect = 3.400e-30 Identity = 78/165 (47.27%), Postives = 106/165 (64.24%), Query Frame = 0 Query: 118 MLSTALTWRGLREPYALTASQPQVQEQGATGKIYNA-GFDRWRRPVVIFNNSVNNSNDTTAQMRYLAYNLETALRRAKRLHPEEDVSKFVIFMHMTDFSLFNCPPFKVTRETIQIVTTCFPETMGHCVIFNPPFAFSAFFDSVKRFIDKRTASKIVMLS-GDVSE 281 +L AL WRG R P+ + +++ + TGK+ A DRW RPVV+F+N+V N+ D+ AQ+R LA+ LE ALRR VSK+VIFMH++DFSLFN PP+ VTRET+ ++ +CF E GH V+ P F F +VK ID +TA+KIV +S GD E Sbjct: 1 LLLDALAWRGRRRPHVI--DYAEMERESRTGKLRVAESLDRWGRPVVVFDNTVQNTKDSAAQLRCLAFVLEHALRRVDGTR----VSKYVIFMHLSDFSLFNNPPWSVTRETMLMLMSCFAECCGHIVVHGAPRVFRGVFAAVKPLIDPKTATKIVFVSPGDAEE 159
BLAST of NO18G00480 vs. NCBI_GenBank
Match: XP_005790740.1 (hypothetical protein EMIHUDRAFT_224687 [Emiliania huxleyi CCMP1516] >EOD38311.1 hypothetical protein EMIHUDRAFT_224687 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 137.5 bits (345), Expect = 1.400e-28 Identity = 86/258 (33.33%), Postives = 130/258 (50.39%), Query Frame = 0 Query: 98 DSTLLRFLIARDFSIEKAMEMLSTALTWRGLREPYAL-----TASQPQVQEQGATGKIY-NAGFDRWRRPVVIFNNSVNNSNDT-TAQMRYLAYNLETALRRAKRLH----------------PEEDVSKFVIFMHMTDFSLFNCPPFKVTRETIQIVTTCFPETMG-------HCVIFNPPFAFSAFFDSVKRFIDKRTASKIVMLSGDVSEGSVNDLAMKELLGNDWKALTGADQARLREGCSPGFDPSSYWPSLV 326 D R+L+AR +++ A +ML AL WR R P +A ++ +G GK+Y G D R V++ +NSV S + A MRY A+ ++ ALR+A+ P D VI +H FSL N PP +ET++++ FPE+ G H +++ PP FS + + ID + SK+ +SG V++GS ND M+ L G+ WK L G +Q + GC+ GF+P SYW +V Sbjct: 48 DLACCRYLVARGWAVPPAADMLHAALLWRVRRSPPGPLCDLDSADGAFLRLEGGRGKVYVPDGVDCHGRGVLVLDNSVQRSGSSLQASMRYFAFCIQLALRQAELARARGGGEGGAPAPGLQAPPPDKLLIVIKLHR--FSLLNSPPPSHAKETLEMLMNHFPESAGLAVACPRHIIVYRPPRVFSGLWAFSAKLIDAKMRSKVHFISGSVADGSANDALMRRLAGDGWKQLCGCEQPFVSPGCTEGFEPDSYWRGVV 303
BLAST of NO18G00480 vs. NCBI_GenBank
Match: XP_005765424.1 (hypothetical protein EMIHUDRAFT_247204 [Emiliania huxleyi CCMP1516] >EOD12995.1 hypothetical protein EMIHUDRAFT_247204 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 129.4 bits (324), Expect = 3.900e-26 Identity = 82/272 (30.15%), Postives = 129/272 (47.43%), Query Frame = 0 Query: 98 DSTLLRFLIARDFSIEKAMEMLSTALTWRGLREPYAL-----TASQPQVQEQGATGKIY-NAGFDRWRRPVVIFNNSVNNSNDT-TAQMRYLAYNLETALRRAKRLHPE--------------EDVSKFVIFMHMTDFSLFNCPPFKVTRETIQIVTTCFPE-----------------------TMGHCVIFNPPFAFSAFFDSVKRFIDKRTASKIVMLSGDVSEGSVNDLAMKELLGNDWKALTGADQARLREGCSPGFDPSSYWPSLV 