NO18G00430, NO18G00430 (gene) Nannochloropsis oceanica

Overview
NameNO18G00430
Unique NameNO18G00430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2282
Alignment locationchr18:181476..183757 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:181476..183757 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO18G00430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR050ncniR050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR043ngnoR043Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO18G00430.1NO18G00430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO18G00430.1NO18G00430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO18G00430 ID=NO18G00430|Name=NO18G00430|organism=Nannochloropsis oceanica|type=gene|length=2282bp
ATGGATGCTCTGACCAAGACGATACAAGAGCATCGCCGCCTCGCCTTCTG
CTTCTGCTTTTTTCTGGCTGCTGCCTTGTCGGGCGATACGGTTATCGTCG
gtatgcttttcctcctcgcttgatcccatgcttcgttccctgtacagtac
ctggcacctccccttccaacgagaggtatgtaacgtcaatgaataattgc
ggcgcttcgtcccttgcgcgtagtttcccttatcgttgctgccccccgct
tgcacatcttgcttctcctacctcctacccccccaaaagtttggtaattt
tgtgctcgctttcgtatcgctcccacacgcaaaaagacaactctcccacg
atcgtgtggaagcattctcctattagatagttggaatgagaagcacatgc
ttggctataccttcctgacctttccaccttctcttcgtgggcttgtcaca
catctgtaactctctcttcccttcccctaaacccaatagCAGCAACCGCT
GCAGGCGCCGCTGCTGTTTCTCCCTACAGACACGCCATGTTCCTAGCACA
GACAACAAACATGTCAGCCATGAAGACGCACTCGACGAGCAGCAACTGTC
GCAGCACgtacgtagagttccacctcctcttccttaacttgccctctttg
tctcaatccgttccctctcccttacattcctcccgtcaactttatcctac
ctcctctcctcctatctcttcggtaccttccacccgcatcggcagCGGCA
GTAAACGCAGCATCGTCACCAAGGCATGTCAGCTCGCTGAGTCCCATATC
GCCACCATCTTAAGAGAGGTGGGAGGTTGTCCTCCTTTTGGCGTCCATCA
TGGACTGTTGCTGGCCCGACTTGAAGAGAAACTGCAGgtaagagatactg
aagggagatggagaggggcaaggtaaagggcgcatattggctgctgatgc
agagcagtgcgttggttagtgaagtgggagtgcgagcacaggccgtatga
gcaggcgagccacagcggtactattcaccttttctatccctttcatccct
ccctccagGTGAACGTTACTACCGAGGTCCTCTTGGACTTTCTCTCAGAG
TATTACGACCTTGGTGAATGGAAGGCGCTCTATGAAGCCGACACTGTTGA
AGGCAGCGTTCGCCGGGCCTACCTTCCTCCTCCCCTCCCTCCCTCCCTCC
CTCCTACTCGCCCGACTCCTGCCCGGGCGATGGAGGAATTCTCGCCACCG
ATGGCTCGGAAGAAAGAGAGGAGCGAGGGAGGGAGGAGGAAGGGGAGAAA
GAGGAAGGTGATGGGGAACGTAGAGGTAAAGAAGGTTGGGAGGAGGGGAG
GAGGAAAAGGAGTCGTCGAGGGGAAGAGAGGAAAGAGGAAGGGAAGACAC
GGGAAGAAGGAGGAGGAGGTGGTGGAGGAGGAGAGAGAGAAGGAGGGAAA
GAAGGAGGGAGGAAAGGAGGGAAACGTGCGAAGGAGGAGATTGCGTCAGG
ATGTGAGCACAAAGAGGAAGGCGGGTCAGGGAGGGAGGGAGGGAAGGAAG
GAGGAAGAACTCAGGCCGAAGGTCGCGAAGGAGGGAGGGAGGGAGGGAGA
GGTAGAAGGGAAGGTTGTAAAGAGGAAGAGAGGGCGACCGAAGAGAAAAA
AAGTGGAAATGACACGAGGAGGAAGAGTTGGGAGAGAAGAAACATACACC
GGACTGCATGCGCCTCCAGCCCACCACCACCATCACCATCAGGAGCAGGT
GCCGCAGCAGCAGCGACAGGTACGAAGGGTTGGTCAGAAGAGGAAAGGGA
GGAAGAGGAAGGTGCACGATAAGGAGGAGGAGGAGGAGGAGGAGCAGCAG
CAGCAGCGGCAGCATTCGTTCGAGCCACTGTTTGAAAAGACGGAAGGGTT
GCAGAAGAAGCAGGGAGGGAAGGAGGGAGGGATCAAGGGAAGGAGCCGTT
CCCCTGTGCTCTACGGCTCTCCCTCCTCCACTTTTTCCTCTCCGCCTCCA
TTGCTACTAATGCCCGAGGAACACGGGGAGGACGCGGGGAAGGGCGAGGA
GGAGGGCGAGGAGGAGGGCGAGGAGGAGGGCGAGGAGGAGGGCGAGGAGG
AGGGCGAGGAGGAGGGCGAGGAGGGCTCGGCATTTTCCTCGTCGTTCTTT
GTTTTTCCCTTGCAGCACAAGAAGAGGAAGCATGGAGGGAAAGAGGGAAG
AAGGAGACGACGCAAAGGAGGGCAGGAGGAGCCTGAGAGGAAGAGAGAGA
GACAGGCGACGCGGAGCACGGGGAGTGCGTGA
back to top

protein sequence of NO18G00430.1

>NO18G00430.1-protein ID=NO18G00430.1-protein|Name=NO18G00430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=528bp
MDALTKTIQEHRRLAFCFCFFLAAALSGDTVIVAATAAGAAAVSPYRHAM
FLAQTTNMSAMKTHSTSSNCRSTGSKRSIVTKACQLAESHIATILREVGG
CPPFGVHHGLLLARLEEKLQVNVTTEVLLDFLSEYYDLGEWKALYEADTV
EGSVRRAYLPPPLPPSLPPTRPTPARAMEEFSPPMARKKERSEGGRRKGR
KRKVMGNVEVKKVGRRGGGKGVVEGKRGKRKGRHGKKEEEVVEEEREKEG
KKEGGKEGNVRRRRLRQDVSTKRKAGQGGREGRKEEELRPKVAKEGGREG
EVEGKVVKRKRGRPKRKKVEMTRGGRVGREETYTGLHAPPAHHHHHHQEQ
VPQQQRQVRRVGQKRKGRKRKVHDKEEEEEEEQQQQRQHSFEPLFEKTEG
LQKKQGGKEGGIKGRSRSPVLYGSPSSTFSSPPPLLLMPEEHGEDAGKGE
EEGEEEGEEEGEEEGEEEGEEEGEEGSAFSSSFFVFPLQHKKRKHGGKEG
RRRRRKGGQEEPERKRERQATRSTGSA*
back to top
Synonyms
Publications