326 D R+L+AR +++ A +ML AL WR R P +A ++ +G GK+Y G D R V++ +NSV S + A MRY A+ ++ ALR+A+ +I + + FSL N PP +ET++++ FPE ++GH +++ PP FS + + ID + SK+ +SG V++GS ND M+ L G+ WK L G +Q + GC+ GF+P SYW +V Sbjct: 48 DLACCRYLVARGWAVPPAADMLHAALLWRVRRSPPGPLCDLDSADGAFLRLEGGRGKVYVPDGVDCHGRGVLVLDNSVQRSGSSLQASMRYFAFCIQLALRQAELARARGXXXXXXXXXXXXXXXXXXLLIVIKLHRFSLLNSPPPSHAKETLEMLMNHFPESAGLAVACPRRASSPLPRGVSSLSLGHIIVYRPPRVFSGLWAFSAKLIDAKMRSKVHFISGSVADGSANDALMRRLAGDGWKQLCGCEQPFVSPGCTEGFEPDSYWRGVV 319
BLAST of NO18G00480 vs. NCBI_GenBank
Match: XP_002457612.1 (random slug protein 5 [Sorghum bicolor] >XP_021312920.1 random slug protein 5 [Sorghum bicolor] >EES02732.1 hypothetical protein SORBI_3003G121800 [Sorghum bicolor]) HSP 1 Score: 124.4 bits (311), Expect = 1.300e-24 Identity = 72/209 (34.45%), Postives = 118/209 (56.46%), Query Frame = 0 Query: 66 PTAEEHEKIETLREAVRQTPFWSHPQHRTWLTDSTLLRFLIARDFSIEKAMEMLSTALTWRGLREPYALTASQPQVQEQGATGKIYNAGF-DRWRRPVVIFNNSVNNSNDTTAQMRYLAYNLETALRRAKRLHPEEDVSKFVIFMHMTDFS--LFNCPPFKVTRETIQIVTTCFPETMGHCVIFNPPFAFSAFFDSVKRFIDKRTASKI 272 P E+ EKI LR+ + S P + +L+D++L RFL AR+++++KA +M+ A+ WR +P + + E+ TGKIY A + D+ R V++ + N+ T Q++YL Y+LE A+ ++ ED K V +TDF P KVTRET+ ++ C+PE +G +++NPP F +F+ VK F+D+ T K+ Sbjct: 18 PLEEQQEKINELRKVLGD---HSSPAIQDFLSDASLARFLRARNWNVQKASKMMKAAVKWRLAFKPENI--CWDDISEEAETGKIYRADYKDKHGRTVLVLRPGLENTTSATGQIKYLVYSLEKAI-----MNLTEDQEKMV---WLTDFQSWTLGSTPLKVTRETVNVLQDCYPERLGLAILYNPPRIFESFWKIVKPFLDQETRKKV 213
BLAST of NO18G00480 vs. NCBI_GenBank
Match: XP_005704767.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein isoform 1 [Galdieria sulphuraria] >EME28247.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein isoform 1 [Galdieria sulphuraria]) HSP 1 Score: 121.3 bits (303), Expect = 1.100e-23 Identity = 63/204 (30.88%), Postives = 108/204 (52.94%), Query Frame = 0 Query: 69 EEHEKIETLREAVRQTPFWSHPQHRTWLTDSTLLRFLIARDFSIEKAMEMLSTALTWR-GLREPYALTASQPQVQEQGATGKIYNAGFDRWRRPVVIFNNSVNNSNDTTAQMRYLAYNLETALRRAKRLHPEEDVSKFVIFMHMTDFSLFNCPPFKVTRETIQIVTTCFPETMGHCVIFNPPFAFSAFFDSVKRFIDKRTASKI 272 E + +++LR V + W D+ LLR+L AR+ ++KA+E++ L WR + PQV+E+G++ K+Y G D++ RP++ N+ ++ Q+++L Y LE A+RR + V K ++F+ +S+ N P K+ RET+ ++ +PE +G + N P F F+ +K FIDK T KI Sbjct: 25 ETKQCLQSLRSKVNSILVDGSSKDVEWCDDACLLRYLRARNNQVDKALELVRRTLEWRKNFEVEELMNKVPPQVKEEGSSQKLYVGGKDKYGRPIIYMKPKYQNTKESIHQLQHLVYTLEKAIRRM-----QNGVEKLILFIDFEGYSMRNTPSIKMMRETLTVLQDYYPERLGLAICLNAPTLFYTFYKIIKPFIDKNTVQKI 223
BLAST of NO18G00480 vs. NCBI_GenBank
Match: XP_004364555.1 (hypothetical protein CAOG_01687 [Capsaspora owczarzaki ATCC 30864] >KJE90365.1 hypothetical protein CAOG_001687 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 120.6 bits (301), Expect = 1.800e-23 Identity = 71/222 (31.98%), Postives = 116/222 (52.25%), Query Frame = 0 Query: 56 VPRLHLRLKTPTAEEHEKIETLREAVRQTPFWSHPQHRTWLTDSTLLRFLIARDFSIEKAMEMLSTALTWRGLREPYALTASQPQVQEQGATGKIYNAGFDRWRRPVVIFNNSVNNSNDTTAQMRYLAYNLETALRRAKRLHPEEDVSKFVIFMHMTDFSLFNCPPFKVTRETIQIVTTCFPETMGHCVIFNPPFAFSAFFDSVKRFIDKRTASKIVMLSGD 278 VPR+ L T + + IE L+E + P W+ Q R L R+L ARD+ +EKA +++ LTWR + + ++ P + E+G TGK Y G DR RP++ N+ + Q+RY ++LE A+ R+ LH E V + + + +S+ N PP T+E + I+ C+PE +G ++ + PF F+ + V F+ T KI +SG+ Sbjct: 64 VPRVAL-----TPSQVQAIEQLQEKL-NVPGWTVRQWRYIHEGGCLARYLRARDWDVEKAHQLMLGTLTWREEFKVHEISPEDPLIVEEGLTGKTYRHGRDRAGRPIIYMKPRFQNTKNYAEQVRYTVHHLEQAM-RSMNLH--EGVEQMTLLIDFQGYSVMNAPPMSQTKEVMSILLNCYPERLGLALMVDAPFLFNMAYKVVYPFLPTETRKKIHFISGN 276
BLAST of NO18G00480 vs. NCBI_GenBank
Match: XP_003566739.1 (phosphatidylinositol transfer protein 3 [Brachypodium distachyon] >XP_010230745.1 phosphatidylinositol transfer protein 3 [Brachypodium distachyon] >KQK03773.1 hypothetical protein BRADI_2g09760v3 [Brachypodium distachyon]) HSP 1 Score: 120.6 bits (301), Expect = 1.800e-23 Identity = 74/221 (33.48%), Postives = 123/221 (55.66%), Query Frame = 0 Query: 64 KTPTAEE-HEKIETLREAVRQTPFWSHPQHRTWLTDSTLLRFLIARDFSIEKAMEMLSTALTWRGLREPYALTASQPQVQEQGATGKIYNAGF-DRWRRPVVIFNNSVNNSNDTTAQMRYLAYNLETALRRAKRLHPEEDVSKFVIFMHMTDFS--LFNCPPFKVTRETIQIVTTCFPETMGHCVIFNPPFAFSAFFDSVKRFIDKRTASKIVMLSGDVSE 281 KT T EE +KI+ LR+ + + S + +L+D+++LRFL AR+++++KA +ML A+ WR +P + S + + TGKIY A + D+ R V++ + N+ Q++YL Y+LE A+ ++ +D K V +TDF P KVTRET+ ++ C+PE +G +++NPP F +F+ VK F+D T K+ + D E Sbjct: 15 KTMTVEEQQQKIDELRKQLGEP---SSVAIQGFLSDASILRFLRARNWNVQKASKMLKAAVKWRAAYKPEMI--SWEDIAHEAETGKIYRADYKDKLGRTVLVLRPGLENTTSGKEQIKYLVYSLEKAI-----MNLTDDQEKMV---WLTDFQGWTMGSTPLKVTRETVNVLQDCYPERLGLAILYNPPRLFESFWKIVKPFLDHETYKKVKFVYSDDKE 222
BLAST of NO18G00480 vs. NCBI_GenBank
Match: BAK00108.1 (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 118.6 bits (296), Expect = 6.900e-23 Identity = 67/209 (32.06%), Postives = 120/209 (57.42%), Query Frame = 0 Query: 64 KTPTAEEHEKIETLREAVRQTPFWSHPQHRTWLTDSTLLRFLIARDFSIEKAMEMLSTALTWRGLREPYALTASQPQVQEQGATGKIYNAGF-DRWRRPVVIFNNSVNNSNDTTAQMRYLAYNLETALRRAKRLHPEEDVSKFVIFMHMTDFSLFNCPPFKVTRETIQIVTTCFPETMGHCVIFNPPFAFSAFFDSVKRFIDKRTASKI 272 KT T EE + E + E +Q S + +L+D+++LRFL AR+++++K+ +ML +A+ WR +P + S ++ + TGKIY A + D+ R V++ + N+ Q++YL Y+LE A+ ++ +D K V + +++ P KVTRET+ ++ C+PE +G +++NPP F +F+ VK F+D T+ K+ Sbjct: 15 KTLTLEEQQ--EKINEVRKQLEEPSSLAIQGFLSDASILRFLRARNWNVQKSSKMLKSAVKWRAAYKPEMI--SWEEIAHEAETGKIYRADYKDKLGRTVLVLRPGLENTTSGKEQIKYLVYSLEKAI-----MNLTDDQEKMVWMIDFQGWTM-GSTPLKVTRETVSVLQDCYPERLGLAILYNPPRLFESFYKIVKPFLDHETSKKV 213
BLAST of NO18G00480 vs. NCBI_GenBank
Match: XP_005539546.1 (SEC14 protein [Cyanidioschyzon merolae strain 10D] >BAM83510.1 SEC14 protein [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 118.6 bits (296), Expect = 6.900e-23 Identity = 77/226 (34.07%), Postives = 116/226 (51.33%), Query Frame = 0 Query: 68 AEEHEKIETLREAVRQTPFWS-HPQHRTWLTDSTLLRFLIARDFSIEKAMEMLSTALTWR---GLREPYALTASQPQVQEQGATGKIYNAGFDRWRRPVVIFNNSVNNSNDTTA---QMRYLAYNLETALRRAKRLHPEEDVSKFVIFMHMTDFSLFNCPPFKVTRETIQIVTTCFPETMGHCVIFNPPFAFSAFFDSVKRFIDKRTASKIVMLSGDVSEGSVNDL 287 A + K+E L E VR + P + W+ ++ L RFL AR + ++KA L + WR G+ E L V+ Q TGK+Y G DR+ RP V + N+++ QMR L Y LE A+ A+ + P V K + + +SL N P KV R+T++I+ +PE +G V + P F FF+ VK FID+RT++KI S EG+ ++ Sbjct: 49 AAQRAKLEALSELVRSAAELNLTPTEKAWMDEACLSRFLRARRYHVQKAFRQLHETIVWRRSFGV-EQLMLDPELADVKRQSETGKLYVHGKDRFGRPAVFMKPRLQNTSERKTAHEQMRQLVYTLERAV--AEMMPP---VEKICLVIDFPGYSLRNAPSIKVQRQTLKILQDYYPERLGFAVCIDAPAIFWTFFEIVKPFIDRRTSAKIQFCSRKAKEGTKQNM 268 The following BLAST results are available for this feature:
BLAST of NO18G00480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00480 ID=NO18G00480|Name=NO18G00480|organism=Nannochloropsis oceanica|type=gene|length=4075bpback to top protein sequence of NO18G00480.1 >NO18G00480.1-protein ID=NO18G00480.1-protein|Name=NO18G00480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=638bpback to top Synonyms
Publications
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